Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0013476

Physical Location & Seq

Genomic Coordinates Reverse (-)

28272088 .. 28274603

Gene Structure 2516 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g35850.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1581 bp

ATGGAGCACGAGAACCAAGATGGCCAATGTAAGAGTTCAACTGATGATGTAAATGATGAAGTTAAAGAAAGATCCAGAGACCAAAGAGAACCGCTTCCAGGGGAGCCTAAGTGCGTGATCTGCGGCCGTTATGGTGAGTATATATGTGACCAGACGGACGATGATATTTGCAGTTTGGAATGTAAACAGACTTTACTAAGCAGGGTCACCAACTCTCAATTGGCAGTCAGTCAATGTCCTCCTAAACGATTGCCTGCTAATGATGAGTGCTTTTACGTTAGAGATGCTGGTGGCCAATACGGAACTTCAGTCTTGCCTGATGGTCAGACTGAATTGCTTAGAAAAAGACTTGATATTCATGTGAAGGGAGACATAGCTCCAGGACCTATCTTGTCGTTTGCTTCATGTAATCTTCCGCAAAAGCTTGTCCAAAATATAGAGGCTGCAGGATATGAAATGCCCACACCTGTCCAGATGCAAGCAATACCGGCTGCATTGAGTGGCAAAAACTTGCTTGTCTCTGCCGACACAGGCTCTGGTAAAACTGCTTCCTTTCTCATTCCAATTGTTTCATGTTGCTCACATTTTCGGTTTGAGCACTTAACGGGTGAGAAAAAGCCGCTAGCTATGGTTCTAACTCCAACTAGAGAGCTCTGTATACAAGTTGAAGAACAAGCTAAGTTGCTCGGAAAGGGTTTGCCTTTTAAAACTGCACTTGTAGTTGGTGGCGACGCAATGCCCAGACAACTTTTCCGCATTCAGCAAGGAGTTGAGCTCATAGTGGGAACTCCAGGAAGACTAATTGATCTTTTAGCAAACCATGATATTGAATTGGAGGATGTAAGGATTTTTGTTCTTGATGAGGTGGATTGCATGCTCCAAAGGGGGTTCAGGGATCAGGTGATGCAGATATTTAGGGCTCTATCACAACCCCAGGTTTTACTGTATTCTGCAACAACCTCCCAAGATATAGAGAAGATGGTGAGTTCTATGTCAAAAGATGTTACTGTAATCTCTGTTGGCAAGCCTAACAGACCAAATAAGGCTGTGAAGCAGGTGCCTATATGGGTTGAGTCGAAGCAAAAGAAGCAAAAGCTTTTCGATATATTGATGAGTAAGCAGCATTTTATGCCACCAGCTGTGGTTTATGTAGCATCAAGACTTGGAGCAGATCTCTTATCAAATGCAATTAGAGTCACCACTGGTGTGAAAGCTTTATCAATCCATGGGGAGAAATCCATGAAGGAGAGGAGAGATGTCATGAAGTCATTTTTAGTGGGTGATGTTCCTGTTATTGTTGCCACCGGTGTTTTAGGCCGCGGGCTAGATCTCTTGAGTGTAAGACAGGTTATTGTTTTTGACATGCCCAATTCCATTAATGAGTATGTCCACCAGATTGGTCGGGCATCTAGATTGGGAGAAGAGGGTACAGCAATTGTGTTTGTATGTCAGGAAAATAAGAAATTGTTTCCAGAATTGGTTGAAATGTTAAGATCTTCTGGTGCAGCTATACCTAGGGAGCTTGTTAGATCACAATCATACACCATTGGCCGAGGCCAGAAGAAAAGGAAGCACGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C zf-HIT

Protein Analysis

527

Amino Acids

58.21

Weight (kDa)

8.11

Isoelectric Point (pI)

42.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-HIT	PF04438	26 - 53	5.4e-08	HIT zinc finger
DEAD	PF00270	146 - 317	1.3e-43	DEAD/DEAH box helicase
Helicase_C	PF00271	353 - 464	4.4e-20	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0013476)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02065 AT3G02065 AT3G02065
fragaria_vesca	FvH4_6g35850 FvH4_6g35850
malus_domestica	MD17G1003800.v1.1
pyrus_communis	pycom17g00050
rosa_chinensis	RchiOBHm_Chr2g0147891
rosa_laevigata	RLG00000020290
rosa_multiflora	Rmu_sc0000308.1_g000058
rosa_roxburghii	Rroxscaffold_2G00099220
rosa_rugosa	Rorug02G0402700 Rorug02G0402800
rosa_samantha	Rh2AG459700 Rh2BG473000 Rh2CG447000 Rh2DG481900
rosa_wichuraiana	Rw2G037600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1045
Acc36I	ACCTGC	1 cut(s)	1045
AccB1I	GGYRCC	1 cut(s)	1057
AccI	GTMKAC	1 cut(s)	658
AccII	CGCG	1 cut(s)	1320
AciI	CCGC	7 cut(s)	92, 123, 416, 620, 754, 1318, 1320
AclWI	GGATC	2 cut(s)	66, 903
AcoI	YGGCCR	4 cut(s)	22, 124, 292, 1549
AcuI	CTGAAG	1 cut(s)	291
AfaI	GTAC	1 cut(s)	1429
AfiI	CCNNNNNNNGG	1 cut(s)	98
AgeI	ACCGGT	1 cut(s)	1304
AgsI	TTSAA	4 cut(s)	39, 668, 830, 1484
AjnI	CCWGG	4 cut(s)	97, 379, 790, 933
AleI	CACNNNNGTG	1 cut(s)	1205
Alw21I	GWGCWC	4 cut(s)	9, 600, 654, 777
Alw26I	GTCTC	3 cut(s)	72, 363, 523
AlwI	GGATC	2 cut(s)	66, 903
AlwNI	CAGNNNCTG	1 cut(s)	536
AoxI	GGCC	6 cut(s)	22, 124, 292, 1315, 1549, 1555
ApeKI	GCWGC	4 cut(s)	443, 491, 1120, 1505
AseI	ATTAAT	1 cut(s)	1377
AsiGI	ACCGGT	1 cut(s)	1304
Asp700I	GAANNNNTTC	1 cut(s)	93
AspA2I	CCTAGG	1 cut(s)	1514
AspS9I	GGNCC	1 cut(s)	383
AsuHPI	GGTGA	7 cut(s)	146, 199, 620, 913, 994, 1189, 1292
AsuNHI	GCTAGC	1 cut(s)	622
AvaII	GGWCC	1 cut(s)	383
AvrII	CCTAGG	1 cut(s)	1514
BalI	TGGCCA	2 cut(s)	24, 294
BanI	GGYRCC	1 cut(s)	1057
BanII	GRGCYC	3 cut(s)	654, 777, 922
BarI	GAAGNNNNNNTAC	2 cut(s)	532, 564
BauI	CACGAG	2 cut(s)	8, 1574
BbsI	GAAGAC	1 cut(s)	802
Bbv12I	GWGCWC	4 cut(s)	9, 600, 654, 777
BbvI	GCAGC	4 cut(s)	430, 478, 1132, 1517
BccI	CCATC	3 cut(s)	14, 314, 973
BceAI	ACGGC	1 cut(s)	111
BciT130I	CCWGG	4 cut(s)	99, 381, 792, 935
BcoDI	GTCTC	3 cut(s)	72, 363, 523
BfaI	CTAG	5 cut(s)	623, 645, 1325, 1410, 1515
BfmI	CTRYAG	1 cut(s)	444
BfuAI	ACCTGC	1 cut(s)	1045
BglII	AGATCT	3 cut(s)	1171, 1327, 1493
BisI	GCNGC	7 cut(s)	124, 444, 492, 620, 1121, 1318, 1506
BlnI	CCTAGG	1 cut(s)	1514
BlsI	GCNGC	7 cut(s)	125, 445, 493, 621, 1122, 1319, 1507
Bme1390I	CCNGG	4 cut(s)	99, 381, 792, 935
Bme18I	GGWCC	1 cut(s)	383
BmgT120I	GGNCC	1 cut(s)	383
BmiI	GGNNCC	2 cut(s)	105, 1059
BmrFI	CCNGG	4 cut(s)	99, 381, 792, 935
BmsI	GCATC	5 cut(s)	274, 465, 894, 1163, 1415
BmtI	GCTAGC	1 cut(s)	626
BpiI	GAAGAC	1 cut(s)	802
BplI	GAGNNNNNCTC	4 cut(s)	759, 791, 1158, 1190
BpmI	CTGGAG	2 cut(s)	363, 774
BpuEI	CTTGAG	1 cut(s)	1354
BsaBI	GATNNNNATC	1 cut(s)	1534
BsaI	GGTCTC	1 cut(s)	72
BsaJI	CCNNGG	6 cut(s)	98, 933, 1225, 1318, 1514, 1552
BsaWI	WCCGGW	1 cut(s)	1304
BsaXI	ACNNNNNCTCC	2 cut(s)	95, 125
Bsc4I	CCNNNNNNNGG	1 cut(s)	98
Bse118I	RCCGGY	2 cut(s)	487, 1304
Bse1I	ACTGG	1 cut(s)	1207
Bse3DI	GCAATG	1 cut(s)	741
Bse8I	GATNNNNATC	1 cut(s)	1534
BseBI	CCWGG	4 cut(s)	99, 381, 792, 935
BseDI	CCNNGG	6 cut(s)	98, 933, 1225, 1318, 1514, 1552
BseGI	GGATG	1 cut(s)	844
BseJI	GATNNNNATC	1 cut(s)	1534
BseLI	CCNNNNNNNGG	1 cut(s)	98
BseMI	GCAATG	1 cut(s)	741
BseNI	ACTGG	1 cut(s)	1207
BseRI	GAGGAG	1 cut(s)	1264
BseX3I	CGGCCG	1 cut(s)	124
BseXI	GCAGC	4 cut(s)	430, 478, 1132, 1517
BsgI	GTGCAG	2 cut(s)	696, 1524
Bsh1236I	CGCG	1 cut(s)	1320
Bsh1285I	CGRYCG	1 cut(s)	127
BshFI	GGCC	6 cut(s)	24, 126, 294, 1317, 1551, 1557
BshNI	GGYRCC	1 cut(s)	1057
BshTI	ACCGGT	1 cut(s)	1304
BsiEI	CGRYCG	1 cut(s)	127
BsiHKAI	GWGCWC	4 cut(s)	9, 600, 654, 777
BsiSI	CCGG	2 cut(s)	488, 1305
BslI	CCNNNNNNNGG	1 cut(s)	98
BsmAI	GTCTC	3 cut(s)	72, 363, 523
BsmI	GAATGC	1 cut(s)	756
BsnI	GGCC	6 cut(s)	24, 126, 294, 1317, 1551, 1557
Bso31I	GGTCTC	1 cut(s)	72
Bsp1286I	GDGCHC	5 cut(s)	9, 600, 654, 777, 922
Bsp143I	GATC	8 cut(s)	71, 117, 805, 895, 1171, 1327, 1493, 1529
Bsp19I	CCATGG	1 cut(s)	1225
BspACI	CCGC	7 cut(s)	92, 123, 416, 620, 754, 1318, 1320
BspANI	GGCC	6 cut(s)	24, 126, 294, 1317, 1551, 1557
BspFNI	CGCG	1 cut(s)	1320
BspHI	TCATGA	1 cut(s)	1260
BspLI	GGNNCC	2 cut(s)	105, 1059
BspMAI	CTGCAG	1 cut(s)	448
BspMI	ACCTGC	1 cut(s)	1045
BspOI	GCTAGC	1 cut(s)	626
BspPI	GGATC	2 cut(s)	66, 903
BspT107I	GGYRCC	1 cut(s)	1057
BspTNI	GGTCTC	1 cut(s)	72
BsrDI	GCAATG	1 cut(s)	741
BsrFI	RCCGGY	2 cut(s)	487, 1304
BsrI	ACTGG	1 cut(s)	1207
BssAI	RCCGGY	2 cut(s)	487, 1304
BssECI	CCNNGG	6 cut(s)	98, 933, 1225, 1318, 1514, 1552
BssMI	GATC	8 cut(s)	71, 117, 805, 895, 1171, 1327, 1493, 1529
BssNAI	GTATAC	1 cut(s)	659
BssSI	CACGAG	2 cut(s)	8, 1574
BssT1I	CCWWGG	2 cut(s)	1225, 1514
Bst1107I	GTATAC	1 cut(s)	659
Bst2BI	CACGAG	2 cut(s)	8, 1574
Bst2UI	CCWGG	4 cut(s)	99, 381, 792, 935
Bst4CI	ACNGT	2 cut(s)	945, 1009
Bst6I	CTCTTC	1 cut(s)	1416
BstAPI	GCANNNNNTGC	1 cut(s)	1129
BstC8I	GCNNGC	6 cut(s)	255, 480, 624, 875, 1025, 1322
BstDEI	CTNAG	4 cut(s)	108, 197, 338, 678
BstDSI	CCRYGG	2 cut(s)	1225, 1318
BstEII	GGTNACC	1 cut(s)	205
BstF5I	GGATG	1 cut(s)	844
BstFNI	CGCG	1 cut(s)	1320
BstKTI	GATC	8 cut(s)	74, 120, 808, 898, 1174, 1330, 1496, 1532
BstMAI	GTCTC	3 cut(s)	72, 363, 523
BstMBI	GATC	8 cut(s)	71, 117, 805, 895, 1171, 1327, 1493, 1529
BstMCI	CGRYCG	1 cut(s)	127
BstMWI	GCNNNNNNNGC	4 cut(s)	120, 488, 1087, 1129
BstNI	CCWGG	4 cut(s)	99, 381, 792, 935
BstNSI	RCATGY	2 cut(s)	877, 1366
BstPI	GGTNACC	1 cut(s)	205
BstSCI	CCNGG	4 cut(s)	97, 379, 790, 933
BstSFI	CTRYAG	1 cut(s)	444
BstUI	CGCG	1 cut(s)	1320
BstV1I	GCAGC	4 cut(s)	430, 478, 1132, 1517
BstV2I	GAAGAC	1 cut(s)	802
BstX2I	RGATCY	4 cut(s)	71, 1171, 1327, 1493
BstXI	CCANNNNNNTGG	1 cut(s)	1397
BstYI	RGATCY	4 cut(s)	71, 1171, 1327, 1493
BstZ17I	GTATAC	1 cut(s)	659
BstZI	CGGCCG	1 cut(s)	124
BsuRI	GGCC	6 cut(s)	24, 126, 294, 1317, 1551, 1557
BtgI	CCRYGG	2 cut(s)	1225, 1318
BtsCI	GGATG	1 cut(s)	844
BtsIMutI	CAGTG	1 cut(s)	1200
BveI	ACCTGC	1 cut(s)	1045
Cac8I	GCNNGC	6 cut(s)	255, 480, 624, 875, 1025, 1322
CaiI	CAGNNNCTG	1 cut(s)	536
CciI	TCATGA	1 cut(s)	1260
Cfr10I	RCCGGY	2 cut(s)	487, 1304
Cfr13I	GGNCC	1 cut(s)	383
Cfr42I	CCGCGG	1 cut(s)	1321
CseI	GACGC	1 cut(s)	740
Csp6I	GTAC	1 cut(s)	1428
CspAI	ACCGGT	1 cut(s)	1304
CviAII	CATG	9 cut(s)	359, 405, 573, 821, 874, 1226, 1240, 1261, 1363
CviQI	GTAC	1 cut(s)	1428
DdeI	CTNAG	4 cut(s)	108, 197, 338, 678
DpnI	GATC	8 cut(s)	73, 119, 807, 897, 1173, 1329, 1495, 1531
DpnII	GATC	8 cut(s)	71, 117, 805, 895, 1171, 1327, 1493, 1529
DraI	TTTAAA	1 cut(s)	706
EaeI	YGGCCR	4 cut(s)	22, 124, 292, 1549
EagI	CGGCCG	1 cut(s)	124
Eam1104I	CTCTTC	1 cut(s)	1416
EarI	CTCTTC	1 cut(s)	1416
Ecl136II	GAGCTC	2 cut(s)	652, 775
EclXI	CGGCCG	1 cut(s)	124
Eco130I	CCWWGG	2 cut(s)	1225, 1514
Eco24I	GRGCYC	3 cut(s)	654, 777, 922
Eco31I	GGTCTC	1 cut(s)	72
Eco47I	GGWCC	1 cut(s)	383
Eco52I	CGGCCG	1 cut(s)	124
Eco53kI	GAGCTC	2 cut(s)	652, 775
Eco57I	CTGAAG	1 cut(s)	291
Eco91I	GGTNACC	1 cut(s)	205
EcoICRI	GAGCTC	2 cut(s)	652, 775
EcoO109I	RGGNCCY	1 cut(s)	383
EcoO65I	GGTNACC	1 cut(s)	205
EcoRII	CCWGG	4 cut(s)	97, 379, 790, 933
EcoT14I	CCWWGG	2 cut(s)	1225, 1514
EcoT38I	GRGCYC	3 cut(s)	654, 777, 922
ErhI	CCWWGG	2 cut(s)	1225, 1514
FaeI	CATG	9 cut(s)	362, 408, 576, 824, 877, 1229, 1243, 1264, 1366
FatI	CATG	9 cut(s)	358, 404, 572, 820, 873, 1225, 1239, 1260, 1362
FauI	CCCGC	1 cut(s)	1313
FblI	GTMKAC	1 cut(s)	658
Fnu4HI	GCNGC	7 cut(s)	124, 444, 492, 620, 1121, 1318, 1506
FokI	GGATG	1 cut(s)	851
FriOI	GRGCYC	3 cut(s)	654, 777, 922
Fsp4HI	GCNGC	7 cut(s)	124, 444, 492, 620, 1121, 1318, 1506
FspBI	CTAG	5 cut(s)	623, 645, 1325, 1410, 1515
GluI	GCNGC	7 cut(s)	124, 444, 492, 620, 1121, 1318, 1506
GsuI	CTGGAG	2 cut(s)	363, 774
HaeIII	GGCC	6 cut(s)	24, 126, 294, 1317, 1551, 1557
HapII	CCGG	2 cut(s)	488, 1305
HgaI	GACGC	1 cut(s)	740
Hin1II	CATG	9 cut(s)	362, 408, 576, 824, 877, 1229, 1243, 1264, 1366
HindIII	AAGCTT	3 cut(s)	422, 1094, 1212
HinfI	GANTC	2 cut(s)	1073, 1194
HpaII	CCGG	2 cut(s)	488, 1305
HphI	GGTGA	7 cut(s)	146, 199, 620, 913, 994, 1189, 1292
Hpy166II	GTNNAC	3 cut(s)	185, 659, 1390
Hpy188I	TCNGA	2 cut(s)	327, 689
Hpy188III	TCNNGA	9 cut(s)	75, 472, 857, 1158, 1261, 1333, 1410, 1451, 1472
Hpy8I	GTNNAC	3 cut(s)	185, 659, 1390
Hpy99I	CGWCG	1 cut(s)	734
HpyAV	CCTTC	2 cut(s)	358, 1237
HpyCH4III	ACNGT	2 cut(s)	945, 1009
HpyCH4IV	ACGT	1 cut(s)	276
HpyF10VI	GCNNNNNNNGC	4 cut(s)	120, 488, 1087, 1129
HpyF3I	CTNAG	4 cut(s)	108, 197, 338, 678
HpySE526I	ACGT	1 cut(s)	276
Hsp92II	CATG	9 cut(s)	362, 408, 576, 824, 877, 1229, 1243, 1264, 1366
KspI	CCGCGG	1 cut(s)	1321
Kzo9I	GATC	8 cut(s)	71, 117, 805, 895, 1171, 1327, 1493, 1529
LmnI	GCTCC	6 cut(s)	4, 103, 382, 882, 1166, 1519
Lsp1109I	GCAGC	4 cut(s)	430, 478, 1132, 1517
LweI	GCATC	5 cut(s)	274, 465, 894, 1163, 1415
MaeI	CTAG	5 cut(s)	623, 645, 1325, 1410, 1515
MaeII	ACGT	1 cut(s)	276
MaeIII	GTNAC	4 cut(s)	146, 205, 1003, 1195
MalI	GATC	8 cut(s)	73, 119, 807, 897, 1173, 1329, 1495, 1531
MboI	GATC	8 cut(s)	71, 117, 805, 895, 1171, 1327, 1493, 1529
MboII	GAAGA	7 cut(s)	404, 680, 807, 988, 1433, 1488, 1573
MfeI	CAATTG	3 cut(s)	218, 564, 1434
MflI	RGATCY	4 cut(s)	71, 1171, 1327, 1493
MhlI	GDGCHC	5 cut(s)	9, 600, 654, 777, 922
MlsI	TGGCCA	2 cut(s)	24, 294
MluNI	TGGCCA	2 cut(s)	24, 294
MlyI	GAGTC	2 cut(s)	1082, 1203
MmeI	TCCRAC	1 cut(s)	665
MnlI	CCTC	8 cut(s)	249, 433, 829, 856, 970, 1242, 1417, 1547
Mox20I	TGGCCA	2 cut(s)	24, 294
MroXI	GAANNNNTTC	1 cut(s)	93
MscI	TGGCCA	2 cut(s)	24, 294
MseI	TTAA	5 cut(s)	63, 602, 705, 1377, 1490
MslI	CAYNNNNRTG	1 cut(s)	1205
Msp20I	TGGCCA	2 cut(s)	24, 294
MspA1I	CMGCKG	2 cut(s)	1139, 1320
MspI	CCGG	2 cut(s)	488, 1305
MspR9I	CCNGG	4 cut(s)	99, 381, 792, 935
MunI	CAATTG	3 cut(s)	218, 564, 1434
Mva1269I	GAATGC	1 cut(s)	756
MvaI	CCWGG	4 cut(s)	99, 381, 792, 935
MvnI	CGCG	1 cut(s)	1320
MwoI	GCNNNNNNNGC	4 cut(s)	120, 488, 1087, 1129
NcoI	CCATGG	1 cut(s)	1225
NdeII	GATC	8 cut(s)	71, 117, 805, 895, 1171, 1327, 1493, 1529
NheI	GCTAGC	1 cut(s)	622
NlaIII	CATG	9 cut(s)	362, 408, 576, 824, 877, 1229, 1243, 1264, 1366
NlaIV	GGNNCC	2 cut(s)	105, 1059
NmeAIII	GCCGAG	1 cut(s)	1577
NmuCI	GTSAC	3 cut(s)	146, 205, 1195
NspI	RCATGY	2 cut(s)	877, 1366
OliI	CACNNNNGTG	1 cut(s)	1205
PaeI	GCATGC	1 cut(s)	877
PagI	TCATGA	1 cut(s)	1260
PaqCI	CACCTGC	1 cut(s)	1045
PctI	GAATGC	1 cut(s)	756
PdmI	GAANNNNTTC	1 cut(s)	93
PfoI	TCCNGGA	2 cut(s)	379, 790
PinAI	ACCGGT	1 cut(s)	1304
PkrI	GCNGC	7 cut(s)	125, 445, 493, 621, 1122, 1319, 1507
PleI	GAGTC	2 cut(s)	1081, 1202
PpsI	GAGTC	2 cut(s)	1081, 1202
PpuMI	RGGWCCY	1 cut(s)	383
PshBI	ATTAAT	1 cut(s)	1377
Psp124BI	GAGCTC	2 cut(s)	654, 777
Psp5II	RGGWCCY	1 cut(s)	383
Psp6I	CCWGG	4 cut(s)	97, 379, 790, 933
PspEI	GGTNACC	1 cut(s)	205
PspGI	CCWGG	4 cut(s)	97, 379, 790, 933
PspN4I	GGNNCC	2 cut(s)	105, 1059
PspPI	GGNCC	1 cut(s)	383
PspPPI	RGGWCCY	1 cut(s)	383
PstI	CTGCAG	1 cut(s)	448
PstNI	CAGNNNCTG	1 cut(s)	536
PsuI	RGATCY	4 cut(s)	71, 1171, 1327, 1493
PvuII	CAGCTG	1 cut(s)	1139
RsaI	GTAC	1 cut(s)	1429
RsaNI	GTAC	1 cut(s)	1428
RseI	CAYNNNNRTG	1 cut(s)	1205
SacI	GAGCTC	2 cut(s)	654, 777
SacII	CCGCGG	1 cut(s)	1321
SaqAI	TTAA	5 cut(s)	63, 602, 705, 1377, 1490
SatI	GCNGC	7 cut(s)	124, 444, 492, 620, 1121, 1318, 1506
Sau3AI	GATC	8 cut(s)	71, 117, 805, 895, 1171, 1327, 1493, 1529
Sau96I	GGNCC	1 cut(s)	383
SchI	GAGTC	2 cut(s)	1082, 1203
ScrFI	CCNGG	4 cut(s)	99, 381, 792, 935
SduI	GDGCHC	5 cut(s)	9, 600, 654, 777, 922
SfaNI	GCATC	5 cut(s)	274, 465, 894, 1163, 1415
SfcI	CTRYAG	1 cut(s)	444
Sfr303I	CCGCGG	1 cut(s)	1321
SgrAI	CRCCGGYG	1 cut(s)	1304
SgrBI	CCGCGG	1 cut(s)	1321
SinI	GGWCC	1 cut(s)	383
SmiMI	CAYNNNNRTG	1 cut(s)	1205
SmlI	CTYRAG	1 cut(s)	1333
SmoI	CTYRAG	1 cut(s)	1333
SphI	GCATGC	1 cut(s)	877
SsiI	CCGC	7 cut(s)	92, 123, 416, 620, 754, 1318, 1320
SspMI	CTAG	5 cut(s)	623, 645, 1325, 1410, 1515
SstI	GAGCTC	2 cut(s)	654, 777
StyD4I	CCNGG	4 cut(s)	97, 379, 790, 933
StyI	CCWWGG	2 cut(s)	1225, 1514
TaaI	ACNGT	2 cut(s)	945, 1009
TaiI	ACGT	1 cut(s)	279
TaqI	TCGA	2 cut(s)	1076, 1101
TauI	GCSGC	3 cut(s)	126, 622, 1320
Tru1I	TTAA	5 cut(s)	63, 602, 705, 1377, 1490
Tru9I	TTAA	5 cut(s)	63, 602, 705, 1377, 1490
TscAI	CASTG	1 cut(s)	1207
TseFI	GTSAC	3 cut(s)	146, 205, 1195
TseI	GCWGC	4 cut(s)	443, 491, 1120, 1505
Tsp45I	GTSAC	3 cut(s)	146, 205, 1195
TspDTI	ATGAA	7 cut(s)	72, 347, 393, 468, 561, 1256, 1277
TspGWI	ACGGA	2 cut(s)	170, 315
TspRI	CASTG	1 cut(s)	1207
VpaK11BI	GGWCC	1 cut(s)	383
VspI	ATTAAT	1 cut(s)	1377
XbaI	TCTAGA	1 cut(s)	1409
XceI	RCATGY	2 cut(s)	877, 1366
XcmI	CCANNNNNNNNNTGG	1 cut(s)	217
XmaJI	CCTAGG	1 cut(s)	1514
XmiI	GTMKAC	1 cut(s)	658
XmnI	GAANNNNTTC	1 cut(s)	93
XspI	CTAG	5 cut(s)	623, 645, 1325, 1410, 1515

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.