Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0016887

Physical Location & Seq

Genomic Coordinates Forward (+)

21863959 .. 21867702

Gene Structure 3744 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g28380.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2985 bp

ATGGTCTTCATCAAAACCATTTTCTTTCTTCTGTTCCAGCATTTTGTTATAACATCTTGTAATGCAGTTATAGGTCATCACCACACTCCTCATCACTCTTTATTAAGAGATAAGGCTGCTCTTCTACAGCTCAAGAAGGCCATTACATATGATCCAAATTCCACTCTAGCTAATTGGAATGAAGGTACTGATGTTTGCAACTTCACCGGTGTAGGCTGCAACAAACAGCGTCATCGTGTAACTGAACTCCTTCTGCATGATCATAAGCTTGTAGGGAAGCTTTCACCTATCATTTCAAATCTAACCGGCCTTCGTTACTTGGAGCTTGTAGGCAATCACTTTTACGGAACTCTCCCTCCTGAAATTTCCTTGCTCAGACGCCTGCATCATTTACGGATTGAGGGGAACAACTTTCCTGGTTCTATACCAGATTCCTTAGTCCTTCCTTCACAACTCACTGTTGTTACTCTTTTGCAAAACAATTTCTCTGGTGCAGTTCCACCTGCACTCTTCTCCAACTGCTCTGTCTTAAGGGTTTTGGATATTTCCAACAACTTTCTTTCAGGAAAAATTCCAAGAGAAATCGGGAATTGTCCAAACCTATGGACCCTCAATTTATACAACAATCAATTCACTGGAGAAATTCCTTTCTCTTTGACTAATACCTCGTTGGTCAATCTAGACGTCGAGTTCAATCATCTTTCTGGTGAATTGCCCGTCAAACTTGTGGAGAACTTGCCTCACATTCTGTATCTTCACTTGTCAAACAATGACATGGTAAGCCATGATGGAAACACCAATCTCGATCCATTCTTCACTGCCCTTGCAAATTGCACTAGTCTAGAGGAGCTTGAACTGGCGAGTATGGGACTCGGAGGAACATTACCTAGTTCCATTGGAGGACTTGGTGTCAACTTTACAAATCTGTTGCTGCAAGAAAACCAACTGATTGGATCAGTTCCTTCAAATATAGGTAACATATCTAAGCTTGTGGTCCTGAATTTGACCTCCAATCTTATGAATGGAACAATTTCAGCAAACATAAGTCACTTGTCACACTTGGAACAGCTTTTCTTATCTCACAACTTTTTCACCAGCACCATACCAGAAGCACTTGGCCATCTTCCTCACCTAGGCCTGCTTGATCTGTCTCATAATTCGTTCTTCGGAAATATTCCAAGCAGTCTAGGAAATTTAGCCAGGCTGAATTATCTGTTCCTCAACAACAACCTCCTATCTGGAACCATCCCTCCCGCATTAGGACGCTGCACAGAACTGTACAGGCTTGACTTATCATTCAACAGATTGGCAGGGTTAATCCCCCCGGAATTATCAGGTTTGAGTGAGATCAGAATTTTCATAAACCTCTCACACAATCATCTTGAAGGGTCTATACCGATTGAGCTCAGCAAGCTAGAAGATGTTCAAGAGATGGATCTCTCATCAAATAACCTGAGTGGGAGTATCTTTCCACAGATATCAAGCTGTATCGCATTGACTCTGATAAACTTCTCACACAATGCTTTGGAAGGGAGCCTCCCAGATTCCATAGGTGAGCTAAAGAACCTTGTGTCTTTTGATGTTTCAGATAACCACCTGTCCGGAAAGATTCCGATGAGCCTCAACAAGAGTCGGACACTCACATATCTAAATCTTTCATATAATGACTTCGAAGGAAAGGTTCCTTATGGTGGCATATTTGAATTAGTGTCAGATACCTCTTTCTTGGGCAACAAGCATCTTTGTGGAAAACTTGCTGCGAAACATGTTTGCCCTCGGACAAAGCATTTGTTTCGTTCTCGTATATTCTTAATAATATTCGTCATAGTGATATTCATTTCAACATCCTTATCAATCATATGTTGTGTGATTGCGTTCCGCCGCGTTAAGGTATTGGTTTCACCCCAGAAGGCTGCAACTGTAAAGAAGCCAACACAACCTGAAGTGATTCTGAATTTCCCAAGAGTTACATACCGAGATTTGTCAGAGGCCACCGGTGGATTTGATGATCAGAGACTGATTGGGACGGGGAGCTATGGACGAGTCTACAGGGGAGTTCTTCCAGATGGGACAACCATAGCAGTCAAGGTGTTACATTTACAATCTGGAAATTCAACAAAGAGTTTTAACAGAGAATGCCAAGTCTTAAGGAGAATAAGGCACAGGAATCTTATAAGGATCATAACAGCGTGCAGTCTACCAGATTTCAAGGCTATTGTTCTTCCTTATATGGCAAATGGTAGCTTGGATAGTCGTCTCTATCCACATTCACAGGCCGGTCTAGGTTCAGGCTCTTCTGATCTGAGTCTCATTCAGAGGGTCAATATTTGTAGTGACATTGCGGAAGGGATGGCCTATCTTCATCATTACTCTCCGGTCAGAGTTATACACTGTGACCTGAAACCAAGCAATGTTCTTCTCAACGATGACATGACTGCTTTAGTTTCTGACTTTGGGATTGCAAGATTAGTGATAGCCGGAGGAGCAGGAGGAGGAAATGCAGCTGGTCTTGAGAACATGGGGAACTCTACTGCTAATATATTATGTGGATCTATTGGATACATAGCACCAGAGTATGGGTTTGGATCAAGCACATCTACAAAAGGCGATGTATACAGCTTCGGAGTTCTGGTTCTAGAAATGGTGACAAGAAAAAGGCCAATAGATGACATGTTTGTTGGGGGACTAAGCCTGCACAGCTGGGTAAAGAACCATTATCATGGAAGGATTGACAAAGTGGTCGACTCTTCCTTGTTGAGAGCTTCTAGAGATCAGTCACCTGAGGTGAAAAAGATGTGGGATGTTGCCATAGAAGAAATGATAGAGTTGGGTATTCTTTGCACTCAAGAGTCCCCTTCGACTAGGCCTACAATGGTCGATGCTGCAGATGATTTGGATCGGCTGAAGAGATATCTTGGTGGGGATACTACTGCGACATTTGCCTCTTCATTAGGAATTTCTTCATCTACCATAGACGACGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05169 map04010 map04064 map04620 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05169

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8 Pkinase

Protein Analysis

995

Amino Acids

108.81

Weight (kDa)

6.56

Isoelectric Point (pI)

37.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	36 - 74	3.9e-12	Leucine rich repeat N-terminal domain
LRR_8	PF13855	152 - 211	2.7e-08	Leucine rich repeat
LRR_8	PF13855	329 - 387	8.5e-07	Leucine rich repeat
LRR_14	PF23598	331 - 486	9.5e-09	Leucine-rich repeat region
Pkinase	PF00069	669 - 961	1.2e-38	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	671 - 961	1.6e-36	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016887)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g28380 FvH4_6g28380
malus_domestica	MD17G1226200.v1.1
prunus_persica	Prupe.3G102400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0132491
rosa_laevigata	RLG00000019260
rosa_multiflora	Rmu_sc0005538.1_g000005
rosa_roxburghii	Rroxscaffold_2G00111910
rosa_rugosa	Rorug02G0304800
rosa_samantha	Rh2AG357600 Rh2BG364200 Rh2CG341300 Rh2DG380900
rosa_wichuraiana	Rw2G029100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	50, 2174
AarI	CACCTGC	1 cut(s)	511
AasI	GACNNNNNNGTC	1 cut(s)	2738
AatII	GACGTC	1 cut(s)	687
Acc36I	ACCTGC	1 cut(s)	511
AccB7I	CCANNNNNTGG	1 cut(s)	2576
AccI	GTMKAC	4 cut(s)	2046, 2197, 2613, 2742
AccII	CGCG	1 cut(s)	1884
AccIII	TCCGGA	1 cut(s)	1601
AciI	CCGC	4 cut(s)	1254, 1879, 1882, 2342
AclWI	GGATC	8 cut(s)	146, 800, 961, 1443, 2186, 2557, 2593, 2904
AcoI	YGGCCR	1 cut(s)	1117
AcuI	CTGAAG	2 cut(s)	1962, 2924
AcyI	GRCGYC	2 cut(s)	379, 684
AfaI	GTAC	2 cut(s)	187, 1280
AfiI	CCNNNNNNNGG	5 cut(s)	1133, 1259, 1691, 1888, 2576
AflII	CTTAAG	2 cut(s)	529, 2146
AflIII	ACRYGT	2 cut(s)	1765, 2670
AgeI	ACCGGT	2 cut(s)	206, 1994
AhdI	GACNNNNNGTC	1 cut(s)	908
AhlI	ACTAGT	1 cut(s)	836
AjnI	CCWGG	2 cut(s)	415, 1199
AloI	GAACNNNNNNTCC	6 cut(s)	340, 372, 1234, 1266, 2616, 2648
Alw21I	GWGCWC	1 cut(s)	1407
Alw26I	GTCTC	4 cut(s)	1155, 2008, 2261, 2312
AlwI	GGATC	8 cut(s)	146, 800, 961, 1443, 2186, 2557, 2593, 2904
AlwNI	CAGNNNCTG	1 cut(s)	2017
Aor13HI	TCCGGA	1 cut(s)	1601
AoxI	GGCC	9 cut(s)	138, 307, 1117, 1135, 1989, 2274, 2352, 2657, 2864
ApeKI	GCWGC	8 cut(s)	116, 216, 931, 1266, 1757, 1913, 2501, 2882
ArsI	GACNNNNNNTTYG	2 cut(s)	1771, 1803
AsiGI	ACCGGT	2 cut(s)	206, 1994
Asp700I	GAANNNNTTC	5 cut(s)	249, 1030, 1422, 1947, 2959
AspA2I	CCTAGG	1 cut(s)	1132
AspS9I	GGNCC	2 cut(s)	606, 994
AsuC2I	CCSGG	1 cut(s)	1325
AsuII	TTCGAA	1 cut(s)	1671
AvaII	GGWCC	2 cut(s)	606, 994
AvrII	CCTAGG	1 cut(s)	1132
AxyI	CCTNAGG	1 cut(s)	2781
BaeI	ACNNNNGTAYC	2 cut(s)	177, 210
BalI	TGGCCA	1 cut(s)	1119
BanII	GRGCYC	1 cut(s)	1407
BarI	GAAGNNNNNNTAC	2 cut(s)	1377, 1409
Bbv12I	GWGCWC	1 cut(s)	1407
BbvI	GCAGC	8 cut(s)	103, 203, 918, 1253, 1744, 1900, 2513, 2869
BccI	CCATC	6 cut(s)	782, 1128, 1253, 1426, 2060, 2344
BcgI	CGANNNNNNTGC	2 cut(s)	1775, 1809
BciT130I	CCWGG	2 cut(s)	417, 1201
BciVI	GTATCC	2 cut(s)	2552, 2917
BclI	TGATCA	2 cut(s)	259, 2008
BcnI	CCSGG	1 cut(s)	1325
BcoDI	GTCTC	4 cut(s)	1155, 2008, 2261, 2312
BcuI	ACTAGT	1 cut(s)	836
BfmI	CTRYAG	3 cut(s)	125, 2047, 2883
BfrI	CTTAAG	2 cut(s)	529, 2146
BfuAI	ACCTGC	1 cut(s)	511
BfuI	GTATCC	2 cut(s)	2552, 2917
BisI	GCNGC	9 cut(s)	117, 217, 932, 1267, 1758, 1882, 1914, 2502, 2883
BlnI	CCTAGG	1 cut(s)	1132
BlpI	GCTNAGC	1 cut(s)	1406
BlsI	GCNGC	9 cut(s)	118, 218, 933, 1268, 1759, 1883, 1915, 2503, 2884
Bme1390I	CCNGG	3 cut(s)	417, 1201, 1325
Bme18I	GGWCC	2 cut(s)	606, 994
BmeRI	GACNNNNNGTC	1 cut(s)	908
BmgT120I	GGNCC	2 cut(s)	606, 994
BmiI	GGNNCC	4 cut(s)	608, 1243, 1535, 1683
BmrFI	CCNGG	3 cut(s)	417, 1201, 1325
BmsI	GCATC	3 cut(s)	394, 1747, 2869
BpmI	CTGGAG	1 cut(s)	657
Bpu1102I	GCTNAGC	1 cut(s)	1406
Bpu14I	TTCGAA	1 cut(s)	1671
BpuEI	CTTGAG	3 cut(s)	116, 2531, 2829
BpuMI	CCSGG	1 cut(s)	1325
BsaBI	GATNNNNATC	1 cut(s)	2895
BsaHI	GRCGYC	2 cut(s)	379, 684
BsaJI	CCNNGG	3 cut(s)	1132, 1323, 1775
BsaWI	WCCGGW	4 cut(s)	206, 1601, 1994, 2374
BsaXI	ACNNNNNCTCC	6 cut(s)	340, 370, 1234, 1264, 2616, 2646
Bsc4I	CCNNNNNNNGG	5 cut(s)	1133, 1259, 1691, 1888, 2576
Bse118I	RCCGGY	4 cut(s)	206, 305, 1994, 2276
Bse1I	ACTGG	2 cut(s)	640, 861
Bse21I	CCTNAGG	1 cut(s)	2781
Bse3DI	GCAATG	2 cut(s)	2337, 2416
Bse8I	GATNNNNATC	1 cut(s)	2895
BseAI	TCCGGA	1 cut(s)	1601
BseBI	CCWGG	2 cut(s)	417, 1201
BseDI	CCNNGG	3 cut(s)	1132, 1323, 1775
BseGI	GGATG	4 cut(s)	1245, 1844, 2355, 2806
BseJI	GATNNNNATC	1 cut(s)	2895
BseLI	CCNNNNNNNGG	5 cut(s)	1133, 1259, 1691, 1888, 2576
BseMI	GCAATG	2 cut(s)	2337, 2416
BseMII	CTCAG	5 cut(s)	388, 1420, 1445, 2294, 2772
BseNI	ACTGG	2 cut(s)	640, 861
BseRI	GAGGAG	4 cut(s)	78, 860, 2496, 2505
BseXI	GCAGC	8 cut(s)	103, 203, 918, 1253, 1744, 1900, 2513, 2869
BseYI	CCCAGC	1 cut(s)	2700
BsgI	GTGCAG	5 cut(s)	489, 513, 1252, 2212, 2678
Bsh1236I	CGCG	1 cut(s)	1884
BshFI	GGCC	9 cut(s)	140, 309, 1119, 1137, 1991, 2276, 2354, 2659, 2866
BshTI	ACCGGT	2 cut(s)	206, 1994
BsiHKAI	GWGCWC	1 cut(s)	1407
BsiSI	CCGG	8 cut(s)	207, 306, 1325, 1602, 1995, 2277, 2375, 2478
BslFI	GGGAC	5 cut(s)	882, 2038, 2083, 2697, 2836
BslI	CCNNNNNNNGG	5 cut(s)	1133, 1259, 1691, 1888, 2576
BsmAI	GTCTC	4 cut(s)	1155, 2008, 2261, 2312
BsmBI	CGTCTC	1 cut(s)	2261
BsmFI	GGGAC	5 cut(s)	882, 2038, 2083, 2697, 2836
BsmI	GAATGC	1 cut(s)	2141
BsnI	GGCC	9 cut(s)	140, 309, 1119, 1137, 1991, 2276, 2354, 2659, 2866
Bsp119I	TTCGAA	1 cut(s)	1671
Bsp1286I	GDGCHC	1 cut(s)	1407
Bsp13I	TCCGGA	1 cut(s)	1601
Bsp1407I	TGTACA	1 cut(s)	1278
Bsp1720I	GCTNAGC	1 cut(s)	1406
BspACI	CCGC	4 cut(s)	1254, 1879, 1882, 2342
BspANI	GGCC	9 cut(s)	140, 309, 1119, 1137, 1991, 2276, 2354, 2659, 2866
BspCNI	CTCAG	5 cut(s)	387, 1419, 1446, 2295, 2773
BspEI	TCCGGA	1 cut(s)	1601
BspFNI	CGCG	1 cut(s)	1884
BspLI	GGNNCC	4 cut(s)	608, 1243, 1535, 1683
BspMAI	CTGCAG	1 cut(s)	2887
BspMI	ACCTGC	1 cut(s)	511
BspPI	GGATC	8 cut(s)	146, 800, 961, 1443, 2186, 2557, 2593, 2904
BspQI	GCTCTTC	2 cut(s)	126, 2299
BspT104I	TTCGAA	1 cut(s)	1671
BspTI	CTTAAG	2 cut(s)	529, 2146
BsrDI	GCAATG	2 cut(s)	2337, 2416
BsrFI	RCCGGY	4 cut(s)	206, 305, 1994, 2276
BsrGI	TGTACA	1 cut(s)	1278
BsrI	ACTGG	2 cut(s)	640, 861
BssAI	RCCGGY	4 cut(s)	206, 305, 1994, 2276
BssECI	CCNNGG	3 cut(s)	1132, 1323, 1775
BssNAI	GTATAC	1 cut(s)	2614
BssNI	GRCGYC	2 cut(s)	379, 684
BssT1I	CCWWGG	1 cut(s)	1132
Bst1107I	GTATAC	1 cut(s)	2614
Bst2UI	CCWGG	2 cut(s)	417, 1201
Bst4CI	ACNGT	4 cut(s)	460, 1278, 1921, 2393
Bst6I	CTCTTC	6 cut(s)	126, 515, 2299, 2752, 2900, 2950
BstACI	GRCGYC	2 cut(s)	379, 684
BstAFI	CTTAAG	2 cut(s)	529, 2146
BstAUI	TGTACA	1 cut(s)	1278
BstBI	TTCGAA	1 cut(s)	1671
BstC8I	GCNNGC	5 cut(s)	383, 1139, 1412, 2191, 2693
BstDEI	CTNAG	8 cut(s)	374, 436, 984, 1406, 1454, 2303, 2687, 2781
BstENI	CCTNNNNNAGG	1 cut(s)	1131
BstF5I	GGATG	4 cut(s)	1245, 1844, 2355, 2806
BstFNI	CGCG	1 cut(s)	1884
BstMAI	GTCTC	4 cut(s)	1155, 2008, 2261, 2312
BstMWI	GCNNNNNNNGC	4 cut(s)	1411, 2483, 2697, 2939
BstNI	CCWGG	2 cut(s)	417, 1201
BstNSI	RCATGY	2 cut(s)	1769, 2674
BstSCI	CCNGG	3 cut(s)	415, 1199, 1323
BstSFI	CTRYAG	3 cut(s)	125, 2047, 2883
BstUI	CGCG	1 cut(s)	1884
BstV1I	GCAGC	8 cut(s)	103, 203, 918, 1253, 1744, 1900, 2513, 2869
BstX2I	RGATCY	2 cut(s)	1435, 2549
BstXI	CCANNNNNNTGG	3 cut(s)	603, 950, 2720
BstYI	RGATCY	2 cut(s)	1435, 2549
BstZ17I	GTATAC	1 cut(s)	2614
Bsu36I	CCTNAGG	1 cut(s)	2781
BsuI	GTATCC	2 cut(s)	2552, 2917
BsuRI	GGCC	9 cut(s)	140, 309, 1119, 1137, 1991, 2276, 2354, 2659, 2866
BtgZI	GCGATG	1 cut(s)	2622
BtsCI	GGATG	4 cut(s)	1245, 1844, 2355, 2806
BtsI	GCAGTG	1 cut(s)	816
BtsIMutI	CAGTG	4 cut(s)	456, 633, 816, 2389
BveI	ACCTGC	1 cut(s)	511
Cac8I	GCNNGC	5 cut(s)	383, 1139, 1412, 2191, 2693
CaiI	CAGNNNCTG	1 cut(s)	2017
Cfr10I	RCCGGY	4 cut(s)	206, 305, 1994, 2276
Cfr13I	GGNCC	2 cut(s)	606, 994
CseI	GACGC	3 cut(s)	218, 387, 1272
Csp6I	GTAC	2 cut(s)	186, 1279
CspAI	ACCGGT	2 cut(s)	206, 1994
CviAII	CATG	8 cut(s)	257, 775, 785, 1766, 2431, 2518, 2671, 2720
CviQI	GTAC	2 cut(s)	186, 1279
DdeI	CTNAG	8 cut(s)	374, 436, 984, 1406, 1454, 2303, 2687, 2781
DrdI	GACNNNNNNGTC	1 cut(s)	2738
DriI	GACNNNNNGTC	1 cut(s)	908
DseDI	GACNNNNNNGTC	1 cut(s)	2738
EaeI	YGGCCR	1 cut(s)	1117
Eam1104I	CTCTTC	6 cut(s)	126, 515, 2299, 2752, 2900, 2950
Eam1105I	GACNNNNNGTC	1 cut(s)	908
EarI	CTCTTC	6 cut(s)	126, 515, 2299, 2752, 2900, 2950
EciI	GGCGGA	1 cut(s)	1868
Ecl136II	GAGCTC	1 cut(s)	1405
Eco130I	CCWWGG	1 cut(s)	1132
Eco147I	AGGCCT	2 cut(s)	1137, 2866
Eco24I	GRGCYC	1 cut(s)	1407
Eco32I	GATATC	2 cut(s)	1479, 2912
Eco47I	GGWCC	2 cut(s)	606, 994
Eco53kI	GAGCTC	1 cut(s)	1405
Eco57I	CTGAAG	2 cut(s)	1962, 2924
Eco81I	CCTNAGG	1 cut(s)	2781
EcoICRI	GAGCTC	1 cut(s)	1405
EcoNI	CCTNNNNNAGG	1 cut(s)	1131
EcoRII	CCWGG	2 cut(s)	415, 1199
EcoRV	GATATC	2 cut(s)	1479, 2912
EcoT14I	CCWWGG	1 cut(s)	1132
EcoT38I	GRGCYC	1 cut(s)	1407
ErhI	CCWWGG	1 cut(s)	1132
Esp3I	CGTCTC	1 cut(s)	2261
FaeI	CATG	8 cut(s)	260, 778, 788, 1769, 2434, 2521, 2674, 2723
FaqI	GGGAC	5 cut(s)	882, 2038, 2083, 2697, 2836
FatI	CATG	8 cut(s)	256, 774, 784, 1765, 2430, 2517, 2670, 2719
FauI	CCCGC	1 cut(s)	1261
FauNDI	CATATG	2 cut(s)	148, 1859
FbaI	TGATCA	2 cut(s)	259, 2008
FblI	GTMKAC	4 cut(s)	2046, 2197, 2613, 2742
Fnu4HI	GCNGC	9 cut(s)	117, 217, 932, 1267, 1758, 1882, 1914, 2502, 2883
FokI	GGATG	4 cut(s)	1232, 1831, 2362, 2813
FriOI	GRGCYC	1 cut(s)	1407
Fsp4HI	GCNGC	9 cut(s)	117, 217, 932, 1267, 1758, 1882, 1914, 2502, 2883
GluI	GCNGC	9 cut(s)	117, 217, 932, 1267, 1758, 1882, 1914, 2502, 2883
GsaI	CCCAGC	1 cut(s)	2704
GsuI	CTGGAG	1 cut(s)	657
HaeIII	GGCC	9 cut(s)	140, 309, 1119, 1137, 1991, 2276, 2354, 2659, 2866
HapII	CCGG	8 cut(s)	207, 306, 1325, 1602, 1995, 2277, 2375, 2478
HgaI	GACGC	3 cut(s)	218, 387, 1272
Hin1I	GRCGYC	2 cut(s)	379, 684
Hin1II	CATG	8 cut(s)	260, 778, 788, 1769, 2434, 2521, 2674, 2723
HincII	GTYRAC	2 cut(s)	913, 2743
HindII	GTYRAC	2 cut(s)	913, 2743
HindIII	AAGCTT	3 cut(s)	266, 278, 986
HpaII	CCGG	8 cut(s)	207, 306, 1325, 1602, 1995, 2277, 2375, 2478
Hpy166II	GTNNAC	5 cut(s)	913, 2047, 2198, 2614, 2743
Hpy8I	GTNNAC	5 cut(s)	913, 2047, 2198, 2614, 2743
Hpy99I	CGWCG	2 cut(s)	689, 2981
HpyCH4III	ACNGT	4 cut(s)	460, 1278, 1921, 2393
HpyCH4IV	ACGT	1 cut(s)	684
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1411, 2483, 2697, 2939
HpyF3I	CTNAG	8 cut(s)	374, 436, 984, 1406, 1454, 2303, 2687, 2781
HpySE526I	ACGT	1 cut(s)	684
Hsp92I	GRCGYC	2 cut(s)	379, 684
Hsp92II	CATG	8 cut(s)	260, 778, 788, 1769, 2434, 2521, 2674, 2723
Kpn2I	TCCGGA	1 cut(s)	1601
Ksp22I	TGATCA	2 cut(s)	259, 2008
LguI	GCTCTTC	2 cut(s)	126, 2299
LmnI	GCTCC	5 cut(s)	322, 847, 1533, 2031, 2483
Lsp1109I	GCAGC	8 cut(s)	103, 203, 918, 1253, 1744, 1900, 2513, 2869
LweI	GCATC	3 cut(s)	394, 1747, 2869
MaeII	ACGT	1 cut(s)	684
MflI	RGATCY	2 cut(s)	1435, 2549
MhlI	GDGCHC	1 cut(s)	1407
MlsI	TGGCCA	1 cut(s)	1119
MluNI	TGGCCA	1 cut(s)	1119
MlyI	GAGTC	7 cut(s)	864, 1492, 1639, 2052, 2314, 2738, 2858
MmeI	TCCRAC	3 cut(s)	540, 573, 1613
Mox20I	TGGCCA	1 cut(s)	1119
MroI	TCCGGA	1 cut(s)	1601
MroXI	GAANNNNTTC	5 cut(s)	249, 1030, 1422, 1947, 2959
MscI	TGGCCA	1 cut(s)	1119
MseI	TTAA	7 cut(s)	104, 530, 1316, 1811, 1887, 2127, 2147
MslI	CAYNNNNRTG	2 cut(s)	1743, 2718
Msp20I	TGGCCA	1 cut(s)	1119
MspA1I	CMGCKG	2 cut(s)	2504, 2700
MspCI	CTTAAG	2 cut(s)	529, 2146
MspI	CCGG	8 cut(s)	207, 306, 1325, 1602, 1995, 2277, 2375, 2478
MspR9I	CCNGG	3 cut(s)	417, 1201, 1325
Mva1269I	GAATGC	1 cut(s)	2141
MvaI	CCWGG	2 cut(s)	417, 1201
MvnI	CGCG	1 cut(s)	1884
MwoI	GCNNNNNNNGC	4 cut(s)	1411, 2483, 2697, 2939
NciI	CCSGG	1 cut(s)	1325
NdeI	CATATG	2 cut(s)	148, 1859
NlaIII	CATG	8 cut(s)	260, 778, 788, 1769, 2434, 2521, 2674, 2723
NlaIV	GGNNCC	4 cut(s)	608, 1243, 1535, 1683
NmuCI	GTSAC	6 cut(s)	1046, 1053, 2333, 2393, 2644, 2775
NspI	RCATGY	2 cut(s)	1769, 2674
NspV	TTCGAA	1 cut(s)	1671
PaqCI	CACCTGC	1 cut(s)	511
PceI	AGGCCT	2 cut(s)	1137, 2866
PciI	ACATGT	2 cut(s)	1765, 2670
PciSI	GCTCTTC	2 cut(s)	126, 2299
PctI	GAATGC	1 cut(s)	2141
PdmI	GAANNNNTTC	5 cut(s)	249, 1030, 1422, 1947, 2959
PfeI	GAWTC	5 cut(s)	431, 1544, 1609, 1948, 2167
PflMI	CCANNNNNTGG	1 cut(s)	2576
PinAI	ACCGGT	2 cut(s)	206, 1994
PkrI	GCNGC	9 cut(s)	118, 218, 933, 1268, 1759, 1883, 1915, 2503, 2884
PleI	GAGTC	7 cut(s)	864, 1492, 1638, 2051, 2313, 2738, 2857
PpsI	GAGTC	7 cut(s)	864, 1492, 1638, 2051, 2313, 2738, 2857
PscI	ACATGT	2 cut(s)	1765, 2670
PsiI	TTATAA	2 cut(s)	50, 2174
Psp124BI	GAGCTC	1 cut(s)	1407
Psp6I	CCWGG	2 cut(s)	415, 1199
PspFI	CCCAGC	1 cut(s)	2700
PspGI	CCWGG	2 cut(s)	415, 1199
PspN4I	GGNNCC	4 cut(s)	608, 1243, 1535, 1683
PspPI	GGNCC	2 cut(s)	606, 994
PstI	CTGCAG	1 cut(s)	2887
PstNI	CAGNNNCTG	1 cut(s)	2017
PsuI	RGATCY	2 cut(s)	1435, 2549
PvuII	CAGCTG	2 cut(s)	2504, 2700
RsaI	GTAC	2 cut(s)	187, 1280
RsaNI	GTAC	2 cut(s)	186, 1279
RseI	CAYNNNNRTG	2 cut(s)	1743, 2718
SacI	GAGCTC	1 cut(s)	1407
SalI	GTCGAC	1 cut(s)	2741
SapI	GCTCTTC	2 cut(s)	126, 2299
SaqAI	TTAA	7 cut(s)	104, 530, 1316, 1811, 1887, 2127, 2147
SatI	GCNGC	9 cut(s)	117, 217, 932, 1267, 1758, 1882, 1914, 2502, 2883
Sau96I	GGNCC	2 cut(s)	606, 994
SchI	GAGTC	7 cut(s)	864, 1492, 1639, 2052, 2314, 2738, 2858
ScrFI	CCNGG	3 cut(s)	417, 1201, 1325
SduI	GDGCHC	1 cut(s)	1407
SfaNI	GCATC	3 cut(s)	394, 1747, 2869
SfcI	CTRYAG	3 cut(s)	125, 2047, 2883
SfuI	TTCGAA	1 cut(s)	1671
SgrAI	CRCCGGYG	2 cut(s)	206, 1994
SinI	GGWCC	2 cut(s)	606, 994
SmiMI	CAYNNNNRTG	2 cut(s)	1743, 2718
SmlI	CTYRAG	5 cut(s)	131, 529, 2146, 2510, 2844
SmoI	CTYRAG	5 cut(s)	131, 529, 2146, 2510, 2844
SpeI	ACTAGT	1 cut(s)	836
SseBI	AGGCCT	2 cut(s)	1137, 2866
SsiI	CCGC	4 cut(s)	1254, 1879, 1882, 2342
SspI	AATATT	3 cut(s)	1174, 1818, 2326
SstI	GAGCTC	1 cut(s)	1407
StuI	AGGCCT	2 cut(s)	1137, 2866
StyD4I	CCNGG	3 cut(s)	415, 1199, 1323
StyI	CCWWGG	1 cut(s)	1132
TaaI	ACNGT	4 cut(s)	460, 1278, 1921, 2393
TaiI	ACGT	1 cut(s)	687
TaqI	TCGA	6 cut(s)	687, 804, 1671, 2742, 2858, 2877
TatI	WGTACW	1 cut(s)	1278
TauI	GCSGC	1 cut(s)	1884
TfiI	GAWTC	5 cut(s)	431, 1544, 1609, 1948, 2167
Tru1I	TTAA	7 cut(s)	104, 530, 1316, 1811, 1887, 2127, 2147
Tru9I	TTAA	7 cut(s)	104, 530, 1316, 1811, 1887, 2127, 2147
TscAI	CASTG	4 cut(s)	463, 640, 823, 2396
TseFI	GTSAC	6 cut(s)	1046, 1053, 2333, 2393, 2644, 2775
TseI	GCWGC	8 cut(s)	116, 216, 931, 1266, 1757, 1913, 2501, 2882
Tsp45I	GTSAC	6 cut(s)	1046, 1053, 2333, 2393, 2644, 2775
TspDTI	ATGAA	8 cut(s)	195, 1034, 1348, 1647, 1825, 2351, 2937, 2952
TspGWI	ACGGA	2 cut(s)	360, 409
TspRI	CASTG	4 cut(s)	463, 640, 823, 2396
Van91I	CCANNNNNTGG	1 cut(s)	2576
Vha464I	CTTAAG	2 cut(s)	529, 2146
VpaK11BI	GGWCC	2 cut(s)	606, 994
XagI	CCTNNNNNAGG	1 cut(s)	1131
XbaI	TCTAGA	4 cut(s)	679, 841, 2635, 2765
XceI	RCATGY	2 cut(s)	1769, 2674
XmaJI	CCTAGG	1 cut(s)	1132
XmiI	GTMKAC	4 cut(s)	2046, 2197, 2613, 2742
XmnI	GAANNNNTTC	5 cut(s)	249, 1030, 1422, 1947, 2959
ZraI	GACGTC	1 cut(s)	685

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.