FvH4_6g36340

Complex I intermediate-associated protein 30 (CIA30)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0005280
Physical Location & Seq
Forward (+)
28592619 .. 28597341
4723 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g36340.t7

Sequence Viewer

Length: 1773 bp
ATGACTGCTGCCACTACAGCCATTAGTAGCAACAGCTTGAGCAACAGTCCTAACCATTACCAGTGGTGCAGTCAGACATCTTGGAGATCAATCTCGTTACCGATTCCAAAACCCAGTTGCCAGAACTTGACAATCGCCGCCAGGAACCGCTCATCCTCACTGATTCCTAGAGCCACCGGGGATTCCTCGCCGGAGCCGGAAAATGGAGGAAGCAAGAAAATTAAGACCAAGACAAAAACAACAGCTGGCAGTACTAGTTCTGATGAGAAGAGTGAGGTTGTTAGTGAGGTGCTGACAGAGAAAGAGCAGAAGCAGAAGCAGCAGAGGAGGCTGGAGCTGGAGGACGTGAACCCAGTTGGGCTGGGAAGGAGATCACGTCAGCTTTTTGATGAAGTGTGGCGCAAGTTTTCTGGACTTGGGCAGATCTCTAGGACTAGCTTACCGGATGAGAGAGACGCCCTTGATGCTCTTCTCATTAGGGAAGGTCCCATGTGTGAGTTTGTCATTCCCGGAGCTCAGAACACCACCGTTTTGGTCGTTGGAGCTACGTCTAAGATTGGCCGGATAGTTGTCCGGAAGCTTATGCTCAGAGGCTACACTGTTAAGGCTCTGGTGAGGAAGGCGGATGAGGAAGTGGTGGAGATGTTGCCGAGGTCGGTAGAGATTGTGATTGGAGATGTGGGTGAGCCGGATAGTTTAAGAGCCGCGGTACAGGGCTGCAACAAGATCATATACTGCGCTACCGCACGGTCTACTATTAGTGGAGACCTGTATAGGGTTGATAATAGAGGAGTCTACAACCTCACCAAAGCATTTCAGGATTATAACAACAAACTTGCACAATTACGAGCAGGAAAAAGTAGCAAGAGCAAGCTTACGCTGGCTAAATTCAAGAATCCAGAGTCGGTAAATGGATGGGAAGTTTATAAGGGGACTTATTTCCAGGATGTGGTTGCTTCCAAGTATGATGGAGGCATGGATGCTAAATTTGAATTCACTTTTACTGGAGATGCGGTTTTCTCAGGATATGTTTTCACTAGGGGAGGGTATGTTGAAATGTCAACAAAGCTTTCACTTCCTTTGGGCTGCACTCTTGACAGGTATGAAGGTCTAGTTCTTTCTGTTGGGGGGAATGGAAGGGCTTATATATTAATTCTTGAAGCCGGCCCTTCAGCAGATACATCTCAAAGTAAACTATATTTTGCAAGATTTAACACAAAAGCAGGATTTTGTAGGGTCAGGGTACCATTTTCATCCTTCAGACCGGTGAAACCAGATGATCCGCCATTGGATCCGTTCCTTGTACATACATTAACTATACGTTTTGAACCCAGAAGACAGAAAGCTGTTGAAGCACGTCCGGGAGATCAGAAGCAAGACCCCAGAAGCTTTAAGCTTATACTGGAGTACATTAAAGCTTTACCTGCTGGTCAAGAAACTGACTTCATTCTAGTTTCATGTACGGGATCAGGAATAGAACCTAATAGAAGGGAGCAAGTTCTTAAAGCCAAGAGGGCTGGGGAAGATTCATTGCGAAGATCAGGGGTTGGATACACAATTATTCGACCTGGTCCTCTGAAGGAAGAACCTGGCGGACAACGTGCTCTCATATTTGATCAGGGAAACAGGATTTCTCAGGGGATCAGCTGTGCTGATGTAGCTGATATCTGTGTGAAGGCATTGCATGATTCAACTGCAAGGAACAAAAGCTTTGATGGAAGGAACTCTATGAGCTGGTTGCACATTTGCCAGACAAAGCAAATAATTATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CIA30 NAD_binding_10

Protein Analysis

591

Amino Acids

65.08

Weight (kDa)

9.43

Isoelectric Point (pI)

45.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NmrA PF05368 174 - 248 8.6e-11 NmrA-like family
Epimerase PF01370 177 - 277 2.6e-06 NAD dependent epimerase/dehydratase family
NAD_binding_10 PF13460 181 - 274 1.6e-12 NAD(P)H-binding
CIA30 PF08547 297 - 417 2.4e-07 Complex I intermediate-associated protein 30 (CIA30)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 825, 927
Acc36I ACCTGC 1 cut(s) 1432
Acc65I GGTACC 1 cut(s) 1243
AccB1I GGYRCC 1 cut(s) 1243
AccB7I CCANNNNNTGG 1 cut(s) 949
AccBSI CCGCTC 1 cut(s) 150
AccI GTMKAC 2 cut(s) 752, 795
AccII CGCG 1 cut(s) 707
AccIII TCCGGA 1 cut(s) 573
AciI CCGC 9 cut(s) 138, 148, 623, 705, 707, 744, 1013, 1283, 1593
AclWI GGATC 5 cut(s) 1274, 1286, 1299, 1474, 1649
AcoI YGGCCR 1 cut(s) 559
AcsI RAATTY 3 cut(s) 887, 986, 992
AcuI CTGAAG 3 cut(s) 1155, 1243, 1598
AcyI GRCGYC 1 cut(s) 456
AfaI GTAC 6 cut(s) 253, 711, 1245, 1305, 1409, 1462
AfiI CCNNNNNNNGG 3 cut(s) 203, 775, 949
AgeI ACCGGT 1 cut(s) 1264
AgsI TTSAA 7 cut(s) 892, 992, 1055, 1160, 1328, 1352, 1692
AhlI ACTAGT 1 cut(s) 254
AjiI CACGTC 3 cut(s) 346, 377, 1358
AjnI CCWGG 4 cut(s) 140, 942, 1567, 1588
AloI GAACNNNNNNTCC 2 cut(s) 137, 169
Alw21I GWGCWC 2 cut(s) 517, 1606
Alw26I GTCTC 2 cut(s) 447, 759
AlwI GGATC 5 cut(s) 1274, 1286, 1299, 1474, 1649
Aor13HI TCCGGA 1 cut(s) 573
AoxI GGCC 2 cut(s) 559, 1165
ApeKI GCWGC 4 cut(s) 8, 319, 717, 1086
ApoI RAATTY 3 cut(s) 887, 986, 992
AseI ATTAAT 1 cut(s) 1151
AsiGI ACCGGT 1 cut(s) 1264
Asp718I GGTACC 1 cut(s) 1243
AspLEI GCGC 2 cut(s) 402, 740
AspS9I GGNCC 3 cut(s) 485, 1166, 1571
AsuC2I CCSGG 3 cut(s) 178, 510, 1362
AsuHPI GGTGA 4 cut(s) 625, 695, 796, 1279
AvaII GGWCC 2 cut(s) 485, 1571
BamHI GGATCC 1 cut(s) 1291
BanI GGYRCC 1 cut(s) 1243
BanII GRGCYC 1 cut(s) 517
BbsI GAAGAC 1 cut(s) 1342
Bbv12I GWGCWC 2 cut(s) 517, 1606
BbvI GCAGC 3 cut(s) 331, 704, 1073
BccI CCATC 3 cut(s) 909, 962, 1709
BciT130I CCWGG 4 cut(s) 142, 944, 1569, 1590
BciVI GTATCC 1 cut(s) 1544
BclI TGATCA 1 cut(s) 1615
BcnI CCSGG 3 cut(s) 178, 510, 1362
BcoDI GTCTC 2 cut(s) 447, 759
BcuI ACTAGT 1 cut(s) 254
BfaI CTAG 7 cut(s) 168, 255, 429, 435, 1038, 1112, 1451
BfmI CTRYAG 1 cut(s) 15
BfuAI ACCTGC 1 cut(s) 1432
BfuI GTATCC 1 cut(s) 1544
BglI GCCNNNNNGGC 1 cut(s) 1514
BglII AGATCT 1 cut(s) 423
BisI GCNGC 6 cut(s) 9, 138, 320, 705, 718, 1087
BlsI GCNGC 6 cut(s) 10, 139, 321, 706, 719, 1088
BmcAI AGTACT 1 cut(s) 253
Bme1390I CCNGG 7 cut(s) 142, 178, 510, 944, 1362, 1569, 1590
Bme18I GGWCC 2 cut(s) 485, 1571
BmgBI CACGTC 3 cut(s) 346, 377, 1358
BmgT120I GGNCC 3 cut(s) 485, 1166, 1571
BmiI GGNNCC 5 cut(s) 146, 195, 487, 1245, 1293
BmrFI CCNGG 7 cut(s) 142, 178, 510, 944, 1362, 1569, 1590
BmrI ACTGGG 2 cut(s) 108, 347
BmsI GCATC 3 cut(s) 454, 970, 1000
BmuI ACTGGG 2 cut(s) 108, 347
BpiI GAAGAC 1 cut(s) 1342
BpmI CTGGAG 4 cut(s) 353, 359, 1026, 1424
BpuEI CTTGAG 1 cut(s) 58
BpuMI CCSGG 3 cut(s) 178, 510, 1362
BsaHI GRCGYC 1 cut(s) 456
BsaI GGTCTC 1 cut(s) 759
BsaJI CCNNGG 3 cut(s) 177, 650, 705
BsaWI WCCGGW 3 cut(s) 442, 573, 1264
BsaXI ACNNNNNCTCC 6 cut(s) 361, 391, 999, 1029, 1035, 1065
Bsc4I CCNNNNNNNGG 3 cut(s) 203, 775, 949
Bse118I RCCGGY 2 cut(s) 1163, 1264
Bse1I ACTGG 5 cut(s) 61, 114, 353, 1009, 1407
Bse3DI GCAATG 2 cut(s) 1529, 1679
BseAI TCCGGA 1 cut(s) 573
BseBI CCWGG 4 cut(s) 142, 944, 1569, 1590
BseDI CCNNGG 3 cut(s) 177, 650, 705
BseGI GGATG 7 cut(s) 152, 451, 631, 920, 952, 985, 1253
BseLI CCNNNNNNNGG 3 cut(s) 203, 775, 949
BseMI GCAATG 2 cut(s) 1529, 1679
BseMII CTCAG 4 cut(s) 530, 601, 1035, 1649
BseNI ACTGG 5 cut(s) 61, 114, 353, 1009, 1407
BseRI GAGGAG 2 cut(s) 340, 804
BseXI GCAGC 3 cut(s) 331, 704, 1073
BseYI CCCAGC 2 cut(s) 361, 1517
BsgI GTGCAG 2 cut(s) 88, 1072
Bsh1236I CGCG 1 cut(s) 707
BshFI GGCC 2 cut(s) 561, 1167
BshNI GGYRCC 1 cut(s) 1243
BshTI ACCGGT 1 cut(s) 1264
BsiHKAI GWGCWC 2 cut(s) 517, 1606
BslFI GGGAC 2 cut(s) 471, 946
BslI CCNNNNNNNGG 3 cut(s) 203, 775, 949
BsmAI GTCTC 2 cut(s) 447, 759
BsmBI CGTCTC 1 cut(s) 447
BsmFI GGGAC 2 cut(s) 471, 946
BsnI GGCC 2 cut(s) 561, 1167
Bso31I GGTCTC 1 cut(s) 759
Bsp1286I GDGCHC 2 cut(s) 517, 1606
Bsp13I TCCGGA 1 cut(s) 573
Bsp1407I TGTACA 1 cut(s) 1303
BspACI CCGC 9 cut(s) 138, 148, 623, 705, 707, 744, 1013, 1283, 1593
BspANI GGCC 2 cut(s) 561, 1167
BspCNI CTCAG 4 cut(s) 529, 600, 1034, 1648
BspEI TCCGGA 1 cut(s) 573
BspFNI CGCG 1 cut(s) 707
BspLI GGNNCC 5 cut(s) 146, 195, 487, 1245, 1293
BspMI ACCTGC 1 cut(s) 1432
BspPI GGATC 5 cut(s) 1274, 1286, 1299, 1474, 1649
BspQI GCTCTTC 1 cut(s) 474
BspT107I GGYRCC 1 cut(s) 1243
BspTNI GGTCTC 1 cut(s) 759
BsrBI CCGCTC 1 cut(s) 150
BsrDI GCAATG 2 cut(s) 1529, 1679
BsrFI RCCGGY 2 cut(s) 1163, 1264
BsrGI TGTACA 1 cut(s) 1303
BsrI ACTGG 5 cut(s) 61, 114, 353, 1009, 1407
BssAI RCCGGY 2 cut(s) 1163, 1264
BssECI CCNNGG 3 cut(s) 177, 650, 705
BssNI GRCGYC 1 cut(s) 456
Bst2UI CCWGG 4 cut(s) 142, 944, 1569, 1590
Bst4CI ACNGT 4 cut(s) 47, 529, 601, 750
Bst6I CTCTTC 2 cut(s) 263, 474
BstACI GRCGYC 1 cut(s) 456
BstAUI TGTACA 1 cut(s) 1303
BstC8I GCNNGC 4 cut(s) 247, 872, 882, 1165
BstDEI CTNAG 5 cut(s) 516, 552, 587, 1021, 1635
BstDSI CCRYGG 1 cut(s) 705
BstF5I GGATG 7 cut(s) 152, 451, 631, 920, 952, 985, 1253
BstFNI CGCG 1 cut(s) 707
BstHHI GCGC 2 cut(s) 402, 740
BstMAI GTCTC 2 cut(s) 447, 759
BstMWI GCNNNNNNNGC 8 cut(s) 17, 319, 328, 464, 1352, 1424, 1514, 1658
BstNI CCWGG 4 cut(s) 142, 944, 1569, 1590
BstSCI CCNGG 7 cut(s) 140, 176, 508, 942, 1360, 1567, 1588
BstSFI CTRYAG 1 cut(s) 15
BstUI CGCG 1 cut(s) 707
BstV1I GCAGC 3 cut(s) 331, 704, 1073
BstV2I GAAGAC 1 cut(s) 1342
BstX2I RGATCY 2 cut(s) 423, 1291
BstXI CCANNNNNNTGG 1 cut(s) 532
BstYI RGATCY 2 cut(s) 423, 1291
BsuI GTATCC 1 cut(s) 1544
BsuRI GGCC 2 cut(s) 561, 1167
BtgI CCRYGG 1 cut(s) 705
BtrI CACGTC 3 cut(s) 346, 377, 1358
BtsCI GGATG 7 cut(s) 152, 451, 631, 920, 952, 985, 1253
BtsIMutI CAGTG 3 cut(s) 68, 158, 597
BveI ACCTGC 1 cut(s) 1432
Cac8I GCNNGC 4 cut(s) 247, 872, 882, 1165
CfoI GCGC 2 cut(s) 402, 740
Cfr10I RCCGGY 2 cut(s) 1163, 1264
Cfr13I GGNCC 3 cut(s) 485, 1166, 1571
Cfr42I CCGCGG 1 cut(s) 708
CseI GACGC 1 cut(s) 464
CsiI ACCWGGT 1 cut(s) 1567
Csp6I GTAC 6 cut(s) 252, 710, 1244, 1304, 1408, 1461
CspAI ACCGGT 1 cut(s) 1264
CviAII CATG 4 cut(s) 490, 976, 1458, 1685
CviQI GTAC 6 cut(s) 252, 710, 1244, 1304, 1408, 1461
DdeI CTNAG 5 cut(s) 516, 552, 587, 1021, 1635
EaeI YGGCCR 1 cut(s) 559
Eam1104I CTCTTC 2 cut(s) 263, 474
EarI CTCTTC 2 cut(s) 263, 474
EciI GGCGGA 3 cut(s) 638, 1272, 1608
Ecl136II GAGCTC 1 cut(s) 515
Eco24I GRGCYC 1 cut(s) 517
Eco31I GGTCTC 1 cut(s) 759
Eco32I GATATC 1 cut(s) 1666
Eco47I GGWCC 2 cut(s) 485, 1571
Eco53kI GAGCTC 1 cut(s) 515
Eco57I CTGAAG 3 cut(s) 1155, 1243, 1598
EcoICRI GAGCTC 1 cut(s) 515
EcoO109I RGGNCCY 1 cut(s) 485
EcoRI GAATTC 1 cut(s) 992
EcoRII CCWGG 4 cut(s) 140, 942, 1567, 1588
EcoRV GATATC 1 cut(s) 1666
EcoT38I GRGCYC 1 cut(s) 517
Esp3I CGTCTC 1 cut(s) 447
FaeI CATG 4 cut(s) 493, 979, 1461, 1688
FaqI GGGAC 2 cut(s) 471, 946
FatI CATG 4 cut(s) 489, 975, 1457, 1684
FbaI TGATCA 1 cut(s) 1615
FblI GTMKAC 2 cut(s) 752, 795
Fnu4HI GCNGC 6 cut(s) 9, 138, 320, 705, 718, 1087
FokI GGATG 7 cut(s) 139, 458, 638, 927, 959, 992, 1240
FriOI GRGCYC 1 cut(s) 517
Fsp4HI GCNGC 6 cut(s) 9, 138, 320, 705, 718, 1087
FspBI CTAG 7 cut(s) 168, 255, 429, 435, 1038, 1112, 1451
GlaI GCGC 2 cut(s) 401, 739
GluI GCNGC 6 cut(s) 9, 138, 320, 705, 718, 1087
GsaI CCCAGC 2 cut(s) 365, 1521
GsuI CTGGAG 4 cut(s) 353, 359, 1026, 1424
HaeIII GGCC 2 cut(s) 561, 1167
HgaI GACGC 1 cut(s) 464
HhaI GCGC 2 cut(s) 402, 740
Hin1I GRCGYC 1 cut(s) 456
Hin1II CATG 4 cut(s) 493, 979, 1461, 1688
Hin6I GCGC 2 cut(s) 400, 738
HinP1I GCGC 2 cut(s) 400, 738
HincII GTYRAC 1 cut(s) 1062
HindII GTYRAC 1 cut(s) 1062
HindIII AAGCTT 7 cut(s) 578, 872, 1067, 1387, 1394, 1416, 1708
HinfI GANTC 8 cut(s) 103, 163, 182, 792, 895, 902, 1526, 1688
HphI GGTGA 4 cut(s) 625, 695, 796, 1279
Hpy166II GTNNAC 5 cut(s) 349, 753, 796, 1062, 1193
Hpy188I TCNGA 8 cut(s) 75, 262, 519, 590, 1262, 1371, 1578, 1772
Hpy8I GTNNAC 5 cut(s) 349, 753, 796, 1062, 1193
HpyCH4III ACNGT 4 cut(s) 47, 529, 601, 750
HpyCH4IV ACGT 6 cut(s) 345, 376, 548, 1321, 1357, 1600
HpyCH4V TGCA 8 cut(s) 69, 720, 839, 1089, 1205, 1684, 1697, 1741
HpyF10VI GCNNNNNNNGC 8 cut(s) 17, 319, 328, 464, 1352, 1424, 1514, 1658
HpyF3I CTNAG 5 cut(s) 516, 552, 587, 1021, 1635
HpySE526I ACGT 6 cut(s) 345, 376, 548, 1321, 1357, 1600
Hsp92I GRCGYC 1 cut(s) 456
Hsp92II CATG 4 cut(s) 493, 979, 1461, 1688
HspAI GCGC 2 cut(s) 400, 738
Kpn2I TCCGGA 1 cut(s) 573
KpnI GGTACC 1 cut(s) 1247
KroI GCCGGC 1 cut(s) 1163
KroNI GCCGGC 1 cut(s) 1165
Ksp22I TGATCA 1 cut(s) 1615
KspI CCGCGG 1 cut(s) 708
LguI GCTCTTC 1 cut(s) 474
LmnI GCTCC 5 cut(s) 193, 334, 512, 542, 1492
Lsp1109I GCAGC 3 cut(s) 331, 704, 1073
LweI GCATC 3 cut(s) 454, 970, 1000
MabI ACCWGGT 1 cut(s) 1567
MaeI CTAG 7 cut(s) 168, 255, 429, 435, 1038, 1112, 1451
MaeII ACGT 6 cut(s) 345, 376, 548, 1321, 1357, 1600
MaeIII GTNAC 1 cut(s) 96
MbiI CCGCTC 1 cut(s) 150
MboII GAAGA 6 cut(s) 280, 461, 1347, 1535, 1548, 1595
MflI RGATCY 2 cut(s) 423, 1291
MhlI GDGCHC 2 cut(s) 517, 1606
MluCI AATT 8 cut(s) 219, 842, 887, 986, 992, 1152, 1557, 1764
MlyI GAGTC 2 cut(s) 801, 911
MmeI TCCRAC 2 cut(s) 520, 1528
MroI TCCGGA 1 cut(s) 573
MroNI GCCGGC 1 cut(s) 1163
MseI TTAA 9 cut(s) 222, 603, 698, 1151, 1212, 1313, 1392, 1413, 1503
MspA1I CMGCKG 3 cut(s) 245, 707, 1647
MspR9I CCNGG 7 cut(s) 142, 178, 510, 944, 1362, 1569, 1590
MvaI CCWGG 4 cut(s) 142, 944, 1569, 1590
MvnI CGCG 1 cut(s) 707
MwoI GCNNNNNNNGC 8 cut(s) 17, 319, 328, 464, 1352, 1424, 1514, 1658
NaeI GCCGGC 1 cut(s) 1165
NciI CCSGG 3 cut(s) 178, 510, 1362
NgoMIV GCCGGC 1 cut(s) 1163
NlaIII CATG 4 cut(s) 493, 979, 1461, 1688
NlaIV GGNNCC 5 cut(s) 146, 195, 487, 1245, 1293
NmeAIII GCCGAG 1 cut(s) 675
PciSI GCTCTTC 1 cut(s) 474
PdiI GCCGGC 1 cut(s) 1165
PfeI GAWTC 6 cut(s) 103, 163, 182, 895, 1526, 1688
PflFI GACNNNGTC 1 cut(s) 1569
PflMI CCANNNNNTGG 1 cut(s) 949
PfoI TCCNGGA 3 cut(s) 508, 942, 1360
PinAI ACCGGT 1 cut(s) 1264
PkrI GCNGC 6 cut(s) 10, 139, 321, 706, 719, 1088
PleI GAGTC 2 cut(s) 800, 910
PpsI GAGTC 2 cut(s) 800, 910
PpuMI RGGWCCY 1 cut(s) 485
PshBI ATTAAT 1 cut(s) 1151
PsiI TTATAA 2 cut(s) 825, 927
Psp124BI GAGCTC 1 cut(s) 517
Psp5II RGGWCCY 1 cut(s) 485
Psp6I CCWGG 4 cut(s) 140, 942, 1567, 1588
PspFI CCCAGC 2 cut(s) 361, 1517
PspGI CCWGG 4 cut(s) 140, 942, 1567, 1588
PspN4I GGNNCC 5 cut(s) 146, 195, 487, 1245, 1293
PspPI GGNCC 3 cut(s) 485, 1166, 1571
PspPPI RGGWCCY 1 cut(s) 485
PsuI RGATCY 2 cut(s) 423, 1291
PsyI GACNNNGTC 1 cut(s) 1569
PvuII CAGCTG 2 cut(s) 245, 1647
RsaI GTAC 6 cut(s) 253, 711, 1245, 1305, 1409, 1462
RsaNI GTAC 6 cut(s) 252, 710, 1244, 1304, 1408, 1461
SacI GAGCTC 1 cut(s) 517
SacII CCGCGG 1 cut(s) 708
SapI GCTCTTC 1 cut(s) 474
SaqAI TTAA 9 cut(s) 222, 603, 698, 1151, 1212, 1313, 1392, 1413, 1503
SatI GCNGC 6 cut(s) 9, 138, 320, 705, 718, 1087
Sau96I GGNCC 3 cut(s) 485, 1166, 1571
ScaI AGTACT 1 cut(s) 253
SchI GAGTC 2 cut(s) 801, 911
ScrFI CCNGG 7 cut(s) 142, 178, 510, 944, 1362, 1569, 1590
SduI GDGCHC 2 cut(s) 517, 1606
SexAI ACCWGGT 1 cut(s) 1567
SfaNI GCATC 3 cut(s) 454, 970, 1000
SfcI CTRYAG 1 cut(s) 15
Sfr303I CCGCGG 1 cut(s) 708
SgrBI CCGCGG 1 cut(s) 708
SinI GGWCC 2 cut(s) 485, 1571
SmlI CTYRAG 1 cut(s) 37
SmoI CTYRAG 1 cut(s) 37
SpeI ACTAGT 1 cut(s) 254
Sse9I AATT 8 cut(s) 219, 842, 887, 986, 992, 1152, 1557, 1764
SsiI CCGC 9 cut(s) 138, 148, 623, 705, 707, 744, 1013, 1283, 1593
SspMI CTAG 7 cut(s) 168, 255, 429, 435, 1038, 1112, 1451
SstI GAGCTC 1 cut(s) 517
StyD4I CCNGG 7 cut(s) 140, 176, 508, 942, 1360, 1567, 1588
TaaI ACNGT 4 cut(s) 47, 529, 601, 750
TaiI ACGT 6 cut(s) 348, 379, 551, 1324, 1360, 1603
TaqI TCGA 1 cut(s) 1564
TasI AATT 8 cut(s) 219, 842, 887, 986, 992, 1152, 1557, 1764
TatI WGTACW 3 cut(s) 251, 1303, 1407
TauI GCSGC 2 cut(s) 140, 707
TfiI GAWTC 6 cut(s) 103, 163, 182, 895, 1526, 1688
Tru1I TTAA 9 cut(s) 222, 603, 698, 1151, 1212, 1313, 1392, 1413, 1503
Tru9I TTAA 9 cut(s) 222, 603, 698, 1151, 1212, 1313, 1392, 1413, 1503
TscAI CASTG 3 cut(s) 68, 165, 604
TseI GCWGC 4 cut(s) 8, 319, 717, 1086
TspDTI ATGAA 6 cut(s) 405, 1119, 1242, 1435, 1446, 1518
TspGWI ACGGA 1 cut(s) 1284
TspRI CASTG 3 cut(s) 68, 165, 604
Tth111I GACNNNGTC 1 cut(s) 1569
Van91I CCANNNNNTGG 1 cut(s) 949
VpaK11BI GGWCC 2 cut(s) 485, 1571
VspI ATTAAT 1 cut(s) 1151
XapI RAATTY 3 cut(s) 887, 986, 992
XmiI GTMKAC 2 cut(s) 752, 795
XspI CTAG 7 cut(s) 168, 255, 429, 435, 1038, 1112, 1451
ZrmI AGTACT 1 cut(s) 253
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.