Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0014376

Physical Location & Seq

Genomic Coordinates Reverse (-)

87299308 .. 87300863

Gene Structure 1556 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00065680.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1539 bp

ATGCCCATCTGCGTCTCCTGCAATTCCAACTCCTTCACCTCCGACGACGTCTCCGGCCGCCTCTACTGCTCCAACTGCGGCCACCTCCAAGACTTCGACAACTTCGTCGACGTCTACGGCGGCGTCTCCGGCCCCACCGGCACCTTTATCCGCCTCGGCACCTCCGGCCAGGGCACCGACTACCACTACCGCGAAACCAAGATCTACGAGGCCAAGAAACTCATCGATGAGGTCACTCTCCGCCTCAACCTCTCGCCGTCCCGCGCCGACGAGATCAAGGCCATGATCGCCAAGATCACCGAAGGTGAGTTCGGCCAAGGTAACTGGTTCAATGTCTTGATCGGTGCTTGTGCTTATGTTGCTATGAGGAGGGATAGCAAGTCCATGCCGATGGCCGAGGTCGCGTCGGCGATCGGCTGCGACGATTACGAGCTTGGTAGGATGATTATGCGTGTTGTTGATTTTCTCGAGTTGAAAAAACCTGATTTCCCTGAGTTTGATATTGACGTTACAGAATTCGAGGAGGTTTGGGAGTTTAGGGGGAGTGTGAGGGAGAGGATGAAGAAGCAGGGGATTTTTTTGATACAATGTGCTATTAAGTGGTTCTTGACCACTGGCCGCCGGCCGCTTCCGATGGTGGTGGCGATTTTGGTTCTGGTGGCCGAGTTGAATGGAGTCGGCGGTGTTAGTATTCAGGATTGTGCTAAGGAAGTCAATGCTGTTGTTAATACTTGTAGGTTGAGGTATAGGGAGCTTTTAGAGGCGCTTGTGAAGGCTGCGCAGGTGTTGCCTTGGGGGAAGGATGTTACGGTTAAAAATGTTCTCAGGCATGCGCCGACGGTGATTCAGTATATGGAGAAGAAGTCTATGTCGGAGCCTAGAGGGAAGGAGGATTCCGAGGGTGGTGTTGGGATTGATTTGAGAGATGTGGTCAGTGAGTGTTTGGGGAGGAATTGCGATGCAGATGAGTCTGCAACAGAAGTTGAAAAGTTGAGGAAGGTTTCAGATGATTCTCGGCGGATGGATAAGATGAAGCTTTCGCATGAATGCTTAGCCATGGTTTACTCAAAATTTTTAGATGAGATGGAGAATTTTAAGTCCTCTGGTGGGTTTGGAACAGTTCATGAAAGAGAAGAGAGGCAGTATTTTGATCCCCATGATTGCACTGAGTGGTGGAATGGGAAGTCAGAATTAAGCAAGAAGCTTCTGCTTAAGAATATTTTGGAGAAGGACGTAGGGTTGGATCCTATGCCGCCATCTTATGTTAAGGGTCTCAAGGCCTGTAAGAAGAGGAGAGAAAGGATAAATGCTGCCAAACAGCGAATTCATAAGATTATGCATCCATCAAATGCTCATTCAGATGCTTGCATTTCTGAAGATGTACAGACTGGAAGAAAAAGAAAGAGAAGGCATACTCTTGATTGGGAAGATTTAATTATTGAAACCCTCCTCCTTCATCAAGTAAAAGAAGAGGAGATTGAGAAGGGGTGGTATAATAGCTTATTAGATTTACATGTATTTAACTCTGGAGTTGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000126 GO:0001016 GO:0001032 GO:0001067 GO:0001085 GO:0001091 GO:0001093 GO:0001098 GO:0001099 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0006355 GO:0006359 GO:0006950 GO:0006979 GO:0007275 GO:0008134 GO:0008150 GO:0009790 GO:0009791 GO:0009793 GO:0009846 GO:0009856 GO:0009889 GO:0009987 GO:0010154 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019899 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0034599 GO:0042221 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044212 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044706 GO:0044798 GO:0046983 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0070063 GO:0070887 GO:0080090 GO:0090576 GO:0097159 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TF_Zn_Ribbon

Protein Analysis

512

Amino Acids

58.12

Weight (kDa)

6.13

Isoelectric Point (pI)

44.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BRF2-like_C_cyclin_rpt	PF21886	183 - 283	8.1e-07	BRF2-like, C-terminal cyclin repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014376)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35540
fragaria_vesca	FvH4_6g24910
malus_domestica	MD05G1301900.v1.1
prunus_persica	Prupe.4G060500_v2.0.a1
pyrus_communis	pycom05g27950
rosa_chinensis	RchiOBHm_Chr5g0010711
rosa_laevigata	RLG00000031773
rosa_multiflora	Rmu_sc0007447.1_g000001
rosa_roxburghii	Rroxscaffold_1G00065680
rosa_rugosa	Rorug04G0451700 Rorug04G0451800
rosa_samantha	Rh5AG083500 Rh5BG078700 Rh5CG091500 Rh5DG078900
rosa_wichuraiana	Rw0G000630 Rw0G022330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	772
AasI	GACNNNNNNGTC	1 cut(s)	104
AatII	GACGTC	2 cut(s)	51, 114
Acc16I	TGCGCA	1 cut(s)	780
Acc36I	ACCTGC	1 cut(s)	772
AccB1I	GGYRCC	3 cut(s)	140, 158, 173
AccI	GTMKAC	2 cut(s)	108, 114
AccII	CGCG	3 cut(s)	192, 264, 404
AclWI	GGATC	3 cut(s)	1145, 1238, 1251
AcoI	YGGCCR	8 cut(s)	55, 79, 166, 313, 393, 616, 623, 660
AcsI	RAATTY	4 cut(s)	515, 1070, 1090, 1323
AcuI	CTGAAG	1 cut(s)	1395
AcyI	GRCGYC	3 cut(s)	48, 111, 123
AdeI	CACNNNGTG	1 cut(s)	1170
AfaI	GTAC	1 cut(s)	1383
AfiI	CCNNNNNNNGG	1 cut(s)	1107
AflII	CTTAAG	1 cut(s)	1211
AflIII	ACRYGT	1 cut(s)	1513
AgsI	TTSAA	5 cut(s)	331, 475, 670, 986, 1442
AjnI	CCWGG	1 cut(s)	168
AluBI	AGCT	5 cut(s)	433, 754, 1036, 1204, 1500
AluI	AGCT	5 cut(s)	433, 754, 1036, 1204, 1500
Alw26I	GTCTC	4 cut(s)	19, 55, 130, 1277
AlwI	GGATC	3 cut(s)	1145, 1238, 1251
Ama87I	CYCGRG	1 cut(s)	467
ApeKI	GCWGC	3 cut(s)	417, 776, 1310
ApoI	RAATTY	4 cut(s)	515, 1070, 1090, 1323
AspLEI	GCGC	4 cut(s)	266, 766, 781, 835
AspS9I	GGNCC	1 cut(s)	131
AsuHPI	GGTGA	4 cut(s)	28, 289, 317, 853
AvaI	CYCGRG	1 cut(s)	467
BaeGI	GKGCMC	1 cut(s)	176
BamHI	GGATCC	1 cut(s)	1243
BanI	GGYRCC	3 cut(s)	140, 158, 173
BbvI	GCAGC	3 cut(s)	404, 763, 1297
BccI	CCATC	7 cut(s)	14, 385, 628, 1015, 1078, 1264, 1351
BceAI	ACGGC	2 cut(s)	133, 241
BciT130I	CCWGG	1 cut(s)	170
BcoDI	GTCTC	4 cut(s)	19, 55, 130, 1277
BfaI	CTAG	1 cut(s)	879
BfoI	RGCGCY	1 cut(s)	767
BfrI	CTTAAG	1 cut(s)	1211
BfuAI	ACCTGC	1 cut(s)	772
BglI	GCCNNNNNGGC	1 cut(s)	138
BglII	AGATCT	1 cut(s)	201
BisI	GCNGC	9 cut(s)	58, 79, 121, 418, 619, 626, 777, 1253, 1311
BlpI	GCTNAGC	1 cut(s)	1051
BlsI	GCNGC	9 cut(s)	59, 80, 122, 419, 620, 627, 778, 1254, 1312
Bme1390I	CCNGG	1 cut(s)	170
BmeT110I	CYCGRG	1 cut(s)	467
BmgT120I	GGNCC	1 cut(s)	131
BmiI	GGNNCC	6 cut(s)	133, 142, 160, 175, 876, 1245
BmrFI	CCNGG	1 cut(s)	170
BmsI	GCATC	3 cut(s)	949, 1348, 1351
Bpu10I	CCTNAGC	1 cut(s)	705
Bpu1102I	GCTNAGC	1 cut(s)	1051
BpuEI	CTTGAG	1 cut(s)	1259
Bsa29I	ATCGAT	1 cut(s)	225
BsaHI	GRCGYC	3 cut(s)	48, 111, 123
BsaI	GGTCTC	1 cut(s)	1277
BsaJI	CCNNGG	7 cut(s)	154, 169, 316, 396, 791, 897, 1056
BsaXI	ACNNNNNCTCC	4 cut(s)	35, 65, 848, 878
Bsc4I	CCNNNNNNNGG	1 cut(s)	1107
Bse118I	RCCGGY	2 cut(s)	137, 621
Bse1I	ACTGG	3 cut(s)	329, 619, 1393
BseBI	CCWGG	1 cut(s)	170
BseCI	ATCGAT	1 cut(s)	225
BseDI	CCNNGG	7 cut(s)	154, 169, 316, 396, 791, 897, 1056
BseGI	GGATG	5 cut(s)	447, 564, 808, 1026, 1339
BseLI	CCNNNNNNNGG	1 cut(s)	1107
BseMII	CTCAG	3 cut(s)	483, 838, 1158
BseNI	ACTGG	3 cut(s)	329, 619, 1393
BseRI	GAGGAG	5 cut(s)	382, 536, 1306, 1439, 1487
BseSI	GKGCMC	1 cut(s)	176
BseX3I	CGGCCG	2 cut(s)	55, 623
BseXI	GCAGC	3 cut(s)	404, 763, 1297
Bsh1236I	CGCG	3 cut(s)	192, 264, 404
Bsh1285I	CGRYCG	3 cut(s)	58, 414, 626
BshNI	GGYRCC	3 cut(s)	140, 158, 173
BshVI	ATCGAT	1 cut(s)	225
BsiEI	CGRYCG	3 cut(s)	58, 414, 626
BsiHKCI	CYCGRG	1 cut(s)	467
BsiSI	CCGG	5 cut(s)	54, 129, 138, 165, 622
BslFI	GGGAC	1 cut(s)	244
BslI	CCNNNNNNNGG	1 cut(s)	1107
BsmAI	GTCTC	4 cut(s)	19, 55, 130, 1277
BsmBI	CGTCTC	3 cut(s)	19, 55, 130
BsmFI	GGGAC	1 cut(s)	244
BsmI	GAATGC	1 cut(s)	1052
Bso31I	GGTCTC	1 cut(s)	1277
BsoBI	CYCGRG	1 cut(s)	467
Bsp1286I	GDGCHC	1 cut(s)	176
Bsp1407I	TGTACA	1 cut(s)	1381
Bsp143I	GATC	8 cut(s)	201, 273, 285, 294, 339, 411, 1150, 1243
Bsp1720I	GCTNAGC	1 cut(s)	1051
Bsp19I	CCATGG	1 cut(s)	1056
BspCNI	CTCAG	3 cut(s)	484, 837, 1159
BspDI	ATCGAT	1 cut(s)	225
BspFNI	CGCG	3 cut(s)	192, 264, 404
BspHI	TCATGA	1 cut(s)	1123
BspLI	GGNNCC	6 cut(s)	133, 142, 160, 175, 876, 1245
BspMI	ACCTGC	1 cut(s)	772
BspPI	GGATC	3 cut(s)	1145, 1238, 1251
BspT107I	GGYRCC	3 cut(s)	140, 158, 173
BspTI	CTTAAG	1 cut(s)	1211
BspTNI	GGTCTC	1 cut(s)	1277
BsrFI	RCCGGY	2 cut(s)	137, 621
BsrGI	TGTACA	1 cut(s)	1381
BsrI	ACTGG	3 cut(s)	329, 619, 1393
BssAI	RCCGGY	2 cut(s)	137, 621
BssECI	CCNNGG	7 cut(s)	154, 169, 316, 396, 791, 897, 1056
BssMI	GATC	8 cut(s)	201, 273, 285, 294, 339, 411, 1150, 1243
BssNI	GRCGYC	3 cut(s)	48, 111, 123
BssT1I	CCWWGG	3 cut(s)	316, 791, 1056
Bst2UI	CCWGG	1 cut(s)	170
Bst4CI	ACNGT	3 cut(s)	811, 841, 1120
Bst6I	CTCTTC	3 cut(s)	1128, 1283, 1464
BstACI	GRCGYC	3 cut(s)	48, 111, 123
BstAFI	CTTAAG	1 cut(s)	1211
BstAPI	GCANNNNNTGC	1 cut(s)	787
BstAUI	TGTACA	1 cut(s)	1381
BstC8I	GCNNGC	3 cut(s)	623, 831, 1366
BstDEI	CTNAG	5 cut(s)	492, 705, 824, 1051, 1167
BstDSI	CCRYGG	1 cut(s)	1056
BstF5I	GGATG	5 cut(s)	447, 564, 808, 1026, 1339
BstFNI	CGCG	3 cut(s)	192, 264, 404
BstH2I	RGCGCY	1 cut(s)	767
BstHHI	GCGC	4 cut(s)	266, 766, 781, 835
BstKTI	GATC	8 cut(s)	204, 276, 288, 297, 342, 414, 1153, 1246
BstMAI	GTCTC	4 cut(s)	19, 55, 130, 1277
BstMBI	GATC	8 cut(s)	201, 273, 285, 294, 339, 411, 1150, 1243
BstMCI	CGRYCG	3 cut(s)	58, 414, 626
BstNI	CCWGG	1 cut(s)	170
BstNSI	RCATGY	2 cut(s)	833, 1517
BstSCI	CCNGG	1 cut(s)	168
BstSLI	GKGCMC	1 cut(s)	176
BstUI	CGCG	3 cut(s)	192, 264, 404
BstV1I	GCAGC	3 cut(s)	404, 763, 1297
BstX2I	RGATCY	2 cut(s)	201, 1243
BstXI	CCANNNNNNTGG	1 cut(s)	391
BstYI	RGATCY	2 cut(s)	201, 1243
BstZI	CGGCCG	2 cut(s)	55, 623
Bsu15I	ATCGAT	1 cut(s)	225
BsuTUI	ATCGAT	1 cut(s)	225
BtgI	CCRYGG	1 cut(s)	1056
BtgZI	GCGATG	1 cut(s)	972
BtsCI	GGATG	5 cut(s)	447, 564, 808, 1026, 1339
BtsIMutI	CAGTG	3 cut(s)	612, 940, 1164
BveI	ACCTGC	1 cut(s)	772
Cac8I	GCNNGC	3 cut(s)	623, 831, 1366
CciI	TCATGA	1 cut(s)	1123
CfoI	GCGC	4 cut(s)	266, 766, 781, 835
Cfr10I	RCCGGY	2 cut(s)	137, 621
Cfr13I	GGNCC	1 cut(s)	131
ClaI	ATCGAT	1 cut(s)	225
CseI	GACGC	2 cut(s)	112, 393
Csp6I	GTAC	1 cut(s)	1382
CviAII	CATG	8 cut(s)	283, 385, 830, 1043, 1057, 1124, 1157, 1514
CviQI	GTAC	1 cut(s)	1382
DdeI	CTNAG	5 cut(s)	492, 705, 824, 1051, 1167
DpnI	GATC	8 cut(s)	203, 275, 287, 296, 341, 413, 1152, 1245
DpnII	GATC	8 cut(s)	201, 273, 285, 294, 339, 411, 1150, 1243
DraIII	CACNNNGTG	1 cut(s)	1170
DrdI	GACNNNNNNGTC	1 cut(s)	104
DseDI	GACNNNNNNGTC	1 cut(s)	104
EaeI	YGGCCR	8 cut(s)	55, 79, 166, 313, 393, 616, 623, 660
EagI	CGGCCG	2 cut(s)	55, 623
Eam1104I	CTCTTC	3 cut(s)	1128, 1283, 1464
EarI	CTCTTC	3 cut(s)	1128, 1283, 1464
EciI	GGCGGA	3 cut(s)	140, 230, 1033
EclXI	CGGCCG	2 cut(s)	55, 623
Eco130I	CCWWGG	3 cut(s)	316, 791, 1056
Eco147I	AGGCCT	1 cut(s)	1280
Eco31I	GGTCTC	1 cut(s)	1277
Eco52I	CGGCCG	2 cut(s)	55, 623
Eco57I	CTGAAG	1 cut(s)	1395
Eco88I	CYCGRG	1 cut(s)	467
EcoRI	GAATTC	2 cut(s)	515, 1323
EcoRII	CCWGG	1 cut(s)	168
EcoT14I	CCWWGG	3 cut(s)	316, 791, 1056
EcoT22I	ATGCAT	1 cut(s)	1341
ErhI	CCWWGG	3 cut(s)	316, 791, 1056
Esp3I	CGTCTC	3 cut(s)	19, 55, 130
FaeI	CATG	8 cut(s)	286, 388, 833, 1046, 1060, 1127, 1160, 1517
FalI	AAGNNNNNCTT	2 cut(s)	590, 622
FaqI	GGGAC	1 cut(s)	244
FatI	CATG	8 cut(s)	282, 384, 829, 1042, 1056, 1123, 1156, 1513
FauI	CCCGC	1 cut(s)	269
FblI	GTMKAC	2 cut(s)	108, 114
Fnu4HI	GCNGC	9 cut(s)	58, 79, 121, 418, 619, 626, 777, 1253, 1311
FokI	GGATG	5 cut(s)	454, 571, 815, 1033, 1326
Fsp4HI	GCNGC	9 cut(s)	58, 79, 121, 418, 619, 626, 777, 1253, 1311
FspBI	CTAG	1 cut(s)	879
FspI	TGCGCA	1 cut(s)	780
GlaI	GCGC	4 cut(s)	265, 765, 780, 834
GluI	GCNGC	9 cut(s)	58, 79, 121, 418, 619, 626, 777, 1253, 1311
HaeII	RGCGCY	1 cut(s)	767
HapII	CCGG	5 cut(s)	54, 129, 138, 165, 622
HgaI	GACGC	2 cut(s)	112, 393
HhaI	GCGC	4 cut(s)	266, 766, 781, 835
Hin1I	GRCGYC	3 cut(s)	48, 111, 123
Hin1II	CATG	8 cut(s)	286, 388, 833, 1046, 1060, 1127, 1160, 1517
Hin6I	GCGC	4 cut(s)	264, 764, 779, 833
HinP1I	GCGC	4 cut(s)	264, 764, 779, 833
HincII	GTYRAC	1 cut(s)	109
HindII	GTYRAC	1 cut(s)	109
HindIII	AAGCTT	2 cut(s)	1034, 1202
HinfI	GANTC	5 cut(s)	675, 844, 893, 968, 1010
HpaII	CCGG	5 cut(s)	54, 129, 138, 165, 622
HphI	GGTGA	4 cut(s)	28, 289, 317, 853
Hpy166II	GTNNAC	3 cut(s)	109, 115, 1063
Hpy188I	TCNGA	8 cut(s)	43, 633, 874, 898, 1006, 1189, 1360, 1375
Hpy188III	TCNNGA	7 cut(s)	337, 467, 607, 695, 1124, 1418, 1527
Hpy8I	GTNNAC	3 cut(s)	109, 115, 1063
Hpy99I	CGWCG	8 cut(s)	47, 50, 110, 113, 272, 409, 425, 841
HpyCH4III	ACNGT	3 cut(s)	811, 841, 1120
HpyCH4IV	ACGT	4 cut(s)	48, 111, 507, 1233
HpyCH4V	TGCA	6 cut(s)	21, 962, 974, 1164, 1339, 1368
HpyF3I	CTNAG	5 cut(s)	492, 705, 824, 1051, 1167
HpySE526I	ACGT	4 cut(s)	48, 111, 507, 1233
Hsp92I	GRCGYC	3 cut(s)	48, 111, 123
Hsp92II	CATG	8 cut(s)	286, 388, 833, 1046, 1060, 1127, 1160, 1517
HspAI	GCGC	4 cut(s)	264, 764, 779, 833
KroI	GCCGGC	1 cut(s)	621
KroNI	GCCGGC	1 cut(s)	623
Kzo9I	GATC	8 cut(s)	201, 273, 285, 294, 339, 411, 1150, 1243
LmnI	GCTCC	3 cut(s)	74, 751, 874
Lsp1109I	GCAGC	3 cut(s)	404, 763, 1297
LweI	GCATC	3 cut(s)	949, 1348, 1351
MaeI	CTAG	1 cut(s)	879
MaeII	ACGT	4 cut(s)	48, 111, 507, 1233
MaeIII	GTNAC	4 cut(s)	232, 320, 508, 805
MalI	GATC	8 cut(s)	203, 275, 287, 296, 341, 413, 1152, 1245
MboI	GATC	8 cut(s)	201, 273, 285, 294, 339, 411, 1150, 1243
MboII	GAAGA	8 cut(s)	574, 871, 1145, 1300, 1388, 1404, 1439, 1481
MflI	RGATCY	2 cut(s)	201, 1243
MhlI	GDGCHC	1 cut(s)	176
MluCI	AATT	8 cut(s)	22, 515, 952, 1070, 1090, 1190, 1323, 1434
MlyI	GAGTC	2 cut(s)	684, 977
MmeI	TCCRAC	5 cut(s)	51, 66, 96, 852, 1221
Mph1103I	ATGCAT	1 cut(s)	1341
MroNI	GCCGGC	1 cut(s)	621
MseI	TTAA	9 cut(s)	597, 726, 813, 1095, 1193, 1212, 1266, 1433, 1521
MslI	CAYNNNNRTG	2 cut(s)	389, 1359
MspCI	CTTAAG	1 cut(s)	1211
MspI	CCGG	5 cut(s)	54, 129, 138, 165, 622
MspR9I	CCNGG	1 cut(s)	170
Mva1269I	GAATGC	1 cut(s)	1052
MvaI	CCWGG	1 cut(s)	170
MvnI	CGCG	3 cut(s)	192, 264, 404
NaeI	GCCGGC	1 cut(s)	623
NcoI	CCATGG	1 cut(s)	1056
NdeII	GATC	8 cut(s)	201, 273, 285, 294, 339, 411, 1150, 1243
NgoMIV	GCCGGC	1 cut(s)	621
NlaIII	CATG	8 cut(s)	286, 388, 833, 1046, 1060, 1127, 1160, 1517
NlaIV	GGNNCC	6 cut(s)	133, 142, 160, 175, 876, 1245
NmeAIII	GCCGAG	4 cut(s)	135, 421, 688, 994
NmuCI	GTSAC	1 cut(s)	232
NsbI	TGCGCA	1 cut(s)	780
NsiI	ATGCAT	1 cut(s)	1341
NspI	RCATGY	2 cut(s)	833, 1517
PaeI	GCATGC	1 cut(s)	833
PaeR7I	CTCGAG	1 cut(s)	467
PagI	TCATGA	1 cut(s)	1123
PaqCI	CACCTGC	1 cut(s)	772
PceI	AGGCCT	1 cut(s)	1280
PciI	ACATGT	1 cut(s)	1513
PcsI	WCGNNNNNNNCGW	2 cut(s)	102, 420
PctI	GAATGC	1 cut(s)	1052
PdiI	GCCGGC	1 cut(s)	623
PfeI	GAWTC	3 cut(s)	844, 893, 1010
PflFI	GACNNNGTC	1 cut(s)	47
PkrI	GCNGC	9 cut(s)	59, 80, 122, 419, 620, 627, 778, 1254, 1312
Ple19I	CGATCG	1 cut(s)	414
PleI	GAGTC	2 cut(s)	683, 976
PpsI	GAGTC	2 cut(s)	683, 976
PscI	ACATGT	1 cut(s)	1513
Psp6I	CCWGG	1 cut(s)	168
PspGI	CCWGG	1 cut(s)	168
PspN4I	GGNNCC	6 cut(s)	133, 142, 160, 175, 876, 1245
PspPI	GGNCC	1 cut(s)	131
PsuI	RGATCY	2 cut(s)	201, 1243
PsyI	GACNNNGTC	1 cut(s)	47
PvuI	CGATCG	1 cut(s)	414
RsaI	GTAC	1 cut(s)	1383
RsaNI	GTAC	1 cut(s)	1382
RseI	CAYNNNNRTG	2 cut(s)	389, 1359
SalI	GTCGAC	1 cut(s)	107
SaqAI	TTAA	9 cut(s)	597, 726, 813, 1095, 1193, 1212, 1266, 1433, 1521
SatI	GCNGC	9 cut(s)	58, 79, 121, 418, 619, 626, 777, 1253, 1311
Sau3AI	GATC	8 cut(s)	201, 273, 285, 294, 339, 411, 1150, 1243
Sau96I	GGNCC	1 cut(s)	131
SchI	GAGTC	2 cut(s)	684, 977
ScrFI	CCNGG	1 cut(s)	170
SduI	GDGCHC	1 cut(s)	176
SfaNI	GCATC	3 cut(s)	949, 1348, 1351
Sfr274I	CTCGAG	1 cut(s)	467
SgrDI	CGTCGACG	1 cut(s)	107
SlaI	CTCGAG	1 cut(s)	467
SmiMI	CAYNNNNRTG	2 cut(s)	389, 1359
SmlI	CTYRAG	3 cut(s)	467, 1211, 1274
SmoI	CTYRAG	3 cut(s)	467, 1211, 1274
SphI	GCATGC	1 cut(s)	833
Sse9I	AATT	8 cut(s)	22, 515, 952, 1070, 1090, 1190, 1323, 1434
SseBI	AGGCCT	1 cut(s)	1280
SspI	AATATT	1 cut(s)	1219
SspMI	CTAG	1 cut(s)	879
StuI	AGGCCT	1 cut(s)	1280
StyD4I	CCNGG	1 cut(s)	168
StyI	CCWWGG	3 cut(s)	316, 791, 1056
TaaI	ACNGT	3 cut(s)	811, 841, 1120
TaiI	ACGT	4 cut(s)	51, 114, 510, 1236
TaqI	TCGA	5 cut(s)	96, 108, 225, 468, 519
TasI	AATT	8 cut(s)	22, 515, 952, 1070, 1090, 1190, 1323, 1434
TatI	WGTACW	1 cut(s)	1381
TauI	GCSGC	6 cut(s)	60, 81, 123, 621, 628, 1255
TfiI	GAWTC	3 cut(s)	844, 893, 1010
Tru1I	TTAA	9 cut(s)	597, 726, 813, 1095, 1193, 1212, 1266, 1433, 1521
Tru9I	TTAA	9 cut(s)	597, 726, 813, 1095, 1193, 1212, 1266, 1433, 1521
TscAI	CASTG	3 cut(s)	619, 940, 1171
TseFI	GTSAC	1 cut(s)	232
TseI	GCWGC	3 cut(s)	417, 776, 1310
Tsp45I	GTSAC	1 cut(s)	232
TspDTI	ATGAA	7 cut(s)	575, 1046, 1059, 1112, 1140, 1316, 1445
TspRI	CASTG	3 cut(s)	619, 940, 1171
Tth111I	GACNNNGTC	1 cut(s)	47
Vha464I	CTTAAG	1 cut(s)	1211
XapI	RAATTY	4 cut(s)	515, 1070, 1090, 1323
XceI	RCATGY	2 cut(s)	833, 1517
XhoI	CTCGAG	1 cut(s)	467
XmiI	GTMKAC	2 cut(s)	108, 114
XspI	CTAG	1 cut(s)	879
ZraI	GACGTC	2 cut(s)	49, 112
Zsp2I	ATGCAT	1 cut(s)	1341

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.