Rorug02G0372800

At1g51745-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0005767
Physical Location & Seq
Reverse (-)
47522526 .. 47525504
2979 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0372800.1

Sequence Viewer

Length: 2979 bp
ATGGCTGACGCTTTCGTTTCCGTGCTACTGGAACAACTGGCTTCAATAACCTATCAACAAATAGAGAAAGAGGTGAGACTGGTTGTGGGGGTCAAGAAAGAAGTTGCCAAGATCACCAGCAATCTGAAAGCTATTCAGGCCGTGCTCGAGGATGCAGAGAAGAGGCAACTCAAGGACGCCATCGTCCGAGACTGGCTGGAGAAGCTCAAAGATGTGTCGTATGAGATGGACGACGTGCTTGATGAGTGGACTACTGAGATTCTCATACAGCAAGTTGATCATCACCAACAAGGTGGTGAAGGTAGTACGAGTACTGCTGCTACTGCTGGTACCAAGAAGAAGGTATGTTTCTTCGTACCCTCCAACTGTTTTTGTTTTGGCCAAGTCAATCGAGTGATCCACCGCCGTGACATTGCTCGTAGAATACAAGATCTGAGTGATAGGTTGAATGAGATTGCTAGAGAAAGACTAAGCTATAACTTTCTAAACACTGAAAGAGTCTTTGAACAACTTGAGAGGTTTGAGACTTCATCTTTGATCGATCTCTCCAAGACATTTGGGAGGGAAGATGAAACTGAAGTAGTTGTGGGCAAGTTGGTCGGCGAGAGTAGTCAAGAAGAGAGGAACCCCTTAGTTATCCCTATAGTAGGGATGGGGGGTATGGGAAAAACTACTCTTGCCCAGATAGTCTACAATAATGAAAAGGTGAAGTTAAATTTCACAAAAAGGATATGGGTTTGTGTTTCAGACCCCTTTAGTGAGATCAAAATTGCCAAAGCTATTATTGAAGATCTCAATAAAGATGATGCTCCAAATTCAAGTGATTTGCAGCCTTTATTGAAATGTATACATAGAAATATTGAAGGCCAGAAGTTTCTCCTTGTGCTAGATGATGTGTGGACTGATGATGACAGAAAGTGGGAACAATTAAAGCTATCTTTACAAAGTGGTCTTGTAGGTAGTAGAATATTGGTGACCACACGGAAAGAGGAAGTTGCTATGATGATGGAAGCAACCTCTGCTAATATGATACATTTGGGGAAATTGAGTGAACAATGTTGTTGGTCAATATTTTATAACATTGCTTTGGCCGAGAGGGAAAGAAATGAGTCTAAAGTGTTAGAATCTTTGGGTAAAGACATTGTAAAAAGGTGTCAAGGTTTGCCTCTTATTGCAAAGGCTTTAGGTGGTCTAATGCGCTCTAAGAAGACCAAGAAAGAATGGATAGCTGTTTTGGAAAGTAAGATTTGGGAGTTGGATGTAGTTGAGAACCAAGTTTTTCAACCGCTATTACTAAGTTATTATGATTTGGCCCCAAAAATTAAGCGTTGCCTTTTATATTGTGTTGTTTTTCCAAAAGATCATGCAATTGATAAAGACGATGTGATTGAGTTGTGGATGTCACAAGGTTACCTTAGTTCAAATGAAAACAAGGAAAAAACATTAATGGTCGGCCAAATCTATTTCGATAATTTAGTAATGCGGTCTTTCTTTCAAGATTTTGGGAAAGATGGACTTGGAAATATTAAAAGTTGCAAAATGCATGACATTGTGCACGACTTTCTCCAGTTCTTGACCAAGAGTGAGTGTTTTATTTTGGAGCCCGAAGGTGAAAACAGAATAGAGTTACCAGTGGGTAATAAGTTTCGCCATTTGACCATAACGTCTGCTTCTGTAGGTGCATTTCCCGTTTCTTTCGACAGTTGCAAGAGTTTAAGGACCCTCGCGACTTTTAATTGTGAAATTACTAGTCATAACCCAAATTTTGTTTTACAATTAAAATGCGTGAGGACCTTGAATTTGAGTGATAATAATATGGAAAATCTTCCAAACGAGGTTGACGGGTTGGTGCACTTGAGGTATTTGGATCTATCTAACAACAATTGGAAGAAATTACCCGACACTTTGTGTAATTTGATCAATTTGGAAACCTTGAGACTTAAAAACTGCGGACTTCTTGAAGAGTTACCCGAGGCATTGGGAAAGCTGACCAACTTGCGGCATCTCCATGTTAAGAATAGTAGTGAGCTGAAGTTGCCAAAATCAATTGCGAAGCTGACGCGTCTACAGACCCTAGATCAAGTTAATATTTTTGACGATGGCATTGGCAACAATGGAGTAGAAGGTGCACTATTCAAGGTAAGTGATTTGAGAAATATGGACCAGCTTCAGGGAAAGCTTTGCATAAGTTGGTGGGTTGAGGAGGAGAAAGCGAAAGCTCCGAAGACTGATGCGGAAAAGGCAAATTTGGTGAACAAGAAACATCTTGTTTATTTGAAACTAAGTTTTTCGAACTCGGCAAGCTGGAGATTCATCGACGAAGAAATGCTGAATGCCTTACAGCCCAATCCAATTCTGGAATCTTTAAAGATCGAATATTACAGTGGCACCACATTGTGCCCCAGCTGGATGAACATGTCATTAAATAATTTGAGATGGCTTAGCTTCAGTCTTTGCGGTGTATGTGAATTTGTTCCTCTTCTGGTTTTGGGGAAATTGGTGTCCCTTGAAATACTGCAAATTCGCGTTATGTCGAAAGTGAAAAAGGTGGGATTTGAGTATTCGAGAATCATAGAATCATCCACATCTACATCATCCCTAGAAGTCACTTTATTCCCAAATCTGAAAAAACTGGTGTTCGACGGGCTGCCGGAGTGGGAGGAGTGGGAAGGAATGCCAGCTGGGTTGGGTGAAGATCAGGAGGAGGAGGAAGATTCTCTTGCAAGTATTAAGGTAATGCCGTGCCTTTCTACTTTAGAAATTGCATACTGTACCAAGCTGAAGACACTGCCAAACTTCCTTCGGAGGACGCCGCTCAAGAATTTGAGCATCGATAACAGTATGATTCTTTCTCAAAGTTGCAAAAACAGAGGAGGCATGGAGTGGCCCAAGATTTCTCACATCCCAAACATTAAATTTGATAAGGAGTTGGTACAAAAAGACGGAGCCTGGATCCAACAACAACAACAACAAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PWWP

Protein Analysis

992

Amino Acids

113.01

Weight (kDa)

5.83

Isoelectric Point (pI)

44.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 5 - 94 4.5e-24 Rx N-terminal domain
NB-ARC PF00931 189 - 365 1e-36 NB-ARC domain
WHD_DRP PF23559 450 - 521 6.3e-23 Disease resistance protein Winged helix domain
LRR_14 PF23598 572 - 920 2.8e-30 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 715 - 844 6.5e-24 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1077
AasI GACNNNNNNGTC 2 cut(s) 182, 1663
Acc65I GGTACC 1 cut(s) 329
AccB1I GGYRCC 2 cut(s) 329, 2387
AccBSI CCGCTC 1 cut(s) 2815
AccI GTMKAC 3 cut(s) 690, 847, 2065
AccII CGCG 3 cut(s) 1727, 2062, 2526
AciI CCGC 8 cut(s) 403, 1286, 1483, 1950, 1999, 2234, 2457, 2813
AclWI GGATC 4 cut(s) 391, 1875, 2947, 2960
AcoI YGGCCR 3 cut(s) 379, 1089, 1453
AcsI RAATTY 9 cut(s) 715, 814, 1762, 1798, 2245, 2468, 2520, 2821, 2915
AcuI CTGAAG 5 cut(s) 597, 2051, 2153, 2431, 2801
AcyI GRCGYC 2 cut(s) 177, 2810
AdeI CACNNNGTG 2 cut(s) 1908, 2397
AfaI GTAC 6 cut(s) 307, 313, 331, 357, 2773, 2934
AfiI CCNNNNNNNGG 3 cut(s) 647, 1998, 2170
AflIII ACRYGT 2 cut(s) 2060, 2415
AhlI ACTAGT 1 cut(s) 1748
AjiI CACGTC 1 cut(s) 235
AjnI CCWGG 1 cut(s) 2948
AleI CACNNNNGTG 1 cut(s) 405
Alw21I GWGCWC 4 cut(s) 147, 1557, 1854, 2131
Alw26I GTCTC 4 cut(s) 70, 183, 518, 1930
Alw44I GTGCAC 3 cut(s) 1553, 1850, 2127
AlwI GGATC 4 cut(s) 391, 1875, 2947, 2960
Ama87I CYCGRG 2 cut(s) 146, 1970
AoxI GGCC 7 cut(s) 138, 379, 865, 1089, 1311, 1453, 2885
ApaLI GTGCAC 3 cut(s) 1553, 1850, 2127
ApeKI GCWGC 3 cut(s) 317, 829, 2647
ApoI RAATTY 9 cut(s) 715, 814, 1762, 1798, 2245, 2468, 2520, 2821, 2915
ArsI GACNNNNNNTTYG 4 cut(s) 517, 549, 1783, 1815
AseI ATTAAT 1 cut(s) 1445
Asp700I GAANNNNTTC 2 cut(s) 1824, 2472
Asp718I GGTACC 1 cut(s) 329
AspLEI GCGC 1 cut(s) 1200
AspS9I GGNCC 5 cut(s) 1312, 1719, 1791, 2161, 2886
AsuHPI GGTGA 9 cut(s) 85, 106, 275, 308, 718, 985, 1622, 2263, 2702
AsuII TTCGAA 1 cut(s) 2291
AvaI CYCGRG 2 cut(s) 146, 1970
AvaII GGWCC 3 cut(s) 1719, 1791, 2161
BaeGI GKGCMC 4 cut(s) 1557, 1854, 2131, 2402
BalI TGGCCA 1 cut(s) 381
BamHI GGATCC 1 cut(s) 2952
BanI GGYRCC 2 cut(s) 329, 2387
BanII GRGCYC 1 cut(s) 1605
BbsI GAAGAC 3 cut(s) 1214, 2231, 2789
Bbv12I GWGCWC 4 cut(s) 147, 1557, 1854, 2131
BbvI GCAGC 3 cut(s) 304, 841, 2634
BccI CCATC 7 cut(s) 188, 220, 646, 1000, 1505, 2093, 2430
BceAI ACGGC 3 cut(s) 125, 390, 2725
BcgI CGANNNNNNTGC 2 cut(s) 580, 614
BciT130I CCWGG 1 cut(s) 2950
BclI TGATCA 2 cut(s) 277, 1917
BcoDI GTCTC 4 cut(s) 70, 183, 518, 1930
BcuI ACTAGT 1 cut(s) 1748
BfaI CTAG 5 cut(s) 459, 887, 1749, 2075, 2600
BfmI CTRYAG 3 cut(s) 642, 1674, 2066
BglII AGATCT 2 cut(s) 430, 790
BisI GCNGC 5 cut(s) 318, 830, 2000, 2648, 2813
BlpI GCTNAGC 1 cut(s) 2441
BlsI GCNGC 5 cut(s) 319, 831, 2001, 2649, 2814
BmcAI AGTACT 1 cut(s) 313
Bme1390I CCNGG 1 cut(s) 2950
Bme18I GGWCC 3 cut(s) 1719, 1791, 2161
BmeT110I CYCGRG 2 cut(s) 146, 1970
BmgBI CACGTC 1 cut(s) 235
BmgT120I GGNCC 5 cut(s) 1312, 1719, 1791, 2161, 2886
BmiI GGNNCC 8 cut(s) 331, 626, 1314, 1602, 1721, 2389, 2947, 2954
BmrFI CCNGG 1 cut(s) 2950
BmsI GCATC 5 cut(s) 142, 796, 2011, 2221, 2838
BpiI GAAGAC 3 cut(s) 1214, 2231, 2789
BpmI CTGGAG 3 cut(s) 218, 1550, 2326
Bpu1102I GCTNAGC 1 cut(s) 2441
Bpu14I TTCGAA 1 cut(s) 2291
BpuEI CTTGAG 5 cut(s) 155, 533, 1876, 1954, 2801
Bsa29I ATCGAT 2 cut(s) 540, 2832
BsaHI GRCGYC 2 cut(s) 177, 2810
BsaJI CCNNGG 1 cut(s) 1971
Bsc4I CCNNNNNNNGG 3 cut(s) 647, 1998, 2170
Bse1I ACTGG 7 cut(s) 33, 42, 84, 197, 1567, 1631, 2637
Bse3DI GCAATG 2 cut(s) 411, 1080
BseBI CCWGG 1 cut(s) 2950
BseCI ATCGAT 2 cut(s) 540, 2832
BseDI CCNNGG 1 cut(s) 1971
BseGI GGATG 8 cut(s) 157, 657, 1264, 1404, 2415, 2579, 2594, 2901
BseLI CCNNNNNNNGG 3 cut(s) 647, 1998, 2170
BseMI GCAATG 2 cut(s) 411, 1080
BseMII CTCAG 2 cut(s) 246, 425
BseNI ACTGG 7 cut(s) 33, 42, 84, 197, 1567, 1631, 2637
BseRI GAGGAG 6 cut(s) 2216, 2219, 2675, 2717, 2720, 2886
BseSI GKGCMC 4 cut(s) 1557, 1854, 2131, 2402
BseXI GCAGC 3 cut(s) 304, 841, 2634
BseYI CCCAGC 2 cut(s) 2402, 2681
Bsh1236I CGCG 3 cut(s) 1727, 2062, 2526
BshFI GGCC 7 cut(s) 140, 381, 867, 1091, 1313, 1455, 2887
BshNI GGYRCC 2 cut(s) 329, 2387
BshVI ATCGAT 2 cut(s) 540, 2832
BsiHKAI GWGCWC 4 cut(s) 147, 1557, 1854, 2131
BsiHKCI CYCGRG 2 cut(s) 146, 1970
BsiSI CCGG 1 cut(s) 2651
BslFI GGGAC 1 cut(s) 2488
BslI CCNNNNNNNGG 3 cut(s) 647, 1998, 2170
BsmAI GTCTC 4 cut(s) 70, 183, 518, 1930
BsmFI GGGAC 1 cut(s) 2488
BsmI GAATGC 2 cut(s) 2338, 2679
BsnI GGCC 7 cut(s) 140, 381, 867, 1091, 1313, 1455, 2887
BsoBI CYCGRG 2 cut(s) 146, 1970
Bsp119I TTCGAA 1 cut(s) 2291
Bsp1286I GDGCHC 6 cut(s) 147, 1557, 1605, 1854, 2131, 2402
Bsp1720I GCTNAGC 1 cut(s) 2441
Bsp68I TCGCGA 1 cut(s) 1727
BspACI CCGC 8 cut(s) 403, 1286, 1483, 1950, 1999, 2234, 2457, 2813
BspANI GGCC 7 cut(s) 140, 381, 867, 1091, 1313, 1455, 2887
BspCNI CTCAG 2 cut(s) 247, 426
BspDI ATCGAT 2 cut(s) 540, 2832
BspFNI CGCG 3 cut(s) 1727, 2062, 2526
BspLI GGNNCC 8 cut(s) 331, 626, 1314, 1602, 1721, 2389, 2947, 2954
BspPI GGATC 4 cut(s) 391, 1875, 2947, 2960
BspT104I TTCGAA 1 cut(s) 2291
BspT107I GGYRCC 2 cut(s) 329, 2387
BsrBI CCGCTC 1 cut(s) 2815
BsrDI GCAATG 2 cut(s) 411, 1080
BsrI ACTGG 7 cut(s) 33, 42, 84, 197, 1567, 1631, 2637
BssECI CCNNGG 1 cut(s) 1971
BssNAI GTATAC 1 cut(s) 848
BssNI GRCGYC 2 cut(s) 177, 2810
Bst1107I GTATAC 1 cut(s) 848
Bst2UI CCWGG 1 cut(s) 2950
Bst4CI ACNGT 5 cut(s) 368, 1703, 2384, 2771, 2840
Bst6I CTCTTC 4 cut(s) 155, 612, 1956, 2484
BstACI GRCGYC 2 cut(s) 177, 2810
BstAPI GCANNNNNTGC 1 cut(s) 1019
BstBI TTCGAA 1 cut(s) 2291
BstC8I GCNNGC 2 cut(s) 2302, 2679
BstDEI CTNAG 9 cut(s) 255, 434, 470, 631, 1203, 1295, 1415, 2282, 2441
BstEII GGTNACC 2 cut(s) 973, 1409
BstENI CCTNNNNNAGG 1 cut(s) 645
BstF5I GGATG 8 cut(s) 157, 657, 1264, 1404, 2415, 2579, 2594, 2901
BstFNI CGCG 3 cut(s) 1727, 2062, 2526
BstHHI GCGC 1 cut(s) 1200
BstMAI GTCTC 4 cut(s) 70, 183, 518, 1930
BstMWI GCNNNNNNNGC 6 cut(s) 137, 202, 323, 1019, 2035, 2240
BstNI CCWGG 1 cut(s) 2950
BstNSI RCATGY 1 cut(s) 2419
BstPI GGTNACC 2 cut(s) 973, 1409
BstSCI CCNGG 1 cut(s) 2948
BstSFI CTRYAG 3 cut(s) 642, 1674, 2066
BstSLI GKGCMC 4 cut(s) 1557, 1854, 2131, 2402
BstUI CGCG 3 cut(s) 1727, 2062, 2526
BstV1I GCAGC 3 cut(s) 304, 841, 2634
BstV2I GAAGAC 3 cut(s) 1214, 2231, 2789
BstX2I RGATCY 4 cut(s) 430, 790, 1867, 2952
BstXI CCANNNNNNTGG 1 cut(s) 293
BstYI RGATCY 4 cut(s) 430, 790, 1867, 2952
BstZ17I GTATAC 1 cut(s) 848
Bsu15I ATCGAT 2 cut(s) 540, 2832
BsuRI GGCC 7 cut(s) 140, 381, 867, 1091, 1313, 1455, 2887
BsuTUI ATCGAT 2 cut(s) 540, 2832
BtrI CACGTC 1 cut(s) 235
BtsCI GGATG 8 cut(s) 157, 657, 1264, 1404, 2415, 2579, 2594, 2901
BtsI GCAGTG 1 cut(s) 2786
BtsIMutI CAGTG 4 cut(s) 489, 1638, 2389, 2786
BtuMI TCGCGA 1 cut(s) 1727
Cac8I GCNNGC 2 cut(s) 2302, 2679
CfoI GCGC 1 cut(s) 1200
Cfr13I GGNCC 5 cut(s) 1312, 1719, 1791, 2161, 2886
ClaI ATCGAT 2 cut(s) 540, 2832
CseI GACGC 5 cut(s) 17, 185, 2051, 2068, 2818
Csp6I GTAC 6 cut(s) 306, 312, 330, 356, 2772, 2933
CviAII CATG 5 cut(s) 1364, 1544, 2009, 2416, 2878
CviQI GTAC 6 cut(s) 306, 312, 330, 356, 2772, 2933
DdeI CTNAG 9 cut(s) 255, 434, 470, 631, 1203, 1295, 1415, 2282, 2441
DraI TTTAAA 1 cut(s) 2367
DraIII CACNNNGTG 2 cut(s) 1908, 2397
DrdI GACNNNNNNGTC 2 cut(s) 182, 1663
DseDI GACNNNNNNGTC 2 cut(s) 182, 1663
EaeI YGGCCR 3 cut(s) 379, 1089, 1453
Eam1104I CTCTTC 4 cut(s) 155, 612, 1956, 2484
EarI CTCTTC 4 cut(s) 155, 612, 1956, 2484
Eco24I GRGCYC 1 cut(s) 1605
Eco47I GGWCC 3 cut(s) 1719, 1791, 2161
Eco57I CTGAAG 5 cut(s) 597, 2051, 2153, 2431, 2801
Eco88I CYCGRG 2 cut(s) 146, 1970
Eco91I GGTNACC 2 cut(s) 973, 1409
EcoNI CCTNNNNNAGG 1 cut(s) 645
EcoO109I RGGNCCY 2 cut(s) 1719, 1791
EcoO65I GGTNACC 2 cut(s) 973, 1409
EcoRII CCWGG 1 cut(s) 2948
EcoT22I ATGCAT 1 cut(s) 1545
EcoT38I GRGCYC 1 cut(s) 1605
FaeI CATG 5 cut(s) 1367, 1547, 2012, 2419, 2881
FalI AAGNNNNNCTT 6 cut(s) 1398, 1430, 1500, 1532, 2703, 2735
FaqI GGGAC 1 cut(s) 2488
FatI CATG 5 cut(s) 1363, 1543, 2008, 2415, 2877
FbaI TGATCA 2 cut(s) 277, 1917
FblI GTMKAC 3 cut(s) 690, 847, 2065
Fnu4HI GCNGC 5 cut(s) 318, 830, 2000, 2648, 2813
FokI GGATG 8 cut(s) 164, 664, 1271, 1411, 2422, 2566, 2581, 2888
FriOI GRGCYC 1 cut(s) 1605
Fsp4HI GCNGC 5 cut(s) 318, 830, 2000, 2648, 2813
FspBI CTAG 5 cut(s) 459, 887, 1749, 2075, 2600
GlaI GCGC 1 cut(s) 1199
GluI GCNGC 5 cut(s) 318, 830, 2000, 2648, 2813
GsaI CCCAGC 2 cut(s) 2406, 2685
GsuI CTGGAG 3 cut(s) 218, 1550, 2326
HaeIII GGCC 7 cut(s) 140, 381, 867, 1091, 1313, 1455, 2887
HapII CCGG 1 cut(s) 2651
HgaI GACGC 5 cut(s) 17, 185, 2051, 2068, 2818
HhaI GCGC 1 cut(s) 1200
Hin1I GRCGYC 2 cut(s) 177, 2810
Hin1II CATG 5 cut(s) 1367, 1547, 2012, 2419, 2881
Hin6I GCGC 1 cut(s) 1198
HinP1I GCGC 1 cut(s) 1198
HincII GTYRAC 1 cut(s) 1840
HindII GTYRAC 1 cut(s) 1840
HindIII AAGCTT 1 cut(s) 2177
HpaII CCGG 1 cut(s) 2651
HphI GGTGA 9 cut(s) 85, 106, 275, 308, 718, 985, 1622, 2263, 2702
Hpy188I TCNGA 7 cut(s) 126, 188, 435, 748, 2223, 2625, 2805
Hpy99I CGWCG 3 cut(s) 236, 2321, 2645
HpyAV CCTTC 7 cut(s) 293, 334, 857, 1601, 2117, 2663, 2810
HpyCH4III ACNGT 5 cut(s) 368, 1703, 2384, 2771, 2840
HpyCH4IV ACGT 2 cut(s) 234, 1664
HpyF10VI GCNNNNNNNGC 6 cut(s) 137, 202, 323, 1019, 2035, 2240
HpyF3I CTNAG 9 cut(s) 255, 434, 470, 631, 1203, 1295, 1415, 2282, 2441
HpySE526I ACGT 2 cut(s) 234, 1664
Hsp92I GRCGYC 2 cut(s) 177, 2810
Hsp92II CATG 5 cut(s) 1367, 1547, 2012, 2419, 2881
HspAI GCGC 1 cut(s) 1198
KpnI GGTACC 1 cut(s) 333
Ksp22I TGATCA 2 cut(s) 277, 1917
LmnI GCTCC 4 cut(s) 814, 1600, 2224, 2945
Lsp1109I GCAGC 3 cut(s) 304, 841, 2634
LweI GCATC 5 cut(s) 142, 796, 2011, 2221, 2838
MaeI CTAG 5 cut(s) 459, 887, 1749, 2075, 2600
MaeII ACGT 2 cut(s) 234, 1664
MaeIII GTNAC 7 cut(s) 407, 973, 1401, 1409, 1626, 1965, 2605
MbiI CCGCTC 1 cut(s) 2815
MfeI CAATTG 3 cut(s) 1368, 1882, 2046
MflI RGATCY 4 cut(s) 430, 790, 1867, 2952
MhlI GDGCHC 6 cut(s) 147, 1557, 1605, 1854, 2131, 2402
MlsI TGGCCA 1 cut(s) 381
MluI ACGCGT 1 cut(s) 2060
MluNI TGGCCA 1 cut(s) 381
MlyI GAGTC 2 cut(s) 507, 1118
MmeI TCCRAC 2 cut(s) 387, 1236
Mox20I TGGCCA 1 cut(s) 381
Mph1103I ATGCAT 1 cut(s) 1545
MroXI GAANNNNTTC 2 cut(s) 1824, 2472
MscI TGGCCA 1 cut(s) 381
MslI CAYNNNNRTG 2 cut(s) 405, 2007
Msp20I TGGCCA 1 cut(s) 381
MspA1I CMGCKG 2 cut(s) 2406, 2681
MspI CCGG 1 cut(s) 2651
MspR9I CCNGG 1 cut(s) 2950
MunI CAATTG 3 cut(s) 1368, 1882, 2046
Mva1269I GAATGC 2 cut(s) 2338, 2679
MvaI CCWGG 1 cut(s) 2950
MvnI CGCG 3 cut(s) 1727, 2062, 2526
MwoI GCNNNNNNNGC 6 cut(s) 137, 202, 323, 1019, 2035, 2240
NlaIII CATG 5 cut(s) 1367, 1547, 2012, 2419, 2881
NlaIV GGNNCC 8 cut(s) 331, 626, 1314, 1602, 1721, 2389, 2947, 2954
NmeAIII GCCGAG 2 cut(s) 1117, 2276
NmuCI GTSAC 4 cut(s) 407, 973, 1401, 2605
NruI TCGCGA 1 cut(s) 1727
NsiI ATGCAT 1 cut(s) 1545
NspI RCATGY 1 cut(s) 2419
NspV TTCGAA 1 cut(s) 2291
OliI CACNNNNGTG 1 cut(s) 405
PaeR7I CTCGAG 1 cut(s) 146
PciI ACATGT 1 cut(s) 2415
PctI GAATGC 2 cut(s) 2338, 2679
PdmI GAANNNNTTC 2 cut(s) 1824, 2472
PfeI GAWTC 8 cut(s) 259, 1124, 2310, 2360, 2568, 2576, 2714, 2845
PkrI GCNGC 5 cut(s) 319, 831, 2001, 2649, 2814
PleI GAGTC 2 cut(s) 506, 1117
PpsI GAGTC 2 cut(s) 506, 1117
PpuMI RGGWCCY 2 cut(s) 1719, 1791
PscI ACATGT 1 cut(s) 2415
PshBI ATTAAT 1 cut(s) 1445
PsiI TTATAA 1 cut(s) 1077
Psp5II RGGWCCY 2 cut(s) 1719, 1791
Psp6I CCWGG 1 cut(s) 2948
PspEI GGTNACC 2 cut(s) 973, 1409
PspFI CCCAGC 2 cut(s) 2402, 2681
PspGI CCWGG 1 cut(s) 2948
PspN4I GGNNCC 8 cut(s) 331, 626, 1314, 1602, 1721, 2389, 2947, 2954
PspPI GGNCC 5 cut(s) 1312, 1719, 1791, 2161, 2886
PspPPI RGGWCCY 2 cut(s) 1719, 1791
PspXI VCTCGAGB 1 cut(s) 146
PsuI RGATCY 4 cut(s) 430, 790, 1867, 2952
PvuII CAGCTG 2 cut(s) 2406, 2681
RruI TCGCGA 1 cut(s) 1727
RsaI GTAC 6 cut(s) 307, 313, 331, 357, 2773, 2934
RsaNI GTAC 6 cut(s) 306, 312, 330, 356, 2772, 2933
RseI CAYNNNNRTG 2 cut(s) 405, 2007
SatI GCNGC 5 cut(s) 318, 830, 2000, 2648, 2813
Sau96I GGNCC 5 cut(s) 1312, 1719, 1791, 2161, 2886
ScaI AGTACT 1 cut(s) 313
SchI GAGTC 2 cut(s) 507, 1118
ScrFI CCNGG 1 cut(s) 2950
SduI GDGCHC 6 cut(s) 147, 1557, 1605, 1854, 2131, 2402
SfaNI GCATC 5 cut(s) 142, 796, 2011, 2221, 2838
SfcI CTRYAG 3 cut(s) 642, 1674, 2066
Sfr274I CTCGAG 1 cut(s) 146
SfuI TTCGAA 1 cut(s) 2291
SinI GGWCC 3 cut(s) 1719, 1791, 2161
SlaI CTCGAG 1 cut(s) 146
SmiMI CAYNNNNRTG 2 cut(s) 405, 2007
SmlI CTYRAG 6 cut(s) 146, 170, 512, 1855, 1933, 2816
SmoI CTYRAG 6 cut(s) 146, 170, 512, 1855, 1933, 2816
SpeI ACTAGT 1 cut(s) 1748
SsiI CCGC 8 cut(s) 403, 1286, 1483, 1950, 1999, 2234, 2457, 2813
SspI AATATT 6 cut(s) 859, 969, 1071, 1525, 2089, 2378
SspMI CTAG 5 cut(s) 459, 887, 1749, 2075, 2600
StyD4I CCNGG 1 cut(s) 2948
TaaI ACNGT 5 cut(s) 368, 1703, 2384, 2771, 2840
TaiI ACGT 2 cut(s) 237, 1667
TatI WGTACW 1 cut(s) 311
TauI GCSGC 2 cut(s) 2002, 2815
TfiI GAWTC 8 cut(s) 259, 1124, 2310, 2360, 2568, 2576, 2714, 2845
TscAI CASTG 4 cut(s) 496, 1638, 2389, 2793
TseFI GTSAC 4 cut(s) 407, 973, 1401, 2605
TseI GCWGC 3 cut(s) 317, 829, 2647
Tsp45I GTSAC 4 cut(s) 407, 973, 1401, 2605
TspDTI ATGAA 6 cut(s) 519, 585, 714, 1440, 2302, 2426
TspGWI ACGGA 3 cut(s) 10, 997, 2958
TspRI CASTG 4 cut(s) 496, 1638, 2389, 2793
VneI GTGCAC 3 cut(s) 1553, 1850, 2127
VpaK11BI GGWCC 3 cut(s) 1719, 1791, 2161
VspI ATTAAT 1 cut(s) 1445
XagI CCTNNNNNAGG 1 cut(s) 645
XapI RAATTY 9 cut(s) 715, 814, 1762, 1798, 2245, 2468, 2520, 2821, 2915
XceI RCATGY 1 cut(s) 2419
XcmI CCANNNNNNNNNTGG 1 cut(s) 2353
XhoI CTCGAG 1 cut(s) 146
XmiI GTMKAC 3 cut(s) 690, 847, 2065
XmnI GAANNNNTTC 2 cut(s) 1824, 2472
XspI CTAG 5 cut(s) 459, 887, 1749, 2075, 2600
ZrmI AGTACT 1 cut(s) 313
Zsp2I ATGCAT 1 cut(s) 1545
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.