Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002205.1

Orthogroup ID

OG0011643

Physical Location & Seq

Genomic Coordinates Reverse (-)

8399 .. 11068

Gene Structure 2670 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002205.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2583 bp

ctgttcttgtgtgttaaaaggtacaagagctgctgcagcagtgaaagatactttaagcatcagtactctcattattttcacgctggaacttcccatcgttcgaaagtttttggtgccattcccactaggcaggctcaagaggttacagaagacctgaaatcttccagaagagaagcatccacacttgcagcaatgaaatcacaagctggccctaatccccaggaggactacaaactaaaggacacgaaaccccagcttggggaacgatggccacatggaggagttcgcggtggaggagggtggataagcagcgaaagagctacaagcacttacgaccttgttgagcagatgttctatctctatgttagagttgttaaagccaaaaatcttccaacaaatcctttaacaggaagctgtgatccttacgtagaagtgaagctcggaaattacaagggaaaaacacaccactttgagaagagaacaaaccctgaatggaagcaggtgtttgcattctcaaaagagaagattcagtcttccatacttgaagtatatgtcagagaaaaagacatggtagcaagagatgactatatagggaaagtggtgtttgacatgcatgaagtgccaactagagttccaccggatagccctttggctcctcagtggtatagattagaacaccggacaagcgatagtaaggttagaggagaggttatgcttgcagtttggatgggaacacaggctgatgaagctttcccagaagcttggcactcggatgctgcttcagttcatggagaaggagttttcagcattcggtccaaagtttatgtttcaccaaaactttggtatctcagagtcaatgtaattgaagctcaagatgtggagccgcatgacaaaagccaaacaccacaagcttttgtgaaggttcatgttggaaatcagacactcaagacaaagttatgtccaactaaaacccccaatccaatgtggaatgaagacttgatcttcgtagcagcagagcctttcgaagaactgcttgtacttacggttgaaaacaaagtaagctctgcaaaagatgaacaagtggggaaaataagccttccactgaccatattcgaaaggcgcttggatcacagaccagtccattctcgctggttcaccctcgaaagatttggttttggtgcattggagggagacaagaggcatgagcacaagttctcaaccagagtccatctaagagtctgccttgagggtgcttaccatgttctagatgaatcaaccttatacataagtgatgtgaggcctactgctaggcagctatggaagcagccaattggaattcttgaagtggggatcttaagtgctcaagggcttcttccaatgaagaccaaggatggtaaatcaacaactgatgcttactgtgtagccaagtatgggcagaaatgggtgaggaccagaacaatcatcgaaagcttcagtccgaaatggaatgagcaatacacatgggaggtctatgacccttgcaccgtgatcacactaggagttttcgacaactgccacctgggtggaaatgagaaaccaacttctggcagtggagctaaaaatgactcaagaattggcaaggtaagaatccggttatcaactcttgaaatggataggatttacaccaactcctatccacttcttgttcttcacccatctggattgaaaaagatgggggaactacaactagcagtaaggtttacctgtctctcattagcaaatataatctacctctacggccatcccttgcttcccaaaatgcattacctgcatccattcactgtaaaccagttagatagtctgagatatcaggcaatgaacattgtaggtgccagacttggcagagctgagccaccactaagaaaagaggtggtggagtacatgcttgatgtagattcccacatgtggagcatgagaagaagcaaagccaactttttcagaattgtttcgctcttctctggcctaatctccatgagcaggtggcttggcgaagttcgtcactggaaaaacccaatcactacagttctagttcatgttctgtttgtcctcctgatctgctacccagaattgatcctccctacgatcttcctttacatgtttctcatcggaatatggaatttccgtttccgcccgagagttccacctagtatggatactaaactttcatgggcagaagctgttcacccagatgaaatggatgaagagtttgacaccttccctacatcgaaggcccaagacgtggtgcgaatgaggtatgatagactacgaagtgttgcaggaagaattcaaacggtggttggagacattgcaactcagggggagagattccaggcagtgctcggttggagagacccaagagcaagcagcttgttcgtatttttgtgccttattatcgctgtagtgctctatgtgacacccttcaagatgattgctctgatttccggcatagtttggctacgccaccctagattccgaagcaagctaccttcagtgcccagcaatttcttcagaagactgccatctcgtgctgatagcatgctctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0005215 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005783 GO:0005829 GO:0005886 GO:0005911 GO:0006810 GO:0007154 GO:0007165 GO:0007275 GO:0008104 GO:0008150 GO:0008565 GO:0009314 GO:0009416 GO:0009506 GO:0009510 GO:0009511 GO:0009628 GO:0009648 GO:0009791 GO:0009909 GO:0009911 GO:0009987 GO:0010228 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016021 GO:0019722 GO:0019932 GO:0022414 GO:0023052 GO:0030054 GO:0031224 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0033036 GO:0034613 GO:0035556 GO:0042886 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044432 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0045184 GO:0046872 GO:0048518 GO:0048571 GO:0048573 GO:0048574 GO:0048580 GO:0048582 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051179 GO:0051234 GO:0051239 GO:0051240 GO:0051641 GO:0051716 GO:0055044 GO:0061458 GO:0065007 GO:0070013 GO:0070727 GO:0071702 GO:0071705 GO:0071944 GO:2000026 GO:2000241 GO:2000243

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C2 PRT_C

Protein Analysis

860

Amino Acids

98.79

Weight (kDa)

9.35

Isoelectric Point (pI)

44.04

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011643)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06850
fragaria_vesca	FvH4_6g22780 FvH4_6g22780
malus_domestica	MD12G1062100.v1.1 MD14G1056400.v1.1
prunus_persica	Prupe.7G072800_v2.0.a1
pyrus_communis	pycom12g05490 pycom14g04620
rosa_chinensis	RchiOBHm_Chr3g0480381
rosa_laevigata	RLG00000023487
rosa_multiflora	Rmu_sc0002205.1_g000002 Rmu_sc0003742.1_g000015
rosa_roxburghii	Rroxscaffold_6G00401430
rosa_rugosa	Rorug03G0183500
rosa_samantha	Rh3AG235000 Rh3BG267500 Rh3CG264800 Rh3DG260700
rosa_wichuraiana	Rw3G021090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	490, 2007
Acc36I	ACCTGC	3 cut(s)	490, 1815, 2007
AccB1I	GGYRCC	2 cut(s)	113, 1868
AccB7I	CCANNNNNTGG	2 cut(s)	1583, 2278
AccII	CGCG	1 cut(s)	288
AciI	CCGC	3 cut(s)	288, 884, 2167
AclWI	GGATC	4 cut(s)	413, 1134, 1358, 2104
AcoI	YGGCCR	2 cut(s)	269, 1777
AcsI	RAATTY	3 cut(s)	1335, 2155, 2322
AcuI	CTGAAG	4 cut(s)	765, 1456, 2511, 2530
AfaI	GTAC	4 cut(s)	23, 65, 1038, 1919
AflII	CTTAAG	1 cut(s)	1354
AflIII	ACRYGT	2 cut(s)	1941, 2133
AgsI	TTSAA	8 cut(s)	545, 866, 1049, 1343, 1646, 1705, 2327, 2461
AjiI	CACGTC	1 cut(s)	2278
AjnI	CCWGG	3 cut(s)	219, 1557, 2367
AleI	CACNNNNGTG	1 cut(s)	1560
Alw21I	GWGCWC	4 cut(s)	1209, 1363, 2379, 2445
Alw26I	GTCTC	4 cut(s)	1185, 1751, 2334, 2382
AlwI	GGATC	4 cut(s)	413, 1134, 1358, 2104
AlwNI	CAGNNNCTG	1 cut(s)	2216
Ama87I	CYCGRG	1 cut(s)	2170
AoxI	GGCC	6 cut(s)	208, 269, 1298, 1777, 1999, 2268
ApoI	RAATTY	3 cut(s)	1335, 2155, 2322
ArsI	GACNNNNNNTTYG	2 cut(s)	986, 1018
Asp700I	GAANNNNTTC	2 cut(s)	1984, 2217
AspLEI	GCGC	1 cut(s)	1122
AspS9I	GGNCC	4 cut(s)	209, 813, 1449, 2269
AsuHPI	GGTGA	5 cut(s)	822, 1147, 1456, 1682, 2213
AsuII	TTCGAA	3 cut(s)	101, 1023, 1113
AvaI	CYCGRG	1 cut(s)	2170
AvaII	GGWCC	2 cut(s)	813, 1449
BaeGI	GKGCMC	1 cut(s)	2535
BaeI	ACNNNNGTAYC	2 cut(s)	827, 860
BalI	TGGCCA	1 cut(s)	271
BanI	GGYRCC	2 cut(s)	113, 1868
BauI	CACGAG	1 cut(s)	2562
BbsI	GAAGAC	5 cut(s)	156, 525, 999, 1388, 2557
Bbv12I	GWGCWC	4 cut(s)	1209, 1363, 2379, 2445
BccI	CCATC	9 cut(s)	102, 261, 721, 1236, 1385, 1702, 1705, 1788, 2566
BceAI	ACGGC	1 cut(s)	1792
BcgI	CGANNNNNNTGC	2 cut(s)	2392, 2426
BciT130I	CCWGG	3 cut(s)	221, 1559, 2369
BciVI	GTATCC	1 cut(s)	2185
BclI	TGATCA	1 cut(s)	1527
BcoDI	GTCTC	4 cut(s)	1185, 1751, 2334, 2382
BfaI	CTAG	9 cut(s)	126, 627, 1265, 1308, 1535, 1727, 2066, 2184, 2505
BfmI	CTRYAG	3 cut(s)	34, 2058, 2436
BfoI	RGCGCY	1 cut(s)	1123
BfrI	CTTAAG	1 cut(s)	1354
BfuAI	ACCTGC	3 cut(s)	490, 1815, 2007
BfuI	GTATCC	1 cut(s)	2185
BlpI	GCTNAGC	1 cut(s)	1887
BmcAI	AGTACT	1 cut(s)	65
Bme1390I	CCNGG	3 cut(s)	221, 1559, 2369
Bme18I	GGWCC	2 cut(s)	813, 1449
BmeT110I	CYCGRG	1 cut(s)	2170
BmgBI	CACGTC	1 cut(s)	2278
BmgT120I	GGNCC	4 cut(s)	209, 813, 1449, 2269
BmiI	GGNNCC	4 cut(s)	115, 654, 882, 1870
BmrFI	CCNGG	3 cut(s)	221, 1559, 2369
BmsI	GCATC	5 cut(s)	67, 185, 763, 1399, 1819
BpiI	GAAGAC	5 cut(s)	156, 525, 999, 1388, 2557
Bpu1102I	GCTNAGC	1 cut(s)	1887
Bpu14I	TTCGAA	3 cut(s)	101, 1023, 1113
BpuEI	CTTGAG	6 cut(s)	120, 855, 929, 1265, 1347, 1591
BsaAI	YACGTR	1 cut(s)	427
BsaI	GGTCTC	1 cut(s)	2382
BsaJI	CCNNGG	3 cut(s)	219, 1386, 1558
BsaWI	WCCGGW	3 cut(s)	637, 678, 1629
BsaXI	ACNNNNNCTCC	4 cut(s)	783, 813, 1652, 1682
Bse1I	ACTGG	3 cut(s)	1136, 1828, 2045
Bse3DI	GCAATG	3 cut(s)	198, 1860, 2343
BseBI	CCWGG	3 cut(s)	221, 1559, 2369
BseDI	CCNNGG	3 cut(s)	219, 1386, 1558
BseGI	GGATG	7 cut(s)	176, 732, 778, 1396, 1780, 1810, 2242
BseMI	GCAATG	3 cut(s)	198, 1860, 2343
BseMII	CTCAG	5 cut(s)	671, 862, 1832, 1878, 2366
BseNI	ACTGG	3 cut(s)	1136, 1828, 2045
BseRI	GAGGAG	4 cut(s)	294, 309, 645, 717
BseSI	GKGCMC	1 cut(s)	2535
BseYI	CCCAGC	2 cut(s)	252, 2534
Bsh1236I	CGCG	1 cut(s)	288
BshFI	GGCC	6 cut(s)	210, 271, 1300, 1779, 2001, 2270
BshNI	GGYRCC	2 cut(s)	113, 1868
BsiHKAI	GWGCWC	4 cut(s)	1209, 1363, 2379, 2445
BsiHKCI	CYCGRG	1 cut(s)	2170
BsiSI	CCGG	4 cut(s)	638, 679, 1630, 2481
BsmAI	GTCTC	4 cut(s)	1185, 1751, 2334, 2382
BsmI	GAATGC	2 cut(s)	509, 807
BsnI	GGCC	6 cut(s)	210, 271, 1300, 1779, 2001, 2270
Bso31I	GGTCTC	1 cut(s)	2382
BsoBI	CYCGRG	1 cut(s)	2170
Bsp119I	TTCGAA	3 cut(s)	101, 1023, 1113
Bsp1286I	GDGCHC	5 cut(s)	1209, 1363, 2379, 2445, 2535
Bsp143I	GATC	8 cut(s)	418, 999, 1126, 1350, 1527, 2091, 2109, 2121
Bsp1720I	GCTNAGC	1 cut(s)	1887
BspACI	CCGC	3 cut(s)	288, 884, 2167
BspANI	GGCC	6 cut(s)	210, 271, 1300, 1779, 2001, 2270
BspCNI	CTCAG	5 cut(s)	670, 861, 1833, 1879, 2365
BspFNI	CGCG	1 cut(s)	288
BspLI	GGNNCC	4 cut(s)	115, 654, 882, 1870
BspMAI	CTGCAG	1 cut(s)	38
BspMI	ACCTGC	3 cut(s)	490, 1815, 2007
BspPI	GGATC	4 cut(s)	413, 1134, 1358, 2104
BspQI	GCTCTTC	1 cut(s)	1997
BspT104I	TTCGAA	3 cut(s)	101, 1023, 1113
BspT107I	GGYRCC	2 cut(s)	113, 1868
BspTI	CTTAAG	1 cut(s)	1354
BspTNI	GGTCTC	1 cut(s)	2382
BsrDI	GCAATG	3 cut(s)	198, 1860, 2343
BsrI	ACTGG	3 cut(s)	1136, 1828, 2045
BssECI	CCNNGG	3 cut(s)	219, 1386, 1558
BssMI	GATC	8 cut(s)	418, 999, 1126, 1350, 1527, 2091, 2109, 2121
BssSI	CACGAG	1 cut(s)	2562
BssT1I	CCWWGG	1 cut(s)	1386
Bst2BI	CACGAG	1 cut(s)	2562
Bst2UI	CCWGG	3 cut(s)	221, 1559, 2369
Bst4CI	ACNGT	6 cut(s)	1045, 1418, 1525, 1822, 2062, 2332
Bst6I	CTCTTC	4 cut(s)	163, 470, 1997, 2235
BstAFI	CTTAAG	1 cut(s)	1354
BstAPI	GCANNNNNTGC	2 cut(s)	619, 1807
BstBAI	YACGTR	1 cut(s)	427
BstBI	TTCGAA	3 cut(s)	101, 1023, 1113
BstC8I	GCNNGC	6 cut(s)	132, 208, 717, 2401, 2519, 2576
BstDEI	CTNAG	7 cut(s)	657, 848, 1232, 1841, 1887, 1898, 2352
BstENI	CCTNNNNNAGG	1 cut(s)	405
BstF5I	GGATG	7 cut(s)	176, 732, 778, 1396, 1780, 1810, 2242
BstFNI	CGCG	1 cut(s)	288
BstH2I	RGCGCY	1 cut(s)	1123
BstHHI	GCGC	1 cut(s)	1122
BstKTI	GATC	8 cut(s)	421, 1002, 1129, 1353, 1530, 2094, 2112, 2124
BstMAI	GTCTC	4 cut(s)	1185, 1751, 2334, 2382
BstMBI	GATC	8 cut(s)	418, 999, 1126, 1350, 1527, 2091, 2109, 2121
BstMWI	GCNNNNNNNGC	5 cut(s)	36, 619, 746, 1321, 1807
BstNI	CCWGG	3 cut(s)	221, 1559, 2369
BstNSI	RCATGY	5 cut(s)	613, 1924, 1945, 2137, 2578
BstSCI	CCNGG	3 cut(s)	219, 1557, 2367
BstSFI	CTRYAG	3 cut(s)	34, 2058, 2436
BstSLI	GKGCMC	1 cut(s)	2535
BstSNI	TACGTA	1 cut(s)	427
BstUI	CGCG	1 cut(s)	288
BstV2I	GAAGAC	5 cut(s)	156, 525, 999, 1388, 2557
BstX2I	RGATCY	1 cut(s)	1350
BstXI	CCANNNNNNTGG	3 cut(s)	762, 840, 1562
BstYI	RGATCY	1 cut(s)	1350
BsuI	GTATCC	1 cut(s)	2185
BsuRI	GGCC	6 cut(s)	210, 271, 1300, 1779, 2001, 2270
BtrI	CACGTC	1 cut(s)	2278
BtsCI	GGATG	7 cut(s)	176, 732, 778, 1396, 1780, 1810, 2242
BtsI	GCAGTG	3 cut(s)	46, 1594, 2379
BtsIMutI	CAGTG	8 cut(s)	46, 665, 1100, 1594, 1818, 2038, 2379, 2535
BveI	ACCTGC	3 cut(s)	490, 1815, 2007
Cac8I	GCNNGC	6 cut(s)	132, 208, 717, 2401, 2519, 2576
CaiI	CAGNNNCTG	1 cut(s)	2216
CfoI	GCGC	1 cut(s)	1122
Cfr13I	GGNCC	4 cut(s)	209, 813, 1449, 2269
Csp6I	GTAC	4 cut(s)	22, 64, 1037, 1918
CviQI	GTAC	4 cut(s)	22, 64, 1037, 1918
DdeI	CTNAG	7 cut(s)	657, 848, 1232, 1841, 1887, 1898, 2352
DpnI	GATC	8 cut(s)	420, 1001, 1128, 1352, 1529, 2093, 2111, 2123
DpnII	GATC	8 cut(s)	418, 999, 1126, 1350, 1527, 2091, 2109, 2121
EaeI	YGGCCR	2 cut(s)	269, 1777
Eam1104I	CTCTTC	4 cut(s)	163, 470, 1997, 2235
EarI	CTCTTC	4 cut(s)	163, 470, 1997, 2235
EciI	GGCGGA	1 cut(s)	2156
Eco105I	TACGTA	1 cut(s)	427
Eco130I	CCWWGG	1 cut(s)	1386
Eco147I	AGGCCT	1 cut(s)	1300
Eco31I	GGTCTC	1 cut(s)	2382
Eco32I	GATATC	1 cut(s)	1847
Eco47I	GGWCC	2 cut(s)	813, 1449
Eco57I	CTGAAG	4 cut(s)	765, 1456, 2511, 2530
Eco88I	CYCGRG	1 cut(s)	2170
EcoNI	CCTNNNNNAGG	1 cut(s)	405
EcoRI	GAATTC	2 cut(s)	1335, 2322
EcoRII	CCWGG	3 cut(s)	219, 1557, 2367
EcoRV	GATATC	1 cut(s)	1847
EcoT14I	CCWWGG	1 cut(s)	1386
EcoT22I	ATGCAT	2 cut(s)	615, 1803
ErhI	CCWWGG	1 cut(s)	1386
FalI	AAGNNNNNCTT	4 cut(s)	1017, 1049, 1356, 1388
FbaI	TGATCA	1 cut(s)	1527
FokI	GGATG	7 cut(s)	163, 739, 785, 1403, 1767, 1797, 2249
FspBI	CTAG	9 cut(s)	126, 627, 1265, 1308, 1535, 1727, 2066, 2184, 2505
GlaI	GCGC	1 cut(s)	1121
GsaI	CCCAGC	2 cut(s)	256, 2538
HaeII	RGCGCY	1 cut(s)	1123
HaeIII	GGCC	6 cut(s)	210, 271, 1300, 1779, 2001, 2270
HapII	CCGG	4 cut(s)	638, 679, 1630, 2481
HhaI	GCGC	1 cut(s)	1122
Hin6I	GCGC	1 cut(s)	1120
HinP1I	GCGC	1 cut(s)	1120
HindIII	AAGCTT	4 cut(s)	747, 759, 909, 1468
HpaII	CCGG	4 cut(s)	638, 679, 1630, 2481
HphI	GGTGA	5 cut(s)	822, 1147, 1456, 1682, 2213
Hpy166II	GTNNAC	4 cut(s)	1155, 1740, 1825, 2221
Hpy8I	GTNNAC	4 cut(s)	1155, 1740, 1825, 2221
HpyAV	CCTTC	7 cut(s)	788, 913, 1106, 2260, 2263, 2467, 2535
HpyCH4III	ACNGT	6 cut(s)	1045, 1418, 1525, 1822, 2062, 2332
HpyCH4IV	ACGT	2 cut(s)	426, 2277
HpyF10VI	GCNNNNNNNGC	5 cut(s)	36, 619, 746, 1321, 1807
HpyF3I	CTNAG	7 cut(s)	657, 848, 1232, 1841, 1887, 1898, 2352
HpySE526I	ACGT	2 cut(s)	426, 2277
HspAI	GCGC	1 cut(s)	1120
Ksp22I	TGATCA	1 cut(s)	1527
Kzo9I	GATC	8 cut(s)	418, 999, 1126, 1350, 1527, 2091, 2109, 2121
LguI	GCTCTTC	1 cut(s)	1997
LmnI	GCTCC	4 cut(s)	658, 880, 1592, 1947
LweI	GCATC	5 cut(s)	67, 185, 763, 1399, 1819
MaeI	CTAG	9 cut(s)	126, 627, 1265, 1308, 1535, 1727, 2066, 2184, 2505
MaeII	ACGT	2 cut(s)	426, 2277
MaeIII	GTNAC	3 cut(s)	142, 2036, 2449
MalI	GATC	8 cut(s)	420, 1001, 1128, 1352, 1529, 2093, 2111, 2123
MboI	GATC	8 cut(s)	418, 999, 1126, 1350, 1527, 2091, 2109, 2121
MfeI	CAATTG	1 cut(s)	1329
MflI	RGATCY	1 cut(s)	1350
MhlI	GDGCHC	5 cut(s)	1209, 1363, 2379, 2445, 2535
MlsI	TGGCCA	1 cut(s)	271
MluNI	TGGCCA	1 cut(s)	271
MlyI	GAGTC	4 cut(s)	861, 1233, 1245, 1598
MmeI	TCCRAC	5 cut(s)	416, 910, 986, 2317, 2363
Mox20I	TGGCCA	1 cut(s)	271
Mph1103I	ATGCAT	2 cut(s)	615, 1803
MroXI	GAANNNNTTC	2 cut(s)	1984, 2217
MscI	TGGCCA	1 cut(s)	271
MseI	TTAA	5 cut(s)	15, 54, 375, 404, 1355
MslI	CAYNNNNRTG	3 cut(s)	771, 1560, 2226
Msp20I	TGGCCA	1 cut(s)	271
MspCI	CTTAAG	1 cut(s)	1354
MspI	CCGG	4 cut(s)	638, 679, 1630, 2481
MspR9I	CCNGG	3 cut(s)	221, 1559, 2369
MunI	CAATTG	1 cut(s)	1329
Mva1269I	GAATGC	2 cut(s)	509, 807
MvaI	CCWGG	3 cut(s)	221, 1559, 2369
MvnI	CGCG	1 cut(s)	288
MwoI	GCNNNNNNNGC	5 cut(s)	36, 619, 746, 1321, 1807
NdeII	GATC	8 cut(s)	418, 999, 1126, 1350, 1527, 2091, 2109, 2121
NlaIV	GGNNCC	4 cut(s)	115, 654, 882, 1870
NmuCI	GTSAC	2 cut(s)	2036, 2449
NsiI	ATGCAT	2 cut(s)	615, 1803
NspI	RCATGY	5 cut(s)	613, 1924, 1945, 2137, 2578
NspV	TTCGAA	3 cut(s)	101, 1023, 1113
OliI	CACNNNNGTG	1 cut(s)	1560
PaeI	GCATGC	1 cut(s)	2578
PaqCI	CACCTGC	2 cut(s)	490, 2007
PceI	AGGCCT	1 cut(s)	1300
PciI	ACATGT	2 cut(s)	1941, 2133
PciSI	GCTCTTC	1 cut(s)	1997
PctI	GAATGC	2 cut(s)	509, 807
PdmI	GAANNNNTTC	2 cut(s)	1984, 2217
PfeI	GAWTC	6 cut(s)	526, 1271, 1626, 1934, 2364, 2508
PflMI	CCANNNNNTGG	2 cut(s)	1583, 2278
PleI	GAGTC	4 cut(s)	860, 1232, 1244, 1598
PpsI	GAGTC	4 cut(s)	860, 1232, 1244, 1598
Ppu21I	YACGTR	1 cut(s)	427
PscI	ACATGT	2 cut(s)	1941, 2133
Psp6I	CCWGG	3 cut(s)	219, 1557, 2367
PspFI	CCCAGC	2 cut(s)	252, 2534
PspGI	CCWGG	3 cut(s)	219, 1557, 2367
PspN4I	GGNNCC	4 cut(s)	115, 654, 882, 1870
PspPI	GGNCC	4 cut(s)	209, 813, 1449, 2269
PsrI	GAACNNNNNNTAC	2 cut(s)	1020, 1052
PstI	CTGCAG	1 cut(s)	38
PstNI	CAGNNNCTG	1 cut(s)	2216
PsuI	RGATCY	1 cut(s)	1350
RsaI	GTAC	4 cut(s)	23, 65, 1038, 1919
RsaNI	GTAC	4 cut(s)	22, 64, 1037, 1918
RseI	CAYNNNNRTG	3 cut(s)	771, 1560, 2226
SapI	GCTCTTC	1 cut(s)	1997
SaqAI	TTAA	5 cut(s)	15, 54, 375, 404, 1355
Sau3AI	GATC	8 cut(s)	418, 999, 1126, 1350, 1527, 2091, 2109, 2121
Sau96I	GGNCC	4 cut(s)	209, 813, 1449, 2269
ScaI	AGTACT	1 cut(s)	65
SchI	GAGTC	4 cut(s)	861, 1233, 1245, 1598
ScrFI	CCNGG	3 cut(s)	221, 1559, 2369
SduI	GDGCHC	5 cut(s)	1209, 1363, 2379, 2445, 2535
SfaNI	GCATC	5 cut(s)	67, 185, 763, 1399, 1819
SfcI	CTRYAG	3 cut(s)	34, 2058, 2436
SfuI	TTCGAA	3 cut(s)	101, 1023, 1113
SinI	GGWCC	2 cut(s)	813, 1449
SmiMI	CAYNNNNRTG	3 cut(s)	771, 1560, 2226
SmlI	CTYRAG	7 cut(s)	135, 870, 944, 1244, 1354, 1362, 1606
SmoI	CTYRAG	7 cut(s)	135, 870, 944, 1244, 1354, 1362, 1606
SnaBI	TACGTA	1 cut(s)	427
SphI	GCATGC	1 cut(s)	2578
SseBI	AGGCCT	1 cut(s)	1300
SsiI	CCGC	3 cut(s)	288, 884, 2167
SspMI	CTAG	9 cut(s)	126, 627, 1265, 1308, 1535, 1727, 2066, 2184, 2505
StuI	AGGCCT	1 cut(s)	1300
StyD4I	CCNGG	3 cut(s)	219, 1557, 2367
StyI	CCWWGG	1 cut(s)	1386
TaaI	ACNGT	6 cut(s)	1045, 1418, 1525, 1822, 2062, 2332
TaiI	ACGT	2 cut(s)	429, 2280
TaqI	TCGA	7 cut(s)	101, 1023, 1113, 1161, 1464, 1545, 2264
TaqII	GACCGA	1 cut(s)	801
TatI	WGTACW	3 cut(s)	63, 1036, 1917
TauI	GCSGC	1 cut(s)	886
TfiI	GAWTC	6 cut(s)	526, 1271, 1626, 1934, 2364, 2508
Tru1I	TTAA	5 cut(s)	15, 54, 375, 404, 1355
Tru9I	TTAA	5 cut(s)	15, 54, 375, 404, 1355
TscAI	CASTG	8 cut(s)	46, 665, 1107, 1594, 1825, 2045, 2379, 2535
TseFI	GTSAC	2 cut(s)	2036, 2449
Tsp45I	GTSAC	2 cut(s)	2036, 2449
TspGWI	ACGGA	1 cut(s)	2150
TspRI	CASTG	8 cut(s)	46, 665, 1107, 1594, 1825, 2045, 2379, 2535
Van91I	CCANNNNNTGG	2 cut(s)	1583, 2278
Vha464I	CTTAAG	1 cut(s)	1354
VpaK11BI	GGWCC	2 cut(s)	813, 1449
XagI	CCTNNNNNAGG	1 cut(s)	405
XapI	RAATTY	3 cut(s)	1335, 2155, 2322
XbaI	TCTAGA	1 cut(s)	1264
XceI	RCATGY	5 cut(s)	613, 1924, 1945, 2137, 2578
XmnI	GAANNNNTTC	2 cut(s)	1984, 2217
XspI	CTAG	9 cut(s)	126, 627, 1265, 1308, 1535, 1727, 2066, 2184, 2505
ZrmI	AGTACT	1 cut(s)	65
Zsp2I	ATGCAT	2 cut(s)	615, 1803

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.