Rroxscaffold_2G00098850

Complex I intermediate-associated protein 30 (CIA30)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0005280
Physical Location & Seq
Reverse (-)
20279367 .. 20283978
4612 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00098850.1

Sequence Viewer

Length: 1851 bp
ATGACTACTGCCACTAGAGCCATTAGTAGCAACAGCTTGAGCAATAGTCCTAACCATTACCAGTGGGGCAGTCAGACATCTTGGAGATCCATTGCGCTGCCAATCCCGAAACCCAGTTGCCAGAACTTGACAATCGCCACCAGGAACCGATCATCGTCCTTGATTACTAGAGCCTCTGGGGATTCCTCACCGGAGCCGGAAAATGAAGGAAGCAAGAATACCAAGACCAAGACCAAGATCACAACAGTTGGTGGTACTAGTGCTGCTTCTGATGAGAAGAAGAAGAAGAGTGAGGTTGTTAGTGAAGTGCTGACAGAGAAAGAGCAGATGCAGAAGCAGCAGAGGAGGCTGGAGCTGGAAGACGTCAACCCAGTTGGGCTGGGTCGGAGATCACGCCAGTTGTTTGATGAAGTGTGGCGCAAGTTTTCTGGGCTGGGGCAGATCTCAAGGACTAGCTTACCCGATGAAAGAGACGCCCTTGATGCTCTTCTCATCAGGGAAGGTCCCATGTGCGAGTTTGTTATTCCCGGAGCCCAAAACACCACGGTTTTGGTAGTCGGAGCTACGTCTAAGATCGGCCGGATAGTTGTCCGCAAGCTTATGCTCAGAGGCTACACGGTTAAGGCTCTGGTGAGGAAGGCGGATCAGGAAGTGGTGGACATGTTGCCGAGGTCGGTGGAGATTGTGATTGGGGATGTGGGTGAGCCGGATAGTCTAAGAGCCGCCGTACAGGGCTGCAACAAGATCATATACTGTGCAACTGCACGGTCTACTATTAGTGGAGACCTCTACAGGGTTGATAATAGAGGAGTCTACAACCTCACTAAAGCATTTCAGGACTATAACAACAAACTTGCGCAATTACGAGCAGGAAAAAGTAGCAAAAGCAAGCTCACGCTTGCTAAGTTCAAGAATCCGGATTCAGTAAATGGATGGGAAGTTTATAAGGGGACTTATTTCCAGGATGTGGTTGCTTCCAAGTATGATGGAGGCATGGATGCTAAATTCGAATTCACTTTTACTGGAGATGCGGTTTTCTCAGGATATGTTTTCACTAGGGGAGGGTATGTTGAACTATCAACAAAGCTTTCACTTCCTTTGGGAAGCACTCTTGACCGGTATGAAGGTCTGGTTCTTTCTGTTGGTGGGAATGGAAGGGCTTATATATTAATTCTTGAAGCTGGTCCTTCGGCAGATACATCTCAAAGTAAACTATATTTTGCAAGATTTAACACAAAAGCGGGATTTTGTAGGGTCAGGGTACCATTTTCATCCTTCAGGCCAGTGAAACCTGATGATCCGCCATTGGATCCATTCCTTGTACATACATTAACTATACGTTTTGAGCCCAGAAGACAGAAAGCTGTTGAAGCACGTCCAGGAGAGAAGCAAGACCCCAGAAGCTTTAAGCTTATATTGGAGTACATCAAAGCTTTGCCTGCCGGTCAAGAAACTGACTTCATTCTAGTTTCATGTACGGGATCAGGAATAGAACCTAACAGAAGGGAGCAAGTTCTTAAAGCCAAGAGGGCTGGGGAAGATTCATTGCGAAGATCAGGAGTTGGATACACAATTATTCGACCTGGTCCCCTAAAGGAAGAACCTGGCGGACAACGTGCTCTCATATTTGATCAAGGAAACAGGATTTCTCAGGGGATCAGCTGTGCTGATGTAGCTGATATCTGTGTGAAAGCATTGCATGATTCAACTGCAAGGAACAAAAGCTTTGATGTATGTTATGAATATGTGGCTGATCAAGGGAAGGAACTCTATGAGCTGGTTGCACATTTGCCGGACAAAGCCAATAATTATCTGACGCCAGCACTATCAGCTCTAGAGAAGAACACCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CIA30 NAD_binding_10

Protein Analysis

616

Amino Acids

67.89

Weight (kDa)

9.32

Isoelectric Point (pI)

38.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NmrA PF05368 180 - 254 3.3e-10 NmrA-like family
Epimerase PF01370 183 - 283 5.1e-06 NAD dependent epimerase/dehydratase family
NAD_binding_10 PF13460 187 - 280 1.7e-12 NAD(P)H-binding
CIA30 PF08547 330 - 429 2.1e-09 Complex I intermediate-associated protein 30 (CIA30)
NAD_binding_10 PF13460 481 - 568 2.4e-12 NAD(P)H-binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 945
AatII GACGTC 1 cut(s) 366
Acc16I TGCGCA 1 cut(s) 858
Acc65I GGTACC 1 cut(s) 1261
AccB1I GGYRCC 1 cut(s) 1261
AccB7I CCANNNNNTGG 1 cut(s) 967
AccI GTMKAC 2 cut(s) 770, 813
AccIII TCCGGA 1 cut(s) 916
AciI CCGC 7 cut(s) 592, 641, 723, 1031, 1241, 1301, 1608
AclWI GGATC 7 cut(s) 81, 651, 1292, 1304, 1317, 1489, 1664
AcoI YGGCCR 1 cut(s) 577
AcsI RAATTY 2 cut(s) 1004, 1010
AcuI CTGAAG 1 cut(s) 1261
AcyI GRCGYC 3 cut(s) 363, 474, 1817
AfaI GTAC 6 cut(s) 256, 729, 1263, 1323, 1424, 1477
AfiI CCNNNNNNNGG 2 cut(s) 793, 967
AflIII ACRYGT 1 cut(s) 660
AgeI ACCGGT 1 cut(s) 1116
AgsI TTSAA 5 cut(s) 910, 1073, 1178, 1370, 1707
AhlI ACTAGT 1 cut(s) 257
AjiI CACGTC 1 cut(s) 1376
AjnI CCWGG 5 cut(s) 140, 960, 1378, 1582, 1603
Alw21I GWGCWC 1 cut(s) 1621
Alw26I GTCTC 2 cut(s) 465, 777
AlwI GGATC 7 cut(s) 81, 651, 1292, 1304, 1317, 1489, 1664
Aor13HI TCCGGA 1 cut(s) 916
AoxI GGCC 2 cut(s) 577, 1280
ApeKI GCWGC 4 cut(s) 97, 263, 337, 735
ApoI RAATTY 2 cut(s) 1004, 1010
AseI ATTAAT 1 cut(s) 1169
AsiGI ACCGGT 1 cut(s) 1116
Asp718I GGTACC 1 cut(s) 1261
AspLEI GCGC 3 cut(s) 97, 420, 859
AspS9I GGNCC 3 cut(s) 503, 1184, 1586
AsuC2I CCSGG 1 cut(s) 528
AsuHPI GGTGA 3 cut(s) 180, 643, 713
AsuII TTCGAA 1 cut(s) 1008
AvaII GGWCC 3 cut(s) 503, 1184, 1586
BamHI GGATCC 1 cut(s) 1309
BanI GGYRCC 1 cut(s) 1261
BanII GRGCYC 2 cut(s) 535, 1350
BarI GAAGNNNNNNTAC 2 cut(s) 202, 234
BbsI GAAGAC 2 cut(s) 366, 1360
Bbv12I GWGCWC 1 cut(s) 1621
BbvI GCAGC 4 cut(s) 84, 250, 349, 722
BccI CCATC 2 cut(s) 927, 980
BceAI ACGGC 1 cut(s) 710
BciT130I CCWGG 5 cut(s) 142, 962, 1380, 1584, 1605
BciVI GTATCC 1 cut(s) 1559
BclI TGATCA 2 cut(s) 1630, 1753
BcnI CCSGG 1 cut(s) 528
BcoDI GTCTC 2 cut(s) 465, 777
BcuI ACTAGT 1 cut(s) 257
BfaI CTAG 7 cut(s) 15, 168, 258, 453, 1056, 1466, 1835
BfmI CTRYAG 1 cut(s) 790
BfuI GTATCC 1 cut(s) 1559
BglI GCCNNNNNGGC 1 cut(s) 1529
BglII AGATCT 1 cut(s) 441
BisI GCNGC 5 cut(s) 98, 264, 338, 723, 736
BlsI GCNGC 5 cut(s) 99, 265, 339, 724, 737
Bme1390I CCNGG 6 cut(s) 142, 528, 962, 1380, 1584, 1605
Bme18I GGWCC 3 cut(s) 503, 1184, 1586
BmgBI CACGTC 1 cut(s) 1376
BmgT120I GGNCC 3 cut(s) 503, 1184, 1586
BmiI GGNNCC 7 cut(s) 146, 195, 505, 532, 1263, 1311, 1588
BmrFI CCNGG 6 cut(s) 142, 528, 962, 1380, 1584, 1605
BmrI ACTGGG 2 cut(s) 108, 365
BmsI GCATC 4 cut(s) 318, 472, 988, 1018
BmuI ACTGGG 2 cut(s) 108, 365
BpiI GAAGAC 2 cut(s) 366, 1360
BpmI CTGGAG 2 cut(s) 371, 1044
Bpu14I TTCGAA 1 cut(s) 1008
BpuEI CTTGAG 2 cut(s) 58, 430
BpuMI CCSGG 1 cut(s) 528
BsaHI GRCGYC 3 cut(s) 363, 474, 1817
BsaI GGTCTC 1 cut(s) 777
BsaJI CCNNGG 2 cut(s) 543, 668
BsaWI WCCGGW 3 cut(s) 190, 916, 1116
BsaXI ACNNNNNCTCC 4 cut(s) 1017, 1047, 1053, 1083
Bsc4I CCNNNNNNNGG 2 cut(s) 793, 967
Bse118I RCCGGY 2 cut(s) 1116, 1442
Bse1I ACTGG 6 cut(s) 61, 114, 371, 397, 1027, 1283
Bse3DI GCAATG 3 cut(s) 90, 1544, 1694
BseAI TCCGGA 1 cut(s) 916
BseBI CCWGG 5 cut(s) 142, 962, 1380, 1584, 1605
BseDI CCNNGG 2 cut(s) 543, 668
BseGI GGATG 5 cut(s) 700, 938, 970, 1003, 1271
BseLI CCNNNNNNNGG 2 cut(s) 793, 967
BseMI GCAATG 3 cut(s) 90, 1544, 1694
BseMII CTCAG 3 cut(s) 619, 1053, 1664
BseNI ACTGG 6 cut(s) 61, 114, 371, 397, 1027, 1283
BseRI GAGGAG 2 cut(s) 358, 822
BseX3I CGGCCG 1 cut(s) 577
BseXI GCAGC 4 cut(s) 84, 250, 349, 722
BseYI CCCAGC 3 cut(s) 379, 433, 1532
BsgI GTGCAG 1 cut(s) 747
Bsh1285I CGRYCG 1 cut(s) 580
BshFI GGCC 2 cut(s) 579, 1282
BshNI GGYRCC 1 cut(s) 1261
BshTI ACCGGT 1 cut(s) 1116
BsiEI CGRYCG 1 cut(s) 580
BsiHKAI GWGCWC 1 cut(s) 1621
BsiSI CCGG 9 cut(s) 191, 197, 528, 580, 707, 917, 1117, 1443, 1793
BslFI GGGAC 3 cut(s) 489, 964, 1572
BslI CCNNNNNNNGG 2 cut(s) 793, 967
BsmAI GTCTC 2 cut(s) 465, 777
BsmBI CGTCTC 1 cut(s) 465
BsmFI GGGAC 3 cut(s) 489, 964, 1572
BsnI GGCC 2 cut(s) 579, 1282
Bso31I GGTCTC 1 cut(s) 777
Bsp119I TTCGAA 1 cut(s) 1008
Bsp1286I GDGCHC 3 cut(s) 535, 1350, 1621
Bsp13I TCCGGA 1 cut(s) 916
Bsp1407I TGTACA 1 cut(s) 1321
BspACI CCGC 7 cut(s) 592, 641, 723, 1031, 1241, 1301, 1608
BspANI GGCC 2 cut(s) 579, 1282
BspCNI CTCAG 3 cut(s) 618, 1052, 1663
BspEI TCCGGA 1 cut(s) 916
BspLI GGNNCC 7 cut(s) 146, 195, 505, 532, 1263, 1311, 1588
BspPI GGATC 7 cut(s) 81, 651, 1292, 1304, 1317, 1489, 1664
BspQI GCTCTTC 1 cut(s) 492
BspT104I TTCGAA 1 cut(s) 1008
BspT107I GGYRCC 1 cut(s) 1261
BspTNI GGTCTC 1 cut(s) 777
BsrDI GCAATG 3 cut(s) 90, 1544, 1694
BsrFI RCCGGY 2 cut(s) 1116, 1442
BsrGI TGTACA 1 cut(s) 1321
BsrI ACTGG 6 cut(s) 61, 114, 371, 397, 1027, 1283
BssAI RCCGGY 2 cut(s) 1116, 1442
BssECI CCNNGG 2 cut(s) 543, 668
BssNI GRCGYC 3 cut(s) 363, 474, 1817
Bst2UI CCWGG 5 cut(s) 142, 962, 1380, 1584, 1605
Bst4CI ACNGT 5 cut(s) 247, 547, 619, 755, 768
Bst6I CTCTTC 2 cut(s) 281, 492
BstACI GRCGYC 3 cut(s) 363, 474, 1817
BstAUI TGTACA 1 cut(s) 1321
BstBI TTCGAA 1 cut(s) 1008
BstC8I GCNNGC 5 cut(s) 596, 890, 900, 1440, 1821
BstDEI CTNAG 6 cut(s) 570, 605, 716, 903, 1039, 1650
BstDSI CCRYGG 1 cut(s) 543
BstF5I GGATG 5 cut(s) 700, 938, 970, 1003, 1271
BstHHI GCGC 3 cut(s) 97, 420, 859
BstMAI GTCTC 2 cut(s) 465, 777
BstMCI CGRYCG 1 cut(s) 580
BstMWI GCNNNNNNNGC 9 cut(s) 17, 337, 346, 482, 1370, 1439, 1529, 1673, 1829
BstNI CCWGG 5 cut(s) 142, 962, 1380, 1584, 1605
BstNSI RCATGY 1 cut(s) 664
BstSCI CCNGG 6 cut(s) 140, 526, 960, 1378, 1582, 1603
BstSFI CTRYAG 1 cut(s) 790
BstV1I GCAGC 4 cut(s) 84, 250, 349, 722
BstV2I GAAGAC 2 cut(s) 366, 1360
BstX2I RGATCY 3 cut(s) 86, 441, 1309
BstXI CCANNNNNNTGG 1 cut(s) 550
BstYI RGATCY 3 cut(s) 86, 441, 1309
BstZI CGGCCG 1 cut(s) 577
BsuI GTATCC 1 cut(s) 1559
BsuRI GGCC 2 cut(s) 579, 1282
BtgI CCRYGG 1 cut(s) 543
BtrI CACGTC 1 cut(s) 1376
BtsCI GGATG 5 cut(s) 700, 938, 970, 1003, 1271
BtsIMutI CAGTG 2 cut(s) 68, 1290
Cac8I GCNNGC 5 cut(s) 596, 890, 900, 1440, 1821
CfoI GCGC 3 cut(s) 97, 420, 859
Cfr10I RCCGGY 2 cut(s) 1116, 1442
Cfr13I GGNCC 3 cut(s) 503, 1184, 1586
CseI GACGC 2 cut(s) 482, 1825
CsiI ACCWGGT 1 cut(s) 1582
Csp6I GTAC 6 cut(s) 255, 728, 1262, 1322, 1423, 1476
CspAI ACCGGT 1 cut(s) 1116
CviAII CATG 5 cut(s) 508, 661, 994, 1473, 1700
CviQI GTAC 6 cut(s) 255, 728, 1262, 1322, 1423, 1476
DdeI CTNAG 6 cut(s) 570, 605, 716, 903, 1039, 1650
EaeI YGGCCR 1 cut(s) 577
EagI CGGCCG 1 cut(s) 577
Eam1104I CTCTTC 2 cut(s) 281, 492
EarI CTCTTC 2 cut(s) 281, 492
EciI GGCGGA 3 cut(s) 656, 1290, 1623
EclXI CGGCCG 1 cut(s) 577
Eco24I GRGCYC 2 cut(s) 535, 1350
Eco31I GGTCTC 1 cut(s) 777
Eco32I GATATC 1 cut(s) 1681
Eco47I GGWCC 3 cut(s) 503, 1184, 1586
Eco52I CGGCCG 1 cut(s) 577
Eco57I CTGAAG 1 cut(s) 1261
EcoO109I RGGNCCY 1 cut(s) 503
EcoRI GAATTC 1 cut(s) 1010
EcoRII CCWGG 5 cut(s) 140, 960, 1378, 1582, 1603
EcoRV GATATC 1 cut(s) 1681
EcoT38I GRGCYC 2 cut(s) 535, 1350
Esp3I CGTCTC 1 cut(s) 465
FaeI CATG 5 cut(s) 511, 664, 997, 1476, 1703
FaqI GGGAC 3 cut(s) 489, 964, 1572
FatI CATG 5 cut(s) 507, 660, 993, 1472, 1699
FauI CCCGC 1 cut(s) 1234
FbaI TGATCA 2 cut(s) 1630, 1753
FblI GTMKAC 2 cut(s) 770, 813
Fnu4HI GCNGC 5 cut(s) 98, 264, 338, 723, 736
FokI GGATG 5 cut(s) 707, 945, 977, 1010, 1258
FriOI GRGCYC 2 cut(s) 535, 1350
Fsp4HI GCNGC 5 cut(s) 98, 264, 338, 723, 736
FspBI CTAG 7 cut(s) 15, 168, 258, 453, 1056, 1466, 1835
FspI TGCGCA 1 cut(s) 858
GlaI GCGC 3 cut(s) 96, 419, 858
GluI GCNGC 5 cut(s) 98, 264, 338, 723, 736
GsaI CCCAGC 3 cut(s) 383, 437, 1536
GsuI CTGGAG 2 cut(s) 371, 1044
HaeIII GGCC 2 cut(s) 579, 1282
HapII CCGG 9 cut(s) 191, 197, 528, 580, 707, 917, 1117, 1443, 1793
HgaI GACGC 2 cut(s) 482, 1825
HhaI GCGC 3 cut(s) 97, 420, 859
Hin1I GRCGYC 3 cut(s) 363, 474, 1817
Hin1II CATG 5 cut(s) 511, 664, 997, 1476, 1703
Hin6I GCGC 3 cut(s) 95, 418, 857
HinP1I GCGC 3 cut(s) 95, 418, 857
HincII GTYRAC 1 cut(s) 367
HindII GTYRAC 1 cut(s) 367
HindIII AAGCTT 6 cut(s) 596, 1085, 1402, 1409, 1431, 1723
HinfI GANTC 6 cut(s) 182, 810, 913, 920, 1541, 1703
HpaII CCGG 9 cut(s) 191, 197, 528, 580, 707, 917, 1117, 1443, 1793
HphI GGTGA 3 cut(s) 180, 643, 713
Hpy166II GTNNAC 5 cut(s) 367, 658, 771, 814, 1211
Hpy188I TCNGA 6 cut(s) 75, 271, 387, 560, 608, 1815
Hpy8I GTNNAC 5 cut(s) 367, 658, 771, 814, 1211
HpyAV CCTTC 9 cut(s) 200, 494, 631, 1118, 1149, 1197, 1285, 1497, 1756
HpyCH4III ACNGT 5 cut(s) 247, 547, 619, 755, 768
HpyCH4IV ACGT 5 cut(s) 363, 566, 1339, 1375, 1615
HpyCH4V TGCA 8 cut(s) 331, 738, 758, 764, 1223, 1699, 1712, 1784
HpyF10VI GCNNNNNNNGC 9 cut(s) 17, 337, 346, 482, 1370, 1439, 1529, 1673, 1829
HpyF3I CTNAG 6 cut(s) 570, 605, 716, 903, 1039, 1650
HpySE526I ACGT 5 cut(s) 363, 566, 1339, 1375, 1615
Hsp92I GRCGYC 3 cut(s) 363, 474, 1817
Hsp92II CATG 5 cut(s) 511, 664, 997, 1476, 1703
HspAI GCGC 3 cut(s) 95, 418, 857
Kpn2I TCCGGA 1 cut(s) 916
KpnI GGTACC 1 cut(s) 1265
Ksp22I TGATCA 2 cut(s) 1630, 1753
LguI GCTCTTC 1 cut(s) 492
LmnI GCTCC 5 cut(s) 193, 352, 530, 560, 1507
Lsp1109I GCAGC 4 cut(s) 84, 250, 349, 722
LweI GCATC 4 cut(s) 318, 472, 988, 1018
MabI ACCWGGT 1 cut(s) 1582
MaeI CTAG 7 cut(s) 15, 168, 258, 453, 1056, 1466, 1835
MaeII ACGT 5 cut(s) 363, 566, 1339, 1375, 1615
MflI RGATCY 3 cut(s) 86, 441, 1309
MhlI GDGCHC 3 cut(s) 535, 1350, 1621
MluCI AATT 6 cut(s) 860, 1004, 1010, 1170, 1572, 1807
MlyI GAGTC 1 cut(s) 819
MmeI TCCRAC 3 cut(s) 365, 538, 1543
MroI TCCGGA 1 cut(s) 916
MseI TTAA 6 cut(s) 621, 1169, 1230, 1331, 1407, 1518
MspA1I CMGCKG 1 cut(s) 1662
MspI CCGG 9 cut(s) 191, 197, 528, 580, 707, 917, 1117, 1443, 1793
MspR9I CCNGG 6 cut(s) 142, 528, 962, 1380, 1584, 1605
MvaI CCWGG 5 cut(s) 142, 962, 1380, 1584, 1605
MwoI GCNNNNNNNGC 9 cut(s) 17, 337, 346, 482, 1370, 1439, 1529, 1673, 1829
NciI CCSGG 1 cut(s) 528
NlaIII CATG 5 cut(s) 511, 664, 997, 1476, 1703
NlaIV GGNNCC 7 cut(s) 146, 195, 505, 532, 1263, 1311, 1588
NmeAIII GCCGAG 1 cut(s) 693
NsbI TGCGCA 1 cut(s) 858
NspI RCATGY 1 cut(s) 664
NspV TTCGAA 1 cut(s) 1008
PciI ACATGT 1 cut(s) 660
PciSI GCTCTTC 1 cut(s) 492
PfeI GAWTC 5 cut(s) 182, 913, 920, 1541, 1703
PflFI GACNNNGTC 1 cut(s) 1584
PflMI CCANNNNNTGG 1 cut(s) 967
PfoI TCCNGGA 3 cut(s) 526, 960, 1378
PinAI ACCGGT 1 cut(s) 1116
PkrI GCNGC 5 cut(s) 99, 265, 339, 724, 737
PleI GAGTC 1 cut(s) 818
PpsI GAGTC 1 cut(s) 818
PpuMI RGGWCCY 1 cut(s) 503
PscI ACATGT 1 cut(s) 660
PshBI ATTAAT 1 cut(s) 1169
PsiI TTATAA 1 cut(s) 945
Psp5II RGGWCCY 1 cut(s) 503
Psp6I CCWGG 5 cut(s) 140, 960, 1378, 1582, 1603
PspFI CCCAGC 3 cut(s) 379, 433, 1532
PspGI CCWGG 5 cut(s) 140, 960, 1378, 1582, 1603
PspN4I GGNNCC 7 cut(s) 146, 195, 505, 532, 1263, 1311, 1588
PspPI GGNCC 3 cut(s) 503, 1184, 1586
PspPPI RGGWCCY 1 cut(s) 503
PsuI RGATCY 3 cut(s) 86, 441, 1309
PsyI GACNNNGTC 1 cut(s) 1584
PvuII CAGCTG 1 cut(s) 1662
RsaI GTAC 6 cut(s) 256, 729, 1263, 1323, 1424, 1477
RsaNI GTAC 6 cut(s) 255, 728, 1262, 1322, 1423, 1476
SapI GCTCTTC 1 cut(s) 492
SaqAI TTAA 6 cut(s) 621, 1169, 1230, 1331, 1407, 1518
SatI GCNGC 5 cut(s) 98, 264, 338, 723, 736
Sau96I GGNCC 3 cut(s) 503, 1184, 1586
SchI GAGTC 1 cut(s) 819
ScrFI CCNGG 6 cut(s) 142, 528, 962, 1380, 1584, 1605
SduI GDGCHC 3 cut(s) 535, 1350, 1621
SexAI ACCWGGT 1 cut(s) 1582
SfaNI GCATC 4 cut(s) 318, 472, 988, 1018
SfcI CTRYAG 1 cut(s) 790
SfuI TTCGAA 1 cut(s) 1008
SinI GGWCC 3 cut(s) 503, 1184, 1586
SmlI CTYRAG 2 cut(s) 37, 445
SmoI CTYRAG 2 cut(s) 37, 445
SpeI ACTAGT 1 cut(s) 257
Sse9I AATT 6 cut(s) 860, 1004, 1010, 1170, 1572, 1807
SsiI CCGC 7 cut(s) 592, 641, 723, 1031, 1241, 1301, 1608
SspMI CTAG 7 cut(s) 15, 168, 258, 453, 1056, 1466, 1835
StyD4I CCNGG 6 cut(s) 140, 526, 960, 1378, 1582, 1603
TaaI ACNGT 5 cut(s) 247, 547, 619, 755, 768
TaiI ACGT 5 cut(s) 366, 569, 1342, 1378, 1618
TaqI TCGA 2 cut(s) 1008, 1579
TasI AATT 6 cut(s) 860, 1004, 1010, 1170, 1572, 1807
TatI WGTACW 2 cut(s) 1321, 1422
TauI GCSGC 1 cut(s) 725
TfiI GAWTC 5 cut(s) 182, 913, 920, 1541, 1703
Tru1I TTAA 6 cut(s) 621, 1169, 1230, 1331, 1407, 1518
Tru9I TTAA 6 cut(s) 621, 1169, 1230, 1331, 1407, 1518
TscAI CASTG 2 cut(s) 68, 1290
TseI GCWGC 4 cut(s) 97, 263, 337, 735
TspDTI ATGAA 9 cut(s) 219, 423, 480, 1137, 1260, 1450, 1461, 1533, 1755
TspRI CASTG 2 cut(s) 68, 1290
Tth111I GACNNNGTC 1 cut(s) 1584
Van91I CCANNNNNTGG 1 cut(s) 967
VpaK11BI GGWCC 3 cut(s) 503, 1184, 1586
VspI ATTAAT 1 cut(s) 1169
XapI RAATTY 2 cut(s) 1004, 1010
XbaI TCTAGA 1 cut(s) 1834
XceI RCATGY 1 cut(s) 664
XmiI GTMKAC 2 cut(s) 770, 813
XspI CTAG 7 cut(s) 15, 168, 258, 453, 1056, 1466, 1835
ZraI GACGTC 1 cut(s) 364
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.