RLG00000019451

Protein TOO MANY

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
52149503 .. 52150840
1338 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000019451

Sequence Viewer

Length: 1338 bp
ATGTCACTCATTTCCTCACCGCCACCATTACCCTTGCTGCTCTTTCTCATGTCTTTTTGGACGCTGGCCACGCCTTTCACGGTAATTATGTCCGATTCAGGTGAGTCCAACGCTCTTGTAGACGGGCCGCAGACCGGGTTCTCCATCAACAAAGACGGGGCTCGAACAGATGCCCGTGAGCAAGAAGCGGTCTACGACATCATGCGTGCCACGGGCAACGATTGGGCCACTGACATCTCGGACGTGTGTCGTGGCCGTTGGCACGGGATTGAGTGCATGCCCGACAAGAACGATGTTTTCCACGTCGTCTCCCTCTCCTTTGGAGCCTTGTCAGACGACACTGCCTTCCCGACTTGCGACCCGACCCGGTCACATATTTCGCCGTCCATCACTAGGCTCCATTACCTCCGGACCCTCTTTTTCTACCGTTGTTTCAGTTACAACCCCCAGCCAATCCCGTCATTTCTCGGCCAACTGGGTCCCACTCTGCAAACACTAGTGCTTAGAGACAACGGGCACGTGGGTCCCATACCTATTGAGCTGGGCAATCTCACCCGTTTAAAGGTTCTCGACCTCCACAAAAACAATCTGAACGGTTCAATTCCGGTCTCACTAAACCGTATCACCGGTCTAAGGTCGTTAGACTTGAGCAGTAATGCTCTAACCGGTTCAATACCCAATTTCAGCTTCCCTATCTTGAGCATCCTTGACATGAGCCAAAATCTTCTAGCCGGCTCAATCCCCTCCCGAATCGGAGCCTGCCTTTCTCTTCTGAAGATGGATTTGAGCCACAACCGGCTCACCGGATCGATACCCGACTCCATCGGCGGCCTAAAAGACCTCATGCTCATGGATTTGAGCTACAATCGCCTTAAGGGTCCTCTCCCAATGTGGTTTGGAACCTTGGCGTCTCTTCAAACTCTGAACCTCAAAGGCAACCCTATGGGACCGACACAAATTCCAAGTGAAGGATTTGAAGGTATGAAGGGTTTAATGATTCTGATCTTATCAAACATGAATCTACATGGTTCTATACCTTCATCGATAGGTCACTTGCCAAGCCTTCGTGTTCTTCATCTTGATGGCAACCACTTGAATGGTTCAATCCCAAATAGCTTTCGAGAGCTTAAGAGCGTTGGTGAGTTGAGATTAAACGACAATGGACTAGTTGGGTCAATTCCATTTGGGAGAGAAATGGTTTGGAGAATGGGAAGGAAGCTTAGGCTTTACAATAATTCAGGGCTTTGTTATAATGCTAATAGCGGTTTTGAAGACAACATGGATTCGTCTTCCAGTTTTGGGATTGGTCCATGCGACCCACTGAGACCGAGGCCATGA

Protein Analysis

446

Amino Acids

48.65

Weight (kDa)

6.83

Isoelectric Point (pI)

42.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 161 - 221 5.2e-07 Leucine rich repeat
LRR_14 PF23598 211 - 382 1.3e-10 Leucine-rich repeat region
LRR_8 PF13855 257 - 314 2.2e-10 Leucine rich repeat
LRR_8 PF13855 318 - 365 1.3e-07 Leucine rich repeat
LRR_8 PF13855 330 - 389 7.4e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0015057)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1251
AccI GTMKAC 2 cut(s) 120, 192
AccIII TCCGGA 1 cut(s) 408
AciI CCGC 5 cut(s) 20, 128, 188, 828, 1263
AclWI GGATC 1 cut(s) 814
AcoI YGGCCR 3 cut(s) 66, 253, 469
AcsI RAATTY 1 cut(s) 957
AcuI CTGAAG 1 cut(s) 794
AcvI CACGTG 1 cut(s) 520
AcyI GRCGYC 1 cut(s) 908
AfiI CCNNNNNNNGG 6 cut(s) 134, 393, 562, 633, 968, 1299
AflII CTTAAG 2 cut(s) 872, 1127
AflIII ACRYGT 1 cut(s) 243
AgeI ACCGGT 2 cut(s) 626, 665
AgsI TTSAA 7 cut(s) 600, 672, 917, 977, 1096, 1104, 1271
AhlI ACTAGT 2 cut(s) 496, 1165
AjiI CACGTC 2 cut(s) 244, 304
AjuI GAANNNNNNNTTGG 2 cut(s) 671, 703
AluBI AGCT 6 cut(s) 541, 687, 861, 1116, 1126, 1219
AluI AGCT 6 cut(s) 541, 687, 861, 1116, 1126, 1219
Alw26I GTCTC 5 cut(s) 313, 501, 613, 915, 1318
AlwI GGATC 1 cut(s) 814
Aor13HI TCCGGA 1 cut(s) 408
AoxI GGCC 7 cut(s) 66, 125, 225, 253, 469, 829, 1331
ApeKI GCWGC 1 cut(s) 37
ApoI RAATTY 1 cut(s) 957
AsiGI ACCGGT 2 cut(s) 626, 665
AspS9I GGNCC 8 cut(s) 125, 225, 411, 479, 524, 878, 947, 1307
AsuC2I CCSGG 2 cut(s) 136, 367
AsuHPI GGTGA 6 cut(s) 9, 113, 544, 616, 793, 1151
AvaII GGWCC 6 cut(s) 411, 479, 524, 878, 947, 1307
BaeGI GKGCMC 1 cut(s) 519
BalI TGGCCA 1 cut(s) 68
BanII GRGCYC 1 cut(s) 163
BbrPI CACGTG 1 cut(s) 520
BbsI GAAGAC 2 cut(s) 1278, 1281
BbvI GCAGC 1 cut(s) 24
BccI CCATC 5 cut(s) 152, 395, 772, 830, 1076
BceAI ACGGC 2 cut(s) 240, 367
BcnI CCSGG 2 cut(s) 136, 367
BcoDI GTCTC 5 cut(s) 313, 501, 613, 915, 1318
BcuI ACTAGT 2 cut(s) 496, 1165
BfaI CTAG 4 cut(s) 393, 497, 728, 1166
BfrI CTTAAG 2 cut(s) 872, 1127
BisI GCNGC 3 cut(s) 38, 128, 829
BlsI GCNGC 3 cut(s) 39, 129, 830
Bme1390I CCNGG 2 cut(s) 136, 367
Bme18I GGWCC 6 cut(s) 411, 479, 524, 878, 947, 1307
BmgBI CACGTC 2 cut(s) 244, 304
BmgT120I GGNCC 8 cut(s) 125, 225, 411, 479, 524, 878, 947, 1307
BmrFI CCNGG 2 cut(s) 136, 367
BmrI ACTGGG 1 cut(s) 485
BmsI GCATC 2 cut(s) 160, 711
BmuI ACTGGG 1 cut(s) 485
BoxI GACNNNNGTC 1 cut(s) 246
BpiI GAAGAC 2 cut(s) 1278, 1281
Bpu10I CCTNAGC 1 cut(s) 1220
BpuEI CTTGAG 2 cut(s) 667, 718
BpuMI CCSGG 2 cut(s) 136, 367
Bsa29I ATCGAT 2 cut(s) 809, 1043
BsaAI YACGTR 1 cut(s) 520
BsaBI GATNNNNATC 1 cut(s) 1001
BsaHI GRCGYC 1 cut(s) 908
BsaI GGTCTC 2 cut(s) 613, 1318
BsaJI CCNNGG 3 cut(s) 210, 903, 1328
BsaWI WCCGGW 5 cut(s) 408, 604, 626, 665, 803
BsaXI ACNNNNNCTCC 2 cut(s) 293, 323
Bsc4I CCNNNNNNNGG 6 cut(s) 134, 393, 562, 633, 968, 1299
Bse118I RCCGGY 4 cut(s) 626, 665, 731, 795
Bse1I ACTGG 2 cut(s) 480, 1293
Bse8I GATNNNNATC 1 cut(s) 1001
BseAI TCCGGA 1 cut(s) 408
BseCI ATCGAT 2 cut(s) 809, 1043
BseDI CCNNGG 3 cut(s) 210, 903, 1328
BseGI GGATG 1 cut(s) 702
BseJI GATNNNNATC 1 cut(s) 1001
BseLI CCNNNNNNNGG 6 cut(s) 134, 393, 562, 633, 968, 1299
BseMII CTCAG 1 cut(s) 1313
BseNI ACTGG 2 cut(s) 480, 1293
BseSI GKGCMC 1 cut(s) 519
BseXI GCAGC 1 cut(s) 24
BseYI CCCAGC 2 cut(s) 447, 541
BshFI GGCC 7 cut(s) 68, 127, 227, 255, 471, 831, 1333
BshTI ACCGGT 2 cut(s) 626, 665
BshVI ATCGAT 2 cut(s) 809, 1043
BsiSI CCGG 9 cut(s) 135, 367, 409, 605, 627, 666, 732, 796, 804
BslFI GGGAC 3 cut(s) 465, 510, 960
BslI CCNNNNNNNGG 6 cut(s) 134, 393, 562, 633, 968, 1299
BsmAI GTCTC 5 cut(s) 313, 501, 613, 915, 1318
BsmBI CGTCTC 2 cut(s) 313, 915
BsmFI GGGAC 3 cut(s) 465, 510, 960
BsnI GGCC 7 cut(s) 68, 127, 227, 255, 471, 831, 1333
Bso31I GGTCTC 2 cut(s) 613, 1318
Bsp1286I GDGCHC 2 cut(s) 163, 519
Bsp13I TCCGGA 1 cut(s) 408
Bsp143I GATC 2 cut(s) 806, 1002
BspACI CCGC 5 cut(s) 20, 128, 188, 828, 1263
BspANI GGCC 7 cut(s) 68, 127, 227, 255, 471, 831, 1333
BspCNI CTCAG 1 cut(s) 1314
BspDI ATCGAT 2 cut(s) 809, 1043
BspEI TCCGGA 1 cut(s) 408
BspPI GGATC 1 cut(s) 814
BspTI CTTAAG 2 cut(s) 872, 1127
BspTNI GGTCTC 2 cut(s) 613, 1318
BsrFI RCCGGY 4 cut(s) 626, 665, 731, 795
BsrI ACTGG 2 cut(s) 480, 1293
BssAI RCCGGY 4 cut(s) 626, 665, 731, 795
BssECI CCNNGG 3 cut(s) 210, 903, 1328
BssMI GATC 2 cut(s) 806, 1002
BssNI GRCGYC 1 cut(s) 908
BssT1I CCWWGG 1 cut(s) 903
Bst4CI ACNGT 4 cut(s) 82, 428, 596, 620
Bst6I CTCTTC 2 cut(s) 774, 918
BstACI GRCGYC 1 cut(s) 908
BstAFI CTTAAG 2 cut(s) 872, 1127
BstBAI YACGTR 1 cut(s) 520
BstC8I GCNNGC 5 cut(s) 66, 207, 278, 733, 760
BstDEI CTNAG 4 cut(s) 503, 632, 1220, 1322
BstDSI CCRYGG 1 cut(s) 210
BstF5I GGATG 1 cut(s) 702
BstKTI GATC 2 cut(s) 809, 1005
BstMAI GTCTC 5 cut(s) 313, 501, 613, 915, 1318
BstMBI GATC 2 cut(s) 806, 1002
BstMWI GCNNNNNNNGC 2 cut(s) 70, 867
BstNSI RCATGY 1 cut(s) 280
BstPAI GACNNNNGTC 1 cut(s) 246
BstSCI CCNGG 2 cut(s) 134, 365
BstSLI GKGCMC 1 cut(s) 519
BstV1I GCAGC 1 cut(s) 24
BstV2I GAAGAC 2 cut(s) 1278, 1281
BstXI CCANNNNNNTGG 1 cut(s) 1097
Bsu15I ATCGAT 2 cut(s) 809, 1043
BsuRI GGCC 7 cut(s) 68, 127, 227, 255, 471, 831, 1333
BsuTUI ATCGAT 2 cut(s) 809, 1043
BtgI CCRYGG 1 cut(s) 210
BtrI CACGTC 2 cut(s) 244, 304
BtsCI GGATG 1 cut(s) 702
BtsI GCAGTG 1 cut(s) 339
BtsIMutI CAGTG 3 cut(s) 228, 339, 1319
Cac8I GCNNGC 5 cut(s) 66, 207, 278, 733, 760
Cfr10I RCCGGY 4 cut(s) 626, 665, 731, 795
Cfr13I GGNCC 8 cut(s) 125, 225, 411, 479, 524, 878, 947, 1307
ClaI ATCGAT 2 cut(s) 809, 1043
CseI GACGC 2 cut(s) 70, 897
CspAI ACCGGT 2 cut(s) 626, 665
DdeI CTNAG 4 cut(s) 503, 632, 1220, 1322
DpnI GATC 2 cut(s) 808, 1004
DpnII GATC 2 cut(s) 806, 1002
DraI TTTAAA 1 cut(s) 561
EaeI YGGCCR 3 cut(s) 66, 253, 469
Eam1104I CTCTTC 2 cut(s) 774, 918
EarI CTCTTC 2 cut(s) 774, 918
Eco130I CCWWGG 1 cut(s) 903
Eco24I GRGCYC 1 cut(s) 163
Eco31I GGTCTC 2 cut(s) 613, 1318
Eco47I GGWCC 6 cut(s) 411, 479, 524, 878, 947, 1307
Eco57I CTGAAG 1 cut(s) 794
Eco72I CACGTG 1 cut(s) 520
EcoO109I RGGNCCY 3 cut(s) 479, 524, 878
EcoT14I CCWWGG 1 cut(s) 903
EcoT38I GRGCYC 1 cut(s) 163
ErhI CCWWGG 1 cut(s) 903
Esp3I CGTCTC 2 cut(s) 313, 915
FaqI GGGAC 3 cut(s) 465, 510, 960
FblI GTMKAC 2 cut(s) 120, 192
Fnu4HI GCNGC 3 cut(s) 38, 128, 829
FokI GGATG 1 cut(s) 689
FriOI GRGCYC 1 cut(s) 163
Fsp4HI GCNGC 3 cut(s) 38, 128, 829
FspBI CTAG 4 cut(s) 393, 497, 728, 1166
GluI GCNGC 3 cut(s) 38, 128, 829
GsaI CCCAGC 2 cut(s) 451, 545
HaeIII GGCC 7 cut(s) 68, 127, 227, 255, 471, 831, 1333
HapII CCGG 9 cut(s) 135, 367, 409, 605, 627, 666, 732, 796, 804
HgaI GACGC 2 cut(s) 70, 897
Hin1I GRCGYC 1 cut(s) 908
HindIII AAGCTT 1 cut(s) 1217
HinfI GANTC 7 cut(s) 95, 104, 750, 818, 997, 1018, 1283
HpaII CCGG 9 cut(s) 135, 367, 409, 605, 627, 666, 732, 796, 804
HphI GGTGA 6 cut(s) 9, 113, 544, 616, 793, 1151
Hpy166II GTNNAC 2 cut(s) 121, 193
Hpy188I TCNGA 8 cut(s) 94, 241, 334, 591, 755, 774, 924, 1002
Hpy188III TCNNGA 7 cut(s) 349, 409, 569, 697, 747, 1079, 1121
Hpy8I GTNNAC 2 cut(s) 121, 193
Hpy99I CGWCG 1 cut(s) 308
HpyAV CCTTC 7 cut(s) 355, 962, 971, 979, 1047, 1073, 1206
HpyCH4III ACNGT 4 cut(s) 82, 428, 596, 620
HpyCH4IV ACGT 3 cut(s) 243, 303, 519
HpyCH4V TGCA 2 cut(s) 276, 490
HpyF10VI GCNNNNNNNGC 2 cut(s) 70, 867
HpyF3I CTNAG 4 cut(s) 503, 632, 1220, 1322
HpySE526I ACGT 3 cut(s) 243, 303, 519
Hsp92I GRCGYC 1 cut(s) 908
KflI GGGWCCC 2 cut(s) 479, 524
Kpn2I TCCGGA 1 cut(s) 408
KroI GCCGGC 1 cut(s) 731
KroNI GCCGGC 1 cut(s) 733
Kzo9I GATC 2 cut(s) 806, 1002
LmnI GCTCC 3 cut(s) 323, 402, 755
Lsp1109I GCAGC 1 cut(s) 24
LweI GCATC 2 cut(s) 160, 711
MaeI CTAG 4 cut(s) 393, 497, 728, 1166
MaeII ACGT 3 cut(s) 243, 303, 519
MaeIII GTNAC 4 cut(s) 3, 369, 437, 1049
MalI GATC 2 cut(s) 808, 1004
MboI GATC 2 cut(s) 806, 1002
MboII GAAGA 7 cut(s) 716, 761, 787, 905, 1064, 1281, 1283
MhlI GDGCHC 2 cut(s) 163, 519
MlsI TGGCCA 1 cut(s) 68
MluCI AATT 6 cut(s) 84, 600, 679, 957, 1176, 1234
MluNI TGGCCA 1 cut(s) 68
MlyI GAGTC 2 cut(s) 113, 812
MmeI TCCRAC 1 cut(s) 132
Mox20I TGGCCA 1 cut(s) 68
MroI TCCGGA 1 cut(s) 408
MroNI GCCGGC 1 cut(s) 731
MscI TGGCCA 1 cut(s) 68
MseI TTAA 5 cut(s) 560, 873, 992, 1128, 1151
MslI CAYNNNNRTG 3 cut(s) 848, 1080, 1095
Msp20I TGGCCA 1 cut(s) 68
MspCI CTTAAG 2 cut(s) 872, 1127
MspI CCGG 9 cut(s) 135, 367, 409, 605, 627, 666, 732, 796, 804
MspR9I CCNGG 2 cut(s) 136, 367
MwoI GCNNNNNNNGC 2 cut(s) 70, 867
NaeI GCCGGC 1 cut(s) 733
NciI CCSGG 2 cut(s) 136, 367
NdeII GATC 2 cut(s) 806, 1002
NgoMIV GCCGGC 1 cut(s) 731
NmeAIII GCCGAG 1 cut(s) 447
NmuCI GTSAC 3 cut(s) 3, 369, 1049
NspI RCATGY 1 cut(s) 280
PaeI GCATGC 1 cut(s) 280
PdiI GCCGGC 1 cut(s) 733
PfeI GAWTC 5 cut(s) 95, 750, 997, 1018, 1283
PflFI GACNNNGTC 1 cut(s) 367
PinAI ACCGGT 2 cut(s) 626, 665
PkrI GCNGC 3 cut(s) 39, 129, 830
PleI GAGTC 2 cut(s) 112, 812
PmaCI CACGTG 1 cut(s) 520
PmlI CACGTG 1 cut(s) 520
PpsI GAGTC 2 cut(s) 112, 812
Ppu21I YACGTR 1 cut(s) 520
PpuMI RGGWCCY 3 cut(s) 479, 524, 878
PshAI GACNNNNGTC 1 cut(s) 246
PsiI TTATAA 1 cut(s) 1251
Psp5II RGGWCCY 3 cut(s) 479, 524, 878
PspCI CACGTG 1 cut(s) 520
PspFI CCCAGC 2 cut(s) 447, 541
PspPI GGNCC 8 cut(s) 125, 225, 411, 479, 524, 878, 947, 1307
PspPPI RGGWCCY 3 cut(s) 479, 524, 878
PsyI GACNNNGTC 1 cut(s) 367
RseI CAYNNNNRTG 3 cut(s) 848, 1080, 1095
SaqAI TTAA 5 cut(s) 560, 873, 992, 1128, 1151
SatI GCNGC 3 cut(s) 38, 128, 829
Sau3AI GATC 2 cut(s) 806, 1002
Sau96I GGNCC 8 cut(s) 125, 225, 411, 479, 524, 878, 947, 1307
SchI GAGTC 2 cut(s) 113, 812
ScrFI CCNGG 2 cut(s) 136, 367
SduI GDGCHC 2 cut(s) 163, 519
SfaNI GCATC 2 cut(s) 160, 711
SinI GGWCC 6 cut(s) 411, 479, 524, 878, 947, 1307
SmiMI CAYNNNNRTG 3 cut(s) 848, 1080, 1095
SmlI CTYRAG 4 cut(s) 646, 697, 872, 1127
SmoI CTYRAG 4 cut(s) 646, 697, 872, 1127
SpeI ACTAGT 2 cut(s) 496, 1165
SphI GCATGC 1 cut(s) 280
Sse9I AATT 6 cut(s) 84, 600, 679, 957, 1176, 1234
SsiI CCGC 5 cut(s) 20, 128, 188, 828, 1263
SspMI CTAG 4 cut(s) 393, 497, 728, 1166
StyD4I CCNGG 2 cut(s) 134, 365
StyI CCWWGG 1 cut(s) 903
TaaI ACNGT 4 cut(s) 82, 428, 596, 620
TaiI ACGT 3 cut(s) 246, 306, 522
TaqI TCGA 5 cut(s) 163, 570, 809, 1043, 1120
TaqII GACCGA 1 cut(s) 964
TasI AATT 6 cut(s) 84, 600, 679, 957, 1176, 1234
TauI GCSGC 2 cut(s) 130, 831
TfiI GAWTC 5 cut(s) 95, 750, 997, 1018, 1283
Tru1I TTAA 5 cut(s) 560, 873, 992, 1128, 1151
Tru9I TTAA 5 cut(s) 560, 873, 992, 1128, 1151
TscAI CASTG 3 cut(s) 235, 346, 1326
TseFI GTSAC 3 cut(s) 3, 369, 1049
TseI GCWGC 1 cut(s) 37
Tsp45I GTSAC 3 cut(s) 3, 369, 1049
TspDTI ATGAA 4 cut(s) 998, 1029, 1031, 1064
TspRI CASTG 3 cut(s) 235, 346, 1326
Tth111I GACNNNGTC 1 cut(s) 367
Vha464I CTTAAG 2 cut(s) 872, 1127
VpaK11BI GGWCC 6 cut(s) 411, 479, 524, 878, 947, 1307
XapI RAATTY 1 cut(s) 957
XceI RCATGY 1 cut(s) 280
XmiI GTMKAC 2 cut(s) 120, 192
XspI CTAG 4 cut(s) 393, 497, 728, 1166
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.