transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G06230 AT1G06230 AT1G06230 AT1G06230 |
| fragaria_vesca | FvH4_6g27070 FvH4_6g27070 FvH4_6g27070 FvH4_6g27070 FvH4_6g27070 |
| malus_domestica | MD09G1240500.v1.1 MD17G1233300.v1.1 |
| prunus_persica | Prupe.3G124500_v2.0.a1 Prupe.3G124500_v2.0.a1 Prupe.3G124500_v2.0.a1 Prupe.3G124500_v2.0.a1 Prupe.3G124500_v2.0.a1 Prupe.3G124500_v2.0.a1 Prupe.3G124500_v2.0.a1 Prupe.3G124500_v2.0.a1 Prupe.3G124500_v2.0.a1 Prupe.3G124500_v2.0.a1 |
| pyrus_communis | pycom09g15900 pycom17g23630 |
| rosa_chinensis | RchiOBHm_Chr2g0129031 |
| rosa_laevigata | RLG00000019045 |
| rosa_multiflora | Rmu_sc0009747.1_g000004 |
| rosa_rugosa | Rorug02G0283500 Rorug02G0283500 |
| rosa_samantha | Rh2AG336000 Rh2BG344000 Rh2CG322900 Rh2DG360600 |
| rosa_wichuraiana | Rw2G027240 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1308 |
| AarI | CACCTGC | 1 cut(s) | 484 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 541 |
| Acc36I | ACCTGC | 1 cut(s) | 484 |
| AccI | GTMKAC | 4 cut(s) | 72, 974, 1576, 1824 |
| AclWI | GGATC | 9 cut(s) | 1418, 1442, 1455, 1508, 1521, 1847, 1960, 2005, 2017 |
| AcoI | YGGCCR | 1 cut(s) | 882 |
| AcsI | RAATTY | 4 cut(s) | 313, 352, 1175, 1624 |
| AcuI | CTGAAG | 3 cut(s) | 717, 956, 1566 |
| AfaI | GTAC | 4 cut(s) | 966, 1129, 1160, 1605 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 20, 309, 335, 633, 1479, 1804 |
| AgsI | TTSAA | 7 cut(s) | 395, 496, 931, 997, 1658, 1875, 1929 |
| AhlI | ACTAGT | 1 cut(s) | 1777 |
| AjnI | CCWGG | 5 cut(s) | 1139, 1451, 1569, 1809, 1896 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1849, 1881 |
| Alw21I | GWGCWC | 1 cut(s) | 59 |
| Alw26I | GTCTC | 5 cut(s) | 165, 345, 1186, 1310, 1679 |
| AlwI | GGATC | 9 cut(s) | 1418, 1442, 1455, 1508, 1521, 1847, 1960, 2005, 2017 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1994 |
| Ama87I | CYCGRG | 1 cut(s) | 1229 |
| AoxI | GGCC | 7 cut(s) | 11, 624, 761, 882, 1454, 1806, 1812 |
| ApeKI | GCWGC | 6 cut(s) | 49, 164, 398, 455, 943, 1932 |
| ApoI | RAATTY | 4 cut(s) | 313, 352, 1175, 1624 |
| AspA2I | CCTAGG | 1 cut(s) | 1478 |
| AspS9I | GGNCC | 5 cut(s) | 11, 837, 1482, 1807, 1813 |
| AsuC2I | CCSGG | 3 cut(s) | 646, 1230, 1231 |
| AsuHPI | GGTGA | 4 cut(s) | 41, 265, 419, 622 |
| AvaI | CYCGRG | 1 cut(s) | 1229 |
| AvaII | GGWCC | 2 cut(s) | 837, 1482 |
| AvrII | CCTAGG | 1 cut(s) | 1478 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1587, 1620 |
| BalI | TGGCCA | 1 cut(s) | 884 |
| BamHI | GGATCC | 1 cut(s) | 1513 |
| BauI | CACGAG | 1 cut(s) | 747 |
| BbsI | GAAGAC | 4 cut(s) | 926, 1340, 1627, 1863 |
| Bbv12I | GWGCWC | 1 cut(s) | 59 |
| BbvCI | CCTCAGC | 1 cut(s) | 707 |
| BbvI | GCAGC | 6 cut(s) | 61, 151, 385, 442, 955, 1944 |
| BccI | CCATC | 5 cut(s) | 26, 263, 341, 973, 1111 |
| BceAI | ACGGC | 1 cut(s) | 202 |
| BciT130I | CCWGG | 5 cut(s) | 1141, 1453, 1571, 1811, 1898 |
| BclI | TGATCA | 1 cut(s) | 1146 |
| BcnI | CCSGG | 3 cut(s) | 646, 1230, 1231 |
| BcoDI | GTCTC | 5 cut(s) | 165, 345, 1186, 1310, 1679 |
| BcuI | ACTAGT | 1 cut(s) | 1777 |
| BfaI | CTAG | 6 cut(s) | 759, 1262, 1479, 1592, 1778, 1938 |
| BfmI | CTRYAG | 3 cut(s) | 15, 438, 477 |
| BfuAI | ACCTGC | 1 cut(s) | 484 |
| BlnI | CCTAGG | 1 cut(s) | 1478 |
| BlpI | GCTNAGC | 3 cut(s) | 282, 321, 1556 |
| Bme1390I | CCNGG | 8 cut(s) | 646, 1141, 1230, 1231, 1453, 1571, 1811, 1898 |
| Bme18I | GGWCC | 2 cut(s) | 837, 1482 |
| BmeT110I | CYCGRG | 1 cut(s) | 1229 |
| BmgT120I | GGNCC | 5 cut(s) | 11, 837, 1482, 1807, 1813 |
| BmiI | GGNNCC | 8 cut(s) | 12, 37, 839, 1377, 1484, 1515, 1815, 1833 |
| BmrFI | CCNGG | 8 cut(s) | 646, 1141, 1230, 1231, 1453, 1571, 1811, 1898 |
| BmsI | GCATC | 4 cut(s) | 778, 1057, 1669, 1993 |
| BpiI | GAAGAC | 4 cut(s) | 926, 1340, 1627, 1863 |
| BpmI | CTGGAG | 3 cut(s) | 82, 273, 1553 |
| Bpu10I | CCTNAGC | 3 cut(s) | 154, 333, 707 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 282, 321, 1556 |
| BpuEI | CTTGAG | 4 cut(s) | 222, 599, 1037, 1753 |
| BpuMI | CCSGG | 3 cut(s) | 646, 1230, 1231 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1308 |
| BsaI | GGTCTC | 2 cut(s) | 345, 1679 |
| BsaWI | WCCGGW | 1 cut(s) | 295 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 20, 309, 335, 633, 1479, 1804 |
| Bse118I | RCCGGY | 2 cut(s) | 328, 901 |
| Bse1I | ACTGG | 3 cut(s) | 594, 853, 1348 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1308 |
| BseBI | CCWGG | 5 cut(s) | 1141, 1453, 1571, 1811, 1898 |
| BseGI | GGATG | 5 cut(s) | 274, 352, 1072, 1243, 1684 |
| BseJI | GATNNNNATC | 1 cut(s) | 1308 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 20, 309, 335, 633, 1479, 1804 |
| BseNI | ACTGG | 3 cut(s) | 594, 853, 1348 |
| BseRI | GAGGAG | 3 cut(s) | 969, 1368, 1383 |
| BseXI | GCAGC | 6 cut(s) | 61, 151, 385, 442, 955, 1944 |
| BseYI | CCCAGC | 1 cut(s) | 360 |
| BshFI | GGCC | 7 cut(s) | 13, 626, 763, 884, 1456, 1808, 1814 |
| BsiHKAI | GWGCWC | 1 cut(s) | 59 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1229 |
| BsiSI | CCGG | 8 cut(s) | 245, 296, 329, 500, 645, 902, 1230, 2007 |
| BslFI | GGGAC | 3 cut(s) | 1150, 1354, 1541 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 20, 309, 335, 633, 1479, 1804 |
| BsmAI | GTCTC | 5 cut(s) | 165, 345, 1186, 1310, 1679 |
| BsmBI | CGTCTC | 1 cut(s) | 165 |
| BsmFI | GGGAC | 3 cut(s) | 1150, 1354, 1541 |
| BsnI | GGCC | 7 cut(s) | 13, 626, 763, 884, 1456, 1808, 1814 |
| Bso31I | GGTCTC | 2 cut(s) | 345, 1679 |
| BsoBI | CYCGRG | 1 cut(s) | 1229 |
| Bsp1286I | GDGCHC | 1 cut(s) | 59 |
| Bsp1407I | TGTACA | 2 cut(s) | 964, 1603 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 282, 321, 1556 |
| BspANI | GGCC | 7 cut(s) | 13, 626, 763, 884, 1456, 1808, 1814 |
| BspLI | GGNNCC | 8 cut(s) | 12, 37, 839, 1377, 1484, 1515, 1815, 1833 |
| BspMAI | CTGCAG | 1 cut(s) | 481 |
| BspMI | ACCTGC | 1 cut(s) | 484 |
| BspPI | GGATC | 9 cut(s) | 1418, 1442, 1455, 1508, 1521, 1847, 1960, 2005, 2017 |
| BspQI | GCTCTTC | 1 cut(s) | 1721 |
| BspTNI | GGTCTC | 2 cut(s) | 345, 1679 |
| BsrFI | RCCGGY | 2 cut(s) | 328, 901 |
| BsrGI | TGTACA | 2 cut(s) | 964, 1603 |
| BsrI | ACTGG | 3 cut(s) | 594, 853, 1348 |
| BssAI | RCCGGY | 2 cut(s) | 328, 901 |
| BssNAI | GTATAC | 1 cut(s) | 975 |
| BssSI | CACGAG | 1 cut(s) | 747 |
| BssT1I | CCWWGG | 6 cut(s) | 66, 843, 885, 1478, 1503, 2015 |
| Bst1107I | GTATAC | 1 cut(s) | 975 |
| Bst2BI | CACGAG | 1 cut(s) | 747 |
| Bst2UI | CCWGG | 5 cut(s) | 1141, 1453, 1571, 1811, 1898 |
| Bst4CI | ACNGT | 2 cut(s) | 378, 1043 |
| Bst6I | CTCTTC | 3 cut(s) | 173, 827, 1721 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 556 |
| BstAUI | TGTACA | 2 cut(s) | 964, 1603 |
| BstC8I | GCNNGC | 4 cut(s) | 882, 1739, 1770, 1806 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1802 |
| BstF5I | GGATG | 5 cut(s) | 274, 352, 1072, 1243, 1684 |
| BstMAI | GTCTC | 5 cut(s) | 165, 345, 1186, 1310, 1679 |
| BstNI | CCWGG | 5 cut(s) | 1141, 1453, 1571, 1811, 1898 |
| BstNSI | RCATGY | 1 cut(s) | 665 |
| BstSCI | CCNGG | 8 cut(s) | 644, 1139, 1228, 1229, 1451, 1569, 1809, 1896 |
| BstSFI | CTRYAG | 3 cut(s) | 15, 438, 477 |
| BstV1I | GCAGC | 6 cut(s) | 61, 151, 385, 442, 955, 1944 |
| BstV2I | GAAGAC | 4 cut(s) | 926, 1340, 1627, 1863 |
| BstX2I | RGATCY | 7 cut(s) | 1410, 1460, 1513, 1852, 1952, 1997, 2009 |
| BstYI | RGATCY | 7 cut(s) | 1410, 1460, 1513, 1852, 1952, 1997, 2009 |
| BstZ17I | GTATAC | 1 cut(s) | 975 |
| BsuRI | GGCC | 7 cut(s) | 13, 626, 763, 884, 1456, 1808, 1814 |
| BtsCI | GGATG | 5 cut(s) | 274, 352, 1072, 1243, 1684 |
| BtsI | GCAGTG | 2 cut(s) | 453, 1948 |
| BtsIMutI | CAGTG | 2 cut(s) | 453, 1948 |
| BveI | ACCTGC | 1 cut(s) | 484 |
| Cac8I | GCNNGC | 4 cut(s) | 882, 1739, 1770, 1806 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1994 |
| Cfr10I | RCCGGY | 2 cut(s) | 328, 901 |
| Cfr13I | GGNCC | 5 cut(s) | 11, 837, 1482, 1807, 1813 |
| Cfr9I | CCCGGG | 1 cut(s) | 1229 |
| Csp6I | GTAC | 4 cut(s) | 965, 1128, 1159, 1604 |
| CviAII | CATG | 8 cut(s) | 662, 1213, 1244, 1249, 1465, 1531, 1643, 1765 |
| CviQI | GTAC | 4 cut(s) | 965, 1128, 1159, 1604 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 541 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 541 |
| EaeI | YGGCCR | 1 cut(s) | 882 |
| Eam1104I | CTCTTC | 3 cut(s) | 173, 827, 1721 |
| EarI | CTCTTC | 3 cut(s) | 173, 827, 1721 |
| EciI | GGCGGA | 1 cut(s) | 263 |
| Eco130I | CCWWGG | 6 cut(s) | 66, 843, 885, 1478, 1503, 2015 |
| Eco147I | AGGCCT | 1 cut(s) | 763 |
| Eco31I | GGTCTC | 2 cut(s) | 345, 1679 |
| Eco47I | GGWCC | 2 cut(s) | 837, 1482 |
| Eco57I | CTGAAG | 3 cut(s) | 717, 956, 1566 |
| Eco88I | CYCGRG | 1 cut(s) | 1229 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1802 |
| EcoO109I | RGGNCCY | 4 cut(s) | 11, 837, 1482, 1813 |
| EcoRI | GAATTC | 3 cut(s) | 313, 352, 1624 |
| EcoRII | CCWGG | 5 cut(s) | 1139, 1451, 1569, 1809, 1896 |
| EcoT14I | CCWWGG | 6 cut(s) | 66, 843, 885, 1478, 1503, 2015 |
| ErhI | CCWWGG | 6 cut(s) | 66, 843, 885, 1478, 1503, 2015 |
| Esp3I | CGTCTC | 1 cut(s) | 165 |
| FaeI | CATG | 8 cut(s) | 665, 1216, 1247, 1252, 1468, 1534, 1646, 1768 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1715, 1747, 1743, 1775 |
| FaqI | GGGAC | 3 cut(s) | 1150, 1354, 1541 |
| FatI | CATG | 8 cut(s) | 661, 1212, 1243, 1248, 1464, 1530, 1642, 1764 |
| FauI | CCCGC | 2 cut(s) | 381, 705 |
| FbaI | TGATCA | 1 cut(s) | 1146 |
| FblI | GTMKAC | 4 cut(s) | 72, 974, 1576, 1824 |
| FokI | GGATG | 5 cut(s) | 281, 359, 1079, 1250, 1691 |
| FspBI | CTAG | 6 cut(s) | 759, 1262, 1479, 1592, 1778, 1938 |
| GsaI | CCCAGC | 1 cut(s) | 364 |
| GsuI | CTGGAG | 3 cut(s) | 82, 273, 1553 |
| HaeIII | GGCC | 7 cut(s) | 13, 626, 763, 884, 1456, 1808, 1814 |
| HapII | CCGG | 8 cut(s) | 245, 296, 329, 500, 645, 902, 1230, 2007 |
| Hin1II | CATG | 8 cut(s) | 665, 1216, 1247, 1252, 1468, 1534, 1646, 1768 |
| HindIII | AAGCTT | 4 cut(s) | 84, 575, 1076, 1553 |
| HpaII | CCGG | 8 cut(s) | 245, 296, 329, 500, 645, 902, 1230, 2007 |
| HphI | GGTGA | 4 cut(s) | 41, 265, 419, 622 |
| Hpy166II | GTNNAC | 8 cut(s) | 73, 587, 718, 967, 975, 1577, 1663, 1825 |
| Hpy8I | GTNNAC | 8 cut(s) | 73, 587, 718, 967, 975, 1577, 1663, 1825 |
| Hpy99I | CGWCG | 1 cut(s) | 418 |
| HpyAV | CCTTC | 6 cut(s) | 20, 190, 564, 1401, 1590, 1808 |
| HpyCH4III | ACNGT | 2 cut(s) | 378, 1043 |
| HpyCH4V | TGCA | 5 cut(s) | 479, 769, 1087, 1181, 1768 |
| Hsp92II | CATG | 8 cut(s) | 665, 1216, 1247, 1252, 1468, 1534, 1646, 1768 |
| Ksp22I | TGATCA | 1 cut(s) | 1146 |
| LguI | GCTCTTC | 1 cut(s) | 1721 |
| LmnI | GCTCC | 6 cut(s) | 35, 247, 298, 1381, 1495, 1696 |
| Lsp1109I | GCAGC | 6 cut(s) | 61, 151, 385, 442, 955, 1944 |
| LweI | GCATC | 4 cut(s) | 778, 1057, 1669, 1993 |
| MaeI | CTAG | 6 cut(s) | 759, 1262, 1479, 1592, 1778, 1938 |
| MaeIII | GTNAC | 8 cut(s) | 182, 469, 653, 754, 911, 1711, 1780, 1964 |
| MflI | RGATCY | 7 cut(s) | 1410, 1460, 1513, 1852, 1952, 1997, 2009 |
| MhlI | GDGCHC | 1 cut(s) | 59 |
| MlsI | TGGCCA | 1 cut(s) | 884 |
| MluNI | TGGCCA | 1 cut(s) | 884 |
| MlyI | GAGTC | 6 cut(s) | 512, 1120, 1307, 1436, 1961, 1985 |
| MmeI | TCCRAC | 2 cut(s) | 486, 1376 |
| Mox20I | TGGCCA | 1 cut(s) | 884 |
| MscI | TGGCCA | 1 cut(s) | 884 |
| MseI | TTAA | 4 cut(s) | 522, 650, 684, 1053 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1443, 1647 |
| Msp20I | TGGCCA | 1 cut(s) | 884 |
| MspA1I | CMGCKG | 4 cut(s) | 52, 164, 775, 1631 |
| MspI | CCGG | 8 cut(s) | 245, 296, 329, 500, 645, 902, 1230, 2007 |
| MspR9I | CCNGG | 8 cut(s) | 646, 1141, 1230, 1231, 1453, 1571, 1811, 1898 |
| MvaI | CCWGG | 5 cut(s) | 1141, 1453, 1571, 1811, 1898 |
| NciI | CCSGG | 3 cut(s) | 646, 1230, 1231 |
| NlaIII | CATG | 8 cut(s) | 665, 1216, 1247, 1252, 1468, 1534, 1646, 1768 |
| NlaIV | GGNNCC | 8 cut(s) | 12, 37, 839, 1377, 1484, 1515, 1815, 1833 |
| NmeAIII | GCCGAG | 1 cut(s) | 542 |
| NmuCI | GTSAC | 2 cut(s) | 1780, 1964 |
| NspI | RCATGY | 1 cut(s) | 665 |
| PaqCI | CACCTGC | 1 cut(s) | 484 |
| PceI | AGGCCT | 1 cut(s) | 763 |
| PciSI | GCTCTTC | 1 cut(s) | 1721 |
| PfeI | GAWTC | 4 cut(s) | 106, 410, 931, 1946 |
| PleI | GAGTC | 6 cut(s) | 511, 1119, 1306, 1435, 1961, 1985 |
| PpsI | GAGTC | 6 cut(s) | 511, 1119, 1306, 1435, 1961, 1985 |
| PpuMI | RGGWCCY | 2 cut(s) | 837, 1482 |
| PsiI | TTATAA | 1 cut(s) | 1308 |
| Psp5II | RGGWCCY | 2 cut(s) | 837, 1482 |
| Psp6I | CCWGG | 5 cut(s) | 1139, 1451, 1569, 1809, 1896 |
| PspFI | CCCAGC | 1 cut(s) | 360 |
| PspGI | CCWGG | 5 cut(s) | 1139, 1451, 1569, 1809, 1896 |
| PspN4I | GGNNCC | 8 cut(s) | 12, 37, 839, 1377, 1484, 1515, 1815, 1833 |
| PspPI | GGNCC | 5 cut(s) | 11, 837, 1482, 1807, 1813 |
| PspPPI | RGGWCCY | 2 cut(s) | 837, 1482 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1815, 1847 |
| PstI | CTGCAG | 1 cut(s) | 481 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1994 |
| PsuI | RGATCY | 7 cut(s) | 1410, 1460, 1513, 1852, 1952, 1997, 2009 |
| PvuII | CAGCTG | 2 cut(s) | 775, 1631 |
| RsaI | GTAC | 4 cut(s) | 966, 1129, 1160, 1605 |
| RsaNI | GTAC | 4 cut(s) | 965, 1128, 1159, 1604 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1443, 1647 |
| SapI | GCTCTTC | 1 cut(s) | 1721 |
| SaqAI | TTAA | 4 cut(s) | 522, 650, 684, 1053 |
| Sau96I | GGNCC | 5 cut(s) | 11, 837, 1482, 1807, 1813 |
| SchI | GAGTC | 6 cut(s) | 512, 1120, 1307, 1436, 1961, 1985 |
| ScrFI | CCNGG | 8 cut(s) | 646, 1141, 1230, 1231, 1453, 1571, 1811, 1898 |
| SduI | GDGCHC | 1 cut(s) | 59 |
| SfaNI | GCATC | 4 cut(s) | 778, 1057, 1669, 1993 |
| SfcI | CTRYAG | 3 cut(s) | 15, 438, 477 |
| SinI | GGWCC | 2 cut(s) | 837, 1482 |
| SmaI | CCCGGG | 1 cut(s) | 1231 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1443, 1647 |
| SmlI | CTYRAG | 4 cut(s) | 237, 578, 1016, 1732 |
| SmoI | CTYRAG | 4 cut(s) | 237, 578, 1016, 1732 |
| SpeI | ACTAGT | 1 cut(s) | 1777 |
| SseBI | AGGCCT | 1 cut(s) | 763 |
| SspMI | CTAG | 6 cut(s) | 759, 1262, 1479, 1592, 1778, 1938 |
| StuI | AGGCCT | 1 cut(s) | 763 |
| StyD4I | CCNGG | 8 cut(s) | 644, 1139, 1228, 1229, 1451, 1569, 1809, 1896 |
| StyI | CCWWGG | 6 cut(s) | 66, 843, 885, 1478, 1503, 2015 |
| TaaI | ACNGT | 2 cut(s) | 378, 1043 |
| TaqI | TCGA | 7 cut(s) | 79, 416, 539, 545, 1275, 1919, 1961 |
| TatI | WGTACW | 2 cut(s) | 964, 1603 |
| TauI | GCSGC | 5 cut(s) | 161, 164, 367, 455, 461 |
| TfiI | GAWTC | 4 cut(s) | 106, 410, 931, 1946 |
| Tru1I | TTAA | 4 cut(s) | 522, 650, 684, 1053 |
| Tru9I | TTAA | 4 cut(s) | 522, 650, 684, 1053 |
| TscAI | CASTG | 2 cut(s) | 453, 1948 |
| TseFI | GTSAC | 2 cut(s) | 1780, 1964 |
| TseI | GCWGC | 6 cut(s) | 49, 164, 398, 455, 943, 1932 |
| Tsp45I | GTSAC | 2 cut(s) | 1780, 1964 |
| TspDTI | ATGAA | 6 cut(s) | 1043, 1071, 1232, 1665, 1874, 1974 |
| TspMI | CCCGGG | 1 cut(s) | 1229 |
| TspRI | CASTG | 2 cut(s) | 453, 1948 |
| VpaK11BI | GGWCC | 2 cut(s) | 837, 1482 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1802 |
| XapI | RAATTY | 4 cut(s) | 313, 352, 1175, 1624 |
| XceI | RCATGY | 1 cut(s) | 665 |
| XmaI | CCCGGG | 1 cut(s) | 1229 |
| XmaJI | CCTAGG | 1 cut(s) | 1478 |
| XmiI | GTMKAC | 4 cut(s) | 72, 974, 1576, 1824 |
| XspI | CTAG | 6 cut(s) | 759, 1262, 1479, 1592, 1778, 1938 |