Rroxscaffold_2G00112180

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0015663
Physical Location & Seq
Reverse (-)
37159098 .. 37162583
3486 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00112180.1

Sequence Viewer

Length: 1566 bp
ATGGTTCAGCTCATGACTCCGAGAAAGGTGACGGTGAAGTCCGACGTCGACGAGTCGTCGGAAGACTCCCGGCTCGCTCCGGTTCACAAACGGCCCAAACTCGACTCCTTGTCTCCGCTGGAGCAGCAGTGGGGTTCAGGAGGAGGAGGAGGGGCCACGTGTGCGGTGTCGCAGTTGGCGTATGATCCTCTGGAGGAGCCGAGCCCGCTGGGCTTGCAGCTGAGGAAGAGTCCGTCGCTATTGGATTTGATCCAGATGAAGCTGACGCAGCCAAAGGCTGTGAAATTGGCCAACAAGAAGAATCATAGGGGAGCTGCTGCTACTGCTGCTTCTGGTGGTGGTACGGATAAGCTCAAGGCTATGAACTTTCCGGCTTCGCTTCTGAGGATTGGGACTTGGGAGTATAAGTCGAAACATGAAGGGGATTTAGTGGCGAAGTGTTACTTTGCAAAGCATAAGCTTGTGTGGGAGGTGCTTGATGGTAGTCTCAAGAACAAGATGGAAATACAGTGGTCTGATGTTGTGGCTATCAAGGCTAACTACCCGGATGAAGGAGAGGCGACGTTGGATGTAGTGCTTGCTAGACCGCCTCTTTTCTTTAGGGAGACGAATCCGCAACCTAGGAAACATACCTTGTGGCAGGCTACAACAGATTTTACTGGCGGGCAAGCCAGCATAAACAGGCGACACTTTCTGCAGTGCCCACATGGCTTGCTTTTTGGCAAGCATTTTGAAAAGCTTATTCAATGTGATCCTCGTCTCAACTTTTTGAGTCAACAGCCAGAGATTGTGTTAGAATCTCCGTTCTTTGAAGCCAGAGTTTCAGGAACAAGTGACGCTGATGAATATAGACATCAGTTTAGTTCTAAGCTTGAAGATAGACCTATATTTGGGTTGCAGGGTTCTGCATCACCTTCTGGAACTCATTCGTCCTCATCTAGAAATGAAGATTTTGCTGGCAGAGCTCCTGAAAATTACTCCCGCGAAATTTCTTCGTCTAGCTCAGTAATGGACACCCCTGCAGTTGCAGAGAAGGGGAACTTTGGAGCTGGAATCTCAAAGATGCCAAGCAAATTTGATCAAATCAAAGTTCCTGGACTTCGCTCGTCAATGTCAGTGAGCGACTTTGTAAGCCATATTGGTCATTGCATCACGGAAAAGATGTCCAGCACTCCCATGTATGCGGGCAAGGAGCAGCCTAGCAGTGACATTTTAGAGGAGATTACTCAATACTTGTTTAATGACTCGCAACTCGGCTTACCATCTGACGAGCAGTCCCTCATGTCAAGGGTCAACTCCCTTTGTTGCCTTCTGCAGAAGGATCCTACTACTGTACAAAACTTGCATGCCAGAAGTGATGATGGGAGAATGGGCGAAACCAACTCTGCTTCCGCATCAGGCTATCAGAGTAAGATTGGAGAAGGGTTTGCCACACCCAAGATTGAGGTCACTGATATTTCAGACGACAAGCAACCAGGAATCCCGAGACGGGATTCATTTGGGAAGCTTCTTCTTAATATTCCTAGGATAGCATCTCTTCCCCAGTTTCTTTTTAATTTTTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

521

Amino Acids

57.22

Weight (kDa)

6.9

Isoelectric Point (pI)

53.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PH_TRF2_HOY1 PF24818 122 - 239 5.6e-59 TRF2/HOY1 PH-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015663)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g28260 FvH4_6g28260
malus_domestica MD09G1227700.v1.1 MD17G1226500.v1.1
prunus_persica Prupe.3G103700_v2.0.a1
pyrus_communis pycom09g14710 pycom17g22990
rosa_chinensis RchiOBHm_Chr2g0132301
rosa_laevigata RLG00000019244
rosa_roxburghii Rroxscaffold_2G00112180
rosa_rugosa Rorug02G0303500
rosa_samantha Rh2AG356500 Rh2BG363000 Rh2CG340000 Rh2DG379800
rosa_wichuraiana Rw2G028990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 37
AatII GACGTC 1 cut(s) 48
AccI GTMKAC 1 cut(s) 48
AccII CGCG 1 cut(s) 984
AciI CCGC 9 cut(s) 116, 164, 206, 587, 614, 663, 982, 1184, 1392
AclWI GGATC 5 cut(s) 179, 244, 746, 1316, 1329
AcoI YGGCCR 1 cut(s) 288
AcsI RAATTY 2 cut(s) 987, 1073
AcvI CACGTG 1 cut(s) 159
AcyI GRCGYC 1 cut(s) 45
AfaI GTAC 2 cut(s) 343, 1335
AfiI CCNNNNNNNGG 3 cut(s) 551, 890, 1489
AflIII ACRYGT 1 cut(s) 158
AgsI TTSAA 4 cut(s) 734, 746, 812, 875
AhdI GACNNNNNGTC 3 cut(s) 55, 109, 1273
AjnI CCWGG 2 cut(s) 1093, 1474
Alw21I GWGCWC 1 cut(s) 967
Alw26I GTCTC 5 cut(s) 117, 491, 599, 764, 1480
AlwI GGATC 5 cut(s) 179, 244, 746, 1316, 1329
Ama87I CYCGRG 1 cut(s) 1483
AoxI GGCC 3 cut(s) 92, 153, 288
ApeKI GCWGC 7 cut(s) 124, 217, 268, 314, 317, 326, 1195
ApoI RAATTY 2 cut(s) 987, 1073
Asp700I GAANNNNTTC 1 cut(s) 925
AspA2I CCTAGG 2 cut(s) 620, 1523
AspS9I GGNCC 2 cut(s) 93, 153
AsuC2I CCSGG 2 cut(s) 70, 545
AsuHPI GGTGA 3 cut(s) 40, 46, 903
AvaI CYCGRG 1 cut(s) 1483
AvrII CCTAGG 2 cut(s) 620, 1523
BaeGI GKGCMC 1 cut(s) 704
BalI TGGCCA 1 cut(s) 290
BamHI GGATCC 1 cut(s) 1321
BanII GRGCYC 2 cut(s) 206, 967
BbrPI CACGTG 1 cut(s) 159
BbsI GAAGAC 1 cut(s) 69
Bbv12I GWGCWC 1 cut(s) 967
BbvCI CCTCAGC 1 cut(s) 221
BbvI GCAGC 7 cut(s) 136, 229, 280, 301, 304, 313, 1207
BccI CCATC 4 cut(s) 473, 493, 1270, 1355
BceAI ACGGC 1 cut(s) 107
BciT130I CCWGG 2 cut(s) 1095, 1476
BclI TGATCA 1 cut(s) 1078
BcnI CCSGG 2 cut(s) 70, 545
BcoDI GTCTC 5 cut(s) 117, 491, 599, 764, 1480
BfaI CTAG 6 cut(s) 582, 621, 939, 999, 1200, 1524
BfmI CTRYAG 3 cut(s) 695, 1020, 1313
BglI GCCNNNNNGGC 2 cut(s) 210, 708
BisI GCNGC 7 cut(s) 125, 218, 269, 315, 318, 327, 1196
BlnI CCTAGG 2 cut(s) 620, 1523
BlsI GCNGC 7 cut(s) 126, 219, 270, 316, 319, 328, 1197
Bme1390I CCNGG 4 cut(s) 70, 545, 1095, 1476
BmeRI GACNNNNNGTC 3 cut(s) 55, 109, 1273
BmeT110I CYCGRG 1 cut(s) 1483
BmgT120I GGNCC 2 cut(s) 93, 153
BmiI GGNNCC 3 cut(s) 154, 198, 1323
BmrFI CCNGG 4 cut(s) 70, 545, 1095, 1476
BmrI ACTGGG 1 cut(s) 1537
BmsI GCATC 5 cut(s) 917, 1053, 1158, 1403, 1541
BmuI ACTGGG 1 cut(s) 1537
BpiI GAAGAC 1 cut(s) 69
BpmI CTGGAG 2 cut(s) 140, 212
Bpu10I CCTNAGC 1 cut(s) 221
BpuEI CTTGAG 2 cut(s) 338, 473
BpuMI CCSGG 2 cut(s) 70, 545
BsaAI YACGTR 1 cut(s) 159
BsaHI GRCGYC 1 cut(s) 45
BsaJI CCNNGG 2 cut(s) 620, 1523
BsaWI WCCGGW 1 cut(s) 79
BsaXI ACNNNNNCTCC 4 cut(s) 113, 143, 392, 422
Bsc4I CCNNNNNNNGG 3 cut(s) 551, 890, 1489
Bse1I ACTGG 2 cut(s) 664, 1543
Bse3DI GCAATG 1 cut(s) 1144
BseBI CCWGG 2 cut(s) 1095, 1476
BseDI CCNNGG 2 cut(s) 620, 1523
BseGI GGATG 2 cut(s) 553, 574
BseLI CCNNNNNNNGG 3 cut(s) 551, 890, 1489
BseMI GCAATG 1 cut(s) 1144
BseMII CTCAG 3 cut(s) 212, 374, 1017
BseNI ACTGG 2 cut(s) 664, 1543
BseRI GAGGAG 5 cut(s) 156, 159, 162, 209, 1232
BseSI GKGCMC 1 cut(s) 704
BseXI GCAGC 7 cut(s) 136, 229, 280, 301, 304, 313, 1207
BseYI CCCAGC 1 cut(s) 208
Bsh1236I CGCG 1 cut(s) 984
BshFI GGCC 3 cut(s) 94, 155, 290
BsiHKAI GWGCWC 1 cut(s) 967
BsiHKCI CYCGRG 1 cut(s) 1483
BsiSI CCGG 4 cut(s) 70, 80, 371, 545
BslFI GGGAC 2 cut(s) 406, 1261
BslI CCNNNNNNNGG 3 cut(s) 551, 890, 1489
BsmAI GTCTC 5 cut(s) 117, 491, 599, 764, 1480
BsmBI CGTCTC 3 cut(s) 599, 764, 1480
BsmFI GGGAC 2 cut(s) 406, 1261
BsnI GGCC 3 cut(s) 94, 155, 290
BsoBI CYCGRG 1 cut(s) 1483
Bsp1286I GDGCHC 3 cut(s) 206, 704, 967
Bsp1407I TGTACA 1 cut(s) 1333
Bsp143I GATC 5 cut(s) 184, 249, 751, 1078, 1321
BspACI CCGC 9 cut(s) 116, 164, 206, 587, 614, 663, 982, 1184, 1392
BspANI GGCC 3 cut(s) 94, 155, 290
BspCNI CTCAG 3 cut(s) 213, 375, 1016
BspFNI CGCG 1 cut(s) 984
BspHI TCATGA 1 cut(s) 12
BspLI GGNNCC 3 cut(s) 154, 198, 1323
BspMAI CTGCAG 3 cut(s) 699, 1024, 1317
BspPI GGATC 5 cut(s) 179, 244, 746, 1316, 1329
BsrDI GCAATG 1 cut(s) 1144
BsrGI TGTACA 1 cut(s) 1333
BsrI ACTGG 2 cut(s) 664, 1543
BssECI CCNNGG 2 cut(s) 620, 1523
BssMI GATC 5 cut(s) 184, 249, 751, 1078, 1321
BssNI GRCGYC 1 cut(s) 45
BssT1I CCWWGG 2 cut(s) 620, 1523
Bst2UI CCWGG 2 cut(s) 1095, 1476
Bst4CI ACNGT 3 cut(s) 34, 510, 1333
Bst6I CTCTTC 2 cut(s) 221, 1542
BstACI GRCGYC 1 cut(s) 45
BstAUI TGTACA 1 cut(s) 1333
BstBAI YACGTR 1 cut(s) 159
BstDEI CTNAG 4 cut(s) 221, 383, 867, 1003
BstF5I GGATG 2 cut(s) 553, 574
BstFNI CGCG 1 cut(s) 984
BstKTI GATC 5 cut(s) 187, 252, 754, 1081, 1324
BstMAI GTCTC 5 cut(s) 117, 491, 599, 764, 1480
BstMBI GATC 5 cut(s) 184, 249, 751, 1078, 1321
BstNI CCWGG 2 cut(s) 1095, 1476
BstNSI RCATGY 1 cut(s) 1349
BstSCI CCNGG 4 cut(s) 68, 543, 1093, 1474
BstSFI CTRYAG 3 cut(s) 695, 1020, 1313
BstSLI GKGCMC 1 cut(s) 704
BstUI CGCG 1 cut(s) 984
BstV1I GCAGC 7 cut(s) 136, 229, 280, 301, 304, 313, 1207
BstV2I GAAGAC 1 cut(s) 69
BstX2I RGATCY 1 cut(s) 1321
BstYI RGATCY 1 cut(s) 1321
BsuRI GGCC 3 cut(s) 94, 155, 290
BtsCI GGATG 2 cut(s) 553, 574
BtsI GCAGTG 3 cut(s) 134, 704, 1210
BtsIMutI CAGTG 6 cut(s) 134, 515, 704, 1122, 1210, 1449
CciI TCATGA 1 cut(s) 12
Cfr13I GGNCC 2 cut(s) 93, 153
CseI GACGC 2 cut(s) 274, 845
Csp6I GTAC 2 cut(s) 342, 1334
CspCI CAANNNNNGTGG 2 cut(s) 693, 728
CviAII CATG 6 cut(s) 13, 416, 707, 1177, 1282, 1346
CviQI GTAC 2 cut(s) 342, 1334
DdeI CTNAG 4 cut(s) 221, 383, 867, 1003
DpnI GATC 5 cut(s) 186, 251, 753, 1080, 1323
DpnII GATC 5 cut(s) 184, 249, 751, 1078, 1321
DrdI GACNNNNNNGTC 1 cut(s) 37
DriI GACNNNNNGTC 3 cut(s) 55, 109, 1273
DseDI GACNNNNNNGTC 1 cut(s) 37
EaeI YGGCCR 1 cut(s) 288
Eam1104I CTCTTC 2 cut(s) 221, 1542
Eam1105I GACNNNNNGTC 3 cut(s) 55, 109, 1273
EarI CTCTTC 2 cut(s) 221, 1542
Ecl136II GAGCTC 1 cut(s) 965
Eco130I CCWWGG 2 cut(s) 620, 1523
Eco24I GRGCYC 2 cut(s) 206, 967
Eco53kI GAGCTC 1 cut(s) 965
Eco72I CACGTG 1 cut(s) 159
Eco88I CYCGRG 1 cut(s) 1483
EcoICRI GAGCTC 1 cut(s) 965
EcoRII CCWGG 2 cut(s) 1093, 1474
EcoT14I CCWWGG 2 cut(s) 620, 1523
EcoT38I GRGCYC 2 cut(s) 206, 967
ErhI CCWWGG 2 cut(s) 620, 1523
Esp3I CGTCTC 3 cut(s) 599, 764, 1480
FaeI CATG 6 cut(s) 16, 419, 710, 1180, 1285, 1349
FalI AAGNNNNNCTT 4 cut(s) 428, 460, 1025, 1057
FaqI GGGAC 2 cut(s) 406, 1261
FatI CATG 6 cut(s) 12, 415, 706, 1176, 1281, 1345
FauI CCCGC 4 cut(s) 213, 656, 989, 1177
FbaI TGATCA 1 cut(s) 1078
FblI GTMKAC 1 cut(s) 48
Fnu4HI GCNGC 7 cut(s) 125, 218, 269, 315, 318, 327, 1196
FokI GGATG 2 cut(s) 560, 581
FriOI GRGCYC 2 cut(s) 206, 967
Fsp4HI GCNGC 7 cut(s) 125, 218, 269, 315, 318, 327, 1196
FspBI CTAG 6 cut(s) 582, 621, 939, 999, 1200, 1524
GluI GCNGC 7 cut(s) 125, 218, 269, 315, 318, 327, 1196
GsaI CCCAGC 1 cut(s) 212
GsuI CTGGAG 2 cut(s) 140, 212
HaeIII GGCC 3 cut(s) 94, 155, 290
HapII CCGG 4 cut(s) 70, 80, 371, 545
HgaI GACGC 2 cut(s) 274, 845
Hin1I GRCGYC 1 cut(s) 45
Hin1II CATG 6 cut(s) 16, 419, 710, 1180, 1285, 1349
HincII GTYRAC 3 cut(s) 49, 776, 1294
HindII GTYRAC 3 cut(s) 49, 776, 1294
HindIII AAGCTT 4 cut(s) 458, 737, 869, 1505
HpaII CCGG 4 cut(s) 70, 80, 371, 545
HphI GGTGA 3 cut(s) 40, 46, 903
Hpy166II GTNNAC 4 cut(s) 49, 85, 776, 1294
Hpy188I TCNGA 8 cut(s) 21, 43, 61, 384, 517, 1267, 1407, 1462
Hpy8I GTNNAC 4 cut(s) 49, 85, 776, 1294
Hpy99I CGWCG 6 cut(s) 47, 50, 53, 61, 238, 565
HpyAV CCTTC 7 cut(s) 413, 545, 924, 1027, 1312, 1319, 1415
HpyCH4III ACNGT 3 cut(s) 34, 510, 1333
HpyCH4IV ACGT 3 cut(s) 45, 158, 563
HpyF3I CTNAG 4 cut(s) 221, 383, 867, 1003
HpySE526I ACGT 3 cut(s) 45, 158, 563
Hsp92I GRCGYC 1 cut(s) 45
Hsp92II CATG 6 cut(s) 16, 419, 710, 1180, 1285, 1349
Ksp22I TGATCA 1 cut(s) 1078
Kzo9I GATC 5 cut(s) 184, 249, 751, 1078, 1321
LmnI GCTCC 7 cut(s) 82, 121, 196, 311, 970, 1046, 1192
Lsp1109I GCAGC 7 cut(s) 136, 229, 280, 301, 304, 313, 1207
LweI GCATC 5 cut(s) 917, 1053, 1158, 1403, 1541
MaeI CTAG 6 cut(s) 582, 621, 939, 999, 1200, 1524
MaeII ACGT 3 cut(s) 45, 158, 563
MaeIII GTNAC 5 cut(s) 28, 440, 833, 1205, 1447
MalI GATC 5 cut(s) 186, 251, 753, 1080, 1323
MboI GATC 5 cut(s) 184, 249, 751, 1078, 1321
MboII GAAGA 8 cut(s) 74, 238, 310, 887, 959, 984, 1502, 1529
MflI RGATCY 1 cut(s) 1321
MhlI GDGCHC 3 cut(s) 206, 704, 967
MlsI TGGCCA 1 cut(s) 290
MluCI AATT 5 cut(s) 284, 973, 987, 1073, 1555
MluNI TGGCCA 1 cut(s) 290
MlyI GAGTC 7 cut(s) 10, 59, 62, 98, 238, 781, 1238
MmeI TCCRAC 3 cut(s) 39, 66, 546
Mox20I TGGCCA 1 cut(s) 290
MroXI GAANNNNTTC 1 cut(s) 925
MscI TGGCCA 1 cut(s) 290
MseI TTAA 3 cut(s) 1239, 1515, 1554
MslI CAYNNNNRTG 1 cut(s) 1175
Msp20I TGGCCA 1 cut(s) 290
MspA1I CMGCKG 3 cut(s) 118, 208, 220
MspI CCGG 4 cut(s) 70, 80, 371, 545
MspR9I CCNGG 4 cut(s) 70, 545, 1095, 1476
MvaI CCWGG 2 cut(s) 1095, 1476
MvnI CGCG 1 cut(s) 984
NciI CCSGG 2 cut(s) 70, 545
NdeII GATC 5 cut(s) 184, 249, 751, 1078, 1321
NlaIII CATG 6 cut(s) 16, 419, 710, 1180, 1285, 1349
NlaIV GGNNCC 3 cut(s) 154, 198, 1323
NmeAIII GCCGAG 2 cut(s) 225, 1233
NmuCI GTSAC 4 cut(s) 28, 833, 1205, 1447
NspI RCATGY 1 cut(s) 1349
PaeI GCATGC 1 cut(s) 1349
PagI TCATGA 1 cut(s) 12
PcsI WCGNNNNNNNCGW 1 cut(s) 176
PdmI GAANNNNTTC 1 cut(s) 925
PfeI GAWTC 6 cut(s) 301, 610, 797, 1053, 1479, 1493
PfoI TCCNGGA 1 cut(s) 1093
PkrI GCNGC 7 cut(s) 126, 219, 270, 316, 319, 328, 1197
PleI GAGTC 7 cut(s) 10, 59, 61, 98, 237, 780, 1238
PmaCI CACGTG 1 cut(s) 159
PmlI CACGTG 1 cut(s) 159
PpsI GAGTC 7 cut(s) 10, 59, 61, 98, 237, 780, 1238
Ppu21I YACGTR 1 cut(s) 159
Psp124BI GAGCTC 1 cut(s) 967
Psp6I CCWGG 2 cut(s) 1093, 1474
PspCI CACGTG 1 cut(s) 159
PspFI CCCAGC 1 cut(s) 208
PspGI CCWGG 2 cut(s) 1093, 1474
PspN4I GGNNCC 3 cut(s) 154, 198, 1323
PspPI GGNCC 2 cut(s) 93, 153
PstI CTGCAG 3 cut(s) 699, 1024, 1317
PsuI RGATCY 1 cut(s) 1321
PvuII CAGCTG 1 cut(s) 220
RsaI GTAC 2 cut(s) 343, 1335
RsaNI GTAC 2 cut(s) 342, 1334
RseI CAYNNNNRTG 1 cut(s) 1175
SacI GAGCTC 1 cut(s) 967
SalI GTCGAC 1 cut(s) 47
SaqAI TTAA 3 cut(s) 1239, 1515, 1554
SatI GCNGC 7 cut(s) 125, 218, 269, 315, 318, 327, 1196
Sau3AI GATC 5 cut(s) 184, 249, 751, 1078, 1321
Sau96I GGNCC 2 cut(s) 93, 153
SchI GAGTC 7 cut(s) 10, 59, 62, 98, 238, 781, 1238
ScrFI CCNGG 4 cut(s) 70, 545, 1095, 1476
SduI GDGCHC 3 cut(s) 206, 704, 967
SfaNI GCATC 5 cut(s) 917, 1053, 1158, 1403, 1541
SfcI CTRYAG 3 cut(s) 695, 1020, 1313
SgrDI CGTCGACG 1 cut(s) 47
SmiMI CAYNNNNRTG 1 cut(s) 1175
SmlI CTYRAG 2 cut(s) 353, 488
SmoI CTYRAG 2 cut(s) 353, 488
SphI GCATGC 1 cut(s) 1349
Sse9I AATT 5 cut(s) 284, 973, 987, 1073, 1555
SsiI CCGC 9 cut(s) 116, 164, 206, 587, 614, 663, 982, 1184, 1392
SspI AATATT 1 cut(s) 1519
SspMI CTAG 6 cut(s) 582, 621, 939, 999, 1200, 1524
SstI GAGCTC 1 cut(s) 967
StyD4I CCNGG 4 cut(s) 68, 543, 1093, 1474
StyI CCWWGG 2 cut(s) 620, 1523
TaaI ACNGT 3 cut(s) 34, 510, 1333
TaiI ACGT 3 cut(s) 48, 161, 566
TaqI TCGA 3 cut(s) 48, 102, 410
TasI AATT 5 cut(s) 284, 973, 987, 1073, 1555
TatI WGTACW 1 cut(s) 1333
TfiI GAWTC 6 cut(s) 301, 610, 797, 1053, 1479, 1493
Tru1I TTAA 3 cut(s) 1239, 1515, 1554
Tru9I TTAA 3 cut(s) 1239, 1515, 1554
TscAI CASTG 6 cut(s) 134, 515, 704, 1122, 1210, 1456
TseFI GTSAC 4 cut(s) 28, 833, 1205, 1447
TseI GCWGC 7 cut(s) 124, 217, 268, 314, 317, 326, 1195
Tsp45I GTSAC 4 cut(s) 28, 833, 1205, 1447
TspDTI ATGAA 8 cut(s) 272, 377, 432, 564, 858, 960, 1485, 1551
TspGWI ACGGA 4 cut(s) 222, 359, 792, 1169
TspRI CASTG 6 cut(s) 134, 515, 704, 1122, 1210, 1456
XapI RAATTY 2 cut(s) 987, 1073
XbaI TCTAGA 1 cut(s) 938
XceI RCATGY 1 cut(s) 1349
XmaJI CCTAGG 2 cut(s) 620, 1523
XmiI GTMKAC 1 cut(s) 48
XmnI GAANNNNTTC 1 cut(s) 925
XspI CTAG 6 cut(s) 582, 621, 939, 999, 1200, 1524
ZraI GACGTC 1 cut(s) 46
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.