Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0014376

Physical Location & Seq

Genomic Coordinates Forward (+)

18868892 .. 18872300

Gene Structure 3409 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g24910.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1557 bp

ATGCCCACCTGCGTCTCCTGCAATTCCACCTCCTTCACCCCCGACGACGTCTCCGGCCGCCTCTACTGCTCCTCCTGCGGCCACATCCAAGACTACGACAACTACGTCAACGTCTACGGCGGCGTCTCCGGCACCACCGGCACCTTCATCCGCCTCGGCACCTCCGGCCAGGGCACCAACTACCACTACCGCGACACCAAGATCTACGAGGCCAACAAACTCATCGATGACGTCACTCTCCGTCTCAACCTCTCGCCCTCCCGCGCCGACGAGATCAAGGCCATGATCGGTAAGATCACGGAAGGTGAGTTCGGCCAAGGTAACTGGTTCAATGTTTTGATTGGTGCCTGTGCTTATGTGGTTATGAGGAGGGATAGCAAGTCCATGCCGATCTCCGAGGTCGGGGCGGCTATCGGATGCGACGATTACGAGCTCGGTAGGATGATCATGCGTGTTGTTGATTTTCTAGAGCTGAAGAAACCGGACTTCCCGGAGTTTGATATTGTGAGGTTGTACGAGAGGACGTTGCGCAATTCGAGAGTGTTAGGGAGTTTAGGAGGGAGTGTGAGGGAGAGGATGAGGAAGCAGGGGATTTTTTTGATACAATGTGCTATTAAGTGGTTCTTGACCACTGGCCGCCGGCCCCTGCCGATGGTGGTGGCCATTTTGGTTCTGGTGGCGGAGTTGAATGGAGTTGGCGGTGTTAGTATTCAGGAGTGTGCTAAGGAGTTCAATGCGGTTGTTCATACTTGTAGGTTGAGGTATAGGGAGCTTTTAGAGGCTCTTGTGAAGGCTGCGCAGGTGTTGCCTTGGGGGAAGGATGTTAATGTTAAAAATGTGCTCAGGCACGCGCCCACTGTGATTCAGTATATGGAGAAGAAGTCAATGTCGGAGCCTATAGGGAAGAGGGATTCGGAGGGTGGTGTTGGGATTGATTTGAGAGATGTGATCAATGAGTGCTTGGGTAGAAATGGCGATGCAGATAAGTCTGCGACAGAAGTAGAAAAGTTCAAGAAGCTCTCAGATGATTGTCAGGGGATGGATAGGATGAAGCTTTCACATGAATGCTTGGCCATGGTTTACTCAAAGTCTTTAGATGAGATGGAGAATTTTAAGTCCTCTGGCGGGTTTGGAGTTGTTCATGAAAGGGAAGAGAGGCAGTATTTTGATCCTCATGATTGCACGGAGTGGTGGAATGGGAAGTCAGAATTAAGTAAGAAGCTTATGCTTAAGAATATATTGGAGAAAGACGTAGGCTTGGATCATATGCCGCCATCTTATCTTAAGGGTCTCAAGGCCTGTAAGAGGAGGAGAGAAAGAATAAATGCTGCCAAACAGCGAATTCATAAGATTATGCATCCATCAAATGCTCGTTCAGATGTTTGCATTTCTGAAGATGTAAAGAATGGAAGAAAAAGAAAGAGAAGGCATACTCTTGATTGGGAAGATTTAATTATTGAAACCCTCCTCCTTCATCAGGTAAAAGAAGAGGAGATTGAGAAGGGATGGTATAATAGCTTACTGGATTTACATGTATTTAACTCTGGAGCGGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000126 GO:0001016 GO:0001032 GO:0001067 GO:0001085 GO:0001091 GO:0001093 GO:0001098 GO:0001099 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0006355 GO:0006359 GO:0006950 GO:0006979 GO:0007275 GO:0008134 GO:0008150 GO:0009790 GO:0009791 GO:0009793 GO:0009846 GO:0009856 GO:0009889 GO:0009987 GO:0010154 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019899 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0034599 GO:0042221 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044212 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044706 GO:0044798 GO:0046983 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0070063 GO:0070887 GO:0080090 GO:0090576 GO:0097159 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TF_Zn_Ribbon

Protein Analysis

519

Amino Acids

58.66

Weight (kDa)

8.37

Isoelectric Point (pI)

44.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BRF2-like_C_cyclin_rpt	PF21886	190 - 290	8.6e-07	BRF2-like, C-terminal cyclin repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014376)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35540
fragaria_vesca	FvH4_6g24910
malus_domestica	MD05G1301900.v1.1
prunus_persica	Prupe.4G060500_v2.0.a1
pyrus_communis	pycom05g27950
rosa_chinensis	RchiOBHm_Chr5g0010711
rosa_laevigata	RLG00000031773
rosa_multiflora	Rmu_sc0007447.1_g000001
rosa_roxburghii	Rroxscaffold_1G00065680
rosa_rugosa	Rorug04G0451700 Rorug04G0451800
rosa_samantha	Rh5AG083500 Rh5BG078700 Rh5CG091500 Rh5DG078900
rosa_wichuraiana	Rw0G000630 Rw0G022330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	17, 790
AasI	GACNNNNNNGTC	1 cut(s)	104
AatII	GACGTC	2 cut(s)	51, 234
Acc16I	TGCGCA	2 cut(s)	530, 798
Acc36I	ACCTGC	2 cut(s)	17, 790
AccB1I	GGYRCC	5 cut(s)	131, 140, 158, 173, 344
AccBSI	CCGCTC	1 cut(s)	1550
AccI	GTMKAC	1 cut(s)	114
AccII	CGCG	3 cut(s)	192, 264, 851
AclWI	GGATC	2 cut(s)	1163, 1269
AcoI	YGGCCR	7 cut(s)	55, 79, 166, 313, 634, 660, 1071
AcsI	RAATTY	2 cut(s)	1108, 1341
AcuI	CTGAAG	2 cut(s)	494, 1413
AcyI	GRCGYC	3 cut(s)	48, 123, 231
AdeI	CACNNNGTG	1 cut(s)	1188
AfaI	GTAC	1 cut(s)	515
AfiI	CCNNNNNNNGG	5 cut(s)	402, 652, 1125, 1305, 1477
AflII	CTTAAG	2 cut(s)	1229, 1283
AflIII	ACRYGT	1 cut(s)	1531
AgsI	TTSAA	5 cut(s)	331, 688, 733, 1012, 1460
AjnI	CCWGG	1 cut(s)	168
AloI	GAACNNNNNNTCC	2 cut(s)	293, 325
AluBI	AGCT	7 cut(s)	433, 472, 772, 1018, 1054, 1222, 1518
AluI	AGCT	7 cut(s)	433, 472, 772, 1018, 1054, 1222, 1518
Alw21I	GWGCWC	2 cut(s)	435, 843
Alw26I	GTCTC	5 cut(s)	19, 55, 130, 248, 1295
AlwI	GGATC	2 cut(s)	1163, 1269
ApeKI	GCWGC	2 cut(s)	794, 1328
ApoI	RAATTY	2 cut(s)	1108, 1341
AspLEI	GCGC	4 cut(s)	266, 531, 799, 853
AspS9I	GGNCC	1 cut(s)	642
AsuC2I	CCSGG	1 cut(s)	491
AsuHPI	GGTGA	2 cut(s)	28, 317
BaeGI	GKGCMC	1 cut(s)	176
BalI	TGGCCA	2 cut(s)	662, 1073
BanI	GGYRCC	5 cut(s)	131, 140, 158, 173, 344
BanII	GRGCYC	1 cut(s)	435
Bbv12I	GWGCWC	2 cut(s)	435, 843
BbvI	GCAGC	2 cut(s)	781, 1315
BccI	CCATC	6 cut(s)	646, 1033, 1096, 1282, 1369, 1500
BceAI	ACGGC	1 cut(s)	133
BciT130I	CCWGG	1 cut(s)	170
BclI	TGATCA	2 cut(s)	444, 948
BcnI	CCSGG	1 cut(s)	491
BcoDI	GTCTC	5 cut(s)	19, 55, 130, 248, 1295
BfaI	CTAG	1 cut(s)	467
BfmI	CTRYAG	1 cut(s)	897
BfrI	CTTAAG	2 cut(s)	1229, 1283
BfuAI	ACCTGC	2 cut(s)	17, 790
BglII	AGATCT	1 cut(s)	201
BisI	GCNGC	8 cut(s)	58, 79, 121, 408, 637, 795, 1271, 1329
BlsI	GCNGC	8 cut(s)	59, 80, 122, 409, 638, 796, 1272, 1330
Bme1390I	CCNGG	2 cut(s)	170, 491
BmgT120I	GGNCC	1 cut(s)	642
BmiI	GGNNCC	7 cut(s)	133, 142, 160, 175, 346, 644, 894
BmrFI	CCNGG	2 cut(s)	170, 491
BmsI	GCATC	3 cut(s)	407, 967, 1366
Bpu10I	CCTNAGC	2 cut(s)	723, 842
BpuEI	CTTGAG	1 cut(s)	1277
BpuMI	CCSGG	1 cut(s)	491
Bsa29I	ATCGAT	1 cut(s)	225
BsaHI	GRCGYC	3 cut(s)	48, 123, 231
BsaI	GGTCTC	1 cut(s)	1295
BsaJI	CCNNGG	6 cut(s)	154, 169, 316, 396, 809, 1074
BsaWI	WCCGGW	1 cut(s)	481
BsaXI	ACNNNNNCTCC	8 cut(s)	35, 56, 65, 86, 549, 579, 866, 896
Bsc4I	CCNNNNNNNGG	5 cut(s)	402, 652, 1125, 1305, 1477
Bse118I	RCCGGY	2 cut(s)	137, 639
Bse1I	ACTGG	3 cut(s)	329, 637, 1527
BseBI	CCWGG	1 cut(s)	170
BseCI	ATCGAT	1 cut(s)	225
BseDI	CCNNGG	6 cut(s)	154, 169, 316, 396, 809, 1074
BseLI	CCNNNNNNNGG	5 cut(s)	402, 652, 1125, 1305, 1477
BseMII	CTCAG	2 cut(s)	856, 1035
BseNI	ACTGG	3 cut(s)	329, 637, 1527
BseRI	GAGGAG	6 cut(s)	61, 382, 1321, 1324, 1457, 1505
BseSI	GKGCMC	1 cut(s)	176
BseX3I	CGGCCG	1 cut(s)	55
BseXI	GCAGC	2 cut(s)	781, 1315
Bsh1236I	CGCG	3 cut(s)	192, 264, 851
Bsh1285I	CGRYCG	1 cut(s)	58
BshNI	GGYRCC	5 cut(s)	131, 140, 158, 173, 344
BshVI	ATCGAT	1 cut(s)	225
BsiEI	CGRYCG	1 cut(s)	58
BsiHKAI	GWGCWC	2 cut(s)	435, 843
BsiSI	CCGG	7 cut(s)	54, 129, 138, 165, 482, 491, 640
BslI	CCNNNNNNNGG	5 cut(s)	402, 652, 1125, 1305, 1477
BsmAI	GTCTC	5 cut(s)	19, 55, 130, 248, 1295
BsmBI	CGTCTC	4 cut(s)	19, 55, 130, 248
BsmI	GAATGC	1 cut(s)	1070
Bso31I	GGTCTC	1 cut(s)	1295
Bsp1286I	GDGCHC	3 cut(s)	176, 435, 843
Bsp143I	GATC	9 cut(s)	201, 273, 285, 294, 390, 444, 948, 1168, 1261
Bsp19I	CCATGG	1 cut(s)	1074
BspCNI	CTCAG	2 cut(s)	855, 1034
BspDI	ATCGAT	1 cut(s)	225
BspFNI	CGCG	3 cut(s)	192, 264, 851
BspHI	TCATGA	2 cut(s)	1141, 1174
BspLI	GGNNCC	7 cut(s)	133, 142, 160, 175, 346, 644, 894
BspMI	ACCTGC	2 cut(s)	17, 790
BspPI	GGATC	2 cut(s)	1163, 1269
BspT107I	GGYRCC	5 cut(s)	131, 140, 158, 173, 344
BspTI	CTTAAG	2 cut(s)	1229, 1283
BspTNI	GGTCTC	1 cut(s)	1295
BsrBI	CCGCTC	1 cut(s)	1550
BsrFI	RCCGGY	2 cut(s)	137, 639
BsrI	ACTGG	3 cut(s)	329, 637, 1527
BssAI	RCCGGY	2 cut(s)	137, 639
BssECI	CCNNGG	6 cut(s)	154, 169, 316, 396, 809, 1074
BssMI	GATC	9 cut(s)	201, 273, 285, 294, 390, 444, 948, 1168, 1261
BssNI	GRCGYC	3 cut(s)	48, 123, 231
BssT1I	CCWWGG	3 cut(s)	316, 809, 1074
Bst2UI	CCWGG	1 cut(s)	170
Bst4CI	ACNGT	1 cut(s)	859
Bst6I	CTCTTC	3 cut(s)	899, 1146, 1482
BstACI	GRCGYC	3 cut(s)	48, 123, 231
BstAFI	CTTAAG	2 cut(s)	1229, 1283
BstAPI	GCANNNNNTGC	1 cut(s)	805
BstC8I	GCNNGC	2 cut(s)	641, 849
BstDEI	CTNAG	3 cut(s)	723, 842, 1021
BstDSI	CCRYGG	1 cut(s)	1074
BstENI	CCTNNNNNAGG	2 cut(s)	1303, 1475
BstFNI	CGCG	3 cut(s)	192, 264, 851
BstHHI	GCGC	4 cut(s)	266, 531, 799, 853
BstKTI	GATC	9 cut(s)	204, 276, 288, 297, 393, 447, 951, 1171, 1264
BstMAI	GTCTC	5 cut(s)	19, 55, 130, 248, 1295
BstMBI	GATC	9 cut(s)	201, 273, 285, 294, 390, 444, 948, 1168, 1261
BstMCI	CGRYCG	1 cut(s)	58
BstMWI	GCNNNNNNNGC	7 cut(s)	18, 66, 75, 129, 138, 165, 805
BstNI	CCWGG	1 cut(s)	170
BstNSI	RCATGY	1 cut(s)	1535
BstSCI	CCNGG	2 cut(s)	168, 489
BstSFI	CTRYAG	1 cut(s)	897
BstSLI	GKGCMC	1 cut(s)	176
BstUI	CGCG	3 cut(s)	192, 264, 851
BstV1I	GCAGC	2 cut(s)	781, 1315
BstX2I	RGATCY	1 cut(s)	201
BstYI	RGATCY	1 cut(s)	201
BstZI	CGGCCG	1 cut(s)	55
Bsu15I	ATCGAT	1 cut(s)	225
BsuTUI	ATCGAT	1 cut(s)	225
BtgI	CCRYGG	1 cut(s)	1074
BtgZI	GCGATG	1 cut(s)	990
BtsIMutI	CAGTG	2 cut(s)	630, 855
BveI	ACCTGC	2 cut(s)	17, 790
Cac8I	GCNNGC	2 cut(s)	641, 849
CciI	TCATGA	2 cut(s)	1141, 1174
CfoI	GCGC	4 cut(s)	266, 531, 799, 853
Cfr10I	RCCGGY	2 cut(s)	137, 639
Cfr13I	GGNCC	1 cut(s)	642
ClaI	ATCGAT	1 cut(s)	225
CseI	GACGC	1 cut(s)	112
Csp6I	GTAC	1 cut(s)	514
CviAII	CATG	8 cut(s)	283, 385, 448, 1061, 1075, 1142, 1175, 1532
CviQI	GTAC	1 cut(s)	514
DdeI	CTNAG	3 cut(s)	723, 842, 1021
DpnI	GATC	9 cut(s)	203, 275, 287, 296, 392, 446, 950, 1170, 1263
DpnII	GATC	9 cut(s)	201, 273, 285, 294, 390, 444, 948, 1168, 1261
DraIII	CACNNNGTG	1 cut(s)	1188
DrdI	GACNNNNNNGTC	1 cut(s)	104
DseDI	GACNNNNNNGTC	1 cut(s)	104
EaeI	YGGCCR	7 cut(s)	55, 79, 166, 313, 634, 660, 1071
EagI	CGGCCG	1 cut(s)	55
Eam1104I	CTCTTC	3 cut(s)	899, 1146, 1482
EarI	CTCTTC	3 cut(s)	899, 1146, 1482
EciI	GGCGGA	2 cut(s)	140, 695
Ecl136II	GAGCTC	1 cut(s)	433
EclXI	CGGCCG	1 cut(s)	55
Eco130I	CCWWGG	3 cut(s)	316, 809, 1074
Eco147I	AGGCCT	1 cut(s)	1298
Eco24I	GRGCYC	1 cut(s)	435
Eco31I	GGTCTC	1 cut(s)	1295
Eco52I	CGGCCG	1 cut(s)	55
Eco53kI	GAGCTC	1 cut(s)	433
Eco57I	CTGAAG	2 cut(s)	494, 1413
EcoICRI	GAGCTC	1 cut(s)	433
EcoNI	CCTNNNNNAGG	2 cut(s)	1303, 1475
EcoRI	GAATTC	1 cut(s)	1341
EcoRII	CCWGG	1 cut(s)	168
EcoT14I	CCWWGG	3 cut(s)	316, 809, 1074
EcoT22I	ATGCAT	1 cut(s)	1359
EcoT38I	GRGCYC	1 cut(s)	435
ErhI	CCWWGG	3 cut(s)	316, 809, 1074
Esp3I	CGTCTC	4 cut(s)	19, 55, 130, 248
FaeI	CATG	8 cut(s)	286, 388, 451, 1064, 1078, 1145, 1178, 1535
FalI	AAGNNNNNCTT	2 cut(s)	608, 640
FatI	CATG	8 cut(s)	282, 384, 447, 1060, 1074, 1141, 1174, 1531
FauI	CCCGC	2 cut(s)	269, 1118
FauNDI	CATATG	1 cut(s)	1266
FbaI	TGATCA	2 cut(s)	444, 948
FblI	GTMKAC	1 cut(s)	114
Fnu4HI	GCNGC	8 cut(s)	58, 79, 121, 408, 637, 795, 1271, 1329
FriOI	GRGCYC	1 cut(s)	435
Fsp4HI	GCNGC	8 cut(s)	58, 79, 121, 408, 637, 795, 1271, 1329
FspBI	CTAG	1 cut(s)	467
FspI	TGCGCA	2 cut(s)	530, 798
GlaI	GCGC	4 cut(s)	265, 530, 798, 852
GluI	GCNGC	8 cut(s)	58, 79, 121, 408, 637, 795, 1271, 1329
HapII	CCGG	7 cut(s)	54, 129, 138, 165, 482, 491, 640
HgaI	GACGC	1 cut(s)	112
HhaI	GCGC	4 cut(s)	266, 531, 799, 853
Hin1I	GRCGYC	3 cut(s)	48, 123, 231
Hin1II	CATG	8 cut(s)	286, 388, 451, 1064, 1078, 1145, 1178, 1535
Hin6I	GCGC	4 cut(s)	264, 529, 797, 851
HinP1I	GCGC	4 cut(s)	264, 529, 797, 851
HincII	GTYRAC	1 cut(s)	109
HindII	GTYRAC	1 cut(s)	109
HindIII	AAGCTT	2 cut(s)	1052, 1220
HinfI	GANTC	2 cut(s)	862, 911
HpaII	CCGG	7 cut(s)	54, 129, 138, 165, 482, 491, 640
HphI	GGTGA	2 cut(s)	28, 317
Hpy166II	GTNNAC	3 cut(s)	109, 115, 1081
Hpy188I	TCNGA	8 cut(s)	397, 416, 892, 916, 1024, 1207, 1378, 1393
Hpy188III	TCNNGA	9 cut(s)	467, 537, 625, 713, 1012, 1142, 1175, 1436, 1545
Hpy8I	GTNNAC	3 cut(s)	109, 115, 1081
Hpy99I	CGWCG	4 cut(s)	47, 50, 272, 425
HpyAV	CCTTC	8 cut(s)	43, 154, 296, 784, 811, 1419, 1481, 1495
HpyCH4III	ACNGT	1 cut(s)	859
HpyCH4IV	ACGT	6 cut(s)	48, 105, 111, 231, 524, 1251
HpyCH4V	TGCA	5 cut(s)	21, 980, 1182, 1357, 1386
HpyF10VI	GCNNNNNNNGC	7 cut(s)	18, 66, 75, 129, 138, 165, 805
HpyF3I	CTNAG	3 cut(s)	723, 842, 1021
HpySE526I	ACGT	6 cut(s)	48, 105, 111, 231, 524, 1251
Hsp92I	GRCGYC	3 cut(s)	48, 123, 231
Hsp92II	CATG	8 cut(s)	286, 388, 451, 1064, 1078, 1145, 1178, 1535
HspAI	GCGC	4 cut(s)	264, 529, 797, 851
KroI	GCCGGC	1 cut(s)	639
KroNI	GCCGGC	1 cut(s)	641
Ksp22I	TGATCA	2 cut(s)	444, 948
Kzo9I	GATC	9 cut(s)	201, 273, 285, 294, 390, 444, 948, 1168, 1261
LmnI	GCTCC	4 cut(s)	74, 769, 892, 1547
Lsp1109I	GCAGC	2 cut(s)	781, 1315
LweI	GCATC	3 cut(s)	407, 967, 1366
MaeI	CTAG	1 cut(s)	467
MaeII	ACGT	6 cut(s)	48, 105, 111, 231, 524, 1251
MaeIII	GTNAC	2 cut(s)	232, 320
MalI	GATC	9 cut(s)	203, 275, 287, 296, 392, 446, 950, 1170, 1263
MbiI	CCGCTC	1 cut(s)	1550
MboI	GATC	9 cut(s)	201, 273, 285, 294, 390, 444, 948, 1168, 1261
MboII	GAAGA	8 cut(s)	487, 889, 916, 1163, 1406, 1422, 1457, 1499
MflI	RGATCY	1 cut(s)	201
MhlI	GDGCHC	3 cut(s)	176, 435, 843
MlsI	TGGCCA	2 cut(s)	662, 1073
MluCI	AATT	6 cut(s)	22, 532, 1108, 1208, 1341, 1452
MluNI	TGGCCA	2 cut(s)	662, 1073
MmeI	TCCRAC	1 cut(s)	870
Mox20I	TGGCCA	2 cut(s)	662, 1073
Mph1103I	ATGCAT	1 cut(s)	1359
MroNI	GCCGGC	1 cut(s)	639
MscI	TGGCCA	2 cut(s)	662, 1073
MseI	TTAA	9 cut(s)	615, 825, 831, 1113, 1211, 1230, 1284, 1451, 1539
MslI	CAYNNNNRTG	1 cut(s)	1063
Msp20I	TGGCCA	2 cut(s)	662, 1073
MspCI	CTTAAG	2 cut(s)	1229, 1283
MspI	CCGG	7 cut(s)	54, 129, 138, 165, 482, 491, 640
MspR9I	CCNGG	2 cut(s)	170, 491
Mva1269I	GAATGC	1 cut(s)	1070
MvaI	CCWGG	1 cut(s)	170
MvnI	CGCG	3 cut(s)	192, 264, 851
MwoI	GCNNNNNNNGC	7 cut(s)	18, 66, 75, 129, 138, 165, 805
NaeI	GCCGGC	1 cut(s)	641
NciI	CCSGG	1 cut(s)	491
NcoI	CCATGG	1 cut(s)	1074
NdeI	CATATG	1 cut(s)	1266
NdeII	GATC	9 cut(s)	201, 273, 285, 294, 390, 444, 948, 1168, 1261
NgoMIV	GCCGGC	1 cut(s)	639
NlaIII	CATG	8 cut(s)	286, 388, 451, 1064, 1078, 1145, 1178, 1535
NlaIV	GGNNCC	7 cut(s)	133, 142, 160, 175, 346, 644, 894
NmeAIII	GCCGAG	1 cut(s)	135
NmuCI	GTSAC	1 cut(s)	232
NsbI	TGCGCA	2 cut(s)	530, 798
NsiI	ATGCAT	1 cut(s)	1359
NspI	RCATGY	1 cut(s)	1535
PagI	TCATGA	2 cut(s)	1141, 1174
PaqCI	CACCTGC	2 cut(s)	17, 790
PceI	AGGCCT	1 cut(s)	1298
PciI	ACATGT	1 cut(s)	1531
PcsI	WCGNNNNNNNCGW	2 cut(s)	102, 420
PctI	GAATGC	1 cut(s)	1070
PdiI	GCCGGC	1 cut(s)	641
PfeI	GAWTC	2 cut(s)	862, 911
PflFI	GACNNNGTC	1 cut(s)	47
PfoI	TCCNGGA	1 cut(s)	489
PkrI	GCNGC	8 cut(s)	59, 80, 122, 409, 638, 796, 1272, 1330
PscI	ACATGT	1 cut(s)	1531
Psp124BI	GAGCTC	1 cut(s)	435
Psp6I	CCWGG	1 cut(s)	168
PspGI	CCWGG	1 cut(s)	168
PspN4I	GGNNCC	7 cut(s)	133, 142, 160, 175, 346, 644, 894
PspPI	GGNCC	1 cut(s)	642
PsuI	RGATCY	1 cut(s)	201
PsyI	GACNNNGTC	1 cut(s)	47
RsaI	GTAC	1 cut(s)	515
RsaNI	GTAC	1 cut(s)	514
RseI	CAYNNNNRTG	1 cut(s)	1063
SacI	GAGCTC	1 cut(s)	435
SaqAI	TTAA	9 cut(s)	615, 825, 831, 1113, 1211, 1230, 1284, 1451, 1539
SatI	GCNGC	8 cut(s)	58, 79, 121, 408, 637, 795, 1271, 1329
Sau3AI	GATC	9 cut(s)	201, 273, 285, 294, 390, 444, 948, 1168, 1261
Sau96I	GGNCC	1 cut(s)	642
ScrFI	CCNGG	2 cut(s)	170, 491
SduI	GDGCHC	3 cut(s)	176, 435, 843
SfaNI	GCATC	3 cut(s)	407, 967, 1366
SfcI	CTRYAG	1 cut(s)	897
SmiMI	CAYNNNNRTG	1 cut(s)	1063
SmlI	CTYRAG	3 cut(s)	1229, 1283, 1292
SmoI	CTYRAG	3 cut(s)	1229, 1283, 1292
Sse9I	AATT	6 cut(s)	22, 532, 1108, 1208, 1341, 1452
SseBI	AGGCCT	1 cut(s)	1298
SspMI	CTAG	1 cut(s)	467
SstI	GAGCTC	1 cut(s)	435
StuI	AGGCCT	1 cut(s)	1298
StyD4I	CCNGG	2 cut(s)	168, 489
StyI	CCWWGG	3 cut(s)	316, 809, 1074
TaaI	ACNGT	1 cut(s)	859
TaiI	ACGT	6 cut(s)	51, 108, 114, 234, 527, 1254
TaqI	TCGA	2 cut(s)	225, 536
TasI	AATT	6 cut(s)	22, 532, 1108, 1208, 1341, 1452
TauI	GCSGC	6 cut(s)	60, 81, 123, 410, 639, 1273
TfiI	GAWTC	2 cut(s)	862, 911
Tru1I	TTAA	9 cut(s)	615, 825, 831, 1113, 1211, 1230, 1284, 1451, 1539
Tru9I	TTAA	9 cut(s)	615, 825, 831, 1113, 1211, 1230, 1284, 1451, 1539
TscAI	CASTG	2 cut(s)	637, 862
TseFI	GTSAC	1 cut(s)	232
TseI	GCWGC	2 cut(s)	794, 1328
Tsp45I	GTSAC	1 cut(s)	232
TspDTI	ATGAA	8 cut(s)	136, 734, 1064, 1077, 1130, 1158, 1334, 1463
TspGWI	ACGGA	3 cut(s)	230, 314, 1199
TspRI	CASTG	2 cut(s)	637, 862
Tth111I	GACNNNGTC	1 cut(s)	47
Vha464I	CTTAAG	2 cut(s)	1229, 1283
XagI	CCTNNNNNAGG	2 cut(s)	1303, 1475
XapI	RAATTY	2 cut(s)	1108, 1341
XbaI	TCTAGA	1 cut(s)	466
XceI	RCATGY	1 cut(s)	1535
XcmI	CCANNNNNNNNNTGG	1 cut(s)	670
XmiI	GTMKAC	1 cut(s)	114
XspI	CTAG	1 cut(s)	467
ZraI	GACGTC	2 cut(s)	49, 232
Zsp2I	ATGCAT	1 cut(s)	1359

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.