Rroxscaffold_6G00401430

Multiple C2 and transmembrane domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
Physical Location & Seq
Forward (+)
23778822 .. 23781212
2391 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00401430.1

Sequence Viewer

Length: 2391 bp
ATGAAATCACAAGCTGGCCCTAATCCCCAGGAGGACTACAAACTAAAGGACACGAAACCCCAGCTTGGGGAACGATGGCCACATGGAGGAGTTCGCGGTGGAGGAGGGTGGATAAGCAGCGAAAGAGCTACAAGCACTTACGACCTTGTTGAGCAGATGTTCTATCTCTATGTTAGAGTTGTTAAAGCCAAAAATCTTCCAACAAATCCTTTAACAGGAAACTGTGATCCTTACGTAGAAGTGAAGCTCGGAAATTACAAGGGAAAAACACACCACTTTGAGAAGAGAACAAACCCTGAATGGAAGCAGGTGTTTGCATTCTCAAAAGAGAAGATTCAGTCTTCCATACTTGAAGTATATGTCAGAGAAAAAGACATGGTAGCAAGAGATGACTATATAGGGAAAGTGGTGTTTGACATGCATGAAGTGCCAACTAGAGTTCCACCGGATAGCCCTTTGGCTCCTCAGTGGTATAGATTAGAACACCGGACAAGCGATACTAAGGTTAGAGGAGAGGTTATGCTTGCAGTTTGGATGGGAACACAGGCGGATGAAGCTTTCCCAGAAGCTTGGCACTCGGATGCTGCTTCAGTTCATGGAGAAGGAGTTTTCAGCATTCGGTCCAAAGTTTACGTTTCACCAAAACTTTGGTATCTCAGAGTCAATGTAATTGAAGCTCAAGATGTGGAGCCGCATGACAAAAGCCAAACACCACAAGCTTTTGTGAAGGTTCATGTTGGAAATCAGACACTCAAGACAAAGTTATGTCCAACTAAAACCCCCAATCCAATGTGGAATGAAGACTTGATCTTCGTAGCAGCAGAGCCTTTCGAAGAACTGCTTGTACTTACGGTTGAAAACAAAGTAAGCTCTGCAAAAGATGAACAAGTGGGGAAAATAAGCCTTCCACTGACCATGTTTGAAAGGCGATTGGATCACAGGCCAGTCCATTCTCGCTGGTTCACCCTCGAAAGATTTGGTTTTGGTGCATTGGAGGGAGACAAGAGGCATGAGCACAAGTTCTCAACCAGAGTCCATCTAAGAGTCTGCCTTGAGGGTGCTTACCATGTTCTAGATGAATCAACCTTGTACATAAGTGATGTGAGGCCTACTGCTAGGCAGCTATGGAAGCAGCCAATTGGGATTCTTGAAGTGGGGATCTTAAGTGCTCAAGGGCTTCTTCCAATGAAGACCAAGGATGGTAAATCAACAACTGATGCTTACTGTGTAGCCAAGTATGGGCAGAAATGGGTGAGGACCAGAACAATCATCGAAAGCTTCAGTCCGAAATGGAATGAGCAATACACATGGGAGGTCTATGACCCTTGCACCGTGATCACACTAGGAGTTTTCGACAACTGCCACCTGGGTGGAAATGAGAAACCAACTTCTGGCAGTGGAGCTAAAAATGACTCAAGAATTGGCAAGGTAAGAATCCGGTTATCAACTCTTGAAATGGATAGGATTTACACCAACTCCTATCCACTTCTTGTTCTTCACCCATCTGGATTGAAAAAGATGGGGGAACTACAACTAGCAGTAAGGTTTACCTGTCTCTCATTAGCAAATATAATCTACCTCTACGGCCATCCCTTGCTTCCCAAAATGCATTACCTGCATCCATTCACTGTAAACCAGTTAGATAGTCTGAGATATCAGGCAATGAACATTGTAGCTGTGAGACTTGGCAGAGCTGAGCCACCACTAAGAAAAGAGGTGGTGGAGTACATGCTTGATGTAGATTCCCACATGTGGAGCATGAGAAGAAGCAAAGCCAACTTTTTCAGAATTGTTTCGCTCTTCTCTGGCCTAATCTCCATGAGCAGGTGGCTTGGCGAAGTTCGTCACTGGAAAAACCCAATCACTACAGTTCTAGTTCATGTTCTGTTTGTCCTACTGATCTGCTACCCAGAATTGATCCTCCCTACGATCTTCCTTTACATGTTTCTCATCGGAATATGGAATTTCCGTTTCCGCCCGAGAGTTCCACCTAGTATGGATACTAAACTTTCATGGGCAGAAGCTGTTCACCCAGATGAAATGGATGAAGAGTTTGACACCTTCCCTACATCGAAGGCCCAAGACGTGGTGCGAATGAGGTATGATAGACTACGAAGTGTTGCAGGAAGAATTCAAACGGTGGTTGGAGACATCGCAACTCAGGGGGAGAGATTCCAGGCAGTGCACAGTTGGAGAGATCCAAGAGCAAGCAGCCTGTTCGTATTTTTGTGCCTTATTATCGCTGTAGTGCTCTATGTGACACCCTTCAAGATGATTGCTCTGATTTCCGGCATAGTTTGGCTACGCCACCCTAGATTCCGAAGCAAGCTACCTTCAGTGCCCAGCAATTTCTTCAGAAGACTGCCATCTCGTGCTGACAGCATGCTCTGA

Protein Analysis

796

Amino Acids

91.56

Weight (kDa)

9.27

Isoelectric Point (pI)

42.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2 PF00168 55 - 160 5.5e-21 C2 domain
C2 PF00168 217 - 323 4.7e-19 C2 domain
C2 PF00168 381 - 496 1.1e-19 C2 domain
PRT_C PF08372 641 - 796 4.4e-78 Plant phosphoribosyltransferase C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011643)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 298, 1815
Acc36I ACCTGC 3 cut(s) 298, 1623, 1815
AccB7I CCANNNNNTGG 2 cut(s) 1391, 2086
AccII CGCG 1 cut(s) 96
AciI CCGC 4 cut(s) 96, 548, 692, 1975
AclWI GGATC 5 cut(s) 221, 942, 1166, 1912, 2192
AcoI YGGCCR 2 cut(s) 77, 1585
AcsI RAATTY 2 cut(s) 1963, 2130
AcuI CTGAAG 4 cut(s) 573, 1264, 2319, 2338
AfaI GTAC 3 cut(s) 846, 1091, 1727
AflII CTTAAG 1 cut(s) 1162
AflIII ACRYGT 2 cut(s) 1749, 1941
AgsI TTSAA 9 cut(s) 353, 674, 857, 923, 1151, 1454, 1513, 2135, 2269
AjiI CACGTC 1 cut(s) 2086
AjnI CCWGG 3 cut(s) 27, 1365, 2175
AleI CACNNNNGTG 1 cut(s) 1368
Alw21I GWGCWC 4 cut(s) 1017, 1171, 2187, 2253
Alw26I GTCTC 4 cut(s) 993, 1559, 1675, 2142
Alw44I GTGCAC 1 cut(s) 2183
AlwI GGATC 5 cut(s) 221, 942, 1166, 1912, 2192
AlwNI CAGNNNCTG 1 cut(s) 2024
Ama87I CYCGRG 1 cut(s) 1978
AoxI GGCC 7 cut(s) 16, 77, 941, 1106, 1585, 1807, 2076
ApaLI GTGCAC 1 cut(s) 2183
ApeKI GCWGC 6 cut(s) 117, 584, 818, 1120, 1132, 2211
ApoI RAATTY 2 cut(s) 1963, 2130
ArsI GACNNNNNNTTYG 2 cut(s) 794, 826
Asp700I GAANNNNTTC 2 cut(s) 1792, 2025
AspS9I GGNCC 4 cut(s) 17, 621, 1257, 2077
AsuHPI GGTGA 5 cut(s) 630, 955, 1264, 1490, 2021
AsuII TTCGAA 1 cut(s) 831
AvaI CYCGRG 1 cut(s) 1978
AvaII GGWCC 2 cut(s) 621, 1257
BaeGI GKGCMC 2 cut(s) 2187, 2343
BaeI ACNNNNGTAYC 4 cut(s) 489, 522, 635, 668
BalI TGGCCA 1 cut(s) 79
BauI CACGAG 1 cut(s) 2370
BbsI GAAGAC 4 cut(s) 333, 807, 1196, 2365
Bbv12I GWGCWC 4 cut(s) 1017, 1171, 2187, 2253
BbvI GCAGC 6 cut(s) 129, 571, 830, 1132, 1144, 2223
BccI CCATC 8 cut(s) 69, 529, 1044, 1193, 1510, 1513, 1596, 2374
BceAI ACGGC 1 cut(s) 1600
BcgI CGANNNNNNTGC 2 cut(s) 2200, 2234
BciT130I CCWGG 3 cut(s) 29, 1367, 2177
BciVI GTATCC 1 cut(s) 1993
BclI TGATCA 1 cut(s) 1335
BcoDI GTCTC 4 cut(s) 993, 1559, 1675, 2142
BfaI CTAG 8 cut(s) 435, 1073, 1116, 1343, 1535, 1874, 1992, 2313
BfmI CTRYAG 2 cut(s) 1866, 2244
BfrI CTTAAG 1 cut(s) 1162
BfuAI ACCTGC 3 cut(s) 298, 1623, 1815
BfuI GTATCC 1 cut(s) 1993
BisI GCNGC 7 cut(s) 118, 585, 692, 819, 1121, 1133, 2212
BlpI GCTNAGC 1 cut(s) 1695
BlsI GCNGC 7 cut(s) 119, 586, 693, 820, 1122, 1134, 2213
Bme1390I CCNGG 3 cut(s) 29, 1367, 2177
Bme18I GGWCC 2 cut(s) 621, 1257
BmeT110I CYCGRG 1 cut(s) 1978
BmgBI CACGTC 1 cut(s) 2086
BmgT120I GGNCC 4 cut(s) 17, 621, 1257, 2077
BmiI GGNNCC 2 cut(s) 462, 690
BmrFI CCNGG 3 cut(s) 29, 1367, 2177
BmsI GCATC 3 cut(s) 571, 1207, 1627
BpiI GAAGAC 4 cut(s) 333, 807, 1196, 2365
Bpu1102I GCTNAGC 1 cut(s) 1695
Bpu14I TTCGAA 1 cut(s) 831
BpuEI CTTGAG 5 cut(s) 663, 737, 1073, 1155, 1399
BsaAI YACGTR 1 cut(s) 235
BsaJI CCNNGG 3 cut(s) 27, 1194, 1366
BsaWI WCCGGW 3 cut(s) 445, 486, 1437
BsaXI ACNNNNNCTCC 4 cut(s) 591, 621, 1460, 1490
Bse1I ACTGG 3 cut(s) 944, 1636, 1853
Bse3DI GCAATG 1 cut(s) 1668
BseBI CCWGG 3 cut(s) 29, 1367, 2177
BseDI CCNNGG 3 cut(s) 27, 1194, 1366
BseGI GGATG 7 cut(s) 540, 556, 586, 1204, 1588, 1618, 2050
BseMI GCAATG 1 cut(s) 1668
BseMII CTCAG 5 cut(s) 479, 670, 1640, 1686, 2174
BseNI ACTGG 3 cut(s) 944, 1636, 1853
BseRI GAGGAG 4 cut(s) 102, 117, 453, 525
BseSI GKGCMC 2 cut(s) 2187, 2343
BseXI GCAGC 6 cut(s) 129, 571, 830, 1132, 1144, 2223
BseYI CCCAGC 2 cut(s) 60, 2342
Bsh1236I CGCG 1 cut(s) 96
BshFI GGCC 7 cut(s) 18, 79, 943, 1108, 1587, 1809, 2078
BsiHKAI GWGCWC 4 cut(s) 1017, 1171, 2187, 2253
BsiHKCI CYCGRG 1 cut(s) 1978
BsiSI CCGG 4 cut(s) 446, 487, 1438, 2289
BsmAI GTCTC 4 cut(s) 993, 1559, 1675, 2142
BsmI GAATGC 2 cut(s) 317, 615
BsnI GGCC 7 cut(s) 18, 79, 943, 1108, 1587, 1809, 2078
BsoBI CYCGRG 1 cut(s) 1978
Bsp119I TTCGAA 1 cut(s) 831
Bsp1286I GDGCHC 5 cut(s) 1017, 1171, 2187, 2253, 2343
Bsp1407I TGTACA 1 cut(s) 1089
Bsp143I GATC 9 cut(s) 226, 807, 934, 1158, 1335, 1899, 1917, 1929, 2197
Bsp1720I GCTNAGC 1 cut(s) 1695
BspACI CCGC 4 cut(s) 96, 548, 692, 1975
BspANI GGCC 7 cut(s) 18, 79, 943, 1108, 1587, 1809, 2078
BspCNI CTCAG 5 cut(s) 478, 669, 1641, 1687, 2173
BspFNI CGCG 1 cut(s) 96
BspLI GGNNCC 2 cut(s) 462, 690
BspMI ACCTGC 3 cut(s) 298, 1623, 1815
BspPI GGATC 5 cut(s) 221, 942, 1166, 1912, 2192
BspQI GCTCTTC 1 cut(s) 1805
BspT104I TTCGAA 1 cut(s) 831
BspTI CTTAAG 1 cut(s) 1162
BsrDI GCAATG 1 cut(s) 1668
BsrGI TGTACA 1 cut(s) 1089
BsrI ACTGG 3 cut(s) 944, 1636, 1853
BssECI CCNNGG 3 cut(s) 27, 1194, 1366
BssMI GATC 9 cut(s) 226, 807, 934, 1158, 1335, 1899, 1917, 1929, 2197
BssSI CACGAG 1 cut(s) 2370
BssT1I CCWWGG 1 cut(s) 1194
Bst2BI CACGAG 1 cut(s) 2370
Bst2UI CCWGG 3 cut(s) 29, 1367, 2177
Bst4CI ACNGT 8 cut(s) 224, 853, 1226, 1333, 1630, 1870, 2140, 2189
Bst6I CTCTTC 3 cut(s) 278, 1805, 2043
BstAFI CTTAAG 1 cut(s) 1162
BstAPI GCANNNNNTGC 2 cut(s) 427, 1615
BstAUI TGTACA 1 cut(s) 1089
BstBAI YACGTR 1 cut(s) 235
BstBI TTCGAA 1 cut(s) 831
BstC8I GCNNGC 5 cut(s) 16, 525, 2209, 2327, 2384
BstDEI CTNAG 8 cut(s) 465, 501, 656, 1040, 1649, 1695, 1706, 2160
BstENI CCTNNNNNAGG 1 cut(s) 213
BstF5I GGATG 7 cut(s) 540, 556, 586, 1204, 1588, 1618, 2050
BstFNI CGCG 1 cut(s) 96
BstKTI GATC 9 cut(s) 229, 810, 937, 1161, 1338, 1902, 1920, 1932, 2200
BstMAI GTCTC 4 cut(s) 993, 1559, 1675, 2142
BstMBI GATC 9 cut(s) 226, 807, 934, 1158, 1335, 1899, 1917, 1929, 2197
BstMWI GCNNNNNNNGC 4 cut(s) 427, 554, 1129, 1615
BstNI CCWGG 3 cut(s) 29, 1367, 2177
BstNSI RCATGY 5 cut(s) 421, 1732, 1753, 1945, 2386
BstSCI CCNGG 3 cut(s) 27, 1365, 2175
BstSFI CTRYAG 2 cut(s) 1866, 2244
BstSLI GKGCMC 2 cut(s) 2187, 2343
BstSNI TACGTA 1 cut(s) 235
BstUI CGCG 1 cut(s) 96
BstV1I GCAGC 6 cut(s) 129, 571, 830, 1132, 1144, 2223
BstV2I GAAGAC 4 cut(s) 333, 807, 1196, 2365
BstX2I RGATCY 2 cut(s) 1158, 2197
BstXI CCANNNNNNTGG 3 cut(s) 570, 648, 1370
BstYI RGATCY 2 cut(s) 1158, 2197
BsuI GTATCC 1 cut(s) 1993
BsuRI GGCC 7 cut(s) 18, 79, 943, 1108, 1587, 1809, 2078
BtgZI GCGATG 1 cut(s) 2137
BtrI CACGTC 1 cut(s) 2086
BtsCI GGATG 7 cut(s) 540, 556, 586, 1204, 1588, 1618, 2050
BtsI GCAGTG 2 cut(s) 1402, 2187
BtsIMutI CAGTG 7 cut(s) 473, 908, 1402, 1626, 1846, 2187, 2343
BveI ACCTGC 3 cut(s) 298, 1623, 1815
Cac8I GCNNGC 5 cut(s) 16, 525, 2209, 2327, 2384
CaiI CAGNNNCTG 1 cut(s) 2024
Cfr13I GGNCC 4 cut(s) 17, 621, 1257, 2077
Csp6I GTAC 3 cut(s) 845, 1090, 1726
CviQI GTAC 3 cut(s) 845, 1090, 1726
DdeI CTNAG 8 cut(s) 465, 501, 656, 1040, 1649, 1695, 1706, 2160
DpnI GATC 9 cut(s) 228, 809, 936, 1160, 1337, 1901, 1919, 1931, 2199
DpnII GATC 9 cut(s) 226, 807, 934, 1158, 1335, 1899, 1917, 1929, 2197
EaeI YGGCCR 2 cut(s) 77, 1585
Eam1104I CTCTTC 3 cut(s) 278, 1805, 2043
EarI CTCTTC 3 cut(s) 278, 1805, 2043
EciI GGCGGA 2 cut(s) 563, 1964
Eco105I TACGTA 1 cut(s) 235
Eco130I CCWWGG 1 cut(s) 1194
Eco147I AGGCCT 1 cut(s) 1108
Eco32I GATATC 1 cut(s) 1655
Eco47I GGWCC 2 cut(s) 621, 1257
Eco57I CTGAAG 4 cut(s) 573, 1264, 2319, 2338
Eco88I CYCGRG 1 cut(s) 1978
EcoNI CCTNNNNNAGG 1 cut(s) 213
EcoRI GAATTC 1 cut(s) 2130
EcoRII CCWGG 3 cut(s) 27, 1365, 2175
EcoRV GATATC 1 cut(s) 1655
EcoT14I CCWWGG 1 cut(s) 1194
EcoT22I ATGCAT 2 cut(s) 423, 1611
ErhI CCWWGG 1 cut(s) 1194
FalI AAGNNNNNCTT 4 cut(s) 825, 857, 1164, 1196
FbaI TGATCA 1 cut(s) 1335
Fnu4HI GCNGC 7 cut(s) 118, 585, 692, 819, 1121, 1133, 2212
FokI GGATG 7 cut(s) 547, 563, 593, 1211, 1575, 1605, 2057
Fsp4HI GCNGC 7 cut(s) 118, 585, 692, 819, 1121, 1133, 2212
FspBI CTAG 8 cut(s) 435, 1073, 1116, 1343, 1535, 1874, 1992, 2313
GluI GCNGC 7 cut(s) 118, 585, 692, 819, 1121, 1133, 2212
GsaI CCCAGC 2 cut(s) 64, 2346
HaeIII GGCC 7 cut(s) 18, 79, 943, 1108, 1587, 1809, 2078
HapII CCGG 4 cut(s) 446, 487, 1438, 2289
HindIII AAGCTT 4 cut(s) 555, 567, 717, 1276
HpaII CCGG 4 cut(s) 446, 487, 1438, 2289
HphI GGTGA 5 cut(s) 630, 955, 1264, 1490, 2021
Hpy166II GTNNAC 6 cut(s) 631, 963, 1548, 1633, 2029, 2185
Hpy188III TCNNGA 8 cut(s) 680, 754, 1073, 1148, 1416, 1451, 1506, 2269
Hpy8I GTNNAC 6 cut(s) 631, 963, 1548, 1633, 2029, 2185
HpyAV CCTTC 7 cut(s) 596, 721, 914, 2068, 2071, 2275, 2343
HpyCH4III ACNGT 8 cut(s) 224, 853, 1226, 1333, 1630, 1870, 2140, 2189
HpyCH4IV ACGT 3 cut(s) 234, 633, 2085
HpyF10VI GCNNNNNNNGC 4 cut(s) 427, 554, 1129, 1615
HpyF3I CTNAG 8 cut(s) 465, 501, 656, 1040, 1649, 1695, 1706, 2160
HpySE526I ACGT 3 cut(s) 234, 633, 2085
Ksp22I TGATCA 1 cut(s) 1335
Kzo9I GATC 9 cut(s) 226, 807, 934, 1158, 1335, 1899, 1917, 1929, 2197
LguI GCTCTTC 1 cut(s) 1805
LmnI GCTCC 4 cut(s) 466, 688, 1400, 1755
Lsp1109I GCAGC 6 cut(s) 129, 571, 830, 1132, 1144, 2223
LweI GCATC 3 cut(s) 571, 1207, 1627
MaeI CTAG 8 cut(s) 435, 1073, 1116, 1343, 1535, 1874, 1992, 2313
MaeII ACGT 3 cut(s) 234, 633, 2085
MaeIII GTNAC 2 cut(s) 1844, 2257
MalI GATC 9 cut(s) 228, 809, 936, 1160, 1337, 1901, 1919, 1931, 2199
MboI GATC 9 cut(s) 226, 807, 934, 1158, 1335, 1899, 1917, 1929, 2197
MfeI CAATTG 1 cut(s) 1137
MflI RGATCY 2 cut(s) 1158, 2197
MhlI GDGCHC 5 cut(s) 1017, 1171, 2187, 2253, 2343
MlsI TGGCCA 1 cut(s) 79
MluCI AATT 9 cut(s) 253, 669, 1137, 1419, 1788, 1913, 1963, 2130, 2347
MluNI TGGCCA 1 cut(s) 79
MlyI GAGTC 4 cut(s) 669, 1041, 1053, 1406
MmeI TCCRAC 5 cut(s) 224, 718, 794, 2125, 2171
Mox20I TGGCCA 1 cut(s) 79
Mph1103I ATGCAT 2 cut(s) 423, 1611
MroXI GAANNNNTTC 2 cut(s) 1792, 2025
MscI TGGCCA 1 cut(s) 79
MseI TTAA 3 cut(s) 183, 212, 1163
MslI CAYNNNNRTG 3 cut(s) 579, 1368, 2034
Msp20I TGGCCA 1 cut(s) 79
MspCI CTTAAG 1 cut(s) 1162
MspI CCGG 4 cut(s) 446, 487, 1438, 2289
MspR9I CCNGG 3 cut(s) 29, 1367, 2177
MunI CAATTG 1 cut(s) 1137
Mva1269I GAATGC 2 cut(s) 317, 615
MvaI CCWGG 3 cut(s) 29, 1367, 2177
MvnI CGCG 1 cut(s) 96
MwoI GCNNNNNNNGC 4 cut(s) 427, 554, 1129, 1615
NdeII GATC 9 cut(s) 226, 807, 934, 1158, 1335, 1899, 1917, 1929, 2197
NlaIV GGNNCC 2 cut(s) 462, 690
NmuCI GTSAC 2 cut(s) 1844, 2257
NsiI ATGCAT 2 cut(s) 423, 1611
NspI RCATGY 5 cut(s) 421, 1732, 1753, 1945, 2386
NspV TTCGAA 1 cut(s) 831
OliI CACNNNNGTG 1 cut(s) 1368
PaeI GCATGC 1 cut(s) 2386
PaqCI CACCTGC 2 cut(s) 298, 1815
PceI AGGCCT 1 cut(s) 1108
PciI ACATGT 2 cut(s) 1749, 1941
PciSI GCTCTTC 1 cut(s) 1805
PctI GAATGC 2 cut(s) 317, 615
PdmI GAANNNNTTC 2 cut(s) 1792, 2025
PfeI GAWTC 7 cut(s) 334, 1079, 1144, 1434, 1742, 2172, 2316
PflMI CCANNNNNTGG 2 cut(s) 1391, 2086
PkrI GCNGC 7 cut(s) 119, 586, 693, 820, 1122, 1134, 2213
PleI GAGTC 4 cut(s) 668, 1040, 1052, 1406
PpsI GAGTC 4 cut(s) 668, 1040, 1052, 1406
Ppu21I YACGTR 1 cut(s) 235
PscI ACATGT 2 cut(s) 1749, 1941
Psp6I CCWGG 3 cut(s) 27, 1365, 2175
PspFI CCCAGC 2 cut(s) 60, 2342
PspGI CCWGG 3 cut(s) 27, 1365, 2175
PspN4I GGNNCC 2 cut(s) 462, 690
PspPI GGNCC 4 cut(s) 17, 621, 1257, 2077
PsrI GAACNNNNNNTAC 2 cut(s) 828, 860
PstNI CAGNNNCTG 1 cut(s) 2024
PsuI RGATCY 2 cut(s) 1158, 2197
RsaI GTAC 3 cut(s) 846, 1091, 1727
RsaNI GTAC 3 cut(s) 845, 1090, 1726
RseI CAYNNNNRTG 3 cut(s) 579, 1368, 2034
SapI GCTCTTC 1 cut(s) 1805
SaqAI TTAA 3 cut(s) 183, 212, 1163
SatI GCNGC 7 cut(s) 118, 585, 692, 819, 1121, 1133, 2212
Sau3AI GATC 9 cut(s) 226, 807, 934, 1158, 1335, 1899, 1917, 1929, 2197
Sau96I GGNCC 4 cut(s) 17, 621, 1257, 2077
SchI GAGTC 4 cut(s) 669, 1041, 1053, 1406
ScrFI CCNGG 3 cut(s) 29, 1367, 2177
SduI GDGCHC 5 cut(s) 1017, 1171, 2187, 2253, 2343
SfaNI GCATC 3 cut(s) 571, 1207, 1627
SfcI CTRYAG 2 cut(s) 1866, 2244
SfuI TTCGAA 1 cut(s) 831
SinI GGWCC 2 cut(s) 621, 1257
SmiMI CAYNNNNRTG 3 cut(s) 579, 1368, 2034
SmlI CTYRAG 6 cut(s) 678, 752, 1052, 1162, 1170, 1414
SmoI CTYRAG 6 cut(s) 678, 752, 1052, 1162, 1170, 1414
SnaBI TACGTA 1 cut(s) 235
SphI GCATGC 1 cut(s) 2386
Sse9I AATT 9 cut(s) 253, 669, 1137, 1419, 1788, 1913, 1963, 2130, 2347
SseBI AGGCCT 1 cut(s) 1108
SsiI CCGC 4 cut(s) 96, 548, 692, 1975
SspMI CTAG 8 cut(s) 435, 1073, 1116, 1343, 1535, 1874, 1992, 2313
StuI AGGCCT 1 cut(s) 1108
StyD4I CCNGG 3 cut(s) 27, 1365, 2175
StyI CCWWGG 1 cut(s) 1194
TaaI ACNGT 8 cut(s) 224, 853, 1226, 1333, 1630, 1870, 2140, 2189
TaiI ACGT 3 cut(s) 237, 636, 2088
TaqI TCGA 5 cut(s) 831, 969, 1272, 1353, 2072
TaqII GACCGA 1 cut(s) 609
TasI AATT 9 cut(s) 253, 669, 1137, 1419, 1788, 1913, 1963, 2130, 2347
TatI WGTACW 3 cut(s) 844, 1089, 1725
TauI GCSGC 1 cut(s) 694
TfiI GAWTC 7 cut(s) 334, 1079, 1144, 1434, 1742, 2172, 2316
Tru1I TTAA 3 cut(s) 183, 212, 1163
Tru9I TTAA 3 cut(s) 183, 212, 1163
TscAI CASTG 7 cut(s) 473, 915, 1402, 1633, 1853, 2187, 2343
TseFI GTSAC 2 cut(s) 1844, 2257
TseI GCWGC 6 cut(s) 117, 584, 818, 1120, 1132, 2211
Tsp45I GTSAC 2 cut(s) 1844, 2257
TspGWI ACGGA 1 cut(s) 1958
TspRI CASTG 7 cut(s) 473, 915, 1402, 1633, 1853, 2187, 2343
Van91I CCANNNNNTGG 2 cut(s) 1391, 2086
Vha464I CTTAAG 1 cut(s) 1162
VneI GTGCAC 1 cut(s) 2183
VpaK11BI GGWCC 2 cut(s) 621, 1257
XagI CCTNNNNNAGG 1 cut(s) 213
XapI RAATTY 2 cut(s) 1963, 2130
XbaI TCTAGA 1 cut(s) 1072
XceI RCATGY 5 cut(s) 421, 1732, 1753, 1945, 2386
XmnI GAANNNNTTC 2 cut(s) 1792, 2025
XspI CTAG 8 cut(s) 435, 1073, 1116, 1343, 1535, 1874, 1992, 2313
Zsp2I ATGCAT 2 cut(s) 423, 1611
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.