FvH4_6g28260

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0015663
Physical Location & Seq
Forward (+)
21743591 .. 21747632
4042 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g28260.t2

Sequence Viewer

Length: 1539 bp
ATGGTTCAGCTCATGGCTCCGAGGAAGAAGGTGACGGTGAAGTTCGACGTCGACGACGAGTCGTTCCATGACTCCGAAATCGCTCCGCTTCAAAAACGGCCCAAACTCGACTCCTCGTCTCTGGAGCAGTGGGGTTCAGGAGGTGCCACGTGTGCGGTTGCGCCGCTGGGATATGATCCGCTGGAGGAGCCGAGCCCGCTGGGGTTGCAGCTGAGGAAGAGTCCGTCGCTTTTGGATTTGATACAGATGAGGCTAACACAGCAGAAGGCTGTTAAATTGGGCAAGAAAAATCACAAGGGAGCTGCTGGTTCTGGTGCTACTGATAAACTCAAGGCCATGAACTTTCCGGCTTCGCTGCTAAGGATTGGGACTTGGGAGTATAAGTCTAAACACGAAGGGGATTTGGTGGCGAAATGTTACTTCGCAAAGCATAAGCTTGTGTGGGAGGTTCTTGATGGTAGTCTCAAGAACAAGATGGAAATTCAGTGGTCAGATGTTGTGGCTATCAAGGCCAACTACCCTGATGATGGACCGGCCACTTTGGATGTCGTGCTTGCTAGGCCGCCTCTTTTCTTTAGGGAGACGAATCCACAACCTAGAAAGCATACCTTGTGGCAGGCAACAACAGATTTTACTGATGGGCAAGCTAGCATAAACAGGCGACACTTCCTCCAGTGTCCACATGGCTTGCTTTTTGGCAAGCATTTTGAAAAGCTTATTCAATGTGACCCTCGTCTCAACTTTTTGAGCCAACAGCCAGAGATTGTGTTAGAATCTCCGTTCTTTGAAACCAGAGTTCCAGGAACAAGTGACACTGATGAATATAGACATCAGATTTGTTCTAAGCATGAAGATGGACCCATATTTGGGTTGCAGGGTTCTGCATCACCTTCTGGAACTCATTCGTCCTCATCTAGAAATGAAGAATTTGCTGGTAGAGCTCCTGAAAATTATCCCCGGGAAATTTCTTCGTCTATCTCAGTAATGGACACCACTGTGATGGCACAGAAGGGGAACCTTGGAGCCGGAATCTCAAAGATACCAAGCAACTTTGATCAAATCAAAGTTCCTGGACTTCGCTCGTCAATGTCAGTGAGCGACTTTGTAAACCACATTGGACACTGCATCACGGAAAAGATGTCTGGCACTCCCGTGTTTGCTGGAAAGGAGCAACCTAGCAGCAACATTCTAGAGGAGATTACTCAATACTTGTTCAATGACTCCCAACTCACTTTACCATCTGATGAGCAGTCCCTCATGTCAAGGGTCAACTCCCTTTGTTGCCTTCTGCAGAAGGATCCTACTGCACAAAACTTGCATGCTAGGAGGGATGATGGGAGAATGGCTGAAACCAACTCCGCTTCCGCATCAGGTTACCAGAGTAAGATTGGAGAAGGGTTTGTTACACCCAAGGTCGAGAGCACTGACGCTTCGGATGATACACAACTAGGAATCCCAAGGCGGGATTCATTTGGGGAGTTTCTTCTTAATATGCCTAGGATAGCATCTCTTCCCCAGTTTCTTTTTAATTTTTCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

513

Amino Acids

56.64

Weight (kDa)

6.41

Isoelectric Point (pI)

49.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PH_TRF2_HOY1 PF24818 32 - 149 1.7e-59 TRF2/HOY1 PH-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015663)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g28260 FvH4_6g28260
malus_domestica MD09G1227700.v1.1 MD17G1226500.v1.1
prunus_persica Prupe.3G103700_v2.0.a1
pyrus_communis pycom09g14710 pycom17g22990
rosa_chinensis RchiOBHm_Chr2g0132301
rosa_laevigata RLG00000019244
rosa_roxburghii Rroxscaffold_2G00112180
rosa_rugosa Rorug02G0303500
rosa_samantha Rh2AG356500 Rh2BG363000 Rh2CG340000 Rh2DG379800
rosa_wichuraiana Rw2G028990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 51
AccB1I GGYRCC 1 cut(s) 143
AccI GTMKAC 1 cut(s) 51
AciI CCGC 9 cut(s) 86, 155, 164, 179, 197, 563, 1359, 1365, 1462
AclWI GGATC 3 cut(s) 170, 1292, 1305
AcoI YGGCCR 1 cut(s) 534
AcsI RAATTY 3 cut(s) 480, 926, 963
AcvI CACGTG 1 cut(s) 150
AcyI GRCGYC 1 cut(s) 48
AfiI CCNNNNNNNGG 4 cut(s) 527, 866, 867, 1462
AflIII ACRYGT 1 cut(s) 149
AgsI TTSAA 5 cut(s) 92, 710, 722, 788, 1216
AhdI GACNNNNNGTC 2 cut(s) 58, 115
AjnI CCWGG 2 cut(s) 799, 1069
AjuI GAANNNNNNNTTGG 2 cut(s) 1450, 1482
AleI CACNNNNGTG 2 cut(s) 995, 1151
AluBI AGCT 7 cut(s) 10, 211, 302, 436, 647, 715, 941
AluI AGCT 7 cut(s) 10, 211, 302, 436, 647, 715, 941
Alw21I GWGCWC 2 cut(s) 943, 1424
Alw26I GTCTC 4 cut(s) 123, 467, 575, 740
AlwI GGATC 3 cut(s) 170, 1292, 1305
Ama87I CYCGRG 1 cut(s) 957
AoxI GGCC 5 cut(s) 98, 333, 510, 534, 560
ApeKI GCWGC 4 cut(s) 208, 302, 355, 1179
ApoI RAATTY 3 cut(s) 480, 926, 963
ArsI GACNNNNNNTTYG 2 cut(s) 819, 851
Asp700I GAANNNNTTC 1 cut(s) 901
AspA2I CCTAGG 1 cut(s) 1496
AspLEI GCGC 1 cut(s) 163
AspS9I GGNCC 3 cut(s) 99, 530, 857
AsuC2I CCSGG 2 cut(s) 958, 959
AsuHPI GGTGA 3 cut(s) 43, 49, 879
AsuNHI GCTAGC 1 cut(s) 647
AvaI CYCGRG 1 cut(s) 957
AvaII GGWCC 2 cut(s) 530, 857
AvrII CCTAGG 1 cut(s) 1496
BamHI GGATCC 1 cut(s) 1297
BanI GGYRCC 1 cut(s) 143
BanII GRGCYC 2 cut(s) 197, 943
BbrPI CACGTG 1 cut(s) 150
Bbv12I GWGCWC 2 cut(s) 943, 1424
BbvCI CCTCAGC 1 cut(s) 212
BbvI GCAGC 4 cut(s) 220, 289, 342, 1191
BccI CCATC 8 cut(s) 449, 469, 521, 632, 848, 994, 1246, 1328
BceAI ACGGC 1 cut(s) 113
BciT130I CCWGG 2 cut(s) 801, 1071
BclI TGATCA 1 cut(s) 1054
BcnI CCSGG 2 cut(s) 958, 959
BcoDI GTCTC 4 cut(s) 123, 467, 575, 740
BfaI CTAG 9 cut(s) 558, 597, 648, 915, 1176, 1190, 1323, 1448, 1497
BfmI CTRYAG 1 cut(s) 1289
BisI GCNGC 6 cut(s) 164, 209, 303, 356, 563, 1180
BlnI CCTAGG 1 cut(s) 1496
BlsI GCNGC 6 cut(s) 165, 210, 304, 357, 564, 1181
Bme1390I CCNGG 4 cut(s) 801, 958, 959, 1071
Bme18I GGWCC 2 cut(s) 530, 857
BmeRI GACNNNNNGTC 2 cut(s) 58, 115
BmeT110I CYCGRG 1 cut(s) 957
BmgT120I GGNCC 3 cut(s) 99, 530, 857
BmiI GGNNCC 7 cut(s) 18, 145, 189, 859, 1016, 1024, 1299
BmrFI CCNGG 4 cut(s) 801, 958, 959, 1071
BmrI ACTGGG 1 cut(s) 1510
BmsI GCATC 4 cut(s) 893, 1134, 1376, 1514
BmtI GCTAGC 1 cut(s) 651
BmuI ACTGGG 1 cut(s) 1510
BoxI GACNNNNGTC 1 cut(s) 732
BpmI CTGGAG 3 cut(s) 143, 203, 656
Bpu10I CCTNAGC 2 cut(s) 212, 359
BpuEI CTTGAG 2 cut(s) 314, 449
BpuMI CCSGG 2 cut(s) 958, 959
BsaAI YACGTR 1 cut(s) 150
BsaHI GRCGYC 1 cut(s) 48
BsaJI CCNNGG 7 cut(s) 20, 956, 957, 1018, 1410, 1457, 1496
BsaXI ACNNNNNCTCC 4 cut(s) 368, 398, 654, 684
Bsc4I CCNNNNNNNGG 4 cut(s) 527, 866, 867, 1462
Bse118I RCCGGY 1 cut(s) 532
Bse1I ACTGG 2 cut(s) 673, 1516
BseBI CCWGG 2 cut(s) 801, 1071
BseDI CCNNGG 7 cut(s) 20, 956, 957, 1018, 1410, 1457, 1496
BseGI GGATG 3 cut(s) 550, 1336, 1441
BseLI CCNNNNNNNGG 4 cut(s) 527, 866, 867, 1462
BseMII CTCAG 2 cut(s) 203, 993
BseNI ACTGG 2 cut(s) 673, 1516
BseRI GAGGAG 3 cut(s) 103, 200, 1208
BseXI GCAGC 4 cut(s) 220, 289, 342, 1191
BseYI CCCAGC 2 cut(s) 166, 199
BsgI GTGCAG 1 cut(s) 1290
BshFI GGCC 5 cut(s) 100, 335, 512, 536, 562
BshNI GGYRCC 1 cut(s) 143
BsiHKAI GWGCWC 2 cut(s) 943, 1424
BsiHKCI CYCGRG 1 cut(s) 957
BsiSI CCGG 4 cut(s) 347, 533, 958, 1026
BslFI GGGAC 2 cut(s) 382, 1237
BslI CCNNNNNNNGG 4 cut(s) 527, 866, 867, 1462
BsmAI GTCTC 4 cut(s) 123, 467, 575, 740
BsmBI CGTCTC 3 cut(s) 123, 575, 740
BsmFI GGGAC 2 cut(s) 382, 1237
BsnI GGCC 5 cut(s) 100, 335, 512, 536, 562
BsoBI CYCGRG 1 cut(s) 957
Bsp1286I GDGCHC 3 cut(s) 197, 943, 1424
Bsp143I GATC 3 cut(s) 175, 1054, 1297
BspACI CCGC 9 cut(s) 86, 155, 164, 179, 197, 563, 1359, 1365, 1462
BspANI GGCC 5 cut(s) 100, 335, 512, 536, 562
BspCNI CTCAG 2 cut(s) 204, 992
BspLI GGNNCC 7 cut(s) 18, 145, 189, 859, 1016, 1024, 1299
BspMAI CTGCAG 1 cut(s) 1293
BspOI GCTAGC 1 cut(s) 651
BspPI GGATC 3 cut(s) 170, 1292, 1305
BspT107I GGYRCC 1 cut(s) 143
BsrFI RCCGGY 1 cut(s) 532
BsrI ACTGG 2 cut(s) 673, 1516
BssAI RCCGGY 1 cut(s) 532
BssECI CCNNGG 7 cut(s) 20, 956, 957, 1018, 1410, 1457, 1496
BssMI GATC 3 cut(s) 175, 1054, 1297
BssNI GRCGYC 1 cut(s) 48
BssT1I CCWWGG 4 cut(s) 1018, 1410, 1457, 1496
Bst2UI CCWGG 2 cut(s) 801, 1071
Bst4CI ACNGT 2 cut(s) 37, 997
Bst6I CTCTTC 2 cut(s) 212, 1515
BstACI GRCGYC 1 cut(s) 48
BstBAI YACGTR 1 cut(s) 150
BstC8I GCNNGC 8 cut(s) 197, 555, 618, 645, 649, 689, 701, 1320
BstDEI CTNAG 4 cut(s) 212, 359, 843, 979
BstEII GGTNACC 1 cut(s) 1373
BstF5I GGATG 3 cut(s) 550, 1336, 1441
BstHHI GCGC 1 cut(s) 163
BstKTI GATC 3 cut(s) 178, 1057, 1300
BstMAI GTCTC 4 cut(s) 123, 467, 575, 740
BstMBI GATC 3 cut(s) 175, 1054, 1297
BstMWI GCNNNNNNNGC 8 cut(s) 152, 187, 196, 205, 259, 509, 559, 938
BstNI CCWGG 2 cut(s) 801, 1071
BstNSI RCATGY 1 cut(s) 1322
BstPAI GACNNNNGTC 1 cut(s) 732
BstPI GGTNACC 1 cut(s) 1373
BstSCI CCNGG 4 cut(s) 799, 956, 957, 1069
BstSFI CTRYAG 1 cut(s) 1289
BstV1I GCAGC 4 cut(s) 220, 289, 342, 1191
BstX2I RGATCY 1 cut(s) 1297
BstXI CCANNNNNNTGG 1 cut(s) 1000
BstYI RGATCY 1 cut(s) 1297
BsuRI GGCC 5 cut(s) 100, 335, 512, 536, 562
BtsCI GGATG 3 cut(s) 550, 1336, 1441
BtsI GCAGTG 2 cut(s) 134, 1120
BtsIMutI CAGTG 8 cut(s) 134, 491, 680, 813, 993, 1098, 1120, 1422
Cac8I GCNNGC 8 cut(s) 197, 555, 618, 645, 649, 689, 701, 1320
CfoI GCGC 1 cut(s) 163
Cfr10I RCCGGY 1 cut(s) 532
Cfr13I GGNCC 3 cut(s) 99, 530, 857
Cfr9I CCCGGG 1 cut(s) 957
CseI GACGC 1 cut(s) 1436
CspCI CAANNNNNGTGG 2 cut(s) 669, 704
CviAII CATG 7 cut(s) 13, 68, 337, 683, 848, 1258, 1319
DdeI CTNAG 4 cut(s) 212, 359, 843, 979
DpnI GATC 3 cut(s) 177, 1056, 1299
DpnII GATC 3 cut(s) 175, 1054, 1297
DriI GACNNNNNGTC 2 cut(s) 58, 115
EaeI YGGCCR 1 cut(s) 534
Eam1104I CTCTTC 2 cut(s) 212, 1515
Eam1105I GACNNNNNGTC 2 cut(s) 58, 115
EarI CTCTTC 2 cut(s) 212, 1515
Ecl136II GAGCTC 1 cut(s) 941
Eco130I CCWWGG 4 cut(s) 1018, 1410, 1457, 1496
Eco24I GRGCYC 2 cut(s) 197, 943
Eco47I GGWCC 2 cut(s) 530, 857
Eco53kI GAGCTC 1 cut(s) 941
Eco72I CACGTG 1 cut(s) 150
Eco88I CYCGRG 1 cut(s) 957
Eco91I GGTNACC 1 cut(s) 1373
EcoICRI GAGCTC 1 cut(s) 941
EcoO65I GGTNACC 1 cut(s) 1373
EcoRII CCWGG 2 cut(s) 799, 1069
EcoT14I CCWWGG 4 cut(s) 1018, 1410, 1457, 1496
EcoT38I GRGCYC 2 cut(s) 197, 943
ErhI CCWWGG 4 cut(s) 1018, 1410, 1457, 1496
Esp3I CGTCTC 3 cut(s) 123, 575, 740
FaeI CATG 7 cut(s) 16, 71, 340, 686, 851, 1261, 1322
FalI AAGNNNNNCTT 2 cut(s) 593, 625
FaqI GGGAC 2 cut(s) 382, 1237
FatI CATG 7 cut(s) 12, 67, 336, 682, 847, 1257, 1318
FauI CCCGC 2 cut(s) 204, 1455
FbaI TGATCA 1 cut(s) 1054
FblI GTMKAC 1 cut(s) 51
Fnu4HI GCNGC 6 cut(s) 164, 209, 303, 356, 563, 1180
FokI GGATG 3 cut(s) 557, 1343, 1448
FriOI GRGCYC 2 cut(s) 197, 943
Fsp4HI GCNGC 6 cut(s) 164, 209, 303, 356, 563, 1180
FspBI CTAG 9 cut(s) 558, 597, 648, 915, 1176, 1190, 1323, 1448, 1497
GlaI GCGC 1 cut(s) 162
GluI GCNGC 6 cut(s) 164, 209, 303, 356, 563, 1180
GsaI CCCAGC 2 cut(s) 170, 203
GsuI CTGGAG 3 cut(s) 143, 203, 656
HaeIII GGCC 5 cut(s) 100, 335, 512, 536, 562
HapII CCGG 4 cut(s) 347, 533, 958, 1026
HgaI GACGC 1 cut(s) 1436
HhaI GCGC 1 cut(s) 163
Hin1I GRCGYC 1 cut(s) 48
Hin1II CATG 7 cut(s) 16, 71, 340, 686, 851, 1261, 1322
Hin6I GCGC 1 cut(s) 161
HinP1I GCGC 1 cut(s) 161
HincII GTYRAC 2 cut(s) 52, 1270
HindII GTYRAC 2 cut(s) 52, 1270
HindIII AAGCTT 2 cut(s) 434, 713
HpaII CCGG 4 cut(s) 347, 533, 958, 1026
HphI GGTGA 3 cut(s) 43, 49, 879
Hpy166II GTNNAC 4 cut(s) 52, 680, 1108, 1270
Hpy188I TCNGA 6 cut(s) 21, 76, 493, 834, 1243, 1435
Hpy8I GTNNAC 4 cut(s) 52, 680, 1108, 1270
Hpy99I CGWCG 5 cut(s) 50, 53, 56, 59, 229
HpyAV CCTTC 8 cut(s) 22, 259, 389, 900, 1003, 1288, 1295, 1388
HpyCH4III ACNGT 2 cut(s) 37, 997
HpyCH4IV ACGT 2 cut(s) 48, 149
HpyCH4V TGCA 7 cut(s) 208, 874, 884, 1125, 1291, 1307, 1318
HpyF10VI GCNNNNNNNGC 8 cut(s) 152, 187, 196, 205, 259, 509, 559, 938
HpyF3I CTNAG 4 cut(s) 212, 359, 843, 979
HpySE526I ACGT 2 cut(s) 48, 149
Hsp92I GRCGYC 1 cut(s) 48
Hsp92II CATG 7 cut(s) 16, 71, 340, 686, 851, 1261, 1322
HspAI GCGC 1 cut(s) 161
Ksp22I TGATCA 1 cut(s) 1054
Kzo9I GATC 3 cut(s) 175, 1054, 1297
LmnI GCTCC 8 cut(s) 22, 88, 124, 187, 299, 946, 1022, 1168
Lsp1109I GCAGC 4 cut(s) 220, 289, 342, 1191
LweI GCATC 4 cut(s) 893, 1134, 1376, 1514
MaeI CTAG 9 cut(s) 558, 597, 648, 915, 1176, 1190, 1323, 1448, 1497
MaeII ACGT 2 cut(s) 48, 149
MaeIII GTNAC 6 cut(s) 31, 416, 725, 809, 1373, 1402
MalI GATC 3 cut(s) 177, 1056, 1299
MboI GATC 3 cut(s) 175, 1054, 1297
MboII GAAGA 7 cut(s) 37, 229, 863, 935, 960, 1475, 1502
MflI RGATCY 1 cut(s) 1297
MhlI GDGCHC 3 cut(s) 197, 943, 1424
MluCI AATT 6 cut(s) 275, 480, 926, 949, 963, 1528
MlyI GAGTC 5 cut(s) 65, 68, 104, 229, 1214
MroXI GAANNNNTTC 1 cut(s) 901
MseI TTAA 3 cut(s) 273, 1488, 1527
MslI CAYNNNNRTG 4 cut(s) 852, 995, 998, 1151
MspA1I CMGCKG 4 cut(s) 166, 181, 199, 211
MspI CCGG 4 cut(s) 347, 533, 958, 1026
MspR9I CCNGG 4 cut(s) 801, 958, 959, 1071
MvaI CCWGG 2 cut(s) 801, 1071
MwoI GCNNNNNNNGC 8 cut(s) 152, 187, 196, 205, 259, 509, 559, 938
NciI CCSGG 2 cut(s) 958, 959
NdeII GATC 3 cut(s) 175, 1054, 1297
NheI GCTAGC 1 cut(s) 647
NlaIII CATG 7 cut(s) 16, 71, 340, 686, 851, 1261, 1322
NlaIV GGNNCC 7 cut(s) 18, 145, 189, 859, 1016, 1024, 1299
NmeAIII GCCGAG 1 cut(s) 216
NmuCI GTSAC 3 cut(s) 31, 725, 809
NspI RCATGY 1 cut(s) 1322
OliI CACNNNNGTG 2 cut(s) 995, 1151
PaeI GCATGC 1 cut(s) 1322
PcsI WCGNNNNNNNCGW 2 cut(s) 51, 54
PdmI GAANNNNTTC 1 cut(s) 901
PfeI GAWTC 5 cut(s) 586, 773, 1029, 1452, 1466
PfoI TCCNGGA 2 cut(s) 799, 1069
PkrI GCNGC 6 cut(s) 165, 210, 304, 357, 564, 1181
PleI GAGTC 5 cut(s) 65, 67, 104, 228, 1214
PmaCI CACGTG 1 cut(s) 150
PmlI CACGTG 1 cut(s) 150
PpsI GAGTC 5 cut(s) 65, 67, 104, 228, 1214
Ppu21I YACGTR 1 cut(s) 150
PshAI GACNNNNGTC 1 cut(s) 732
Psp124BI GAGCTC 1 cut(s) 943
Psp6I CCWGG 2 cut(s) 799, 1069
PspCI CACGTG 1 cut(s) 150
PspEI GGTNACC 1 cut(s) 1373
PspFI CCCAGC 2 cut(s) 166, 199
PspGI CCWGG 2 cut(s) 799, 1069
PspN4I GGNNCC 7 cut(s) 18, 145, 189, 859, 1016, 1024, 1299
PspPI GGNCC 3 cut(s) 99, 530, 857
PstI CTGCAG 1 cut(s) 1293
PsuI RGATCY 1 cut(s) 1297
PvuII CAGCTG 1 cut(s) 211
RseI CAYNNNNRTG 4 cut(s) 852, 995, 998, 1151
SacI GAGCTC 1 cut(s) 943
SalI GTCGAC 1 cut(s) 50
SaqAI TTAA 3 cut(s) 273, 1488, 1527
SatI GCNGC 6 cut(s) 164, 209, 303, 356, 563, 1180
Sau3AI GATC 3 cut(s) 175, 1054, 1297
Sau96I GGNCC 3 cut(s) 99, 530, 857
SchI GAGTC 5 cut(s) 65, 68, 104, 229, 1214
ScrFI CCNGG 4 cut(s) 801, 958, 959, 1071
SduI GDGCHC 3 cut(s) 197, 943, 1424
SfaNI GCATC 4 cut(s) 893, 1134, 1376, 1514
SfcI CTRYAG 1 cut(s) 1289
SgrDI CGTCGACG 1 cut(s) 50
SinI GGWCC 2 cut(s) 530, 857
SmaI CCCGGG 1 cut(s) 959
SmiMI CAYNNNNRTG 4 cut(s) 852, 995, 998, 1151
SmlI CTYRAG 2 cut(s) 329, 464
SmoI CTYRAG 2 cut(s) 329, 464
SphI GCATGC 1 cut(s) 1322
Sse9I AATT 6 cut(s) 275, 480, 926, 949, 963, 1528
SsiI CCGC 9 cut(s) 86, 155, 164, 179, 197, 563, 1359, 1365, 1462
SspMI CTAG 9 cut(s) 558, 597, 648, 915, 1176, 1190, 1323, 1448, 1497
SstI GAGCTC 1 cut(s) 943
StyD4I CCNGG 4 cut(s) 799, 956, 957, 1069
StyI CCWWGG 4 cut(s) 1018, 1410, 1457, 1496
TaaI ACNGT 2 cut(s) 37, 997
TaiI ACGT 2 cut(s) 51, 152
TaqI TCGA 4 cut(s) 45, 51, 108, 1416
TasI AATT 6 cut(s) 275, 480, 926, 949, 963, 1528
TauI GCSGC 2 cut(s) 166, 565
TfiI GAWTC 5 cut(s) 586, 773, 1029, 1452, 1466
Tru1I TTAA 3 cut(s) 273, 1488, 1527
Tru9I TTAA 3 cut(s) 273, 1488, 1527
TscAI CASTG 8 cut(s) 134, 491, 680, 820, 1000, 1098, 1127, 1429
TseFI GTSAC 3 cut(s) 31, 725, 809
TseI GCWGC 4 cut(s) 208, 302, 355, 1179
Tsp45I GTSAC 3 cut(s) 31, 725, 809
TspDTI ATGAA 5 cut(s) 353, 834, 864, 936, 1458
TspGWI ACGGA 3 cut(s) 213, 768, 1145
TspMI CCCGGG 1 cut(s) 957
TspRI CASTG 8 cut(s) 134, 491, 680, 820, 1000, 1098, 1127, 1429
VpaK11BI GGWCC 2 cut(s) 530, 857
XapI RAATTY 3 cut(s) 480, 926, 963
XbaI TCTAGA 2 cut(s) 914, 1189
XceI RCATGY 1 cut(s) 1322
XcmI CCANNNNNNNNNTGG 2 cut(s) 680, 1385
XmaI CCCGGG 1 cut(s) 957
XmaJI CCTAGG 1 cut(s) 1496
XmiI GTMKAC 1 cut(s) 51
XmnI GAANNNNTTC 1 cut(s) 901
XspI CTAG 9 cut(s) 558, 597, 648, 915, 1176, 1190, 1323, 1448, 1497
ZraI GACGTC 1 cut(s) 49
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.