FvH4_6g32930

At1g51745-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0005767
Physical Location & Seq
Reverse (-)
25971229 .. 25976451
5223 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g32930.t1

Sequence Viewer

Length: 2097 bp
ATGGGGAGTTCCGGCGAGTCCGGTAATAACGGCATTGATGCGTCAGTGGGGTCCTTGGTTTGGGTCCGGCGCCGAAACGGGTCGTGGTGGCCGGGCAGGATTGTGGGGCTGGACGAGTTGTCTGAGGATTTTGTGGTTTCGCCTAGGTCCGGGACTCCGGTGAAGCTTCTCGGCCGGGATGACGCAAGCGTGGACTGGTATAATCTTGAAAAATCCAAGAGGGTGAAACCTTTTCGCTGTGGGGAGTATGACGAATGCATTGCAAAAGCAAAGGCTGCTGCAGCTAACCCCAACAAGAAGGCAGCGAAATATGCACGGAGGGAAGATGCCATTATTCATGCTCTTGAGATTGAGAATGAGCGCCTAGCCAAGGATAATGTAAATATCAGCTCTCGAATGAGTAACTCTGGTGGTGACCGTGATTGCTCAGCCAGGGAATCACCTGCCACGTCTCACTCTGGCGAGGAGAATGGAGATATGACTGATGATGGAAGGAGAAAAAGAACACCAAATGATTCAGAGGATGATGGAACAGAAGGAGTTAAGCGCATGAGAGGACTTCAGGACCTGGGAATGGGTGTGGTATCAAAAAGGTCAGTCCAGACGGAAGGGCTTCTTGAAATAGTTCAGCACGACAATGCTTCACTCTTACATTCAAACACTCAGAATGGCATGCCCAATGGAAGTCTTGCAAATGGAAGCAAAAATTCCTCATCCTTGAGAAGAAAGAGATCTCCAGTGGCAACCGCTAATGAATTCCTGAAAAGAAAAAGTCGTAGCCGACCTCTGACAAAGGTTTTGGAGAGTACTGAAATGGTGTCTATTCCAGTTACAGGTGACCAACTTCCAAATTCAAGTGGTTCATCTCTTCAATTATCTGACGGCAAGGTTCCTGAATTAGAACTAAACGAGTCAAAAAGGAGTTTATCTATGGACCACACCGGAGTTTCATGTGATAATGATGCTTCAACAGATGCTCCTGAACAAGCTACAGTGTCTTCCTATATTAATCAGATGAAAGAGAATGAAATTGTCAGCAAATCTGAGTTATTGGAGAATGGTTCTTCTAAAAGAATCTTTGATGTGCGGCTTGTTGGTGAAGAAAAACGCCCTTCAGGTAATTCTGCTGTACTTGCTCCTTGTTCATCTGGAAGGCCTGAAATTGGTGTGGCGGCAAGGCAATCTAATCGAAGTAGTCAAGCTGAAGCTGAATCTTTGAGAAATGGGAGACCTAATGAATCTGGTCCTACAAGTTCTGCAGCCGTGCATGATATTTGCCAAAGTATAGAAAGAGGTGGCTCAAAGTGGCAGTCAAAAGGAAAGAGAAACTCAAGACAAACAAGTAGAGATAGGAAACATAACTCGAGGAAATATATGAACGTTGATGACTTATCCAATGCTAGTTTGGCAAGCATAGGGTGTTCTGATATGCTATGTCATGTTTCGGACCTGAAAAGGAATTGCAATGGTATTAGTGGTTCTGCTACATTTGATTACACATTACAAGGAAAGTCCAAACAAGTTGCGGAATTGTCTGATGGACCGACTCAAAGGTCACTTCCTTATCGGCAGTCTCGCTTCATGGTACCTGCAAGATATCAGACATCTGATTCTATTGCCCGCAATACTTCATTATATGATGTCAAAGTTGAGATTAAAGCAAAGTACCGGCCACAGCATGTTCCGCTGGTTTCTTTAACGAGTAAATTGAATGGTAAAGCCATTGTTGGTCACCCGGTCACAGTTAAGGCTTTGGATGATGGTTATAGTGACAGACTGTTTGGCAGTATGGAATGTGATCTTAGAGGCGGCAAACTTAGTTACGCAGTTCAACAAACTGCAGAAATCGGAAAAATCCCAGCCAGGCATTTGGGCTCGCCAAATTCTCCAAAAACAAAGAAATCCGGACTACTGCAAAAAAAGACCAGGAAGTTATCTTCACTGACTGGTCACAGGCAATCCGAAGAGAGGAAGCTACCGGTAGAGAAAAGCGGTCCGGTAATAGCTTGTATCCCCCTTAAGTTAGTTTTCAGTAGGATAAATGAAGCAGTGAATGGGTTAGCGCGACCAACACATCGTGTGTTAAAAACCAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PWWP

Protein Analysis

699

Amino Acids

76.02

Weight (kDa)

9.51

Isoelectric Point (pI)

56.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PWWP PF00855 17 - 104 7.5e-11 PWWP domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 451
AasI GACNNNNNNGTC 1 cut(s) 1552
Acc36I ACCTGC 2 cut(s) 451, 1597
Acc65I GGTACC 1 cut(s) 1585
AccB1I GGYRCC 2 cut(s) 69, 1585
AccII CGCG 1 cut(s) 2065
AccIII TCCGGA 1 cut(s) 1904
AciI CCGC 8 cut(s) 747, 1087, 1172, 1526, 1621, 1685, 1809, 1992
AclI AACGTT 1 cut(s) 1380
AcoI YGGCCR 3 cut(s) 89, 172, 1670
AcsI RAATTY 4 cut(s) 706, 755, 850, 1882
AcuI CTGAAG 3 cut(s) 545, 1098, 1224
AcyI GRCGYC 1 cut(s) 70
AdeI CACNNNGTG 1 cut(s) 2078
AfaI GTAC 4 cut(s) 808, 1131, 1587, 1667
AfiI CCNNNNNNNGG 7 cut(s) 60, 149, 370, 574, 833, 1163, 1968
AflII CTTAAG 1 cut(s) 2018
AgeI ACCGGT 1 cut(s) 1978
AgsI TTSAA 8 cut(s) 209, 620, 657, 855, 872, 969, 1711, 1832
AhdI GACNNNNNGTC 1 cut(s) 118
AjiI CACGTC 1 cut(s) 450
AjnI CCWGG 4 cut(s) 431, 567, 1862, 1925
AluBI AGCT 8 cut(s) 166, 284, 390, 989, 1202, 1208, 1975, 2006
AluI AGCT 8 cut(s) 166, 284, 390, 989, 1202, 1208, 1975, 2006
Alw26I GTCTC 3 cut(s) 456, 1222, 1578
AlwNI CAGNNNCTG 1 cut(s) 568
Ama87I CYCGRG 1 cut(s) 1363
Aor13HI TCCGGA 1 cut(s) 1904
AoxI GGCC 4 cut(s) 89, 172, 1154, 1670
ApeKI GCWGC 5 cut(s) 275, 278, 281, 302, 1259
ApoI RAATTY 4 cut(s) 706, 755, 850, 1882
ArsI GACNNNNNNTTYG 6 cut(s) 781, 813, 1295, 1327, 1763, 1795
AseI ATTAAT 1 cut(s) 1008
AsiGI ACCGGT 1 cut(s) 1978
Asp700I GAANNNNTTC 2 cut(s) 612, 624
Asp718I GGTACC 1 cut(s) 1585
AspA2I CCTAGG 1 cut(s) 143
AspLEI GCGC 4 cut(s) 72, 363, 549, 2065
AspS9I GGNCC 9 cut(s) 51, 64, 147, 565, 934, 1244, 1447, 1541, 1994
AsuC2I CCSGG 4 cut(s) 93, 151, 176, 1736
AsuHPI GGTGA 7 cut(s) 172, 235, 425, 432, 848, 1109, 1724
AvaI CYCGRG 1 cut(s) 1363
AvaII GGWCC 9 cut(s) 51, 64, 147, 565, 934, 1244, 1447, 1541, 1994
AvrII CCTAGG 1 cut(s) 143
BanI GGYRCC 2 cut(s) 69, 1585
BanII GRGCYC 1 cut(s) 1877
BbsI GAAGAC 1 cut(s) 990
BbvI GCAGC 5 cut(s) 262, 265, 293, 314, 1271
BccI CCATC 4 cut(s) 482, 521, 1532, 1754
BceAI ACGGC 3 cut(s) 46, 898, 1247
BcgI CGANNNNNNTGC 4 cut(s) 242, 276, 1169, 1203
BciT130I CCWGG 4 cut(s) 433, 569, 1864, 1927
BciVI GTATCC 1 cut(s) 2021
BcnI CCSGG 4 cut(s) 93, 151, 176, 1736
BcoDI GTCTC 3 cut(s) 456, 1222, 1578
BfaI CTAG 3 cut(s) 144, 365, 1401
BfmI CTRYAG 4 cut(s) 279, 990, 1257, 1839
BfoI RGCGCY 2 cut(s) 73, 364
BfrI CTTAAG 1 cut(s) 2018
BfuAI ACCTGC 2 cut(s) 451, 1597
BfuI GTATCC 1 cut(s) 2021
BglII AGATCT 1 cut(s) 731
BisI GCNGC 8 cut(s) 276, 279, 282, 303, 1088, 1173, 1260, 1810
BlnI CCTAGG 1 cut(s) 143
BlpI GCTNAGC 1 cut(s) 427
BlsI GCNGC 8 cut(s) 277, 280, 283, 304, 1089, 1174, 1261, 1811
BmcAI AGTACT 1 cut(s) 808
Bme1390I CCNGG 8 cut(s) 93, 151, 176, 433, 569, 1736, 1864, 1927
Bme18I GGWCC 9 cut(s) 51, 64, 147, 565, 934, 1244, 1447, 1541, 1994
BmeRI GACNNNNNGTC 1 cut(s) 118
BmeT110I CYCGRG 1 cut(s) 1363
BmgBI CACGTC 1 cut(s) 450
BmgT120I GGNCC 9 cut(s) 51, 64, 147, 565, 934, 1244, 1447, 1541, 1994
BmiI GGNNCC 5 cut(s) 52, 65, 71, 891, 1587
BmrFI CCNGG 8 cut(s) 93, 151, 176, 433, 569, 1736, 1864, 1927
BmsI GCATC 4 cut(s) 28, 316, 952, 964
BpiI GAAGAC 1 cut(s) 990
BpmI CTGGAG 1 cut(s) 720
Bpu1102I GCTNAGC 1 cut(s) 427
BpuEI CTTGAG 3 cut(s) 365, 739, 1315
BpuMI CCSGG 4 cut(s) 93, 151, 176, 1736
BsaHI GRCGYC 1 cut(s) 70
BsaI GGTCTC 1 cut(s) 1222
BsaJI CCNNGG 5 cut(s) 54, 143, 369, 432, 568
BsaWI WCCGGW 6 cut(s) 20, 157, 941, 1904, 1978, 1996
BsaXI ACNNNNNCTCC 2 cut(s) 961, 991
Bsc4I CCNNNNNNNGG 7 cut(s) 60, 149, 370, 574, 833, 1163, 1968
Bse118I RCCGGY 2 cut(s) 1668, 1978
Bse1I ACTGG 4 cut(s) 200, 737, 827, 1951
Bse3DI GCAATG 2 cut(s) 258, 1471
BseAI TCCGGA 1 cut(s) 1904
BseBI CCWGG 4 cut(s) 433, 569, 1864, 1927
BseDI CCNNGG 5 cut(s) 54, 143, 369, 432, 568
BseGI GGATG 4 cut(s) 184, 529, 713, 1762
BseLI CCNNNNNNNGG 7 cut(s) 60, 149, 370, 574, 833, 1163, 1968
BseMI GCAATG 2 cut(s) 258, 1471
BseMII CTCAG 4 cut(s) 114, 441, 677, 1035
BseNI ACTGG 4 cut(s) 200, 737, 827, 1951
BseRI GAGGAG 1 cut(s) 479
BseX3I CGGCCG 1 cut(s) 172
BseXI GCAGC 5 cut(s) 262, 265, 293, 314, 1271
BseYI CCCAGC 1 cut(s) 1858
Bsh1236I CGCG 1 cut(s) 2065
Bsh1285I CGRYCG 1 cut(s) 175
BshFI GGCC 4 cut(s) 91, 174, 1156, 1672
BshNI GGYRCC 2 cut(s) 69, 1585
BshTI ACCGGT 1 cut(s) 1978
BsiEI CGRYCG 1 cut(s) 175
BsiHKCI CYCGRG 1 cut(s) 1363
BslFI GGGAC 1 cut(s) 166
BslI CCNNNNNNNGG 7 cut(s) 60, 149, 370, 574, 833, 1163, 1968
BsmAI GTCTC 3 cut(s) 456, 1222, 1578
BsmBI CGTCTC 1 cut(s) 456
BsmFI GGGAC 1 cut(s) 166
BsmI GAATGC 1 cut(s) 260
BsnI GGCC 4 cut(s) 91, 174, 1156, 1672
Bso31I GGTCTC 1 cut(s) 1222
BsoBI CYCGRG 1 cut(s) 1363
Bsp1286I GDGCHC 1 cut(s) 1877
Bsp13I TCCGGA 1 cut(s) 1904
Bsp143I GATC 2 cut(s) 731, 1798
Bsp1720I GCTNAGC 1 cut(s) 427
BspACI CCGC 8 cut(s) 747, 1087, 1172, 1526, 1621, 1685, 1809, 1992
BspANI GGCC 4 cut(s) 91, 174, 1156, 1672
BspCNI CTCAG 4 cut(s) 115, 440, 676, 1036
BspEI TCCGGA 1 cut(s) 1904
BspFNI CGCG 1 cut(s) 2065
BspLI GGNNCC 5 cut(s) 52, 65, 71, 891, 1587
BspMAI CTGCAG 3 cut(s) 283, 1261, 1843
BspMI ACCTGC 2 cut(s) 451, 1597
BspT107I GGYRCC 2 cut(s) 69, 1585
BspTI CTTAAG 1 cut(s) 2018
BspTNI GGTCTC 1 cut(s) 1222
BsrDI GCAATG 2 cut(s) 258, 1471
BsrFI RCCGGY 2 cut(s) 1668, 1978
BsrI ACTGG 4 cut(s) 200, 737, 827, 1951
BssAI RCCGGY 2 cut(s) 1668, 1978
BssECI CCNNGG 5 cut(s) 54, 143, 369, 432, 568
BssMI GATC 2 cut(s) 731, 1798
BssNI GRCGYC 1 cut(s) 70
BssT1I CCWWGG 3 cut(s) 54, 143, 369
Bst2UI CCWGG 4 cut(s) 433, 569, 1864, 1927
Bst4CI ACNGT 4 cut(s) 419, 994, 1744, 1779
Bst6I CTCTTC 2 cut(s) 873, 1959
BstACI GRCGYC 1 cut(s) 70
BstAFI CTTAAG 1 cut(s) 2018
BstAPI GCANNNNNTGC 1 cut(s) 275
BstC8I GCNNGC 5 cut(s) 187, 674, 1411, 1621, 1877
BstDEI CTNAG 6 cut(s) 123, 427, 663, 1044, 1802, 1817
BstEII GGTNACC 3 cut(s) 413, 836, 1730
BstENI CCTNNNNNAGG 1 cut(s) 368
BstF5I GGATG 4 cut(s) 184, 529, 713, 1762
BstFNI CGCG 1 cut(s) 2065
BstH2I RGCGCY 2 cut(s) 73, 364
BstHHI GCGC 4 cut(s) 72, 363, 549, 2065
BstKTI GATC 2 cut(s) 734, 1801
BstMAI GTCTC 3 cut(s) 456, 1222, 1578
BstMBI GATC 2 cut(s) 731, 1798
BstMCI CGRYCG 1 cut(s) 175
BstMWI GCNNNNNNNGC 6 cut(s) 275, 281, 311, 1133, 1406, 1684
BstNI CCWGG 4 cut(s) 433, 569, 1864, 1927
BstNSI RCATGY 2 cut(s) 676, 1682
BstPI GGTNACC 3 cut(s) 413, 836, 1730
BstSCI CCNGG 8 cut(s) 91, 149, 174, 431, 567, 1734, 1862, 1925
BstSFI CTRYAG 4 cut(s) 279, 990, 1257, 1839
BstUI CGCG 1 cut(s) 2065
BstV1I GCAGC 5 cut(s) 262, 265, 293, 314, 1271
BstV2I GAAGAC 1 cut(s) 990
BstX2I RGATCY 1 cut(s) 731
BstXI CCANNNNNNTGG 1 cut(s) 1870
BstYI RGATCY 1 cut(s) 731
BstZI CGGCCG 1 cut(s) 172
BsuI GTATCC 1 cut(s) 2021
BsuRI GGCC 4 cut(s) 91, 174, 1156, 1672
BtrI CACGTC 1 cut(s) 450
BtsCI GGATG 4 cut(s) 184, 529, 713, 1762
BtsI GCAGTG 1 cut(s) 2055
BtsIMutI CAGTG 5 cut(s) 51, 744, 999, 1940, 2055
BveI ACCTGC 2 cut(s) 451, 1597
Cac8I GCNNGC 5 cut(s) 187, 674, 1411, 1621, 1877
CaiI CAGNNNCTG 1 cut(s) 568
CfoI GCGC 4 cut(s) 72, 363, 549, 2065
Cfr10I RCCGGY 2 cut(s) 1668, 1978
Cfr13I GGNCC 9 cut(s) 51, 64, 147, 565, 934, 1244, 1447, 1541, 1994
CpoI CGGWCCG 1 cut(s) 1994
CseI GACGC 2 cut(s) 30, 191
Csp6I GTAC 4 cut(s) 807, 1130, 1586, 1666
CspAI ACCGGT 1 cut(s) 1978
CspI CGGWCCG 1 cut(s) 1994
CviAII CATG 8 cut(s) 338, 550, 673, 951, 1268, 1439, 1582, 1679
CviQI GTAC 4 cut(s) 807, 1130, 1586, 1666
DdeI CTNAG 6 cut(s) 123, 427, 663, 1044, 1802, 1817
DinI GGCGCC 1 cut(s) 71
DpnI GATC 2 cut(s) 733, 1800
DpnII GATC 2 cut(s) 731, 1798
DraIII CACNNNGTG 1 cut(s) 2078
DrdI GACNNNNNNGTC 1 cut(s) 1552
DriI GACNNNNNGTC 1 cut(s) 118
DseDI GACNNNNNNGTC 1 cut(s) 1552
EaeI YGGCCR 3 cut(s) 89, 172, 1670
EagI CGGCCG 1 cut(s) 172
Eam1104I CTCTTC 2 cut(s) 873, 1959
Eam1105I GACNNNNNGTC 1 cut(s) 118
EarI CTCTTC 2 cut(s) 873, 1959
EclXI CGGCCG 1 cut(s) 172
Eco130I CCWWGG 3 cut(s) 54, 143, 369
Eco147I AGGCCT 1 cut(s) 1156
Eco24I GRGCYC 1 cut(s) 1877
Eco31I GGTCTC 1 cut(s) 1222
Eco32I GATATC 1 cut(s) 1598
Eco47I GGWCC 9 cut(s) 51, 64, 147, 565, 934, 1244, 1447, 1541, 1994
Eco52I CGGCCG 1 cut(s) 172
Eco57I CTGAAG 3 cut(s) 545, 1098, 1224
Eco88I CYCGRG 1 cut(s) 1363
Eco91I GGTNACC 3 cut(s) 413, 836, 1730
EcoNI CCTNNNNNAGG 1 cut(s) 368
EcoO109I RGGNCCY 2 cut(s) 51, 565
EcoO65I GGTNACC 3 cut(s) 413, 836, 1730
EcoRI GAATTC 1 cut(s) 755
EcoRII CCWGG 4 cut(s) 431, 567, 1862, 1925
EcoRV GATATC 1 cut(s) 1598
EcoT14I CCWWGG 3 cut(s) 54, 143, 369
EcoT22I ATGCAT 1 cut(s) 260
EcoT38I GRGCYC 1 cut(s) 1877
EgeI GGCGCC 1 cut(s) 71
EheI GGCGCC 1 cut(s) 71
ErhI CCWWGG 3 cut(s) 54, 143, 369
Esp3I CGTCTC 1 cut(s) 456
FaeI CATG 8 cut(s) 341, 553, 676, 954, 1271, 1442, 1585, 1682
FalI AAGNNNNNCTT 2 cut(s) 600, 632
FaqI GGGAC 1 cut(s) 166
FatI CATG 8 cut(s) 337, 549, 672, 950, 1267, 1438, 1581, 1678
FauI CCCGC 1 cut(s) 1628
Fnu4HI GCNGC 8 cut(s) 276, 279, 282, 303, 1088, 1173, 1260, 1810
FokI GGATG 4 cut(s) 191, 536, 700, 1769
FriOI GRGCYC 1 cut(s) 1877
Fsp4HI GCNGC 8 cut(s) 276, 279, 282, 303, 1088, 1173, 1260, 1810
FspBI CTAG 3 cut(s) 144, 365, 1401
GlaI GCGC 4 cut(s) 71, 362, 548, 2064
GluI GCNGC 8 cut(s) 276, 279, 282, 303, 1088, 1173, 1260, 1810
GsaI CCCAGC 1 cut(s) 1862
GsuI CTGGAG 1 cut(s) 720
HaeII RGCGCY 2 cut(s) 73, 364
HaeIII GGCC 4 cut(s) 91, 174, 1156, 1672
HgaI GACGC 2 cut(s) 30, 191
HhaI GCGC 4 cut(s) 72, 363, 549, 2065
Hin1I GRCGYC 1 cut(s) 70
Hin1II CATG 8 cut(s) 341, 553, 676, 954, 1271, 1442, 1585, 1682
Hin6I GCGC 4 cut(s) 70, 361, 547, 2063
HinP1I GCGC 4 cut(s) 70, 361, 547, 2063
HindIII AAGCTT 1 cut(s) 164
HphI GGTGA 7 cut(s) 172, 235, 425, 432, 848, 1109, 1724
Hpy166II GTNNAC 1 cut(s) 193
Hpy8I GTNNAC 1 cut(s) 193
HpyAV CCTTC 6 cut(s) 292, 486, 530, 602, 1122, 1146
HpyCH4III ACNGT 4 cut(s) 419, 994, 1744, 1779
HpyCH4IV ACGT 2 cut(s) 449, 1380
HpyF10VI GCNNNNNNNGC 6 cut(s) 275, 281, 311, 1133, 1406, 1684
HpyF3I CTNAG 6 cut(s) 123, 427, 663, 1044, 1802, 1817
HpySE526I ACGT 2 cut(s) 449, 1380
Hsp92I GRCGYC 1 cut(s) 70
Hsp92II CATG 8 cut(s) 341, 553, 676, 954, 1271, 1442, 1585, 1682
HspAI GCGC 4 cut(s) 70, 361, 547, 2063
KasI GGCGCC 1 cut(s) 69
Kpn2I TCCGGA 1 cut(s) 1904
KpnI GGTACC 1 cut(s) 1589
Kzo9I GATC 2 cut(s) 731, 1798
LmnI GCTCC 2 cut(s) 982, 1141
Lsp1109I GCAGC 5 cut(s) 262, 265, 293, 314, 1271
LweI GCATC 4 cut(s) 28, 316, 952, 964
MaeI CTAG 3 cut(s) 144, 365, 1401
MaeII ACGT 2 cut(s) 449, 1380
MalI GATC 2 cut(s) 733, 1800
MboI GATC 2 cut(s) 731, 1798
MboII GAAGA 8 cut(s) 335, 735, 860, 990, 1056, 1112, 1929, 1976
MflI RGATCY 1 cut(s) 731
MhlI GDGCHC 1 cut(s) 1877
Mly113I GGCGCC 1 cut(s) 70
MlyI GAGTC 4 cut(s) 26, 148, 920, 1540
Mph1103I ATGCAT 1 cut(s) 260
MroI TCCGGA 1 cut(s) 1904
MroXI GAANNNNTTC 2 cut(s) 612, 624
MseI TTAA 7 cut(s) 543, 1008, 1656, 1697, 1746, 2019, 2084
MslI CAYNNNNRTG 1 cut(s) 636
MspA1I CMGCKG 1 cut(s) 1687
MspCI CTTAAG 1 cut(s) 2018
MspR9I CCNGG 8 cut(s) 93, 151, 176, 433, 569, 1736, 1864, 1927
Mva1269I GAATGC 1 cut(s) 260
MvaI CCWGG 4 cut(s) 433, 569, 1864, 1927
MvnI CGCG 1 cut(s) 2065
MwoI GCNNNNNNNGC 6 cut(s) 275, 281, 311, 1133, 1406, 1684
NarI GGCGCC 1 cut(s) 70
NciI CCSGG 4 cut(s) 93, 151, 176, 1736
NdeII GATC 2 cut(s) 731, 1798
NlaIII CATG 8 cut(s) 341, 553, 676, 954, 1271, 1442, 1585, 1682
NlaIV GGNNCC 5 cut(s) 52, 65, 71, 891, 1587
NmeAIII GCCGAG 1 cut(s) 150
NmuCI GTSAC 7 cut(s) 413, 836, 1554, 1730, 1738, 1769, 1949
NsiI ATGCAT 1 cut(s) 260
NspI RCATGY 2 cut(s) 676, 1682
PaeI GCATGC 1 cut(s) 676
PaeR7I CTCGAG 1 cut(s) 1363
PaqCI CACCTGC 1 cut(s) 451
PceI AGGCCT 1 cut(s) 1156
PctI GAATGC 1 cut(s) 260
PdmI GAANNNNTTC 2 cut(s) 612, 624
PfeI GAWTC 6 cut(s) 437, 515, 1074, 1211, 1238, 1610
PfoI TCCNGGA 1 cut(s) 149
PinAI ACCGGT 1 cut(s) 1978
PkrI GCNGC 8 cut(s) 277, 280, 283, 304, 1089, 1174, 1261, 1811
PleI GAGTC 4 cut(s) 25, 148, 919, 1540
PluTI GGCGCC 1 cut(s) 73
PpsI GAGTC 4 cut(s) 25, 148, 919, 1540
PpuMI RGGWCCY 2 cut(s) 51, 565
PshBI ATTAAT 1 cut(s) 1008
Psp1406I AACGTT 1 cut(s) 1380
Psp5II RGGWCCY 2 cut(s) 51, 565
Psp6I CCWGG 4 cut(s) 431, 567, 1862, 1925
PspEI GGTNACC 3 cut(s) 413, 836, 1730
PspFI CCCAGC 1 cut(s) 1858
PspGI CCWGG 4 cut(s) 431, 567, 1862, 1925
PspN4I GGNNCC 5 cut(s) 52, 65, 71, 891, 1587
PspPI GGNCC 9 cut(s) 51, 64, 147, 565, 934, 1244, 1447, 1541, 1994
PspPPI RGGWCCY 2 cut(s) 51, 565
PspXI VCTCGAGB 1 cut(s) 1363
PsrI GAACNNNNNNTAC 2 cut(s) 1462, 1494
PstI CTGCAG 3 cut(s) 283, 1261, 1843
PstNI CAGNNNCTG 1 cut(s) 568
PsuI RGATCY 1 cut(s) 731
RsaI GTAC 4 cut(s) 808, 1131, 1587, 1667
RsaNI GTAC 4 cut(s) 807, 1130, 1586, 1666
RseI CAYNNNNRTG 1 cut(s) 636
Rsr2I CGGWCCG 1 cut(s) 1994
RsrII CGGWCCG 1 cut(s) 1994
SaqAI TTAA 7 cut(s) 543, 1008, 1656, 1697, 1746, 2019, 2084
SatI GCNGC 8 cut(s) 276, 279, 282, 303, 1088, 1173, 1260, 1810
Sau3AI GATC 2 cut(s) 731, 1798
Sau96I GGNCC 9 cut(s) 51, 64, 147, 565, 934, 1244, 1447, 1541, 1994
ScaI AGTACT 1 cut(s) 808
SchI GAGTC 4 cut(s) 26, 148, 920, 1540
ScrFI CCNGG 8 cut(s) 93, 151, 176, 433, 569, 1736, 1864, 1927
SduI GDGCHC 1 cut(s) 1877
SfaNI GCATC 4 cut(s) 28, 316, 952, 964
SfcI CTRYAG 4 cut(s) 279, 990, 1257, 1839
SfoI GGCGCC 1 cut(s) 71
Sfr274I CTCGAG 1 cut(s) 1363
SinI GGWCC 9 cut(s) 51, 64, 147, 565, 934, 1244, 1447, 1541, 1994
SlaI CTCGAG 1 cut(s) 1363
SmiMI CAYNNNNRTG 1 cut(s) 636
SmlI CTYRAG 5 cut(s) 344, 718, 1330, 1363, 2018
SmoI CTYRAG 5 cut(s) 344, 718, 1330, 1363, 2018
SphI GCATGC 1 cut(s) 676
SseBI AGGCCT 1 cut(s) 1156
SsiI CCGC 8 cut(s) 747, 1087, 1172, 1526, 1621, 1685, 1809, 1992
SspDI GGCGCC 1 cut(s) 69
SspMI CTAG 3 cut(s) 144, 365, 1401
StuI AGGCCT 1 cut(s) 1156
StyD4I CCNGG 8 cut(s) 91, 149, 174, 431, 567, 1734, 1862, 1925
StyI CCWWGG 3 cut(s) 54, 143, 369
TaaI ACNGT 4 cut(s) 419, 994, 1744, 1779
TaiI ACGT 2 cut(s) 452, 1383
TaqI TCGA 3 cut(s) 394, 1189, 1364
TaqII GACCGA 1 cut(s) 1558
TatI WGTACW 2 cut(s) 806, 1129
TauI GCSGC 3 cut(s) 1090, 1175, 1812
TfiI GAWTC 6 cut(s) 437, 515, 1074, 1211, 1238, 1610
Tru1I TTAA 7 cut(s) 543, 1008, 1656, 1697, 1746, 2019, 2084
Tru9I TTAA 7 cut(s) 543, 1008, 1656, 1697, 1746, 2019, 2084
TscAI CASTG 5 cut(s) 51, 744, 999, 1947, 2055
TseFI GTSAC 7 cut(s) 413, 836, 1554, 1730, 1738, 1769, 1949
TseI GCWGC 5 cut(s) 275, 278, 281, 302, 1259
Tsp45I GTSAC 7 cut(s) 413, 836, 1554, 1730, 1738, 1769, 1949
TspGWI ACGGA 2 cut(s) 331, 620
TspRI CASTG 5 cut(s) 51, 744, 999, 1947, 2055
Vha464I CTTAAG 1 cut(s) 2018
VpaK11BI GGWCC 9 cut(s) 51, 64, 147, 565, 934, 1244, 1447, 1541, 1994
VspI ATTAAT 1 cut(s) 1008
XagI CCTNNNNNAGG 1 cut(s) 368
XapI RAATTY 4 cut(s) 706, 755, 850, 1882
XceI RCATGY 2 cut(s) 676, 1682
XcmI CCANNNNNNNNNTGG 1 cut(s) 1402
XhoI CTCGAG 1 cut(s) 1363
XmaJI CCTAGG 1 cut(s) 143
XmnI GAANNNNTTC 2 cut(s) 612, 624
XspI CTAG 3 cut(s) 144, 365, 1401
ZrmI AGTACT 1 cut(s) 808
Zsp2I ATGCAT 1 cut(s) 260
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.