Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0014376

Physical Location & Seq

Genomic Coordinates Forward (+)

8145539 .. 8147095

Gene Structure 1557 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000031773

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1557 bp

ATGCCCATCTGCGTCTCCTGCAATTCCAACTCCTTCGCCTCCGACGACGTCTCCGGCCGCCTCTACTGCTCCAACTGCGGCCACCTCCAAGACTTCGACAACTTGGTCGACGTCTACGGCGGCGTCTCCGGCCCCACCGGCACCTTCATCCGCCTCGGCACCTCCGGCCAGGGCACCGACTATCACTACCGCGAAACCAAGATCTACGAGGCCAAAAAACTCATCGATGACGTCACTCTCCGCCTCAACCTCTCGCCGTCCCGCGCCGACGAGATCAAGGCCATGATCGCCAAGATCACAGAAGGTGAGTTCGGCCAAGGTAACTGGTTCAATGTCTTGATTGGTGCTTGTGCTTATGTTGCTATGAGGAGGGATAGCAAGTCCATGCCGATCGCCGAGGTCGCGTCGGCGATCGGCTACGACGATTACGAGCTTGGTAGGATGATTATGCGTGTTGTTGATTTTCTCGAGTTGAAAAAACCTGACTTCCCTGAGTTTGATATTGTGAGATTGTATGAGAGGACGTTACAGAATTCGAGGAGGTTTGGGAGCTTGGGAGGGAGTGTGAGGGAGAGGATGAAGAAGCAGGGGATTTTTTTGATACAATGTGCCATTAAGTGGTTCTTGACCACTGGCCGCCGGCCGCTTCCAATGGTGGTGGCGATTTTGGTTCTGGTGGCGGAGTTGAATGGAGTCAGCGGTGTTAGTATTCAGGATTGTGCTAAGGAAGTCAATGCCGTTGTTAATACTTGTAGGTTGAGGTATAGGGAGCTTTTAGAGGCGCTTGTGAAGGCTGCACAGGTGTTGCCTTGGGGGAAAGATGTTACAGTTAAAAATGTTCTCAGGCATGCGCCGACGGTGATTCAGTATATGGAGAAGAAGTCTATGTCGGAGCCTAGAGGGAAGAAGGATTCCGAGGGTGGTGTTGGGATTGATTTGAGAGATGTGGTCAGTGAGTGTTTGGGGAGGAATTGCGATGCAGATGAGTCTGCAACAGAAGTTGAAAAGTTGAAGAAGGTTTCAGATGATTCTCAGCGGATGGATAAGATGAAGCTTTCGCATGAATGCTTAGCCATGGTTTACTTGAAATTTTTAGATGAGATGGATAGTTTTAAGTCCTCTGGTGGGTTTGGAACAGTTCATGAAAGAGAAGAGAGGCAGTATTTTGATCCCCACGATTGCACTGAGTGGTGGAATGGGAAGTCAGAATTAAGCAAGAAGCTTCTGCTTAAGAATATTTTGGAGAAAGACGTAGGGTTGGATCCTATGCCGCCATCTTATGTTAAGGGTCTCAAGGCCTGTAAGAGGAGGAGAGAAAGGATAAATGCTGCCAAACAGCGAATTCATAAGATTATGCATCCATCAAATGCTCATTCAGATGCTTGCATTTCTGAAGATGTACAGACTGGAAGAAAAAGAAAGAGAAGGCATACTCTTGATTGGGAAGATTTAATTATTGAAACCCTCCTCCTTCATCAAGTAAAAGAAGAAGAGATCGAGAAGGGGTGGTATAATAGCTTATTAGATTTACATGTATTTAACTCAGGAGTTGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000126 GO:0001016 GO:0001032 GO:0001067 GO:0001085 GO:0001091 GO:0001093 GO:0001098 GO:0001099 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0006355 GO:0006359 GO:0006950 GO:0006979 GO:0007275 GO:0008134 GO:0008150 GO:0009790 GO:0009791 GO:0009793 GO:0009846 GO:0009856 GO:0009889 GO:0009987 GO:0010154 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019899 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0034599 GO:0042221 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044212 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044706 GO:0044798 GO:0046983 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0070063 GO:0070887 GO:0080090 GO:0090576 GO:0097159 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TF_Zn_Ribbon

Protein Analysis

519

Amino Acids

58.63

Weight (kDa)

7.85

Isoelectric Point (pI)

45.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BRF2-like_C_cyclin_rpt	PF21886	190 - 289	7.5e-07	BRF2-like, C-terminal cyclin repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014376)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35540
fragaria_vesca	FvH4_6g24910
malus_domestica	MD05G1301900.v1.1
prunus_persica	Prupe.4G060500_v2.0.a1
pyrus_communis	pycom05g27950
rosa_chinensis	RchiOBHm_Chr5g0010711
rosa_laevigata	RLG00000031773
rosa_multiflora	Rmu_sc0007447.1_g000001
rosa_roxburghii	Rroxscaffold_1G00065680
rosa_rugosa	Rorug04G0451700 Rorug04G0451800
rosa_samantha	Rh5AG083500 Rh5BG078700 Rh5CG091500 Rh5DG078900
rosa_wichuraiana	Rw0G000630 Rw0G022330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	104
AatII	GACGTC	3 cut(s)	51, 114, 234
AccB1I	GGYRCC	3 cut(s)	140, 158, 173
AccB7I	CCANNNNNTGG	1 cut(s)	618
AccI	GTMKAC	2 cut(s)	108, 114
AccII	CGCG	3 cut(s)	192, 264, 404
AclWI	GGATC	3 cut(s)	1163, 1256, 1269
AcoI	YGGCCR	6 cut(s)	55, 79, 166, 313, 634, 641
AcsI	RAATTY	3 cut(s)	532, 1088, 1341
AcuI	CTGAAG	1 cut(s)	1413
AcyI	GRCGYC	4 cut(s)	48, 111, 123, 231
AdeI	CACNNNGTG	1 cut(s)	1188
AfaI	GTAC	1 cut(s)	1401
AfiI	CCNNNNNNNGG	3 cut(s)	618, 1125, 1305
AflII	CTTAAG	1 cut(s)	1229
AflIII	ACRYGT	1 cut(s)	1531
AgsI	TTSAA	7 cut(s)	331, 475, 688, 1004, 1012, 1087, 1460
AjnI	CCWGG	1 cut(s)	168
AluBI	AGCT	6 cut(s)	433, 552, 772, 1054, 1222, 1518
AluI	AGCT	6 cut(s)	433, 552, 772, 1054, 1222, 1518
Alw26I	GTCTC	4 cut(s)	19, 55, 130, 1295
AlwI	GGATC	3 cut(s)	1163, 1256, 1269
Ama87I	CYCGRG	1 cut(s)	467
ApeKI	GCWGC	2 cut(s)	794, 1328
ApoI	RAATTY	3 cut(s)	532, 1088, 1341
AspLEI	GCGC	3 cut(s)	266, 784, 853
AspS9I	GGNCC	1 cut(s)	131
AsuHPI	GGTGA	2 cut(s)	317, 871
AvaI	CYCGRG	1 cut(s)	467
BaeGI	GKGCMC	1 cut(s)	176
BamHI	GGATCC	1 cut(s)	1261
BanI	GGYRCC	3 cut(s)	140, 158, 173
BbvI	GCAGC	2 cut(s)	781, 1315
BccI	CCATC	5 cut(s)	14, 1033, 1096, 1282, 1369
BceAI	ACGGC	3 cut(s)	133, 241, 722
BciT130I	CCWGG	1 cut(s)	170
BcoDI	GTCTC	4 cut(s)	19, 55, 130, 1295
BfaI	CTAG	1 cut(s)	897
BfoI	RGCGCY	1 cut(s)	785
BfrI	CTTAAG	1 cut(s)	1229
BglI	GCCNNNNNGGC	1 cut(s)	138
BglII	AGATCT	1 cut(s)	201
BisI	GCNGC	8 cut(s)	58, 79, 121, 637, 644, 795, 1271, 1329
BlpI	GCTNAGC	1 cut(s)	1069
BlsI	GCNGC	8 cut(s)	59, 80, 122, 638, 645, 796, 1272, 1330
Bme1390I	CCNGG	1 cut(s)	170
BmeT110I	CYCGRG	1 cut(s)	467
BmgT120I	GGNCC	1 cut(s)	131
BmiI	GGNNCC	6 cut(s)	133, 142, 160, 175, 894, 1263
BmrFI	CCNGG	1 cut(s)	170
BmsI	GCATC	3 cut(s)	967, 1366, 1369
Bpu10I	CCTNAGC	1 cut(s)	723
Bpu1102I	GCTNAGC	1 cut(s)	1069
BpuEI	CTTGAG	1 cut(s)	1277
Bsa29I	ATCGAT	1 cut(s)	225
BsaHI	GRCGYC	4 cut(s)	48, 111, 123, 231
BsaI	GGTCTC	1 cut(s)	1295
BsaJI	CCNNGG	7 cut(s)	154, 169, 316, 396, 809, 915, 1074
BsaXI	ACNNNNNCTCC	6 cut(s)	35, 65, 549, 579, 866, 896
Bsc4I	CCNNNNNNNGG	3 cut(s)	618, 1125, 1305
Bse118I	RCCGGY	2 cut(s)	137, 639
Bse1I	ACTGG	3 cut(s)	329, 637, 1411
BseBI	CCWGG	1 cut(s)	170
BseCI	ATCGAT	1 cut(s)	225
BseDI	CCNNGG	7 cut(s)	154, 169, 316, 396, 809, 915, 1074
BseGI	GGATG	5 cut(s)	147, 447, 582, 1044, 1357
BseLI	CCNNNNNNNGG	3 cut(s)	618, 1125, 1305
BseMII	CTCAG	5 cut(s)	483, 856, 1046, 1176, 1557
BseNI	ACTGG	3 cut(s)	329, 637, 1411
BseRI	GAGGAG	5 cut(s)	382, 553, 1321, 1324, 1457
BseSI	GKGCMC	1 cut(s)	176
BseX3I	CGGCCG	2 cut(s)	55, 641
BseXI	GCAGC	2 cut(s)	781, 1315
BsgI	GTGCAG	1 cut(s)	780
Bsh1236I	CGCG	3 cut(s)	192, 264, 404
Bsh1285I	CGRYCG	4 cut(s)	58, 393, 414, 644
BshNI	GGYRCC	3 cut(s)	140, 158, 173
BshVI	ATCGAT	1 cut(s)	225
BsiEI	CGRYCG	4 cut(s)	58, 393, 414, 644
BsiHKCI	CYCGRG	1 cut(s)	467
BsiSI	CCGG	5 cut(s)	54, 129, 138, 165, 640
BslFI	GGGAC	1 cut(s)	244
BslI	CCNNNNNNNGG	3 cut(s)	618, 1125, 1305
BsmAI	GTCTC	4 cut(s)	19, 55, 130, 1295
BsmBI	CGTCTC	3 cut(s)	19, 55, 130
BsmFI	GGGAC	1 cut(s)	244
BsmI	GAATGC	1 cut(s)	1070
Bso31I	GGTCTC	1 cut(s)	1295
BsoBI	CYCGRG	1 cut(s)	467
Bsp1286I	GDGCHC	1 cut(s)	176
Bsp1407I	TGTACA	1 cut(s)	1399
Bsp143I	GATC	9 cut(s)	201, 273, 285, 294, 390, 411, 1168, 1261, 1494
Bsp1720I	GCTNAGC	1 cut(s)	1069
Bsp19I	CCATGG	1 cut(s)	1074
BspCNI	CTCAG	5 cut(s)	484, 855, 1045, 1177, 1556
BspDI	ATCGAT	1 cut(s)	225
BspFNI	CGCG	3 cut(s)	192, 264, 404
BspHI	TCATGA	1 cut(s)	1141
BspLI	GGNNCC	6 cut(s)	133, 142, 160, 175, 894, 1263
BspPI	GGATC	3 cut(s)	1163, 1256, 1269
BspT107I	GGYRCC	3 cut(s)	140, 158, 173
BspTI	CTTAAG	1 cut(s)	1229
BspTNI	GGTCTC	1 cut(s)	1295
BsrFI	RCCGGY	2 cut(s)	137, 639
BsrGI	TGTACA	1 cut(s)	1399
BsrI	ACTGG	3 cut(s)	329, 637, 1411
BssAI	RCCGGY	2 cut(s)	137, 639
BssECI	CCNNGG	7 cut(s)	154, 169, 316, 396, 809, 915, 1074
BssMI	GATC	9 cut(s)	201, 273, 285, 294, 390, 411, 1168, 1261, 1494
BssNI	GRCGYC	4 cut(s)	48, 111, 123, 231
BssT1I	CCWWGG	3 cut(s)	316, 809, 1074
Bst2UI	CCWGG	1 cut(s)	170
Bst4CI	ACNGT	3 cut(s)	829, 859, 1138
Bst6I	CTCTTC	2 cut(s)	1146, 1485
BstACI	GRCGYC	4 cut(s)	48, 111, 123, 231
BstAFI	CTTAAG	1 cut(s)	1229
BstAUI	TGTACA	1 cut(s)	1399
BstC8I	GCNNGC	3 cut(s)	641, 849, 1384
BstDEI	CTNAG	7 cut(s)	492, 723, 842, 1032, 1069, 1185, 1543
BstDSI	CCRYGG	1 cut(s)	1074
BstENI	CCTNNNNNAGG	1 cut(s)	1303
BstF5I	GGATG	5 cut(s)	147, 447, 582, 1044, 1357
BstFNI	CGCG	3 cut(s)	192, 264, 404
BstH2I	RGCGCY	1 cut(s)	785
BstHHI	GCGC	3 cut(s)	266, 784, 853
BstKTI	GATC	9 cut(s)	204, 276, 288, 297, 393, 414, 1171, 1264, 1497
BstMAI	GTCTC	4 cut(s)	19, 55, 130, 1295
BstMBI	GATC	9 cut(s)	201, 273, 285, 294, 390, 411, 1168, 1261, 1494
BstMCI	CGRYCG	4 cut(s)	58, 393, 414, 644
BstMWI	GCNNNNNNNGC	9 cut(s)	18, 66, 75, 129, 138, 165, 287, 359, 401
BstNI	CCWGG	1 cut(s)	170
BstNSI	RCATGY	2 cut(s)	851, 1535
BstSCI	CCNGG	1 cut(s)	168
BstSLI	GKGCMC	1 cut(s)	176
BstUI	CGCG	3 cut(s)	192, 264, 404
BstV1I	GCAGC	2 cut(s)	781, 1315
BstX2I	RGATCY	2 cut(s)	201, 1261
BstYI	RGATCY	2 cut(s)	201, 1261
BstZI	CGGCCG	2 cut(s)	55, 641
Bsu15I	ATCGAT	1 cut(s)	225
BsuTUI	ATCGAT	1 cut(s)	225
BtgI	CCRYGG	1 cut(s)	1074
BtgZI	GCGATG	1 cut(s)	990
BtsCI	GGATG	5 cut(s)	147, 447, 582, 1044, 1357
BtsIMutI	CAGTG	3 cut(s)	630, 958, 1182
Cac8I	GCNNGC	3 cut(s)	641, 849, 1384
CciI	TCATGA	1 cut(s)	1141
CfoI	GCGC	3 cut(s)	266, 784, 853
Cfr10I	RCCGGY	2 cut(s)	137, 639
Cfr13I	GGNCC	1 cut(s)	131
ClaI	ATCGAT	1 cut(s)	225
CseI	GACGC	2 cut(s)	112, 393
Csp6I	GTAC	1 cut(s)	1400
CspCI	CAANNNNNGTGG	2 cut(s)	639, 674
CviAII	CATG	7 cut(s)	283, 385, 848, 1061, 1075, 1142, 1532
CviQI	GTAC	1 cut(s)	1400
DdeI	CTNAG	7 cut(s)	492, 723, 842, 1032, 1069, 1185, 1543
DpnI	GATC	9 cut(s)	203, 275, 287, 296, 392, 413, 1170, 1263, 1496
DpnII	GATC	9 cut(s)	201, 273, 285, 294, 390, 411, 1168, 1261, 1494
DraIII	CACNNNGTG	1 cut(s)	1188
DrdI	GACNNNNNNGTC	1 cut(s)	104
DseDI	GACNNNNNNGTC	1 cut(s)	104
EaeI	YGGCCR	6 cut(s)	55, 79, 166, 313, 634, 641
EagI	CGGCCG	2 cut(s)	55, 641
Eam1104I	CTCTTC	2 cut(s)	1146, 1485
EarI	CTCTTC	2 cut(s)	1146, 1485
EciI	GGCGGA	3 cut(s)	140, 230, 695
EclXI	CGGCCG	2 cut(s)	55, 641
Eco130I	CCWWGG	3 cut(s)	316, 809, 1074
Eco147I	AGGCCT	1 cut(s)	1298
Eco31I	GGTCTC	1 cut(s)	1295
Eco52I	CGGCCG	2 cut(s)	55, 641
Eco57I	CTGAAG	1 cut(s)	1413
Eco88I	CYCGRG	1 cut(s)	467
EcoNI	CCTNNNNNAGG	1 cut(s)	1303
EcoRI	GAATTC	2 cut(s)	532, 1341
EcoRII	CCWGG	1 cut(s)	168
EcoT14I	CCWWGG	3 cut(s)	316, 809, 1074
EcoT22I	ATGCAT	1 cut(s)	1359
ErhI	CCWWGG	3 cut(s)	316, 809, 1074
Esp3I	CGTCTC	3 cut(s)	19, 55, 130
FaeI	CATG	7 cut(s)	286, 388, 851, 1064, 1078, 1145, 1535
FalI	AAGNNNNNCTT	2 cut(s)	608, 640
FaqI	GGGAC	1 cut(s)	244
FatI	CATG	7 cut(s)	282, 384, 847, 1060, 1074, 1141, 1531
FauI	CCCGC	1 cut(s)	269
FblI	GTMKAC	2 cut(s)	108, 114
Fnu4HI	GCNGC	8 cut(s)	58, 79, 121, 637, 644, 795, 1271, 1329
FokI	GGATG	5 cut(s)	134, 454, 589, 1051, 1344
Fsp4HI	GCNGC	8 cut(s)	58, 79, 121, 637, 644, 795, 1271, 1329
FspBI	CTAG	1 cut(s)	897
GlaI	GCGC	3 cut(s)	265, 783, 852
GluI	GCNGC	8 cut(s)	58, 79, 121, 637, 644, 795, 1271, 1329
HaeII	RGCGCY	1 cut(s)	785
HapII	CCGG	5 cut(s)	54, 129, 138, 165, 640
HgaI	GACGC	2 cut(s)	112, 393
HhaI	GCGC	3 cut(s)	266, 784, 853
Hin1I	GRCGYC	4 cut(s)	48, 111, 123, 231
Hin1II	CATG	7 cut(s)	286, 388, 851, 1064, 1078, 1145, 1535
Hin6I	GCGC	3 cut(s)	264, 782, 851
HinP1I	GCGC	3 cut(s)	264, 782, 851
HincII	GTYRAC	1 cut(s)	109
HindII	GTYRAC	1 cut(s)	109
HindIII	AAGCTT	2 cut(s)	1052, 1220
HinfI	GANTC	5 cut(s)	693, 862, 911, 986, 1028
HpaII	CCGG	5 cut(s)	54, 129, 138, 165, 640
HphI	GGTGA	2 cut(s)	317, 871
Hpy166II	GTNNAC	3 cut(s)	109, 115, 1081
Hpy188I	TCNGA	7 cut(s)	43, 892, 916, 1024, 1207, 1378, 1393
Hpy188III	TCNNGA	8 cut(s)	337, 467, 625, 713, 1142, 1436, 1498, 1545
Hpy8I	GTNNAC	3 cut(s)	109, 115, 1081
Hpy99I	CGWCG	7 cut(s)	47, 50, 113, 272, 409, 425, 859
HpyAV	CCTTC	9 cut(s)	43, 154, 296, 784, 901, 1009, 1419, 1481, 1495
HpyCH4III	ACNGT	3 cut(s)	829, 859, 1138
HpyCH4IV	ACGT	5 cut(s)	48, 111, 231, 524, 1251
HpyCH4V	TGCA	7 cut(s)	21, 797, 980, 992, 1182, 1357, 1386
HpyF10VI	GCNNNNNNNGC	9 cut(s)	18, 66, 75, 129, 138, 165, 287, 359, 401
HpyF3I	CTNAG	7 cut(s)	492, 723, 842, 1032, 1069, 1185, 1543
HpySE526I	ACGT	5 cut(s)	48, 111, 231, 524, 1251
Hsp92I	GRCGYC	4 cut(s)	48, 111, 123, 231
Hsp92II	CATG	7 cut(s)	286, 388, 851, 1064, 1078, 1145, 1535
HspAI	GCGC	3 cut(s)	264, 782, 851
KroI	GCCGGC	1 cut(s)	639
KroNI	GCCGGC	1 cut(s)	641
Kzo9I	GATC	9 cut(s)	201, 273, 285, 294, 390, 411, 1168, 1261, 1494
LmnI	GCTCC	4 cut(s)	74, 549, 769, 892
Lsp1109I	GCAGC	2 cut(s)	781, 1315
LweI	GCATC	3 cut(s)	967, 1366, 1369
MaeI	CTAG	1 cut(s)	897
MaeII	ACGT	5 cut(s)	48, 111, 231, 524, 1251
MaeIII	GTNAC	4 cut(s)	232, 320, 525, 823
MalI	GATC	9 cut(s)	203, 275, 287, 296, 392, 413, 1170, 1263, 1496
MboI	GATC	9 cut(s)	201, 273, 285, 294, 390, 411, 1168, 1261, 1494
MflI	RGATCY	2 cut(s)	201, 1261
MhlI	GDGCHC	1 cut(s)	176
MluCI	AATT	7 cut(s)	22, 532, 970, 1088, 1208, 1341, 1452
MlyI	GAGTC	2 cut(s)	702, 995
MmeI	TCCRAC	5 cut(s)	51, 66, 96, 870, 1239
Mph1103I	ATGCAT	1 cut(s)	1359
MroNI	GCCGGC	1 cut(s)	639
MseI	TTAA	9 cut(s)	615, 744, 831, 1113, 1211, 1230, 1284, 1451, 1539
MslI	CAYNNNNRTG	1 cut(s)	1377
MspA1I	CMGCKG	2 cut(s)	699, 1036
MspCI	CTTAAG	1 cut(s)	1229
MspI	CCGG	5 cut(s)	54, 129, 138, 165, 640
MspR9I	CCNGG	1 cut(s)	170
Mva1269I	GAATGC	1 cut(s)	1070
MvaI	CCWGG	1 cut(s)	170
MvnI	CGCG	3 cut(s)	192, 264, 404
MwoI	GCNNNNNNNGC	9 cut(s)	18, 66, 75, 129, 138, 165, 287, 359, 401
NaeI	GCCGGC	1 cut(s)	641
NcoI	CCATGG	1 cut(s)	1074
NdeII	GATC	9 cut(s)	201, 273, 285, 294, 390, 411, 1168, 1261, 1494
NgoMIV	GCCGGC	1 cut(s)	639
NlaIII	CATG	7 cut(s)	286, 388, 851, 1064, 1078, 1145, 1535
NlaIV	GGNNCC	6 cut(s)	133, 142, 160, 175, 894, 1263
NmeAIII	GCCGAG	2 cut(s)	135, 421
NmuCI	GTSAC	1 cut(s)	232
NsiI	ATGCAT	1 cut(s)	1359
NspI	RCATGY	2 cut(s)	851, 1535
PaeI	GCATGC	1 cut(s)	851
PaeR7I	CTCGAG	1 cut(s)	467
PagI	TCATGA	1 cut(s)	1141
PceI	AGGCCT	1 cut(s)	1298
PciI	ACATGT	1 cut(s)	1531
PcsI	WCGNNNNNNNCGW	3 cut(s)	42, 420, 426
PctI	GAATGC	1 cut(s)	1070
PdiI	GCCGGC	1 cut(s)	641
PfeI	GAWTC	3 cut(s)	862, 911, 1028
PflFI	GACNNNGTC	1 cut(s)	47
PflMI	CCANNNNNTGG	1 cut(s)	618
PkrI	GCNGC	8 cut(s)	59, 80, 122, 638, 645, 796, 1272, 1330
Ple19I	CGATCG	2 cut(s)	393, 414
PleI	GAGTC	2 cut(s)	701, 994
PpsI	GAGTC	2 cut(s)	701, 994
PscI	ACATGT	1 cut(s)	1531
Psp6I	CCWGG	1 cut(s)	168
PspGI	CCWGG	1 cut(s)	168
PspN4I	GGNNCC	6 cut(s)	133, 142, 160, 175, 894, 1263
PspPI	GGNCC	1 cut(s)	131
PsuI	RGATCY	2 cut(s)	201, 1261
PsyI	GACNNNGTC	1 cut(s)	47
PvuI	CGATCG	2 cut(s)	393, 414
RsaI	GTAC	1 cut(s)	1401
RsaNI	GTAC	1 cut(s)	1400
RseI	CAYNNNNRTG	1 cut(s)	1377
SalI	GTCGAC	1 cut(s)	107
SaqAI	TTAA	9 cut(s)	615, 744, 831, 1113, 1211, 1230, 1284, 1451, 1539
SatI	GCNGC	8 cut(s)	58, 79, 121, 637, 644, 795, 1271, 1329
Sau3AI	GATC	9 cut(s)	201, 273, 285, 294, 390, 411, 1168, 1261, 1494
Sau96I	GGNCC	1 cut(s)	131
SchI	GAGTC	2 cut(s)	702, 995
ScrFI	CCNGG	1 cut(s)	170
SduI	GDGCHC	1 cut(s)	176
SfaNI	GCATC	3 cut(s)	967, 1366, 1369
Sfr274I	CTCGAG	1 cut(s)	467
SlaI	CTCGAG	1 cut(s)	467
SmiMI	CAYNNNNRTG	1 cut(s)	1377
SmlI	CTYRAG	3 cut(s)	467, 1229, 1292
SmoI	CTYRAG	3 cut(s)	467, 1229, 1292
SphI	GCATGC	1 cut(s)	851
Sse9I	AATT	7 cut(s)	22, 532, 970, 1088, 1208, 1341, 1452
SseBI	AGGCCT	1 cut(s)	1298
SspI	AATATT	1 cut(s)	1237
SspMI	CTAG	1 cut(s)	897
StuI	AGGCCT	1 cut(s)	1298
StyD4I	CCNGG	1 cut(s)	168
StyI	CCWWGG	3 cut(s)	316, 809, 1074
TaaI	ACNGT	3 cut(s)	829, 859, 1138
TaiI	ACGT	5 cut(s)	51, 114, 234, 527, 1254
TaqI	TCGA	6 cut(s)	96, 108, 225, 468, 536, 1497
TasI	AATT	7 cut(s)	22, 532, 970, 1088, 1208, 1341, 1452
TatI	WGTACW	1 cut(s)	1399
TauI	GCSGC	6 cut(s)	60, 81, 123, 639, 646, 1273
TfiI	GAWTC	3 cut(s)	862, 911, 1028
Tru1I	TTAA	9 cut(s)	615, 744, 831, 1113, 1211, 1230, 1284, 1451, 1539
Tru9I	TTAA	9 cut(s)	615, 744, 831, 1113, 1211, 1230, 1284, 1451, 1539
TscAI	CASTG	3 cut(s)	637, 958, 1189
TseFI	GTSAC	1 cut(s)	232
TseI	GCWGC	2 cut(s)	794, 1328
Tsp45I	GTSAC	1 cut(s)	232
TspDTI	ATGAA	8 cut(s)	136, 593, 1064, 1077, 1130, 1158, 1334, 1463
TspRI	CASTG	3 cut(s)	637, 958, 1189
Tth111I	GACNNNGTC	1 cut(s)	47
Van91I	CCANNNNNTGG	1 cut(s)	618
Vha464I	CTTAAG	1 cut(s)	1229
XagI	CCTNNNNNAGG	1 cut(s)	1303
XapI	RAATTY	3 cut(s)	532, 1088, 1341
XceI	RCATGY	2 cut(s)	851, 1535
XhoI	CTCGAG	1 cut(s)	467
XmiI	GTMKAC	2 cut(s)	108, 114
XspI	CTAG	1 cut(s)	897
ZraI	GACGTC	3 cut(s)	49, 112, 232
Zsp2I	ATGCAT	1 cut(s)	1359

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.