Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0004180

Physical Location & Seq

Genomic Coordinates Forward (+)

50986164 .. 50992768

Gene Structure 6605 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG360600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2004 bp

ATGGCTTCGGGGCCTATAGTTGGAGAAGGTGATGGAACCAGAGAGAAGCAGAGGTACTCGGAAAGCAAGGTCTATACTCGAAAAGCTTTCAAAGGCCCCAAGAAAAACCTCAACAACGCCAAGACAAACTCTACCACCACAACCGCCTTAGCCGCCCCGACCTCCACCGCCACCGCTGCCAACCACGAAAAGAGTAACGGCGAGAAGAAGGACGAGGACAACAGGAATAACAAGAATGACAATTCGACTCAAGCTCCAGCTGAGGTGATTGGTTTGGAGGATGGGAATTCAGCTCAGCCGCCAGCTCCGGCGTCCGAGGATGGGAATTCAGCTCAGCCGCCAGCTCAGGCGTCCGAGGATGGGAATTCTACTCAGCCGCTGCAACAGCCACAGTCGATTTCGCGGGTGGAGGCAGCCTCTGACGATTCCTCGAGCCTGAACCGGCAAGAGCCTGCTGCTGCGGTGGTGGCACCGGCCACTCAGGATACACCTGCAGAGAATGGGGTTTCCAAACCGGAGTCGGACAGCCGAGTTAAGATCAATTTGGCTTCAAGGTCGAAGCAAGAGGTGCGTGAGCTTAGAAGGAAGCTTGAGAGTGAACTGGATATGGTTCGAGGTTTGGTGAAGAAGATTGAGACCAAGCAGGGGCAGATTGGTGGGTTAAGTTACCCCCATGTTTCTGCAAATGATGGGGTTAATAATAATGTCATGTTGAGGCGGGTTCACTCGGAGGTTGCTTCCGGTGGTATTCCTCGTGAGGCTACTAGGCCTTTGCATCAGCTGAGTATATCAGTATTGGAGAATAGTCAGGGAGGGATTGATAACGTGGAGAAAGAGAAGAGAACCCCCAAGGCAAACCAGTTCTACCAAAGTTCTGAGTTTTTGCTGGCCAAGGATAAGTTTCCACCTGCTGAAAGTAACAAGAAGACGAAATTGAATCTGAAGAAGCAGCAAAGTGGAGGAGAGTTGGGGCACAGGTATTCAATGGGCACCAAGTTTTTCAAGAGTTGTAGTTCTTTGCTTGAGAAATTGATGAAACACAAGCATAGTTGGGTGTTTAATGAACCTGTGGATGCCGAAAAGCTTGGTTTGCATGATTATCACATCATTATCAAGAGTCCAATGGACTTGGGTACAATCAAATCCAGGCTGATCAAGAATTGGTACAAGTCTCCCAAAGAATTTGCAGAAGATGTGAGACTTACATTTGACAATGCCATGACCTATAATCCGCCCGGGCAGGATGTTCATGTCATGGCAGAACAGCTAGCCAAGATTTTCGAGGAAAGGTGGGCTATAATAGAGTCAGATTATAATCGTGAGATAAGGTTCGGCTATGATTATGGGACTGGTCTCCCTACACAACCAATACCAAGAAAGGCTCCTCCACCACCACCTGCTCTTGATATGCGAAGGGTCTTGGATAGGTCTGAGTCCATATCACATCATGGTGATCCCAGGCCAAAACCCATGACTATTACTCCTAGGACCCCTGCTCCGAAGAAGCCTAAGGCGAAAGATCCTCATAAAAGGGACATGACTTATGAAGAGAAACAAAAGCTTAGCACAAGCCTCCAGGGTCTACCTTCAGAGAAGCTAGATACCATTGTACAGATTATTAGGAAAAGGAATTCAGCCGTCTTCCAGCATGATGATGAAATTGAAGTGGACATTGATAGCGTGGATGCTGAGACCCTTTGGGAGCTTGATAGGTATGTAACCAACTATAAGAAGAGTTTGAGCAAACACAAGCGAAAAGCTGAACTTGCTATGCAAGCCAGAACAGAAACTGAGCAGAATGTCCTGCCGCAGGCCCAGGCCCCCAGTGTGGATGAGGTTCCGAAAGAAACCACAACAGATCCAAAGATAGTTTCATCTTCAACACCTATTCAAAGGGATAACCAGGGTGATAATAGGAGTAGGTCGAGTAGTTCAAGCAGCTCTAGCAGTGATTCTGGATCTTCCTCGAGTGGTACTATGATACATCTCTGTTTGCAAATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0007275 GO:0007346 GO:0008150 GO:0009292 GO:0009294 GO:0009987 GO:0022622 GO:0032501 GO:0032502 GO:0044764 GO:0045787 GO:0045931 GO:0048364 GO:0048518 GO:0048522 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051704 GO:0051726 GO:0065007 GO:0099402

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BET Bromodomain

Protein Analysis

667

Amino Acids

73.78

Weight (kDa)

8.8

Isoelectric Point (pI)

53.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Bromodomain	PF00439	337 - 421	6.7e-20	Bromodomain
BET	PF17035	513 - 574	2.6e-22	Bromodomain extra-terminal - transcription regulation

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004180)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06230 AT1G06230 AT1G06230 AT1G06230
fragaria_vesca	FvH4_6g27070 FvH4_6g27070 FvH4_6g27070 FvH4_6g27070 FvH4_6g27070
malus_domestica	MD09G1240500.v1.1 MD17G1233300.v1.1
prunus_persica	Prupe.3G124500_v2.0.a1 Prupe.3G124500_v2.0.a1 Prupe.3G124500_v2.0.a1 Prupe.3G124500_v2.0.a1 Prupe.3G124500_v2.0.a1 Prupe.3G124500_v2.0.a1 Prupe.3G124500_v2.0.a1 Prupe.3G124500_v2.0.a1 Prupe.3G124500_v2.0.a1 Prupe.3G124500_v2.0.a1
pyrus_communis	pycom09g15900 pycom17g23630
rosa_chinensis	RchiOBHm_Chr2g0129031
rosa_laevigata	RLG00000019045
rosa_multiflora	Rmu_sc0009747.1_g000004
rosa_rugosa	Rorug02G0283500 Rorug02G0283500
rosa_samantha	Rh2AG336000 Rh2BG344000 Rh2CG322900 Rh2DG360600
rosa_wichuraiana	Rw2G027240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1314
AarI	CACCTGC	3 cut(s)	499, 916, 1405
Acc36I	ACCTGC	3 cut(s)	499, 916, 1405
AccB1I	GGYRCC	2 cut(s)	469, 989
AccI	GTMKAC	1 cut(s)	1582
AccII	CGCG	1 cut(s)	403
AclWI	GGATC	4 cut(s)	1448, 1514, 1853, 1966
AcoI	YGGCCR	2 cut(s)	474, 888
AcsI	RAATTY	5 cut(s)	286, 325, 364, 1181, 1630
AcuI	CTGAAG	2 cut(s)	962, 1572
AcyI	GRCGYC	2 cut(s)	311, 350
AfaI	GTAC	5 cut(s)	56, 1135, 1166, 1611, 1975
AfiI	CCNNNNNNNGG	6 cut(s)	20, 321, 360, 645, 1810, 1828
AgsI	TTSAA	9 cut(s)	91, 552, 937, 984, 1003, 1664, 1881, 1892, 1935
AjnI	CCWGG	5 cut(s)	1145, 1457, 1575, 1815, 1902
AjuI	GAANNNNNNNTTGG	2 cut(s)	1855, 1887
Alw26I	GTCTC	5 cut(s)	629, 1176, 1192, 1358, 1685
AlwI	GGATC	4 cut(s)	1448, 1514, 1853, 1966
AlwNI	CAGNNNCTG	3 cut(s)	379, 419, 1790
Ama87I	CYCGRG	3 cut(s)	430, 1235, 1966
AoxI	GGCC	8 cut(s)	11, 94, 474, 767, 888, 1460, 1812, 1818
ApeKI	GCWGC	7 cut(s)	176, 379, 413, 455, 458, 949, 1938
ApoI	RAATTY	5 cut(s)	286, 325, 364, 1181, 1630
AspA2I	CCTAGG	1 cut(s)	1484
AspS9I	GGNCC	5 cut(s)	11, 95, 1488, 1813, 1819
AsuC2I	CCSGG	2 cut(s)	1236, 1237
AsuHPI	GGTGA	5 cut(s)	41, 277, 634, 1463, 1919
AsuNHI	GCTAGC	1 cut(s)	1267
AvaI	CYCGRG	3 cut(s)	430, 1235, 1966
AvaII	GGWCC	1 cut(s)	1488
AvrII	CCTAGG	1 cut(s)	1484
AxyI	CCTNAGG	1 cut(s)	1509
BaeGI	GKGCMC	2 cut(s)	975, 992
BaeI	ACNNNNGTAYC	2 cut(s)	1593, 1626
BalI	TGGCCA	1 cut(s)	890
BanI	GGYRCC	2 cut(s)	469, 989
BarI	GAAGNNNNNNTAC	2 cut(s)	38, 70
BauI	CACGAG	1 cut(s)	753
BbsI	GAAGAC	2 cut(s)	932, 1633
BbvCI	CCTCAGC	1 cut(s)	261
BbvI	GCAGC	7 cut(s)	163, 366, 425, 442, 445, 961, 1950
BccI	CCATC	5 cut(s)	26, 275, 314, 353, 683
BceAI	ACGGC	2 cut(s)	214, 1622
BciT130I	CCWGG	5 cut(s)	1147, 1459, 1577, 1817, 1904
BciVI	GTATCC	1 cut(s)	478
BclI	TGATCA	1 cut(s)	1152
BcnI	CCSGG	2 cut(s)	1236, 1237
BcoDI	GTCTC	5 cut(s)	629, 1176, 1192, 1358, 1685
BfaI	CTAG	5 cut(s)	765, 1268, 1485, 1598, 1944
BfmI	CTRYAG	2 cut(s)	15, 492
BfuAI	ACCTGC	3 cut(s)	499, 916, 1405
BfuI	GTATCC	1 cut(s)	478
BlnI	CCTAGG	1 cut(s)	1484
BlpI	GCTNAGC	3 cut(s)	294, 333, 1562
Bme1390I	CCNGG	7 cut(s)	1147, 1236, 1237, 1459, 1577, 1817, 1904
Bme18I	GGWCC	1 cut(s)	1488
BmeT110I	CYCGRG	3 cut(s)	430, 1235, 1966
BmgT120I	GGNCC	5 cut(s)	11, 95, 1488, 1813, 1819
BmiI	GGNNCC	9 cut(s)	12, 37, 97, 471, 991, 1383, 1490, 1821, 1839
BmrFI	CCNGG	7 cut(s)	1147, 1236, 1237, 1459, 1577, 1817, 1904
BmrI	ACTGGG	1 cut(s)	1818
BmsI	GCATC	3 cut(s)	784, 1063, 1675
BmtI	GCTAGC	1 cut(s)	1271
BmuI	ACTGGG	1 cut(s)	1818
BpiI	GAAGAC	2 cut(s)	932, 1633
BplI	GAGNNNNNCTC	2 cut(s)	401, 433
BpmI	CTGGAG	2 cut(s)	240, 1559
Bpu10I	CCTNAGC	3 cut(s)	148, 261, 345
Bpu1102I	GCTNAGC	3 cut(s)	294, 333, 1562
BpuEI	CTTGAG	3 cut(s)	234, 611, 1043
BpuMI	CCSGG	2 cut(s)	1236, 1237
BsaBI	GATNNNNATC	1 cut(s)	1314
BsaHI	GRCGYC	2 cut(s)	311, 350
BsaI	GGTCTC	3 cut(s)	629, 1358, 1685
BsaWI	WCCGGW	2 cut(s)	514, 740
BsaXI	ACNNNNNCTCC	6 cut(s)	238, 268, 1465, 1480, 1495, 1510
Bsc4I	CCNNNNNNNGG	6 cut(s)	20, 321, 360, 645, 1810, 1828
Bse118I	RCCGGY	2 cut(s)	441, 472
Bse1I	ACTGG	4 cut(s)	606, 859, 1354, 1824
Bse21I	CCTNAGG	1 cut(s)	1509
Bse8I	GATNNNNATC	1 cut(s)	1314
BseBI	CCWGG	5 cut(s)	1147, 1459, 1577, 1817, 1904
BseGI	GGATG	7 cut(s)	286, 325, 364, 1078, 1249, 1690, 1837
BseJI	GATNNNNATC	1 cut(s)	1314
BseLI	CCNNNNNNNGG	6 cut(s)	20, 321, 360, 645, 1810, 1828
BseNI	ACTGG	4 cut(s)	606, 859, 1354, 1824
BseRI	GAGGAG	2 cut(s)	975, 1374
BseSI	GKGCMC	2 cut(s)	975, 992
BseXI	GCAGC	7 cut(s)	163, 366, 425, 442, 445, 961, 1950
Bsh1236I	CGCG	1 cut(s)	403
BshFI	GGCC	8 cut(s)	13, 96, 476, 769, 890, 1462, 1814, 1820
BshNI	GGYRCC	2 cut(s)	469, 989
BsiHKCI	CYCGRG	3 cut(s)	430, 1235, 1966
BsiSI	CCGG	6 cut(s)	308, 442, 473, 515, 741, 1236
BslFI	GGGAC	2 cut(s)	1360, 1547
BslI	CCNNNNNNNGG	6 cut(s)	20, 321, 360, 645, 1810, 1828
BsmAI	GTCTC	5 cut(s)	629, 1176, 1192, 1358, 1685
BsmFI	GGGAC	2 cut(s)	1360, 1547
BsnI	GGCC	8 cut(s)	13, 96, 476, 769, 890, 1462, 1814, 1820
Bso31I	GGTCTC	3 cut(s)	629, 1358, 1685
BsoBI	CYCGRG	3 cut(s)	430, 1235, 1966
Bsp1286I	GDGCHC	2 cut(s)	975, 992
Bsp1407I	TGTACA	1 cut(s)	1609
Bsp143I	GATC	6 cut(s)	537, 1152, 1453, 1519, 1858, 1958
Bsp1720I	GCTNAGC	3 cut(s)	294, 333, 1562
BspANI	GGCC	8 cut(s)	13, 96, 476, 769, 890, 1462, 1814, 1820
BspFNI	CGCG	1 cut(s)	403
BspLI	GGNNCC	9 cut(s)	12, 37, 97, 471, 991, 1383, 1490, 1821, 1839
BspMAI	CTGCAG	1 cut(s)	496
BspMI	ACCTGC	3 cut(s)	499, 916, 1405
BspOI	GCTAGC	1 cut(s)	1271
BspPI	GGATC	4 cut(s)	1448, 1514, 1853, 1966
BspT107I	GGYRCC	2 cut(s)	469, 989
BspTNI	GGTCTC	3 cut(s)	629, 1358, 1685
BsrFI	RCCGGY	2 cut(s)	441, 472
BsrGI	TGTACA	1 cut(s)	1609
BsrI	ACTGG	4 cut(s)	606, 859, 1354, 1824
BssAI	RCCGGY	2 cut(s)	441, 472
BssMI	GATC	6 cut(s)	537, 1152, 1453, 1519, 1858, 1958
BssNI	GRCGYC	2 cut(s)	311, 350
BssSI	CACGAG	1 cut(s)	753
BssT1I	CCWWGG	3 cut(s)	849, 891, 1484
Bst2BI	CACGAG	1 cut(s)	753
Bst2UI	CCWGG	5 cut(s)	1147, 1459, 1577, 1817, 1904
Bst4CI	ACNGT	1 cut(s)	393
Bst6I	CTCTTC	3 cut(s)	833, 1542, 1727
BstACI	GRCGYC	2 cut(s)	311, 350
BstAPI	GCANNNNNTGC	1 cut(s)	568
BstAUI	TGTACA	1 cut(s)	1609
BstC8I	GCNNGC	7 cut(s)	303, 342, 453, 888, 1269, 1776, 1812
BstENI	CCTNNNNNAGG	1 cut(s)	1808
BstF5I	GGATG	7 cut(s)	286, 325, 364, 1078, 1249, 1690, 1837
BstFNI	CGCG	1 cut(s)	403
BstKTI	GATC	6 cut(s)	540, 1155, 1456, 1522, 1861, 1961
BstMAI	GTCTC	5 cut(s)	629, 1176, 1192, 1358, 1685
BstMBI	GATC	6 cut(s)	537, 1152, 1453, 1519, 1858, 1958
BstMWI	GCNNNNNNNGC	9 cut(s)	152, 176, 385, 467, 568, 1090, 1766, 1775, 1944
BstNI	CCWGG	5 cut(s)	1147, 1459, 1577, 1817, 1904
BstSCI	CCNGG	7 cut(s)	1145, 1234, 1235, 1457, 1575, 1815, 1902
BstSFI	CTRYAG	2 cut(s)	15, 492
BstSLI	GKGCMC	2 cut(s)	975, 992
BstUI	CGCG	1 cut(s)	403
BstV1I	GCAGC	7 cut(s)	163, 366, 425, 442, 445, 961, 1950
BstV2I	GAAGAC	2 cut(s)	932, 1633
BstX2I	RGATCY	3 cut(s)	1519, 1858, 1958
BstYI	RGATCY	3 cut(s)	1519, 1858, 1958
Bsu36I	CCTNAGG	1 cut(s)	1509
BsuI	GTATCC	1 cut(s)	478
BsuRI	GGCC	8 cut(s)	13, 96, 476, 769, 890, 1462, 1814, 1820
BtsCI	GGATG	7 cut(s)	286, 325, 364, 1078, 1249, 1690, 1837
BtsI	GCAGTG	1 cut(s)	1954
BtsIMutI	CAGTG	2 cut(s)	1831, 1954
BveI	ACCTGC	3 cut(s)	499, 916, 1405
Cac8I	GCNNGC	7 cut(s)	303, 342, 453, 888, 1269, 1776, 1812
CaiI	CAGNNNCTG	3 cut(s)	379, 419, 1790
Cfr10I	RCCGGY	2 cut(s)	441, 472
Cfr13I	GGNCC	5 cut(s)	11, 95, 1488, 1813, 1819
Cfr9I	CCCGGG	1 cut(s)	1235
CseI	GACGC	2 cut(s)	300, 339
Csp6I	GTAC	5 cut(s)	55, 1134, 1165, 1610, 1974
CviQI	GTAC	5 cut(s)	55, 1134, 1165, 1610, 1974
DpnI	GATC	6 cut(s)	539, 1154, 1455, 1521, 1860, 1960
DpnII	GATC	6 cut(s)	537, 1152, 1453, 1519, 1858, 1958
EaeI	YGGCCR	2 cut(s)	474, 888
Eam1104I	CTCTTC	3 cut(s)	833, 1542, 1727
EarI	CTCTTC	3 cut(s)	833, 1542, 1727
EciI	GGCGGA	1 cut(s)	1221
Eco130I	CCWWGG	3 cut(s)	849, 891, 1484
Eco147I	AGGCCT	1 cut(s)	769
Eco31I	GGTCTC	3 cut(s)	629, 1358, 1685
Eco47I	GGWCC	1 cut(s)	1488
Eco57I	CTGAAG	2 cut(s)	962, 1572
Eco81I	CCTNAGG	1 cut(s)	1509
Eco88I	CYCGRG	3 cut(s)	430, 1235, 1966
EcoNI	CCTNNNNNAGG	1 cut(s)	1808
EcoO109I	RGGNCCY	4 cut(s)	11, 95, 1488, 1819
EcoRI	GAATTC	4 cut(s)	286, 325, 364, 1630
EcoRII	CCWGG	5 cut(s)	1145, 1457, 1575, 1815, 1902
EcoT14I	CCWWGG	3 cut(s)	849, 891, 1484
ErhI	CCWWGG	3 cut(s)	849, 891, 1484
FalI	AAGNNNNNCTT	2 cut(s)	1749, 1781
FaqI	GGGAC	2 cut(s)	1360, 1547
FauI	CCCGC	2 cut(s)	396, 711
FbaI	TGATCA	1 cut(s)	1152
FblI	GTMKAC	1 cut(s)	1582
FokI	GGATG	7 cut(s)	293, 332, 371, 1085, 1256, 1697, 1844
FspBI	CTAG	5 cut(s)	765, 1268, 1485, 1598, 1944
GsuI	CTGGAG	2 cut(s)	240, 1559
HaeIII	GGCC	8 cut(s)	13, 96, 476, 769, 890, 1462, 1814, 1820
HapII	CCGG	6 cut(s)	308, 442, 473, 515, 741, 1236
HgaI	GACGC	2 cut(s)	300, 339
Hin1I	GRCGYC	2 cut(s)	311, 350
HindIII	AAGCTT	4 cut(s)	84, 587, 1082, 1559
HinfI	GANTC	8 cut(s)	247, 425, 518, 937, 1117, 1304, 1433, 1952
HpaII	CCGG	6 cut(s)	308, 442, 473, 515, 741, 1236
HphI	GGTGA	5 cut(s)	41, 277, 634, 1463, 1919
Hpy166II	GTNNAC	4 cut(s)	599, 724, 1583, 1669
Hpy188III	TCNNGA	8 cut(s)	482, 755, 1003, 1114, 1156, 1319, 1403, 1956
Hpy8I	GTNNAC	4 cut(s)	599, 724, 1583, 1669
HpyAV	CCTTC	5 cut(s)	20, 202, 576, 1407, 1596
HpyCH4III	ACNGT	1 cut(s)	393
HpyCH4IV	ACGT	1 cut(s)	825
HpyCH4V	TGCA	8 cut(s)	382, 494, 683, 775, 1093, 1187, 1774, 1996
HpyF10VI	GCNNNNNNNGC	9 cut(s)	152, 176, 385, 467, 568, 1090, 1766, 1775, 1944
HpySE526I	ACGT	1 cut(s)	825
Hsp92I	GRCGYC	2 cut(s)	311, 350
Ksp22I	TGATCA	1 cut(s)	1152
Kzo9I	GATC	6 cut(s)	537, 1152, 1453, 1519, 1858, 1958
LmnI	GCTCC	5 cut(s)	259, 310, 1387, 1501, 1702
Lsp1109I	GCAGC	7 cut(s)	163, 366, 425, 442, 445, 961, 1950
LweI	GCATC	3 cut(s)	784, 1063, 1675
MaeI	CTAG	5 cut(s)	765, 1268, 1485, 1598, 1944
MaeII	ACGT	1 cut(s)	825
MaeIII	GTNAC	4 cut(s)	194, 665, 917, 1717
MalI	GATC	6 cut(s)	539, 1154, 1455, 1521, 1860, 1960
MboI	GATC	6 cut(s)	537, 1152, 1453, 1519, 1858, 1958
MflI	RGATCY	3 cut(s)	1519, 1858, 1958
MhlI	GDGCHC	2 cut(s)	975, 992
MlsI	TGGCCA	1 cut(s)	890
MluNI	TGGCCA	1 cut(s)	890
MlyI	GAGTC	5 cut(s)	241, 527, 1126, 1313, 1442
MmeI	TCCRAC	1 cut(s)	501
Mox20I	TGGCCA	1 cut(s)	890
MscI	TGGCCA	1 cut(s)	890
MseI	TTAA	4 cut(s)	534, 662, 696, 1059
MslI	CAYNNNNRTG	2 cut(s)	1449, 1653
Msp20I	TGGCCA	1 cut(s)	890
MspA1I	CMGCKG	4 cut(s)	176, 260, 379, 781
MspI	CCGG	6 cut(s)	308, 442, 473, 515, 741, 1236
MspR9I	CCNGG	7 cut(s)	1147, 1236, 1237, 1459, 1577, 1817, 1904
MvaI	CCWGG	5 cut(s)	1147, 1459, 1577, 1817, 1904
MvnI	CGCG	1 cut(s)	403
MwoI	GCNNNNNNNGC	9 cut(s)	152, 176, 385, 467, 568, 1090, 1766, 1775, 1944
NciI	CCSGG	2 cut(s)	1236, 1237
NdeII	GATC	6 cut(s)	537, 1152, 1453, 1519, 1858, 1958
NheI	GCTAGC	1 cut(s)	1267
NlaIV	GGNNCC	9 cut(s)	12, 37, 97, 471, 991, 1383, 1490, 1821, 1839
NmeAIII	GCCGAG	1 cut(s)	554
PaeR7I	CTCGAG	2 cut(s)	430, 1966
PaqCI	CACCTGC	3 cut(s)	499, 916, 1405
PceI	AGGCCT	1 cut(s)	769
PfeI	GAWTC	3 cut(s)	425, 937, 1952
PleI	GAGTC	5 cut(s)	241, 526, 1125, 1312, 1441
PpsI	GAGTC	5 cut(s)	241, 526, 1125, 1312, 1441
PpuMI	RGGWCCY	1 cut(s)	1488
PsiI	TTATAA	1 cut(s)	1314
Psp5II	RGGWCCY	1 cut(s)	1488
Psp6I	CCWGG	5 cut(s)	1145, 1457, 1575, 1815, 1902
PspGI	CCWGG	5 cut(s)	1145, 1457, 1575, 1815, 1902
PspN4I	GGNNCC	9 cut(s)	12, 37, 97, 471, 991, 1383, 1490, 1821, 1839
PspPI	GGNCC	5 cut(s)	11, 95, 1488, 1813, 1819
PspPPI	RGGWCCY	1 cut(s)	1488
PspXI	VCTCGAGB	2 cut(s)	430, 1966
PstI	CTGCAG	1 cut(s)	496
PstNI	CAGNNNCTG	3 cut(s)	379, 419, 1790
PsuI	RGATCY	3 cut(s)	1519, 1858, 1958
PvuII	CAGCTG	2 cut(s)	260, 781
RsaI	GTAC	5 cut(s)	56, 1135, 1166, 1611, 1975
RsaNI	GTAC	5 cut(s)	55, 1134, 1165, 1610, 1974
RseI	CAYNNNNRTG	2 cut(s)	1449, 1653
SaqAI	TTAA	4 cut(s)	534, 662, 696, 1059
Sau3AI	GATC	6 cut(s)	537, 1152, 1453, 1519, 1858, 1958
Sau96I	GGNCC	5 cut(s)	11, 95, 1488, 1813, 1819
SchI	GAGTC	5 cut(s)	241, 527, 1126, 1313, 1442
ScrFI	CCNGG	7 cut(s)	1147, 1236, 1237, 1459, 1577, 1817, 1904
SduI	GDGCHC	2 cut(s)	975, 992
SfaNI	GCATC	3 cut(s)	784, 1063, 1675
SfcI	CTRYAG	2 cut(s)	15, 492
Sfr274I	CTCGAG	2 cut(s)	430, 1966
SinI	GGWCC	1 cut(s)	1488
SlaI	CTCGAG	2 cut(s)	430, 1966
SmaI	CCCGGG	1 cut(s)	1237
SmiMI	CAYNNNNRTG	2 cut(s)	1449, 1653
SmlI	CTYRAG	5 cut(s)	249, 430, 590, 1022, 1966
SmoI	CTYRAG	5 cut(s)	249, 430, 590, 1022, 1966
SrfI	GCCCGGGC	1 cut(s)	1237
SseBI	AGGCCT	1 cut(s)	769
SspMI	CTAG	5 cut(s)	765, 1268, 1485, 1598, 1944
StuI	AGGCCT	1 cut(s)	769
StyD4I	CCNGG	7 cut(s)	1145, 1234, 1235, 1457, 1575, 1815, 1902
StyI	CCWWGG	3 cut(s)	849, 891, 1484
TaaI	ACNGT	1 cut(s)	393
TaiI	ACGT	1 cut(s)	828
TaqI	TCGA	9 cut(s)	79, 245, 395, 431, 557, 613, 1281, 1925, 1967
TatI	WGTACW	1 cut(s)	1609
TauI	GCSGC	5 cut(s)	155, 301, 340, 379, 1810
TfiI	GAWTC	3 cut(s)	425, 937, 1952
Tru1I	TTAA	4 cut(s)	534, 662, 696, 1059
Tru9I	TTAA	4 cut(s)	534, 662, 696, 1059
TscAI	CASTG	2 cut(s)	1831, 1954
TseI	GCWGC	7 cut(s)	176, 379, 413, 455, 458, 949, 1938
TspDTI	ATGAA	6 cut(s)	1049, 1077, 1238, 1560, 1671, 1863
TspMI	CCCGGG	1 cut(s)	1235
TspRI	CASTG	2 cut(s)	1831, 1954
VpaK11BI	GGWCC	1 cut(s)	1488
XagI	CCTNNNNNAGG	1 cut(s)	1808
XapI	RAATTY	5 cut(s)	286, 325, 364, 1181, 1630
XhoI	CTCGAG	2 cut(s)	430, 1966
XmaI	CCCGGG	1 cut(s)	1235
XmaJI	CCTAGG	1 cut(s)	1484
XmiI	GTMKAC	1 cut(s)	1582
XspI	CTAG	5 cut(s)	765, 1268, 1485, 1598, 1944

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.