Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0016887

Physical Location & Seq

Genomic Coordinates Forward (+)

46828224 .. 46831430

Gene Structure 3207 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G029100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2979 bp

ATGGTCTTCATCAAAACCATTTTCTTTCTTCTATTCCAGCATTTTGTTGTTACATCTTGTAATGCAGTTATAGGTCATCACCACAATCCTCATCACTCTTTGCTTAGAGATAAGGCTGCTCTTCTACAGTTCAAGAAGGCCATTACATATGATCCAAATTCCACTCTAGCTAATTGGAATGAAGCTACTGATGTTTGCAACTACACCGGTGTTGGGTGCAGCAAAAAGCATCATCGTGTAACTATACTCCTTCTGCATAATCGTAAACTTGTAGGGCAGCTTTCACCTATCATTTCAAATCTAACCCGCCTTCGTTACTTGGAGCTTGTAGGCAATCACTTTTATGGAACTATCCCTCCTGAACTTTCCTTACTCAGACACCTACATCATCTACGGATTGAGGGGAACAACTTTCGTGGTTCTATACCTGATTCCTTAGTCCTTCCTTCACAACTCACAGTTGTTACTCTTTTGCAAAACAATTTCTCTGGTGCAGTTCCACCTGCTCTCTTCTCCAACTGCTCTCTGTTAAGGGTGTTCGACCTTTCCAACAACTTTCTTTCAGGGAAAATTCCAAGAGAAATTGGAAATTGTCCAAACCTATGGACCCTCAATTTATACAACAATCAATTCACTGGAGAAATTCCTCTCTCTTTGACTAATACCTCACTGGTCAATTTAGATGTTGAGTTCAATCATCTTTCAGGTGAATTGCCCGTCAAACTTGTGGAAAACTTGCCTGATATTCTCTATCTTCACTTATCAAATAATAATATGGTAAGCCATGATGGAAACACCAATCTCGATCCATTCTTCACTGCCCTTGCAAATTGCATTAGTCTAGAGGAGCTTGAACTGGCGAGTATGGGACTTGGAGGAATATTACCTAGTTCCATTGGCGGACTTGGTGTCAACTTTACATACCTGTTGCTGCAAGAAAACAAGATCATTGGATCAGTTCCTTCAAATATAGGTAATTTATCCAAGCTTGTGGTCCTGAATTTGACCTCCAATCTTATGAATGGAACAATTTCAGCAAACATAAGTCAGTTGTCACACTTGGAACAGCTTTTCTTATCTCACAACTTTTTCACCAGCACGATACCAGAAGCACTTGGCCATCTTCCTCATCTTGGTCTGCTTGATCTGTCTCATAATTCGTTCTTCGGGGATATCCCAAGCGGTCTAGGAAATTTGGCCATGCTGAATTATCTGTTCCTCAACAACAACCTCCTATCTGGAACCATTCCTCCATCATTAGGACGCTGCACAGAACTGTACAAGCTTGACTTATCATTCAACAGATTGGCAGGGGCCATCCCCCCGGAATTATCAGGTTTGAATGAGATCAGAATTTTCATAAACCTCTCACACAATCACCTTGAAGGGTCTATACCGATTGAGCTCAGCAAGCTAGAAGATGTTCAAGAGATGGATCTCTCATCAAATAACCTAAGCGGGAGTATCTTTCCACAGATATCAAGCTGTATCGCACTGACGCTCATAAACTTCTCACACAATGCTTTGGAAGGGAGCCTTCCGGATTTCATAGGTGAGCTAAAGAACCTTGTGTCTCTTGATGTTTCAGATAACCACTTGTCAGGAAGGATTCCCCTAAGCCTCAACAAGAGTCTAACACTCACATATCTAAATCTTTCATTTAATGACTTCAAAGGAATGGTTCCTTCTGGTGGCATCTTTGAATCAGTGTCATATACCTCTTTCTTAGGCAATAAACATCTTTGTGGTAAAGTTGCTGCGAAACATGTTTGCCCTCGGACAAAGCATTTGTTTCGCTCCCGCATATTCATAATCATGTTTGTCATAGTCATATTCATTTCAACATCCTTATCAATCATATGCTGTGTGATTGCATTCCGCCGCATTAAGGTGCTGATTTCATCCCAGAGGGCTGCAACCGTAAAGAAACCAACACAACCTGAAGTGATTCAGAATTTCCCAAGAGTTACATACCGAGATCTGTCAGAGGCCACCGGTGGATTTGATGATCAGAGACTGATTGGCATGGGGAGCTATGGACGTGTCTACAGGGGAGTCCTTCCAGATGGGACAACCATAGCAGTCAAGGTGTTACATTTACAATCTGGAAATTCAACAAAAAGTTTTAACAGAGAATGCCAAGTCTTAAGGAGAATTAGGCACAGGAACCTTATAAGGATCATAACAGCTTGCAGCCTACCTGATTTCAAGGCTATTGTTCTTCCTTATATGGCAAATGGTAGCTTGGATAGCCGTCTCTATCCACATTCACAAGCCGGTCTAGGTTCAGGCTCTTCTGATCTGAGTCTCATTCAGAGGGTCAATATTTGTAGCGACATCGCGGAAGGGATGGCCTATCTTCATCATTACTCTCCGGTCAGAGTTATACACTGTGACCTGAAACCAAGCAATGTTCTTCTCAACGATGGCATGACTGCTTTAGTTTCTGATTTTGGGATTGCAAGATTAGTGATAGCCGGAGGAGGAGTGGGAAATGCAGGTCTTGAGAACATGGGAAACTCTACTGCAAGTTTATTATGTGGATCTATTGGATACATAGCACCAGAGTATGGGTTTGGATCGAACACATCTACAAAAGGCGATGTTTACAGCTTCGGTGTTCTTGTTCTCGAGATGGTGACAAGAAAAAGGCCGACAGATGACATGTTTGTTGGGGGACTAAGCCTGCACAGCTGGGTAAAGAACCATTATCATGGAAGGGTTGACAAAGTGCTCGACTCTTCCTTGGTGAGAGCTTCTAGAGATCAGCCACCTGAGATGAAAAAAATGTGGGATGTTGCCATAGGAGAAATGATAGAGTTGGGTATTCTCTGCACTCAGGAGTCCCCTTCCACTAGGCCTACAATGCTCGATGCTGCAGATGATTTGGATCGGCTGAAGAGATATCTTGGTGGGGATACTACTGCAACATTTGCCTCTTCATTAGGAATTTCTTCGTCTACCCTAGATGACGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05169 map04010 map04064 map04620 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05169

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8 Pkinase

Protein Analysis

992

Amino Acids

108.76

Weight (kDa)

6.96

Isoelectric Point (pI)

32.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	36 - 74	1.3e-11	Leucine rich repeat N-terminal domain
LRR_8	PF13855	152 - 211	6.5e-08	Leucine rich repeat
LRR_8	PF13855	329 - 387	7.5e-07	Leucine rich repeat
LRR_14	PF23598	332 - 576	7.4e-11	Leucine-rich repeat region
Pkinase	PF00069	669 - 888	3.9e-37	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	672 - 957	3.2e-36	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016887)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g28380 FvH4_6g28380
malus_domestica	MD17G1226200.v1.1
prunus_persica	Prupe.3G102400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0132491
rosa_laevigata	RLG00000019260
rosa_multiflora	Rmu_sc0005538.1_g000005
rosa_roxburghii	Rroxscaffold_2G00111910
rosa_rugosa	Rorug02G0304800
rosa_samantha	Rh2AG357600 Rh2BG364200 Rh2CG341300 Rh2DG380900
rosa_wichuraiana	Rw2G029100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2174
AarI	CACCTGC	1 cut(s)	511
Acc36I	ACCTGC	2 cut(s)	511, 2489
AccB7I	CCANNNNNTGG	1 cut(s)	2570
AccI	GTMKAC	2 cut(s)	2046, 2960
AccII	CGCG	1 cut(s)	2342
AccIII	TCCGGA	1 cut(s)	1540
AciI	CCGC	8 cut(s)	307, 900, 1182, 1458, 1801, 1879, 1882, 2342
AclWI	GGATC	8 cut(s)	146, 800, 961, 1443, 2186, 2551, 2587, 2898
AcoI	YGGCCR	2 cut(s)	1117, 1197
AcsI	RAATTY	9 cut(s)	157, 570, 642, 1000, 1192, 1353, 1954, 2110, 2949
AcuI	CTGAAG	2 cut(s)	1962, 2918
AfaI	GTAC	1 cut(s)	1280
AfiI	CCNNNNNNNGG	6 cut(s)	213, 1133, 1259, 1691, 1888, 2570
AflII	CTTAAG	1 cut(s)	2146
AflIII	ACRYGT	3 cut(s)	1765, 2041, 2664
AgeI	ACCGGT	2 cut(s)	206, 1994
AhdI	GACNNNNNGTC	1 cut(s)	908
AjiI	CACGTC	1 cut(s)	2042
AloI	GAACNNNNNNTCC	4 cut(s)	340, 372, 1234, 1266
Alw21I	GWGCWC	2 cut(s)	1407, 2736
Alw26I	GTCTC	5 cut(s)	1155, 1578, 2008, 2261, 2312
AlwI	GGATC	8 cut(s)	146, 800, 961, 1443, 2186, 2551, 2587, 2898
AlwNI	CAGNNNCTG	1 cut(s)	2017
Ama87I	CYCGRG	1 cut(s)	2630
Aor13HI	TCCGGA	1 cut(s)	1540
AoxI	GGCC	8 cut(s)	138, 1117, 1197, 1314, 1989, 2352, 2651, 2858
ApeKI	GCWGC	9 cut(s)	116, 219, 277, 931, 1266, 1757, 1913, 2193, 2876
ApoI	RAATTY	9 cut(s)	157, 570, 642, 1000, 1192, 1353, 1954, 2110, 2949
ArsI	GACNNNNNNTTYG	2 cut(s)	1771, 1803
AsiGI	ACCGGT	2 cut(s)	206, 1994
Asp700I	GAANNNNTTC	4 cut(s)	1030, 1422, 1947, 2953
AspS9I	GGNCC	3 cut(s)	606, 994, 1314
AsuC2I	CCSGG	1 cut(s)	1325
AsuHPI	GGTGA	8 cut(s)	71, 276, 719, 1084, 1370, 1565, 2650, 2761
AvaI	CYCGRG	1 cut(s)	2630
AvaII	GGWCC	2 cut(s)	606, 994
BalI	TGGCCA	2 cut(s)	1119, 1199
BanII	GRGCYC	1 cut(s)	1407
BarI	GAAGNNNNNNTAC	2 cut(s)	1377, 1409
Bbv12I	GWGCWC	2 cut(s)	1407, 2736
BbvI	GCAGC	9 cut(s)	103, 231, 289, 918, 1253, 1744, 1900, 2205, 2863
BccI	CCATC	9 cut(s)	782, 1128, 1261, 1325, 1426, 2060, 2344, 2420, 2629
BceAI	ACGGC	1 cut(s)	2238
BcgI	CGANNNNNNTGC	2 cut(s)	1775, 1809
BciVI	GTATCC	2 cut(s)	2546, 2911
BclI	TGATCA	1 cut(s)	2008
BcnI	CCSGG	1 cut(s)	1325
BcoDI	GTCTC	5 cut(s)	1155, 1578, 2008, 2261, 2312
BfmI	CTRYAG	3 cut(s)	125, 2047, 2877
BfrI	CTTAAG	1 cut(s)	2146
BfuAI	ACCTGC	2 cut(s)	511, 2489
BfuI	GTATCC	2 cut(s)	2546, 2911
BglII	AGATCT	1 cut(s)	1978
BlpI	GCTNAGC	1 cut(s)	1406
Bme1390I	CCNGG	1 cut(s)	1325
Bme18I	GGWCC	2 cut(s)	606, 994
BmeRI	GACNNNNNGTC	1 cut(s)	908
BmeT110I	CYCGRG	1 cut(s)	2630
BmgBI	CACGTC	1 cut(s)	2042
BmgT120I	GGNCC	3 cut(s)	606, 994, 1314
BmiI	GGNNCC	6 cut(s)	608, 1243, 1315, 1535, 1683, 2168
BmrFI	CCNGG	1 cut(s)	1325
BmsI	GCATC	3 cut(s)	238, 1704, 2863
BpmI	CTGGAG	1 cut(s)	657
Bpu10I	CCTNAGC	2 cut(s)	1454, 1616
Bpu1102I	GCTNAGC	1 cut(s)	1406
BpuEI	CTTGAG	1 cut(s)	2525
BpuMI	CCSGG	1 cut(s)	1325
BsaBI	GATNNNNATC	1 cut(s)	2889
BsaJI	CCNNGG	3 cut(s)	1323, 1775, 2745
BsaWI	WCCGGW	4 cut(s)	206, 1540, 1994, 2374
BsaXI	ACNNNNNCTCC	6 cut(s)	340, 370, 1234, 1264, 2472, 2502
Bsc4I	CCNNNNNNNGG	6 cut(s)	213, 1133, 1259, 1691, 1888, 2570
Bse118I	RCCGGY	3 cut(s)	206, 1994, 2276
Bse1I	ACTGG	3 cut(s)	640, 675, 861
Bse3DI	GCAATG	1 cut(s)	2416
Bse8I	GATNNNNATC	1 cut(s)	2889
BseAI	TCCGGA	1 cut(s)	1540
BseDI	CCNNGG	3 cut(s)	1323, 1775, 2745
BseGI	GGATG	5 cut(s)	1317, 1844, 1901, 2355, 2800
BseJI	GATNNNNATC	1 cut(s)	2889
BseLI	CCNNNNNNNGG	6 cut(s)	213, 1133, 1259, 1691, 1888, 2570
BseMI	GCAATG	1 cut(s)	2416
BseMII	CTCAG	5 cut(s)	388, 1420, 2294, 2766, 2852
BseNI	ACTGG	3 cut(s)	640, 675, 861
BseRI	GAGGAG	3 cut(s)	860, 2496, 2499
BseXI	GCAGC	9 cut(s)	103, 231, 289, 918, 1253, 1744, 1900, 2205, 2863
BseYI	CCCAGC	1 cut(s)	2694
BsgI	GTGCAG	5 cut(s)	238, 513, 1252, 2672, 2818
Bsh1236I	CGCG	1 cut(s)	2342
BshFI	GGCC	8 cut(s)	140, 1119, 1199, 1316, 1991, 2354, 2653, 2860
BshTI	ACCGGT	2 cut(s)	206, 1994
BsiHKAI	GWGCWC	2 cut(s)	1407, 2736
BsiHKCI	CYCGRG	1 cut(s)	2630
BsiSI	CCGG	7 cut(s)	207, 1325, 1541, 1995, 2277, 2375, 2478
BslFI	GGGAC	4 cut(s)	882, 2083, 2691, 2830
BslI	CCNNNNNNNGG	6 cut(s)	213, 1133, 1259, 1691, 1888, 2570
BsmAI	GTCTC	5 cut(s)	1155, 1578, 2008, 2261, 2312
BsmBI	CGTCTC	1 cut(s)	2261
BsmFI	GGGAC	4 cut(s)	882, 2083, 2691, 2830
BsmI	GAATGC	2 cut(s)	1874, 2141
BsnI	GGCC	8 cut(s)	140, 1119, 1199, 1316, 1991, 2354, 2653, 2860
BsoBI	CYCGRG	1 cut(s)	2630
Bsp1286I	GDGCHC	2 cut(s)	1407, 2736
Bsp13I	TCCGGA	1 cut(s)	1540
Bsp1407I	TGTACA	1 cut(s)	1278
Bsp1720I	GCTNAGC	1 cut(s)	1406
BspACI	CCGC	8 cut(s)	307, 900, 1182, 1458, 1801, 1879, 1882, 2342
BspANI	GGCC	8 cut(s)	140, 1119, 1199, 1316, 1991, 2354, 2653, 2860
BspCNI	CTCAG	5 cut(s)	387, 1419, 2295, 2767, 2851
BspEI	TCCGGA	1 cut(s)	1540
BspFNI	CGCG	1 cut(s)	2342
BspLI	GGNNCC	6 cut(s)	608, 1243, 1315, 1535, 1683, 2168
BspMAI	CTGCAG	1 cut(s)	2881
BspMI	ACCTGC	2 cut(s)	511, 2489
BspPI	GGATC	8 cut(s)	146, 800, 961, 1443, 2186, 2551, 2587, 2898
BspQI	GCTCTTC	2 cut(s)	126, 2299
BspTI	CTTAAG	1 cut(s)	2146
BsrDI	GCAATG	1 cut(s)	2416
BsrFI	RCCGGY	3 cut(s)	206, 1994, 2276
BsrGI	TGTACA	1 cut(s)	1278
BsrI	ACTGG	3 cut(s)	640, 675, 861
BssAI	RCCGGY	3 cut(s)	206, 1994, 2276
BssECI	CCNNGG	3 cut(s)	1323, 1775, 2745
BssT1I	CCWWGG	1 cut(s)	2745
Bst4CI	ACNGT	5 cut(s)	129, 460, 1278, 1921, 2393
Bst6I	CTCTTC	6 cut(s)	126, 515, 2299, 2746, 2894, 2944
BstAFI	CTTAAG	1 cut(s)	2146
BstAPI	GCANNNNNTGC	1 cut(s)	2933
BstAUI	TGTACA	1 cut(s)	1278
BstC8I	GCNNGC	3 cut(s)	1412, 2191, 2687
BstF5I	GGATG	5 cut(s)	1317, 1844, 1901, 2355, 2800
BstFNI	CGCG	1 cut(s)	2342
BstMAI	GTCTC	5 cut(s)	1155, 1578, 2008, 2261, 2312
BstMWI	GCNNNNNNNGC	6 cut(s)	1411, 2031, 2250, 2691, 2866, 2933
BstNSI	RCATGY	2 cut(s)	1769, 2668
BstSCI	CCNGG	1 cut(s)	1323
BstSFI	CTRYAG	3 cut(s)	125, 2047, 2877
BstUI	CGCG	1 cut(s)	2342
BstV1I	GCAGC	9 cut(s)	103, 231, 289, 918, 1253, 1744, 1900, 2205, 2863
BstX2I	RGATCY	3 cut(s)	1435, 1978, 2543
BstXI	CCANNNNNNTGG	3 cut(s)	603, 991, 2714
BstYI	RGATCY	3 cut(s)	1435, 1978, 2543
BsuI	GTATCC	2 cut(s)	2546, 2911
BsuRI	GGCC	8 cut(s)	140, 1119, 1199, 1316, 1991, 2354, 2653, 2860
BtgZI	GCGATG	2 cut(s)	2323, 2616
BtrI	CACGTC	1 cut(s)	2042
BtsCI	GGATG	5 cut(s)	1317, 1844, 1901, 2355, 2800
BtsI	GCAGTG	1 cut(s)	816
BtsIMutI	CAGTG	6 cut(s)	633, 668, 816, 1493, 1713, 2389
BveI	ACCTGC	2 cut(s)	511, 2489
Cac8I	GCNNGC	3 cut(s)	1412, 2191, 2687
CaiI	CAGNNNCTG	1 cut(s)	2017
Cfr10I	RCCGGY	3 cut(s)	206, 1994, 2276
Cfr13I	GGNCC	3 cut(s)	606, 994, 1314
CseI	GACGC	2 cut(s)	1272, 1507
Csp6I	GTAC	1 cut(s)	1279
CspAI	ACCGGT	2 cut(s)	206, 1994
CspCI	CAANNNNNGTGG	2 cut(s)	397, 432
CviAII	CATG	9 cut(s)	785, 1201, 1766, 1816, 2026, 2431, 2512, 2665, 2714
CviQI	GTAC	1 cut(s)	1279
DriI	GACNNNNNGTC	1 cut(s)	908
EaeI	YGGCCR	2 cut(s)	1117, 1197
Eam1104I	CTCTTC	6 cut(s)	126, 515, 2299, 2746, 2894, 2944
Eam1105I	GACNNNNNGTC	1 cut(s)	908
EarI	CTCTTC	6 cut(s)	126, 515, 2299, 2746, 2894, 2944
EciI	GGCGGA	2 cut(s)	915, 1868
Ecl136II	GAGCTC	1 cut(s)	1405
Eco130I	CCWWGG	1 cut(s)	2745
Eco147I	AGGCCT	1 cut(s)	2860
Eco24I	GRGCYC	1 cut(s)	1407
Eco32I	GATATC	3 cut(s)	1174, 1479, 2906
Eco47I	GGWCC	2 cut(s)	606, 994
Eco53kI	GAGCTC	1 cut(s)	1405
Eco57I	CTGAAG	2 cut(s)	1962, 2918
Eco88I	CYCGRG	1 cut(s)	2630
EcoICRI	GAGCTC	1 cut(s)	1405
EcoRV	GATATC	3 cut(s)	1174, 1479, 2906
EcoT14I	CCWWGG	1 cut(s)	2745
EcoT38I	GRGCYC	1 cut(s)	1407
ErhI	CCWWGG	1 cut(s)	2745
Esp3I	CGTCTC	1 cut(s)	2261
FaeI	CATG	9 cut(s)	788, 1204, 1769, 1819, 2029, 2434, 2515, 2668, 2717
FalI	AAGNNNNNCTT	4 cut(s)	1274, 1306, 1521, 1553
FaqI	GGGAC	4 cut(s)	882, 2083, 2691, 2830
FatI	CATG	9 cut(s)	784, 1200, 1765, 1815, 2025, 2430, 2511, 2664, 2713
FauI	CCCGC	3 cut(s)	314, 1451, 1808
FauNDI	CATATG	2 cut(s)	148, 1859
FbaI	TGATCA	1 cut(s)	2008
FblI	GTMKAC	2 cut(s)	2046, 2960
FokI	GGATG	5 cut(s)	1304, 1831, 1888, 2362, 2807
FriOI	GRGCYC	1 cut(s)	1407
GsaI	CCCAGC	1 cut(s)	2698
GsuI	CTGGAG	1 cut(s)	657
HaeIII	GGCC	8 cut(s)	140, 1119, 1199, 1316, 1991, 2354, 2653, 2860
HapII	CCGG	7 cut(s)	207, 1325, 1541, 1995, 2277, 2375, 2478
HgaI	GACGC	2 cut(s)	1272, 1507
Hin1II	CATG	9 cut(s)	788, 1204, 1769, 1819, 2029, 2434, 2515, 2668, 2717
HincII	GTYRAC	2 cut(s)	913, 2725
HindII	GTYRAC	2 cut(s)	913, 2725
HindIII	AAGCTT	2 cut(s)	986, 1283
HinfI	GANTC	9 cut(s)	431, 1609, 1630, 1703, 1948, 2055, 2305, 2738, 2843
HpaII	CCGG	7 cut(s)	207, 1325, 1541, 1995, 2277, 2375, 2478
HphI	GGTGA	8 cut(s)	71, 276, 719, 1084, 1370, 1565, 2650, 2761
Hpy166II	GTNNAC	6 cut(s)	266, 913, 2047, 2608, 2725, 2961
Hpy8I	GTNNAC	6 cut(s)	266, 913, 2047, 2608, 2725, 2961
HpyCH4III	ACNGT	5 cut(s)	129, 460, 1278, 1921, 2393
HpyCH4IV	ACGT	1 cut(s)	2041
HpyF10VI	GCNNNNNNNGC	6 cut(s)	1411, 2031, 2250, 2691, 2866, 2933
HpySE526I	ACGT	1 cut(s)	2041
Hsp92II	CATG	9 cut(s)	788, 1204, 1769, 1819, 2029, 2434, 2515, 2668, 2717
Kpn2I	TCCGGA	1 cut(s)	1540
Ksp22I	TGATCA	1 cut(s)	2008
LguI	GCTCTTC	2 cut(s)	126, 2299
LmnI	GCTCC	5 cut(s)	322, 847, 1533, 1802, 2031
Lsp1109I	GCAGC	9 cut(s)	103, 231, 289, 918, 1253, 1744, 1900, 2205, 2863
LweI	GCATC	3 cut(s)	238, 1704, 2863
MaeII	ACGT	1 cut(s)	2041
MaeIII	GTNAC	9 cut(s)	49, 238, 314, 463, 1053, 1966, 2091, 2393, 2638
MflI	RGATCY	3 cut(s)	1435, 1978, 2543
MhlI	GDGCHC	2 cut(s)	1407, 2736
MlsI	TGGCCA	2 cut(s)	1119, 1199
MluNI	TGGCCA	2 cut(s)	1119, 1199
MlyI	GAGTC	5 cut(s)	1639, 2064, 2314, 2732, 2852
MmeI	TCCRAC	2 cut(s)	540, 573
Mox20I	TGGCCA	2 cut(s)	1119, 1199
MroI	TCCGGA	1 cut(s)	1540
MroXI	GAANNNNTTC	4 cut(s)	1030, 1422, 1947, 2953
MscI	TGGCCA	2 cut(s)	1119, 1199
MseI	TTAA	5 cut(s)	530, 1662, 1887, 2127, 2147
MslI	CAYNNNNRTG	6 cut(s)	234, 342, 1743, 1814, 1889, 2712
Msp20I	TGGCCA	2 cut(s)	1119, 1199
MspA1I	CMGCKG	1 cut(s)	2694
MspCI	CTTAAG	1 cut(s)	2146
MspI	CCGG	7 cut(s)	207, 1325, 1541, 1995, 2277, 2375, 2478
MspR9I	CCNGG	1 cut(s)	1325
Mva1269I	GAATGC	2 cut(s)	1874, 2141
MvnI	CGCG	1 cut(s)	2342
MwoI	GCNNNNNNNGC	6 cut(s)	1411, 2031, 2250, 2691, 2866, 2933
NciI	CCSGG	1 cut(s)	1325
NdeI	CATATG	2 cut(s)	148, 1859
NlaIII	CATG	9 cut(s)	788, 1204, 1769, 1819, 2029, 2434, 2515, 2668, 2717
NlaIV	GGNNCC	6 cut(s)	608, 1243, 1315, 1535, 1683, 2168
NmuCI	GTSAC	3 cut(s)	1053, 2393, 2638
NspI	RCATGY	2 cut(s)	1769, 2668
PaeR7I	CTCGAG	1 cut(s)	2630
PaqCI	CACCTGC	1 cut(s)	511
PceI	AGGCCT	1 cut(s)	2860
PciI	ACATGT	2 cut(s)	1765, 2664
PciSI	GCTCTTC	2 cut(s)	126, 2299
PctI	GAATGC	2 cut(s)	1874, 2141
PdmI	GAANNNNTTC	4 cut(s)	1030, 1422, 1947, 2953
PfeI	GAWTC	4 cut(s)	431, 1609, 1703, 1948
PflMI	CCANNNNNTGG	1 cut(s)	2570
PinAI	ACCGGT	2 cut(s)	206, 1994
PleI	GAGTC	5 cut(s)	1638, 2063, 2313, 2732, 2851
PpsI	GAGTC	5 cut(s)	1638, 2063, 2313, 2732, 2851
PscI	ACATGT	2 cut(s)	1765, 2664
PsiI	TTATAA	1 cut(s)	2174
Psp124BI	GAGCTC	1 cut(s)	1407
PspFI	CCCAGC	1 cut(s)	2694
PspN4I	GGNNCC	6 cut(s)	608, 1243, 1315, 1535, 1683, 2168
PspPI	GGNCC	3 cut(s)	606, 994, 1314
PsrI	GAACNNNNNNTAC	2 cut(s)	354, 386
PstI	CTGCAG	1 cut(s)	2881
PstNI	CAGNNNCTG	1 cut(s)	2017
PsuI	RGATCY	3 cut(s)	1435, 1978, 2543
PvuII	CAGCTG	1 cut(s)	2694
RsaI	GTAC	1 cut(s)	1280
RsaNI	GTAC	1 cut(s)	1279
RseI	CAYNNNNRTG	6 cut(s)	234, 342, 1743, 1814, 1889, 2712
SacI	GAGCTC	1 cut(s)	1407
SapI	GCTCTTC	2 cut(s)	126, 2299
SaqAI	TTAA	5 cut(s)	530, 1662, 1887, 2127, 2147
Sau96I	GGNCC	3 cut(s)	606, 994, 1314
SchI	GAGTC	5 cut(s)	1639, 2064, 2314, 2732, 2852
ScrFI	CCNGG	1 cut(s)	1325
SduI	GDGCHC	2 cut(s)	1407, 2736
SfaNI	GCATC	3 cut(s)	238, 1704, 2863
SfcI	CTRYAG	3 cut(s)	125, 2047, 2877
Sfr274I	CTCGAG	1 cut(s)	2630
SgrAI	CRCCGGYG	2 cut(s)	206, 1994
SinI	GGWCC	2 cut(s)	606, 994
SlaI	CTCGAG	1 cut(s)	2630
SmiMI	CAYNNNNRTG	6 cut(s)	234, 342, 1743, 1814, 1889, 2712
SmlI	CTYRAG	3 cut(s)	2146, 2504, 2630
SmoI	CTYRAG	3 cut(s)	2146, 2504, 2630
SseBI	AGGCCT	1 cut(s)	2860
SsiI	CCGC	8 cut(s)	307, 900, 1182, 1458, 1801, 1879, 1882, 2342
SspI	AATATT	2 cut(s)	882, 2326
SstI	GAGCTC	1 cut(s)	1407
StuI	AGGCCT	1 cut(s)	2860
StyD4I	CCNGG	1 cut(s)	1323
StyI	CCWWGG	1 cut(s)	2745
TaaI	ACNGT	5 cut(s)	129, 460, 1278, 1921, 2393
TaiI	ACGT	1 cut(s)	2044
TaqI	TCGA	6 cut(s)	540, 804, 2582, 2631, 2736, 2871
TatI	WGTACW	1 cut(s)	1278
TauI	GCSGC	1 cut(s)	1884
TfiI	GAWTC	4 cut(s)	431, 1609, 1703, 1948
Tru1I	TTAA	5 cut(s)	530, 1662, 1887, 2127, 2147
Tru9I	TTAA	5 cut(s)	530, 1662, 1887, 2127, 2147
TscAI	CASTG	6 cut(s)	640, 675, 823, 1500, 1713, 2396
TseFI	GTSAC	3 cut(s)	1053, 2393, 2638
TseI	GCWGC	9 cut(s)	116, 219, 277, 931, 1266, 1757, 1913, 2193, 2876
Tsp45I	GTSAC	3 cut(s)	1053, 2393, 2638
TspGWI	ACGGA	1 cut(s)	409
TspRI	CASTG	6 cut(s)	640, 675, 823, 1500, 1713, 2396
Van91I	CCANNNNNTGG	1 cut(s)	2570
Vha464I	CTTAAG	1 cut(s)	2146
VpaK11BI	GGWCC	2 cut(s)	606, 994
XapI	RAATTY	9 cut(s)	157, 570, 642, 1000, 1192, 1353, 1954, 2110, 2949
XbaI	TCTAGA	2 cut(s)	841, 2759
XceI	RCATGY	2 cut(s)	1769, 2668
XhoI	CTCGAG	1 cut(s)	2630
XmiI	GTMKAC	2 cut(s)	2046, 2960
XmnI	GAANNNNTTC	4 cut(s)	1030, 1422, 1947, 2953

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.