FvH4_6g29640

Protein TOO MANY

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Reverse (-)
22886746 .. 22888253
1508 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g29640.t1

Sequence Viewer

Length: 1338 bp
ATGTCAATCATTTCCTCACCTCCATCACTACTCTTGCTGCTCTTTCTCATGTGTTTTTGGGCGTTGGCCACGCCTTTCACGGTGATAATGTCTGATTCAGACCCGCCCAACGCCCTGGTAGATGGGCCGCAGACCGGGTTCTCCATCAACAAAGACGGGGCTCGAACCGATGCCCGTGAGCAAGAAGCCGTCTACGACATCATGCGCGCCACAGGCAATGATTGGGCTACGGACATCCCAGACGTGTGTCGAGGTCGTTGGCATGGAATCGAGTGCATGCCGGACAAGGACGATGTCTTCCATGTCGTTTCACTCTCATTTGGGGCCCTGTCCGACGACACCGCCTTCCCGACCTGCGACCCAACCCGGTCTCACATTTCAGAATCCATCACGAGGCTCCCTTACCTCCGGACCCTTTTTTTCTACCGTTGTTTTAGTTACAACCCGCAACCGATCCCGTCATTTCTCGGCCGATTGGGTCCCACTCTCCAAACCCTGGTGCTTAGAGATAATGGACATGTGGGTCCCATACCTGTTGAGCTGGGAAATCTCACCCGTTTAAAGGTTCTCGACCTCCACAAAAACAATCTCAACAGTTCAATTCCGGTCTCACTAAACCGTATCACCGGTCTAAGGTCGTTAGACTTGAGCAGCAACTCTCTAACCGGTTCAATACCCAATTTCAGCTTCCCTATCTTGAGCATCCTTGACATGAGCCAAAATCTTCTAGCCAGTTCAATCCCCTCTTCAATCGGATCATGCCTTGCTCTCCTCAAGATGGATTTGAGCCACAACCGGCTCACCGGATTGTTACCCGACTCCATGGGCGGCCTAAAAGACCTCATGCTCATGGATTTGAGCTACAATCGCCTCAAGGGTCCTCTCCCGATGTGGTTTGGAACCCTGGTGTCTCTTCAAACTCTAAACCTCAAAGGAAACCCTATGGGACCAACGCAAATTCCAAGTGAAGGGTTTGAAGGTATGAAGGGGTTAATGATTCTAATCTTATCAAATATGAATCTACATGGTCCTATACCTCCATCGTTAGGTAACTTGCCAAGCCTTCGTGTGCTTCATCTTGACGGGAACCACCTGAATGGTTCAATCCCAAATAGCTTCCGAGAGCTTAAGAGCGTCGCTGAGTTGAGATTAAACGACAATGGACTAGTTGGGTCAATTCCATTTGGGAGAGAAATGGTTTGGAGGATGAGAAGGAAGCTTAGGCTTTACAACAATTCAGGGCTTTGTTATAATGCTAATAGTGGCTTTGAAGACAATTTGGATTCTTCTTCCAGTTCTGGGATTGGTCCATGCGAACCACCGAGACCGAGGCCATGA

Protein Analysis

446

Amino Acids

48.8

Weight (kDa)

6.5

Isoelectric Point (pI)

42.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 161 - 221 3.5e-07 Leucine rich repeat
LRR_14 PF23598 211 - 392 1e-09 Leucine-rich repeat region
LRR_8 PF13855 259 - 314 3.3e-11 Leucine rich repeat
LRR_8 PF13855 318 - 365 2.4e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015057)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1251
AasI GACNNNNNNGTC 1 cut(s) 522
Acc36I ACCTGC 1 cut(s) 362
AccB7I CCANNNNNTGG 1 cut(s) 496
AccI GTMKAC 1 cut(s) 192
AccII CGCG 1 cut(s) 207
AccIII TCCGGA 1 cut(s) 408
AciI CCGC 5 cut(s) 104, 128, 342, 446, 828
AclWI GGATC 2 cut(s) 448, 763
AcoI YGGCCR 2 cut(s) 66, 469
AcsI RAATTY 1 cut(s) 957
AfiI CCNNNNNNNGG 9 cut(s) 134, 393, 496, 562, 633, 778, 968, 1046, 1299
AflII CTTAAG 1 cut(s) 1127
AflIII ACRYGT 2 cut(s) 243, 517
AgeI ACCGGT 2 cut(s) 626, 665
AgsI TTSAA 8 cut(s) 600, 672, 738, 750, 917, 977, 1104, 1271
AhlI ACTAGT 1 cut(s) 1165
AjiI CACGTC 1 cut(s) 244
AjnI CCWGG 3 cut(s) 114, 495, 903
AjuI GAANNNNNNNTTGG 2 cut(s) 671, 703
AluBI AGCT 6 cut(s) 541, 687, 861, 1116, 1126, 1219
AluI AGCT 6 cut(s) 541, 687, 861, 1116, 1126, 1219
Alw26I GTCTC 4 cut(s) 375, 613, 915, 1318
AlwI GGATC 2 cut(s) 448, 763
Aor13HI TCCGGA 1 cut(s) 408
AoxI GGCC 6 cut(s) 66, 125, 324, 469, 829, 1331
ApaI GGGCCC 1 cut(s) 328
ApeKI GCWGC 2 cut(s) 37, 651
ApoI RAATTY 1 cut(s) 957
AsiGI ACCGGT 2 cut(s) 626, 665
AspLEI GCGC 2 cut(s) 207, 209
AsuC2I CCSGG 2 cut(s) 136, 367
AsuHPI GGTGA 5 cut(s) 9, 94, 544, 616, 793
AvaII GGWCC 7 cut(s) 411, 479, 524, 878, 947, 1028, 1307
BaeGI GKGCMC 1 cut(s) 328
BalI TGGCCA 1 cut(s) 68
BanII GRGCYC 2 cut(s) 163, 328
BauI CACGAG 1 cut(s) 391
BbsI GAAGAC 2 cut(s) 289, 1278
BbvI GCAGC 2 cut(s) 24, 663
BccI CCATC 6 cut(s) 31, 116, 152, 395, 772, 1048
BceAI ACGGC 1 cut(s) 173
BciT130I CCWGG 3 cut(s) 116, 497, 905
BcnI CCSGG 2 cut(s) 136, 367
BcoDI GTCTC 4 cut(s) 375, 613, 915, 1318
BcuI ACTAGT 1 cut(s) 1165
BfaI CTAG 2 cut(s) 728, 1166
BfrI CTTAAG 1 cut(s) 1127
BfuAI ACCTGC 1 cut(s) 362
BisI GCNGC 4 cut(s) 38, 128, 652, 829
BlsI GCNGC 4 cut(s) 39, 129, 653, 830
Bme1390I CCNGG 5 cut(s) 116, 136, 367, 497, 905
Bme18I GGWCC 7 cut(s) 411, 479, 524, 878, 947, 1028, 1307
BmgBI CACGTC 1 cut(s) 244
BmrFI CCNGG 5 cut(s) 116, 136, 367, 497, 905
BmsI GCATC 2 cut(s) 160, 711
BoxI GACNNNNGTC 1 cut(s) 246
BpiI GAAGAC 2 cut(s) 289, 1278
Bpu10I CCTNAGC 1 cut(s) 1220
BpuEI CTTGAG 4 cut(s) 667, 718, 758, 857
BpuMI CCSGG 2 cut(s) 136, 367
BsaBI GATNNNNATC 1 cut(s) 1001
BsaI GGTCTC 3 cut(s) 375, 613, 1318
BsaJI CCNNGG 5 cut(s) 114, 495, 822, 903, 1328
BsaWI WCCGGW 5 cut(s) 408, 604, 626, 665, 803
Bsc4I CCNNNNNNNGG 9 cut(s) 134, 393, 496, 562, 633, 778, 968, 1046, 1299
Bse118I RCCGGY 3 cut(s) 626, 665, 795
Bse1I ACTGG 2 cut(s) 732, 1293
Bse3DI GCAATG 1 cut(s) 223
Bse8I GATNNNNATC 1 cut(s) 1001
BseAI TCCGGA 1 cut(s) 408
BseBI CCWGG 3 cut(s) 116, 497, 905
BseDI CCNNGG 5 cut(s) 114, 495, 822, 903, 1328
BseGI GGATG 3 cut(s) 234, 702, 1212
BseJI GATNNNNATC 1 cut(s) 1001
BseLI CCNNNNNNNGG 9 cut(s) 134, 393, 496, 562, 633, 778, 968, 1046, 1299
BseMI GCAATG 1 cut(s) 223
BseMII CTCAG 1 cut(s) 1131
BseNI ACTGG 2 cut(s) 732, 1293
BsePI GCGCGC 1 cut(s) 205
BseRI GAGGAG 1 cut(s) 761
BseSI GKGCMC 1 cut(s) 328
BseX3I CGGCCG 1 cut(s) 469
BseXI GCAGC 2 cut(s) 24, 663
BseYI CCCAGC 1 cut(s) 541
Bsh1236I CGCG 1 cut(s) 207
Bsh1285I CGRYCG 1 cut(s) 472
BshFI GGCC 6 cut(s) 68, 127, 326, 471, 831, 1333
BshTI ACCGGT 2 cut(s) 626, 665
BsiEI CGRYCG 1 cut(s) 472
BsiSI CCGG 9 cut(s) 135, 281, 367, 409, 605, 627, 666, 796, 804
BslFI GGGAC 3 cut(s) 465, 510, 960
BslI CCNNNNNNNGG 9 cut(s) 134, 393, 496, 562, 633, 778, 968, 1046, 1299
BsmAI GTCTC 4 cut(s) 375, 613, 915, 1318
BsmFI GGGAC 3 cut(s) 465, 510, 960
BsnI GGCC 6 cut(s) 68, 127, 326, 471, 831, 1333
Bso31I GGTCTC 3 cut(s) 375, 613, 1318
Bsp120I GGGCCC 1 cut(s) 324
Bsp1286I GDGCHC 2 cut(s) 163, 328
Bsp13I TCCGGA 1 cut(s) 408
Bsp143I GATC 2 cut(s) 453, 755
Bsp19I CCATGG 1 cut(s) 822
BspACI CCGC 5 cut(s) 104, 128, 342, 446, 828
BspANI GGCC 6 cut(s) 68, 127, 326, 471, 831, 1333
BspCNI CTCAG 1 cut(s) 1132
BspEI TCCGGA 1 cut(s) 408
BspFNI CGCG 1 cut(s) 207
BspMI ACCTGC 1 cut(s) 362
BspPI GGATC 2 cut(s) 448, 763
BspTI CTTAAG 1 cut(s) 1127
BspTNI GGTCTC 3 cut(s) 375, 613, 1318
BsrDI GCAATG 1 cut(s) 223
BsrFI RCCGGY 3 cut(s) 626, 665, 795
BsrI ACTGG 2 cut(s) 732, 1293
BssAI RCCGGY 3 cut(s) 626, 665, 795
BssECI CCNNGG 5 cut(s) 114, 495, 822, 903, 1328
BssHII GCGCGC 1 cut(s) 205
BssMI GATC 2 cut(s) 453, 755
BssSI CACGAG 1 cut(s) 391
BssT1I CCWWGG 1 cut(s) 822
Bst2BI CACGAG 1 cut(s) 391
Bst2UI CCWGG 3 cut(s) 116, 497, 905
Bst4CI ACNGT 4 cut(s) 82, 428, 596, 620
Bst6I CTCTTC 2 cut(s) 751, 918
BstAFI CTTAAG 1 cut(s) 1127
BstC8I GCNNGC 2 cut(s) 207, 278
BstDEI CTNAG 4 cut(s) 503, 632, 1140, 1220
BstDSI CCRYGG 1 cut(s) 822
BstF5I GGATG 3 cut(s) 234, 702, 1212
BstFNI CGCG 1 cut(s) 207
BstHHI GCGC 2 cut(s) 207, 209
BstKTI GATC 2 cut(s) 456, 758
BstMAI GTCTC 4 cut(s) 375, 613, 915, 1318
BstMBI GATC 2 cut(s) 453, 755
BstMCI CGRYCG 1 cut(s) 472
BstMWI GCNNNNNNNGC 2 cut(s) 213, 867
BstNI CCWGG 3 cut(s) 116, 497, 905
BstNSI RCATGY 2 cut(s) 280, 521
BstPAI GACNNNNGTC 1 cut(s) 246
BstSCI CCNGG 5 cut(s) 114, 134, 365, 495, 903
BstSLI GKGCMC 1 cut(s) 328
BstUI CGCG 1 cut(s) 207
BstV1I GCAGC 2 cut(s) 24, 663
BstV2I GAAGAC 2 cut(s) 289, 1278
BstXI CCANNNNNNTGG 2 cut(s) 115, 1097
BstZI CGGCCG 1 cut(s) 469
BsuRI GGCC 6 cut(s) 68, 127, 326, 471, 831, 1333
BtgI CCRYGG 1 cut(s) 822
BtrI CACGTC 1 cut(s) 244
BtsCI GGATG 3 cut(s) 234, 702, 1212
BveI ACCTGC 1 cut(s) 362
Cac8I GCNNGC 2 cut(s) 207, 278
CfoI GCGC 2 cut(s) 207, 209
Cfr10I RCCGGY 3 cut(s) 626, 665, 795
CseI GACGC 1 cut(s) 1123
CspAI ACCGGT 2 cut(s) 626, 665
DdeI CTNAG 4 cut(s) 503, 632, 1140, 1220
DpnI GATC 2 cut(s) 455, 757
DpnII GATC 2 cut(s) 453, 755
DraI TTTAAA 1 cut(s) 561
DrdI GACNNNNNNGTC 1 cut(s) 522
DseDI GACNNNNNNGTC 1 cut(s) 522
EaeI YGGCCR 2 cut(s) 66, 469
EagI CGGCCG 1 cut(s) 469
Eam1104I CTCTTC 2 cut(s) 751, 918
EarI CTCTTC 2 cut(s) 751, 918
EclXI CGGCCG 1 cut(s) 469
Eco130I CCWWGG 1 cut(s) 822
Eco24I GRGCYC 2 cut(s) 163, 328
Eco31I GGTCTC 3 cut(s) 375, 613, 1318
Eco47I GGWCC 7 cut(s) 411, 479, 524, 878, 947, 1028, 1307
Eco52I CGGCCG 1 cut(s) 469
EcoO109I RGGNCCY 5 cut(s) 324, 325, 479, 524, 878
EcoRII CCWGG 3 cut(s) 114, 495, 903
EcoT14I CCWWGG 1 cut(s) 822
EcoT38I GRGCYC 2 cut(s) 163, 328
ErhI CCWWGG 1 cut(s) 822
FaqI GGGAC 3 cut(s) 465, 510, 960
FauI CCCGC 2 cut(s) 111, 453
FblI GTMKAC 1 cut(s) 192
Fnu4HI GCNGC 4 cut(s) 38, 128, 652, 829
FokI GGATG 3 cut(s) 221, 689, 1219
FriOI GRGCYC 2 cut(s) 163, 328
Fsp4HI GCNGC 4 cut(s) 38, 128, 652, 829
FspBI CTAG 2 cut(s) 728, 1166
GlaI GCGC 2 cut(s) 206, 208
GluI GCNGC 4 cut(s) 38, 128, 652, 829
GsaI CCCAGC 1 cut(s) 545
HaeIII GGCC 6 cut(s) 68, 127, 326, 471, 831, 1333
HapII CCGG 9 cut(s) 135, 281, 367, 409, 605, 627, 666, 796, 804
HgaI GACGC 1 cut(s) 1123
HhaI GCGC 2 cut(s) 207, 209
Hin6I GCGC 2 cut(s) 205, 207
HinP1I GCGC 2 cut(s) 205, 207
HindIII AAGCTT 1 cut(s) 1217
HinfI GANTC 7 cut(s) 95, 267, 383, 818, 997, 1018, 1283
HpaII CCGG 9 cut(s) 135, 281, 367, 409, 605, 627, 666, 796, 804
HphI GGTGA 5 cut(s) 9, 94, 544, 616, 793
Hpy166II GTNNAC 1 cut(s) 193
Hpy188I TCNGA 6 cut(s) 94, 100, 334, 382, 755, 1121
Hpy188III TCNNGA 8 cut(s) 349, 391, 409, 569, 697, 775, 886, 1079
Hpy8I GTNNAC 1 cut(s) 193
Hpy99I CGWCG 2 cut(s) 338, 1139
HpyAV CCTTC 6 cut(s) 355, 962, 971, 979, 1073, 1206
HpyCH4III ACNGT 4 cut(s) 82, 428, 596, 620
HpyCH4IV ACGT 1 cut(s) 243
HpyCH4V TGCA 1 cut(s) 276
HpyF10VI GCNNNNNNNGC 2 cut(s) 213, 867
HpyF3I CTNAG 4 cut(s) 503, 632, 1140, 1220
HpySE526I ACGT 1 cut(s) 243
HspAI GCGC 2 cut(s) 205, 207
KflI GGGWCCC 2 cut(s) 479, 524
Kpn2I TCCGGA 1 cut(s) 408
Kzo9I GATC 2 cut(s) 453, 755
LmnI GCTCC 1 cut(s) 402
Lsp1109I GCAGC 2 cut(s) 24, 663
LweI GCATC 2 cut(s) 160, 711
MaeI CTAG 2 cut(s) 728, 1166
MaeII ACGT 1 cut(s) 243
MaeIII GTNAC 3 cut(s) 437, 810, 1049
MalI GATC 2 cut(s) 455, 757
MboI GATC 2 cut(s) 453, 755
MboII GAAGA 7 cut(s) 289, 716, 738, 905, 1278, 1281, 1283
MhlI GDGCHC 2 cut(s) 163, 328
MlsI TGGCCA 1 cut(s) 68
MluCI AATT 6 cut(s) 600, 679, 957, 1176, 1234, 1276
MluNI TGGCCA 1 cut(s) 68
MlyI GAGTC 1 cut(s) 812
MmeI TCCRAC 1 cut(s) 357
Mox20I TGGCCA 1 cut(s) 68
MroI TCCGGA 1 cut(s) 408
MscI TGGCCA 1 cut(s) 68
MseI TTAA 4 cut(s) 560, 992, 1128, 1151
MslI CAYNNNNRTG 2 cut(s) 848, 1095
Msp20I TGGCCA 1 cut(s) 68
MspCI CTTAAG 1 cut(s) 1127
MspI CCGG 9 cut(s) 135, 281, 367, 409, 605, 627, 666, 796, 804
MspR9I CCNGG 5 cut(s) 116, 136, 367, 497, 905
MvaI CCWGG 3 cut(s) 116, 497, 905
MvnI CGCG 1 cut(s) 207
MwoI GCNNNNNNNGC 2 cut(s) 213, 867
NciI CCSGG 2 cut(s) 136, 367
NcoI CCATGG 1 cut(s) 822
NdeII GATC 2 cut(s) 453, 755
NmeAIII GCCGAG 1 cut(s) 447
NspI RCATGY 2 cut(s) 280, 521
PaeI GCATGC 1 cut(s) 280
PauI GCGCGC 1 cut(s) 205
PciI ACATGT 1 cut(s) 517
PfeI GAWTC 6 cut(s) 95, 267, 383, 997, 1018, 1283
PflFI GACNNNGTC 1 cut(s) 293
PflMI CCANNNNNTGG 1 cut(s) 496
PinAI ACCGGT 2 cut(s) 626, 665
PkrI GCNGC 4 cut(s) 39, 129, 653, 830
PleI GAGTC 1 cut(s) 812
PpsI GAGTC 1 cut(s) 812
PpuMI RGGWCCY 3 cut(s) 479, 524, 878
PscI ACATGT 1 cut(s) 517
PshAI GACNNNNGTC 1 cut(s) 246
PsiI TTATAA 1 cut(s) 1251
Psp5II RGGWCCY 3 cut(s) 479, 524, 878
Psp6I CCWGG 3 cut(s) 114, 495, 903
PspFI CCCAGC 1 cut(s) 541
PspGI CCWGG 3 cut(s) 114, 495, 903
PspOMI GGGCCC 1 cut(s) 324
PspPPI RGGWCCY 3 cut(s) 479, 524, 878
PsyI GACNNNGTC 1 cut(s) 293
PteI GCGCGC 1 cut(s) 205
RseI CAYNNNNRTG 2 cut(s) 848, 1095
SaqAI TTAA 4 cut(s) 560, 992, 1128, 1151
SatI GCNGC 4 cut(s) 38, 128, 652, 829
Sau3AI GATC 2 cut(s) 453, 755
SchI GAGTC 1 cut(s) 812
ScrFI CCNGG 5 cut(s) 116, 136, 367, 497, 905
SduI GDGCHC 2 cut(s) 163, 328
SfaNI GCATC 2 cut(s) 160, 711
SinI GGWCC 7 cut(s) 411, 479, 524, 878, 947, 1028, 1307
SmiMI CAYNNNNRTG 2 cut(s) 848, 1095
SmlI CTYRAG 5 cut(s) 646, 697, 773, 872, 1127
SmoI CTYRAG 5 cut(s) 646, 697, 773, 872, 1127
SpeI ACTAGT 1 cut(s) 1165
SphI GCATGC 1 cut(s) 280
Sse9I AATT 6 cut(s) 600, 679, 957, 1176, 1234, 1276
SsiI CCGC 5 cut(s) 104, 128, 342, 446, 828
SspMI CTAG 2 cut(s) 728, 1166
StyD4I CCNGG 5 cut(s) 114, 134, 365, 495, 903
StyI CCWWGG 1 cut(s) 822
TaaI ACNGT 4 cut(s) 82, 428, 596, 620
TaiI ACGT 1 cut(s) 246
TaqI TCGA 4 cut(s) 163, 250, 270, 570
TasI AATT 6 cut(s) 600, 679, 957, 1176, 1234, 1276
TauI GCSGC 2 cut(s) 130, 831
TfiI GAWTC 6 cut(s) 95, 267, 383, 997, 1018, 1283
Tru1I TTAA 4 cut(s) 560, 992, 1128, 1151
Tru9I TTAA 4 cut(s) 560, 992, 1128, 1151
TseI GCWGC 2 cut(s) 37, 651
TspDTI ATGAA 3 cut(s) 998, 1031, 1064
TspGWI ACGGA 1 cut(s) 245
Tth111I GACNNNGTC 1 cut(s) 293
Van91I CCANNNNNTGG 1 cut(s) 496
Vha464I CTTAAG 1 cut(s) 1127
VpaK11BI GGWCC 7 cut(s) 411, 479, 524, 878, 947, 1028, 1307
XapI RAATTY 1 cut(s) 957
XceI RCATGY 2 cut(s) 280, 521
XmiI GTMKAC 1 cut(s) 192
XspI CTAG 2 cut(s) 728, 1166
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.