Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0013476

Physical Location & Seq

Genomic Coordinates Reverse (-)

63277342 .. 63280536

Gene Structure 3195 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000020290

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1815 bp

ATGAGTTTCGGAAACTCAACTGTAAATGGCGCAGGGTTTGTTAATAGGCGATACCAGACGGCGGCGTTTTGGGGTTTTAAGGGTTTAACCGAGCGGCAGACGGCTACAGAGATGAAGCTTATCTCCGTGTCGTGTCCAAAGATATACGATGTGAACGGCACGATTCCCATCTCTTTAATAACTTCAAAGTATCCTCAAGCTCATACAATGGAACACGAGTACAAAGATGGCCAATGCAAGAGTTCAGTGATGGCAACATGCAGTGACGAAGTTAATGATAAAGTTAAAGAAAGATCCAGAGACCAAAGAGAACCTCTTCCAGGAGAGCCTAAATGTGTTATTTGCAGCCGTTATGGTGAGTATATTTGCGATCAGACAGATGATGATGTTTGCAGTTTGGAGTGTAAACAGACTCTGCTATGCAGGGTTGCCAACACCCAATTGGCAGTCAGTCACTCTCCTCCAAAACGATTACCTGCTAATGATGAGTGCCTTTATGTTAGAGATGCTGGTGGTCAGTCTGGAACTTCACTCTTAGCTGATGATCAGACTGAATTGCTTAGAAGTAGACTTGATATTCATGTGAAGGGTGACATAGTTGCAGGACCTATCTTGTCATTTGCTTCATGTAATCTTCCTCAAAAGCTTGTCCAAAATATAGAGGCTGCAGGTTATGAAATGCCCACACCTGTCCAGATGCAAGCAATTCCGGCTGCTTTGCATGGCAAAAACTTGCTTGTCTCTGCTGACACAGGCTCTGGTAAAACTGCTTCCTTTCTGGTTCCAATTGTTTCTTGTTGCTCGCATTTTCGCTTTGGACACTTGACGGACCAGAAAAAGCCGTTAGCTATGGTTCTAACTCCGACCAGAGAGCTCTGTATACAAGTTGAGGAACAAGCTAAGTTGCTTGGAAAGGGTTTGCCCTTTAAAACTGCACTTGTGGTTGGTGGCGACGCAATGCCCAGACAACTTTTCCGCATTCAGCAAGGAGTGGAGCTCATTGTGGGAACCCCGGGAAGACTAATTGATCTTTTAGCAAACCATGATATTGAACTGGAGGATATAAGGATTTTTGTTCTTGATGAGGTGGATTGCATGCTCCAAAGGGGCTTCCGGGATCAGGTGATGCAGATATTTAGGGCTCTATCACAACCCCAGGTTTTACTGTATTCTGCAACAATCTCCCAAGATATAGAGAAGATGGTGAGCTCTATGTCAAAAGATGTTGCTGTAATCTCTGTTGGCAAGCCTAATAGACCAAATAAGGCTGTGAAGCAGCTACCTATATGGGTTGAGTCGAAGCAAAAGAAGCAAAAGCTTTTCGATATATTGATGAGTAAGCAGCATTTTATGCCACCTGTTGTGGTTTATGTGGCATCAAGACTCGGGGCGGATCTGTTATCTAATGCAATTACAGTCACCACTGGTGTGAAAGCTTTATCAATCCATGGGGAGAAATCCATGAAGGAGAGGAGAGATATCATGAAGTCATTTTTAATGGGTGATGTTCCTGTGATTGTAGCCACCGGTGTTTTAGGCCGTGGGCTAGATCTCTTGGGTGTAAGACAGGTTATTGTTTTTGACATGCCTAATTCCATAAATGAGTATGTCCACCAGATTGGTAGGGCATCTAGATTAGGAGAAGAGGGTACAGCAATTGTGTTTGTATGTCAGGAGAATAAGAACTTGTTTCAAGAATTGGTTGAAATTTTAAGATCTTCTGGTGCAGCTATACCTAGGGAGCTTGTTAGATCACAGTATACGGCATGCCCATACTCCATTGGTCGAGGCCAGAAGAAAAGAAAGCATGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C zf-HIT

Protein Analysis

605

Amino Acids

66.71

Weight (kDa)

8.54

Isoelectric Point (pI)

42.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-HIT	PF04438	109 - 136	3.5e-07	HIT zinc finger
DEAD	PF00270	229 - 400	2.3e-43	DEAD/DEAH box helicase
Helicase_C	PF00271	436 - 547	1.1e-20	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013476)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02065 AT3G02065 AT3G02065
fragaria_vesca	FvH4_6g35850 FvH4_6g35850
malus_domestica	MD17G1003800.v1.1
pyrus_communis	pycom17g00050
rosa_chinensis	RchiOBHm_Chr2g0147891
rosa_laevigata	RLG00000020290
rosa_multiflora	Rmu_sc0000308.1_g000058
rosa_roxburghii	Rroxscaffold_2G00099220
rosa_rugosa	Rorug02G0402700 Rorug02G0402800
rosa_samantha	Rh2AG459700 Rh2BG473000 Rh2CG447000 Rh2DG481900
rosa_wichuraiana	Rw2G037600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	484, 659
AccBSI	CCGCTC	1 cut(s)	94
AccI	GTMKAC	3 cut(s)	568, 880, 1760
AciI	CCGC	4 cut(s)	62, 94, 976, 1391
AclWI	GGATC	3 cut(s)	288, 1125, 1401
AcoI	YGGCCR	1 cut(s)	229
AcsI	RAATTY	1 cut(s)	1707
AfaI	GTAC	2 cut(s)	221, 1651
AfiI	CCNNNNNNNGG	3 cut(s)	61, 320, 1120
AgeI	ACCGGT	1 cut(s)	1526
AgsI	TTSAA	4 cut(s)	186, 1052, 1694, 1706
AjnI	CCWGG	2 cut(s)	319, 1155
AleI	CACNNNNGTG	1 cut(s)	1427
Alw21I	GWGCWC	3 cut(s)	876, 999, 1211
Alw26I	GTCTC	2 cut(s)	294, 745
AlwI	GGATC	3 cut(s)	288, 1125, 1401
AlwNI	CAGNNNCTG	2 cut(s)	415, 758
Ama87I	CYCGRG	2 cut(s)	1012, 1385
AoxI	GGCC	3 cut(s)	229, 1537, 1789
ApeKI	GCWGC	6 cut(s)	345, 665, 713, 1276, 1342, 1727
ApoI	RAATTY	1 cut(s)	1707
AsiGI	ACCGGT	1 cut(s)	1526
Asp700I	GAANNNNTTC	1 cut(s)	315
AspA2I	CCTAGG	1 cut(s)	1736
AspLEI	GCGC	1 cut(s)	32
AspS9I	GGNCC	2 cut(s)	605, 829
AsuC2I	CCSGG	3 cut(s)	1013, 1014, 1115
AsuHPI	GGTGA	6 cut(s)	368, 602, 1135, 1216, 1411, 1514
AvaI	CYCGRG	2 cut(s)	1012, 1385
AvaII	GGWCC	2 cut(s)	605, 829
AvrII	CCTAGG	1 cut(s)	1736
BalI	TGGCCA	1 cut(s)	231
BanII	GRGCYC	4 cut(s)	876, 999, 1144, 1211
BarI	GAAGNNNNNNTAC	2 cut(s)	754, 786
BauI	CACGAG	1 cut(s)	215
BbsI	GAAGAC	1 cut(s)	1024
Bbv12I	GWGCWC	3 cut(s)	876, 999, 1211
BbvI	GCAGC	6 cut(s)	357, 652, 700, 1288, 1354, 1739
BccI	CCATC	4 cut(s)	176, 221, 244, 1195
BceAI	ACGGC	7 cut(s)	75, 117, 172, 333, 826, 1524, 1779
BciT130I	CCWGG	2 cut(s)	321, 1157
BciVI	GTATCC	1 cut(s)	201
BclI	TGATCA	1 cut(s)	544
BcnI	CCSGG	3 cut(s)	1013, 1014, 1115
BcoDI	GTCTC	2 cut(s)	294, 745
BfaI	CTAG	3 cut(s)	1547, 1632, 1737
BfmI	CTRYAG	2 cut(s)	105, 666
BfuAI	ACCTGC	2 cut(s)	484, 659
BfuI	GTATCC	1 cut(s)	201
BglII	AGATCT	2 cut(s)	1549, 1715
BisI	GCNGC	8 cut(s)	63, 95, 346, 666, 714, 1277, 1343, 1728
BlnI	CCTAGG	1 cut(s)	1736
BlsI	GCNGC	8 cut(s)	64, 96, 347, 667, 715, 1278, 1344, 1729
Bme1390I	CCNGG	5 cut(s)	321, 1013, 1014, 1115, 1157
Bme18I	GGWCC	2 cut(s)	605, 829
BmeT110I	CYCGRG	2 cut(s)	1012, 1385
BmgT120I	GGNCC	2 cut(s)	605, 829
BmiI	GGNNCC	2 cut(s)	783, 1009
BmrFI	CCNGG	5 cut(s)	321, 1013, 1014, 1115, 1157
BmsI	GCATC	5 cut(s)	496, 687, 1116, 1385, 1637
BpiI	GAAGAC	1 cut(s)	1024
BplI	GAGNNNNNCTC	2 cut(s)	981, 1013
BpmI	CTGGAG	1 cut(s)	1076
BpuEI	CTTGAG	1 cut(s)	180
BpuMI	CCSGG	3 cut(s)	1013, 1014, 1115
BsaBI	GATNNNNATC	1 cut(s)	167
BsaI	GGTCTC	1 cut(s)	294
BsaJI	CCNNGG	6 cut(s)	1011, 1012, 1155, 1447, 1540, 1736
BsaWI	WCCGGW	1 cut(s)	1526
Bsc4I	CCNNNNNNNGG	3 cut(s)	61, 320, 1120
Bse118I	RCCGGY	1 cut(s)	1526
Bse1I	ACTGG	2 cut(s)	1059, 1429
Bse3DI	GCAATG	1 cut(s)	963
Bse8I	GATNNNNATC	1 cut(s)	167
BseBI	CCWGG	2 cut(s)	321, 1157
BseDI	CCNNGG	6 cut(s)	1011, 1012, 1155, 1447, 1540, 1736
BseJI	GATNNNNATC	1 cut(s)	167
BseLI	CCNNNNNNNGG	3 cut(s)	61, 320, 1120
BseMI	GCAATG	1 cut(s)	963
BseNI	ACTGG	2 cut(s)	1059, 1429
BseRI	GAGGAG	2 cut(s)	450, 1486
BseXI	GCAGC	6 cut(s)	357, 652, 700, 1288, 1354, 1739
BsgI	GTGCAG	2 cut(s)	918, 1746
BshFI	GGCC	3 cut(s)	231, 1539, 1791
BshTI	ACCGGT	1 cut(s)	1526
BsiHKAI	GWGCWC	3 cut(s)	876, 999, 1211
BsiHKCI	CYCGRG	2 cut(s)	1012, 1385
BsiSI	CCGG	4 cut(s)	710, 1013, 1114, 1527
BslI	CCNNNNNNNGG	3 cut(s)	61, 320, 1120
BsmAI	GTCTC	2 cut(s)	294, 745
BsmI	GAATGC	1 cut(s)	978
BsnI	GGCC	3 cut(s)	231, 1539, 1791
Bso31I	GGTCTC	1 cut(s)	294
BsoBI	CYCGRG	2 cut(s)	1012, 1385
Bsp1286I	GDGCHC	4 cut(s)	876, 999, 1144, 1211
Bsp143I	GATC	9 cut(s)	293, 370, 544, 1027, 1117, 1393, 1549, 1715, 1751
Bsp19I	CCATGG	1 cut(s)	1447
BspACI	CCGC	4 cut(s)	62, 94, 976, 1391
BspANI	GGCC	3 cut(s)	231, 1539, 1791
BspHI	TCATGA	1 cut(s)	1482
BspLI	GGNNCC	2 cut(s)	783, 1009
BspMAI	CTGCAG	1 cut(s)	670
BspMI	ACCTGC	2 cut(s)	484, 659
BspPI	GGATC	3 cut(s)	288, 1125, 1401
BspTNI	GGTCTC	1 cut(s)	294
BsrBI	CCGCTC	1 cut(s)	94
BsrDI	GCAATG	1 cut(s)	963
BsrFI	RCCGGY	1 cut(s)	1526
BsrI	ACTGG	2 cut(s)	1059, 1429
BssAI	RCCGGY	1 cut(s)	1526
BssECI	CCNNGG	6 cut(s)	1011, 1012, 1155, 1447, 1540, 1736
BssMI	GATC	9 cut(s)	293, 370, 544, 1027, 1117, 1393, 1549, 1715, 1751
BssNAI	GTATAC	2 cut(s)	881, 1761
BssSI	CACGAG	1 cut(s)	215
BssT1I	CCWWGG	2 cut(s)	1447, 1736
Bst1107I	GTATAC	2 cut(s)	881, 1761
Bst2BI	CACGAG	1 cut(s)	215
Bst2UI	CCWGG	2 cut(s)	321, 1157
Bst4CI	ACNGT	4 cut(s)	22, 1167, 1417, 1758
Bst6I	CTCTTC	2 cut(s)	321, 1638
BstAPI	GCANNNNNTGC	1 cut(s)	1351
BstC8I	GCNNGC	5 cut(s)	702, 803, 1097, 1247, 1768
BstDEI	CTNAG	3 cut(s)	535, 560, 900
BstDSI	CCRYGG	2 cut(s)	1447, 1540
BstENI	CCTNNNNNAGG	1 cut(s)	318
BstHHI	GCGC	1 cut(s)	32
BstKTI	GATC	9 cut(s)	296, 373, 547, 1030, 1120, 1396, 1552, 1718, 1754
BstMAI	GTCTC	2 cut(s)	294, 745
BstMBI	GATC	9 cut(s)	293, 370, 544, 1027, 1117, 1393, 1549, 1715, 1751
BstMWI	GCNNNNNNNGC	3 cut(s)	710, 1309, 1351
BstNI	CCWGG	2 cut(s)	321, 1157
BstNSI	RCATGY	4 cut(s)	261, 1099, 1588, 1770
BstSCI	CCNGG	5 cut(s)	319, 1011, 1012, 1113, 1155
BstSFI	CTRYAG	2 cut(s)	105, 666
BstV1I	GCAGC	6 cut(s)	357, 652, 700, 1288, 1354, 1739
BstV2I	GAAGAC	1 cut(s)	1024
BstX2I	RGATCY	4 cut(s)	293, 1393, 1549, 1715
BstXI	CCANNNNNNTGG	1 cut(s)	1619
BstYI	RGATCY	4 cut(s)	293, 1393, 1549, 1715
BstZ17I	GTATAC	2 cut(s)	881, 1761
BsuI	GTATCC	1 cut(s)	201
BsuRI	GGCC	3 cut(s)	231, 1539, 1791
BtgI	CCRYGG	2 cut(s)	1447, 1540
BtsI	GCAGTG	1 cut(s)	268
BtsIMutI	CAGTG	3 cut(s)	252, 268, 1422
BveI	ACCTGC	2 cut(s)	484, 659
Cac8I	GCNNGC	5 cut(s)	702, 803, 1097, 1247, 1768
CaiI	CAGNNNCTG	2 cut(s)	415, 758
CciI	TCATGA	1 cut(s)	1482
CfoI	GCGC	1 cut(s)	32
Cfr10I	RCCGGY	1 cut(s)	1526
Cfr13I	GGNCC	2 cut(s)	605, 829
Cfr9I	CCCGGG	1 cut(s)	1012
CseI	GACGC	1 cut(s)	962
Csp6I	GTAC	2 cut(s)	220, 1650
CspAI	ACCGGT	1 cut(s)	1526
CviQI	GTAC	2 cut(s)	220, 1650
DdeI	CTNAG	3 cut(s)	535, 560, 900
DpnI	GATC	9 cut(s)	295, 372, 546, 1029, 1119, 1395, 1551, 1717, 1753
DpnII	GATC	9 cut(s)	293, 370, 544, 1027, 1117, 1393, 1549, 1715, 1751
DraI	TTTAAA	1 cut(s)	928
EaeI	YGGCCR	1 cut(s)	229
Eam1104I	CTCTTC	2 cut(s)	321, 1638
EarI	CTCTTC	2 cut(s)	321, 1638
EciI	GGCGGA	1 cut(s)	1406
Ecl136II	GAGCTC	3 cut(s)	874, 997, 1209
Eco130I	CCWWGG	2 cut(s)	1447, 1736
Eco24I	GRGCYC	4 cut(s)	876, 999, 1144, 1211
Eco31I	GGTCTC	1 cut(s)	294
Eco32I	GATATC	1 cut(s)	1480
Eco47I	GGWCC	2 cut(s)	605, 829
Eco53kI	GAGCTC	3 cut(s)	874, 997, 1209
Eco88I	CYCGRG	2 cut(s)	1012, 1385
EcoICRI	GAGCTC	3 cut(s)	874, 997, 1209
EcoNI	CCTNNNNNAGG	1 cut(s)	318
EcoO109I	RGGNCCY	1 cut(s)	605
EcoRII	CCWGG	2 cut(s)	319, 1155
EcoRV	GATATC	1 cut(s)	1480
EcoT14I	CCWWGG	2 cut(s)	1447, 1736
EcoT38I	GRGCYC	4 cut(s)	876, 999, 1144, 1211
ErhI	CCWWGG	2 cut(s)	1447, 1736
FbaI	TGATCA	1 cut(s)	544
FblI	GTMKAC	3 cut(s)	568, 880, 1760
Fnu4HI	GCNGC	8 cut(s)	63, 95, 346, 666, 714, 1277, 1343, 1728
FriOI	GRGCYC	4 cut(s)	876, 999, 1144, 1211
Fsp4HI	GCNGC	8 cut(s)	63, 95, 346, 666, 714, 1277, 1343, 1728
FspBI	CTAG	3 cut(s)	1547, 1632, 1737
GlaI	GCGC	1 cut(s)	31
GluI	GCNGC	8 cut(s)	63, 95, 346, 666, 714, 1277, 1343, 1728
GsuI	CTGGAG	1 cut(s)	1076
HaeIII	GGCC	3 cut(s)	231, 1539, 1791
HapII	CCGG	4 cut(s)	710, 1013, 1114, 1527
HgaI	GACGC	1 cut(s)	962
HhaI	GCGC	1 cut(s)	32
Hin6I	GCGC	1 cut(s)	30
HinP1I	GCGC	1 cut(s)	30
HindIII	AAGCTT	4 cut(s)	116, 644, 1316, 1434
HinfI	GANTC	4 cut(s)	163, 412, 1295, 1383
HpaII	CCGG	4 cut(s)	710, 1013, 1114, 1527
HphI	GGTGA	6 cut(s)	368, 602, 1135, 1216, 1411, 1514
Hpy166II	GTNNAC	6 cut(s)	154, 407, 569, 881, 1612, 1761
Hpy188I	TCNGA	4 cut(s)	11, 375, 549, 864
Hpy188III	TCNNGA	9 cut(s)	297, 522, 694, 1079, 1380, 1483, 1632, 1673, 1694
Hpy8I	GTNNAC	6 cut(s)	154, 407, 569, 881, 1612, 1761
Hpy99I	CGWCG	1 cut(s)	956
HpyAV	CCTTC	2 cut(s)	580, 1459
HpyCH4III	ACNGT	4 cut(s)	22, 1167, 1417, 1758
HpyF10VI	GCNNNNNNNGC	3 cut(s)	710, 1309, 1351
HpyF3I	CTNAG	3 cut(s)	535, 560, 900
HspAI	GCGC	1 cut(s)	30
Ksp22I	TGATCA	1 cut(s)	544
Kzo9I	GATC	9 cut(s)	293, 370, 544, 1027, 1117, 1393, 1549, 1715, 1751
LmnI	GCTCC	3 cut(s)	994, 1104, 1741
Lsp1109I	GCAGC	6 cut(s)	357, 652, 700, 1288, 1354, 1739
LweI	GCATC	5 cut(s)	496, 687, 1116, 1385, 1637
MaeI	CTAG	3 cut(s)	1547, 1632, 1737
MaeIII	GTNAC	4 cut(s)	263, 452, 590, 1417
MalI	GATC	9 cut(s)	295, 372, 546, 1029, 1119, 1395, 1551, 1717, 1753
MbiI	CCGCTC	1 cut(s)	94
MboI	GATC	9 cut(s)	293, 370, 544, 1027, 1117, 1393, 1549, 1715, 1751
MboII	GAAGA	7 cut(s)	308, 626, 1029, 1210, 1655, 1710, 1807
MfeI	CAATTG	3 cut(s)	440, 786, 1656
MflI	RGATCY	4 cut(s)	293, 1393, 1549, 1715
MhlI	GDGCHC	4 cut(s)	876, 999, 1144, 1211
MlsI	TGGCCA	1 cut(s)	231
MluNI	TGGCCA	1 cut(s)	231
MlyI	GAGTC	3 cut(s)	406, 1304, 1377
MmeI	TCCRAC	1 cut(s)	887
Mox20I	TGGCCA	1 cut(s)	231
MroXI	GAANNNNTTC	1 cut(s)	315
MscI	TGGCCA	1 cut(s)	231
MseI	TTAA	9 cut(s)	42, 78, 86, 176, 273, 285, 927, 1496, 1712
MslI	CAYNNNNRTG	1 cut(s)	1427
Msp20I	TGGCCA	1 cut(s)	231
MspI	CCGG	4 cut(s)	710, 1013, 1114, 1527
MspR9I	CCNGG	5 cut(s)	321, 1013, 1014, 1115, 1157
MunI	CAATTG	3 cut(s)	440, 786, 1656
Mva1269I	GAATGC	1 cut(s)	978
MvaI	CCWGG	2 cut(s)	321, 1157
MwoI	GCNNNNNNNGC	3 cut(s)	710, 1309, 1351
NciI	CCSGG	3 cut(s)	1013, 1014, 1115
NcoI	CCATGG	1 cut(s)	1447
NdeII	GATC	9 cut(s)	293, 370, 544, 1027, 1117, 1393, 1549, 1715, 1751
NlaIV	GGNNCC	2 cut(s)	783, 1009
NmuCI	GTSAC	4 cut(s)	263, 452, 590, 1417
NspI	RCATGY	4 cut(s)	261, 1099, 1588, 1770
OliI	CACNNNNGTG	1 cut(s)	1427
PaeI	GCATGC	2 cut(s)	1099, 1770
PagI	TCATGA	1 cut(s)	1482
PctI	GAATGC	1 cut(s)	978
PdmI	GAANNNNTTC	1 cut(s)	315
PfeI	GAWTC	1 cut(s)	163
PfoI	TCCNGGA	2 cut(s)	319, 1113
PinAI	ACCGGT	1 cut(s)	1526
PkrI	GCNGC	8 cut(s)	64, 96, 347, 667, 715, 1278, 1344, 1729
PleI	GAGTC	3 cut(s)	406, 1303, 1377
PpsI	GAGTC	3 cut(s)	406, 1303, 1377
PpuMI	RGGWCCY	1 cut(s)	605
Psp124BI	GAGCTC	3 cut(s)	876, 999, 1211
Psp5II	RGGWCCY	1 cut(s)	605
Psp6I	CCWGG	2 cut(s)	319, 1155
PspGI	CCWGG	2 cut(s)	319, 1155
PspN4I	GGNNCC	2 cut(s)	783, 1009
PspPI	GGNCC	2 cut(s)	605, 829
PspPPI	RGGWCCY	1 cut(s)	605
PstI	CTGCAG	1 cut(s)	670
PstNI	CAGNNNCTG	2 cut(s)	415, 758
PsuI	RGATCY	4 cut(s)	293, 1393, 1549, 1715
RsaI	GTAC	2 cut(s)	221, 1651
RsaNI	GTAC	2 cut(s)	220, 1650
RseI	CAYNNNNRTG	1 cut(s)	1427
SacI	GAGCTC	3 cut(s)	876, 999, 1211
SaqAI	TTAA	9 cut(s)	42, 78, 86, 176, 273, 285, 927, 1496, 1712
SatI	GCNGC	8 cut(s)	63, 95, 346, 666, 714, 1277, 1343, 1728
Sau3AI	GATC	9 cut(s)	293, 370, 544, 1027, 1117, 1393, 1549, 1715, 1751
Sau96I	GGNCC	2 cut(s)	605, 829
SchI	GAGTC	3 cut(s)	406, 1304, 1377
ScrFI	CCNGG	5 cut(s)	321, 1013, 1014, 1115, 1157
SduI	GDGCHC	4 cut(s)	876, 999, 1144, 1211
SfaNI	GCATC	5 cut(s)	496, 687, 1116, 1385, 1637
SfcI	CTRYAG	2 cut(s)	105, 666
SgrAI	CRCCGGYG	1 cut(s)	1526
SinI	GGWCC	2 cut(s)	605, 829
SmaI	CCCGGG	1 cut(s)	1014
SmiMI	CAYNNNNRTG	1 cut(s)	1427
SmlI	CTYRAG	1 cut(s)	195
SmoI	CTYRAG	1 cut(s)	195
SphI	GCATGC	2 cut(s)	1099, 1770
SsiI	CCGC	4 cut(s)	62, 94, 976, 1391
SspMI	CTAG	3 cut(s)	1547, 1632, 1737
SstI	GAGCTC	3 cut(s)	876, 999, 1211
StyD4I	CCNGG	5 cut(s)	319, 1011, 1012, 1113, 1155
StyI	CCWWGG	2 cut(s)	1447, 1736
TaaI	ACNGT	4 cut(s)	22, 1167, 1417, 1758
TaqI	TCGA	3 cut(s)	1298, 1323, 1786
TatI	WGTACW	1 cut(s)	219
TauI	GCSGC	2 cut(s)	65, 97
TfiI	GAWTC	1 cut(s)	163
Tru1I	TTAA	9 cut(s)	42, 78, 86, 176, 273, 285, 927, 1496, 1712
Tru9I	TTAA	9 cut(s)	42, 78, 86, 176, 273, 285, 927, 1496, 1712
TscAI	CASTG	3 cut(s)	252, 268, 1429
TseFI	GTSAC	4 cut(s)	263, 452, 590, 1417
TseI	GCWGC	6 cut(s)	345, 665, 713, 1276, 1342, 1727
Tsp45I	GTSAC	4 cut(s)	263, 452, 590, 1417
TspDTI	ATGAA	6 cut(s)	128, 569, 615, 690, 1478, 1499
TspGWI	ACGGA	2 cut(s)	115, 842
TspMI	CCCGGG	1 cut(s)	1012
TspRI	CASTG	3 cut(s)	252, 268, 1429
VpaK11BI	GGWCC	2 cut(s)	605, 829
XagI	CCTNNNNNAGG	1 cut(s)	318
XapI	RAATTY	1 cut(s)	1707
XbaI	TCTAGA	1 cut(s)	1631
XceI	RCATGY	4 cut(s)	261, 1099, 1588, 1770
XcmI	CCANNNNNNNNNTGG	1 cut(s)	439
XmaI	CCCGGG	1 cut(s)	1012
XmaJI	CCTAGG	1 cut(s)	1736
XmiI	GTMKAC	3 cut(s)	568, 880, 1760
XmnI	GAANNNNTTC	1 cut(s)	315
XspI	CTAG	3 cut(s)	1547, 1632, 1737

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.