FvH4_6g31480

No description available

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Reverse (-)
24596948 .. 24598211
1264 bp
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UTR
Exon/CDS
Intron
FvH4_6g31480.t1

Sequence Viewer

Length: 204 bp
ATGAAGAAAGGATTGCATCCTCAGATGCAATGGGTGTCTTATGTGACACAGAGCGGGAGATTGATGCTTGTTATGATGACCAAGATACACCATGTCGGTAAAGTCTACCACTTAAAGGCGAAGCGCCAAATGGCTGAGAACCTCGGGCAGGTTGCCAAGTTTAGGCAACGTTATGAGAAGGCAACACCTACTGTGAAAGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

68

Amino Acids

7.88

Weight (kDa)

10.46

Isoelectric Point (pI)

16.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 139
AccBSI CCGCTC 1 cut(s) 54
AccI GTMKAC 1 cut(s) 105
AciI CCGC 1 cut(s) 54
AclI AACGTT 1 cut(s) 169
AfiI CCNNNNNNNGG 3 cut(s) 115, 148, 162
Ama87I CYCGRG 1 cut(s) 143
AspLEI GCGC 1 cut(s) 126
AvaI CYCGRG 1 cut(s) 143
BfoI RGCGCY 1 cut(s) 127
BfuAI ACCTGC 1 cut(s) 139
BmeT110I CYCGRG 1 cut(s) 143
BmsI GCATC 3 cut(s) 15, 25, 54
BsaJI CCNNGG 1 cut(s) 142
Bsc4I CCNNNNNNNGG 3 cut(s) 115, 148, 162
Bse3DI GCAATG 1 cut(s) 35
BseDI CCNNGG 1 cut(s) 142
BseGI GGATG 1 cut(s) 16
BseLI CCNNNNNNNGG 3 cut(s) 115, 148, 162
BseMI GCAATG 1 cut(s) 35
BseMII CTCAG 2 cut(s) 35, 126
BsiHKCI CYCGRG 1 cut(s) 143
BslI CCNNNNNNNGG 3 cut(s) 115, 148, 162
BsoBI CYCGRG 1 cut(s) 143
BspACI CCGC 1 cut(s) 54
BspCNI CTCAG 2 cut(s) 34, 127
BspMI ACCTGC 1 cut(s) 139
BsrBI CCGCTC 1 cut(s) 54
BsrDI GCAATG 1 cut(s) 35
BssECI CCNNGG 1 cut(s) 142
Bst4CI ACNGT 1 cut(s) 193
BstDEI CTNAG 2 cut(s) 21, 135
BstENI CCTNNNNNAGG 1 cut(s) 146
BstF5I GGATG 1 cut(s) 16
BstH2I RGCGCY 1 cut(s) 127
BstHHI GCGC 1 cut(s) 126
BtsCI GGATG 1 cut(s) 16
BveI ACCTGC 1 cut(s) 139
CfoI GCGC 1 cut(s) 126
CviAII CATG 1 cut(s) 92
CviJI RGCY 1 cut(s) 134
CviKI_1 RGCY 1 cut(s) 134
DdeI CTNAG 2 cut(s) 21, 135
Eco88I CYCGRG 1 cut(s) 143
EcoNI CCTNNNNNAGG 1 cut(s) 146
FaeI CATG 1 cut(s) 95
FaiI YATR 4 cut(s) 42, 74, 93, 174
FatI CATG 1 cut(s) 91
FauI CCCGC 1 cut(s) 47
FblI GTMKAC 1 cut(s) 105
FokI GGATG 1 cut(s) 3
GlaI GCGC 1 cut(s) 125
HaeII RGCGCY 1 cut(s) 127
HhaI GCGC 1 cut(s) 126
Hin1II CATG 1 cut(s) 95
Hin6I GCGC 1 cut(s) 124
HinP1I GCGC 1 cut(s) 124
Hpy166II GTNNAC 1 cut(s) 106
Hpy188I TCNGA 1 cut(s) 24
Hpy8I GTNNAC 1 cut(s) 106
HpyAV CCTTC 1 cut(s) 172
HpyCH4III ACNGT 1 cut(s) 193
HpyCH4IV ACGT 1 cut(s) 169
HpyCH4V TGCA 2 cut(s) 16, 28
HpyF3I CTNAG 2 cut(s) 21, 135
HpySE526I ACGT 1 cut(s) 169
Hsp92II CATG 1 cut(s) 95
HspAI GCGC 1 cut(s) 124
LpnPI CCDG 1 cut(s) 134
LweI GCATC 3 cut(s) 15, 25, 54
MaeII ACGT 1 cut(s) 169
MaeIII GTNAC 1 cut(s) 43
MbiI CCGCTC 1 cut(s) 54
MboII GAAGA 1 cut(s) 16
MnlI CCTC 2 cut(s) 30, 152
MseI TTAA 1 cut(s) 113
NlaIII CATG 1 cut(s) 95
NmuCI GTSAC 1 cut(s) 43
Psp1406I AACGTT 1 cut(s) 169
SaqAI TTAA 1 cut(s) 113
SetI ASST 4 cut(s) 144, 153, 172, 190
SfaNI GCATC 3 cut(s) 15, 25, 54
SgeI CNNG 8 cut(s) 67, 80, 94, 104, 155, 157, 161, 169
SsiI CCGC 1 cut(s) 54
TaaI ACNGT 1 cut(s) 193
TaiI ACGT 1 cut(s) 172
Tru1I TTAA 1 cut(s) 113
Tru9I TTAA 1 cut(s) 113
TseFI GTSAC 1 cut(s) 43
Tsp45I GTSAC 1 cut(s) 43
TspDTI ATGAA 1 cut(s) 17
XagI CCTNNNNNAGG 1 cut(s) 146
XmiI GTMKAC 1 cut(s) 105
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.