Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0011810

Physical Location & Seq

Genomic Coordinates Reverse (-)

37569383 .. 37575412

Gene Structure 6030 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g50500.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2328 bp

ATGGATCTGGAGGGTGTGATCCGTACCCGTCCAAATAAGAAGGATTCATGGAAGACAGTGTTGACTTTGGCTTATCAGAGCTTGGGAGTTGTTTATGGAGATTTGAGCACTTCCCCTTTATATGTTTACAAGAGCACTTTTGCAGAGGACATTCACCATTCAGAGACTAATGAGGAGATTTATGGTGTTCTGTCGTTTGTGTTCTGGACACTCACACTCATTCCTCTAGTGAAATATGTGTTTATTGTGCTTAGAGCTGATGACAATGGTGAAGGTGGGACTTTTGCTTTGTATTCGTTACTGTCTCGGCATGCCCGAGTTAGCTCCTTGCCCAATTGCCAGCTTGCAGATGAGGAGCTATCAGAGTACCACAAAGATGGGATTGTTGCAAGTAACAGCTCTTTCGGGTCGAGTTTGAAATCGACATTGGAGAAGCATAAAGTGCTGCAGAAGGTGTTGCTTGTTCTGGCTTTGATCGGGACTTGCATGGTTATTGGTGATGGGGTGCTCACACCAGCAATTTCTGTGTTTTCGGCTGTATCAGGATTGGAGCTTTCTATGTCGAAAGAGCAGCACCGGTATGTTGAAGTCCCGGTTGCTTGTGTCATACTCATATTTCTATTTGCCATTCAACATTATGGGACCCACCGAGTAGGGTTCCTGTTTGCACCAGTTGTGATTGTTTGGCTTCTGTGCATCAGTTCCATTGGATTGTACAACATATTCCATTGGAATCCCCATGTCTATCAAGCACTCTCTCCATACTACATGTACAAATTTCTTAAAAAGACCCGGAGAGGAGGTTGGATGTCCTTGGGGGGTATACTGTTGTGTATCACAGGCTCAGAAGCAATGTTTGCTGATCTTGGGCACTTTTCACAGTTGTCAATCCAGATTGCTTTCACCTTTGTGGTTTATCCATCATTGATTCTTGCATATATGGGCCAAGCCGCGTACCTCTCCAAGCATCATGTCATAGAAACTGACTACCGCATTGGATTCTATGAATCAGTACCTGAGAAGATAAGATGGCCTGTTTTAGCTATAGCCATACTTGCTGCAGTGGTGGGAAGCCAAGCCATCATAACCGGAACTTTCTCCATAATCAAACAATGTTCTGCTTTGGGTTGCTTTCCAAGGGTCAAAATCATTCACACGTCATCTAAAATTCATGGTCAAATTTACATTCCAGAGATAAACTGGACTTTAATGTTTCTAACCTTGGCTGTTACCATCGGCTTTAGAGACACAAAATCCATGGGCAATGCGTCAGGTTTGGCTGTTATAACTGTCATGCTAGTCACTACCTGCCTCATGTCCCTAGTCATAGTCTTGTGCTGGCACAAAAATATCTTCCTCGCAATTTGCTTCATATTATTCTTTGGCTCCATTGAGGCACTCTACTTCTCAGCATCCCTTATTAAGTTTCGCGAAGGGGCTTGGGTTCCCATTGCTCTATCATTAATCTTCTTAATGGTCATGTATGTTTGGCACTATGGTACGTTCAAGAAATATGAGTTCGATGTCCAAAATAAAGTCTCCATCAACTGGCTTCTCAGTTTAGGTCCTACTCTAGGCATTGTTCGTGTCCGGGGCATTGGCCTTATACATACAGAGCTTGTTTCTGGGATCCCGGCTATTTTCTCCCACTTTGTTACTAACCTCCCAGCTTTCCACCAGGTAGTAGTGTTCCTCTGCATCAAATCTGTCCCAGTCCCACATGTCAAACCTGATGAAAGGTTCTTAGTGGGACGAGTTGGTCCAAGGGAGTACCGGCTGTATAGATGTATAGCACGCTATGGTTATCGTGATGTTCACAAGGATGATATGGAGTTTGAAAAAGATCTTATTTGTAGTATTGCAGAATTCATTCGGTCCGACAGACCAGAATGTAGTGTCAAACCGGAAACATTGGAAGATGATGAGAAGTTAACAGTTGTTGGGACTTCATCATCAAATTTAGATGGAGTGAGATTGTCTGTCGATGAGGCAGATTTCTCGGAAATAGCAAGCACCTCAGAGTTGATAGAAATAAGGCCTACTACAGAAAAGGTGAGGAAGAGGGTGAGGTTTGTGGTGCCAGAGACTCCACAAATTGATAGGGATACAGTGGATGAGTTGCAGGAACTGATGGAAGCAAGGGAGGCAGGAATGGCATTTATATTAGGCCACTCATATGTGAAGGCAAAGAGAGGCTCGAGTTTGATGAAGAAGCTAGTGATCAATTTTGGGTATGACTTCTTGAGGAGAAATTTTAGGGGACCGGCTTATGCTTTAAGCATTCCTCATGCATCTACTCTAGAGGTGGGGATGGTCTACCATGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0008150 GO:0008324 GO:0009987 GO:0015075 GO:0015077 GO:0015079 GO:0015318 GO:0015672 GO:0016020 GO:0022857 GO:0022890 GO:0030001 GO:0034220 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0071804 GO:0071805 GO:0071944 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

K_trans

Protein Analysis

776

Amino Acids

87.06

Weight (kDa)

8.07

Isoelectric Point (pI)

37.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
K_trans	PF02705	23 - 519	1.8e-171	K+ potassium transporter integral membrane domain
K_trans_C	PF22776	532 - 774	4.1e-27	K+ potassium transporter C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011810)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G14880
fragaria_vesca	FvH4_6g50500 FvH4_6g50500
malus_domestica	MD09G1035900.v1.1 MD17G1037500.v1.1
prunus_persica	Prupe.3G281900_v2.0.a1 Prupe.3G281900_v2.0.a1
pyrus_communis	pycom111g02870 pycom17g03360
rosa_chinensis	RchiOBHm_Chr2g0170921
rosa_laevigata	RLG00000021992
rosa_multiflora	Rmu_sc0009938.1_g000001
rosa_roxburghii	Rroxscaffold_2G00080980
rosa_rugosa	Rorug02G0552300
rosa_samantha	Rh2AG625000 Rh2BG635700 Rh2CG604400 Rh2DG647300
rosa_wichuraiana	Rw2G051770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1286
AasI	GACNNNNNNGTC	1 cut(s)	1758
Acc36I	ACCTGC	1 cut(s)	1316
AccB1I	GGYRCC	1 cut(s)	2077
AccB7I	CCANNNNNTGG	1 cut(s)	1548
AccI	GTMKAC	2 cut(s)	823, 2316
AccII	CGCG	2 cut(s)	953, 1431
AciI	CCGC	2 cut(s)	951, 991
AclWI	GGATC	4 cut(s)	12, 13, 1624, 1637
AcsI	RAATTY	6 cut(s)	776, 1167, 1179, 1865, 1957, 2251
AfaI	GTAC	8 cut(s)	25, 368, 716, 773, 956, 1014, 1501, 1772
AfiI	CCNNNNNNNGG	2 cut(s)	1548, 1574
AflIII	ACRYGT	3 cut(s)	768, 1155, 1720
AgeI	ACCGGT	1 cut(s)	576
AgsI	TTSAA	5 cut(s)	418, 587, 632, 1507, 1838
AjiI	CACGTC	1 cut(s)	1158
AjnI	CCWGG	1 cut(s)	1677
AjuI	GAANNNNNNNTTGG	2 cut(s)	410, 442
AleI	CACNNNNGTG	1 cut(s)	908
Alw21I	GWGCWC	3 cut(s)	110, 137, 510
Alw26I	GTCTC	5 cut(s)	158, 309, 1239, 1543, 2078
AlwI	GGATC	4 cut(s)	12, 13, 1624, 1637
AlwNI	CAGNNNCTG	2 cut(s)	1016, 2128
Ama87I	CYCGRG	2 cut(s)	315, 2197
AoxI	GGCC	5 cut(s)	943, 1031, 1600, 2036, 2167
ApeKI	GCWGC	3 cut(s)	445, 571, 1058
ApoI	RAATTY	6 cut(s)	776, 1167, 1179, 1865, 1957, 2251
ArsI	GACNNNNNNTTYG	2 cut(s)	271, 303
AseI	ATTAAT	1 cut(s)	1463
AsiGI	ACCGGT	1 cut(s)	576
Asp700I	GAANNNNTTC	1 cut(s)	1869
AspS9I	GGNCC	6 cut(s)	642, 943, 1565, 1760, 1875, 2261
AsuC2I	CCSGG	4 cut(s)	593, 793, 1592, 1634
AsuHPI	GGTGA	6 cut(s)	146, 281, 509, 895, 2065, 2077
AvaI	CYCGRG	2 cut(s)	315, 2197
AvaII	GGWCC	5 cut(s)	642, 1565, 1760, 1875, 2261
BaeGI	GKGCMC	1 cut(s)	873
BamHI	GGATCC	1 cut(s)	1629
BanI	GGYRCC	1 cut(s)	2077
BbsI	GAAGAC	1 cut(s)	59
Bbv12I	GWGCWC	3 cut(s)	110, 137, 510
BbvI	GCAGC	3 cut(s)	432, 583, 1045
BcgI	CGANNNNNNTGC	2 cut(s)	1980, 2014
BciT130I	CCWGG	1 cut(s)	1679
BciVI	GTATCC	1 cut(s)	2098
BclI	TGATCA	1 cut(s)	2220
BcnI	CCSGG	4 cut(s)	593, 793, 1592, 1634
BcoDI	GTCTC	5 cut(s)	158, 309, 1239, 1543, 2078
BfaI	CTAG	6 cut(s)	227, 1298, 1322, 1574, 2216, 2300
BfmI	CTRYAG	4 cut(s)	446, 1044, 1059, 2043
BfuAI	ACCTGC	1 cut(s)	1316
BfuI	GTATCC	1 cut(s)	2098
BglII	AGATCT	1 cut(s)	1843
BisI	GCNGC	4 cut(s)	446, 572, 951, 1059
BlsI	GCNGC	4 cut(s)	447, 573, 952, 1060
Bme1390I	CCNGG	5 cut(s)	593, 793, 1592, 1634, 1679
Bme18I	GGWCC	5 cut(s)	642, 1565, 1760, 1875, 2261
BmeT110I	CYCGRG	2 cut(s)	315, 2197
BmgBI	CACGTC	1 cut(s)	1158
BmgT120I	GGNCC	6 cut(s)	642, 943, 1565, 1760, 1875, 2261
BmiI	GGNNCC	8 cut(s)	643, 644, 659, 1387, 1446, 1631, 2079, 2262
BmrFI	CCNGG	5 cut(s)	593, 793, 1592, 1634, 1679
BmrI	ACTGGG	1 cut(s)	1706
BmsI	GCATC	5 cut(s)	705, 976, 1421, 1707, 2300
BmuI	ACTGGG	1 cut(s)	1706
BpiI	GAAGAC	1 cut(s)	59
BpmI	CTGGAG	1 cut(s)	29
BpuEI	CTTGAG	1 cut(s)	2263
BpuMI	CCSGG	4 cut(s)	593, 793, 1592, 1634
BsaJI	CCNNGG	6 cut(s)	813, 1136, 1221, 1257, 1591, 1763
BsaWI	WCCGGW	3 cut(s)	576, 1088, 1903
BsaXI	ACNNNNNCTCC	2 cut(s)	787, 817
Bsc4I	CCNNNNNNNGG	2 cut(s)	1548, 1574
Bse118I	RCCGGY	3 cut(s)	576, 1773, 2263
Bse1I	ACTGG	4 cut(s)	671, 1205, 1553, 1712
Bse3DI	GCAATG	3 cut(s)	858, 1270, 1449
BseBI	CCWGG	1 cut(s)	1679
BseDI	CCNNGG	6 cut(s)	813, 1136, 1221, 1257, 1591, 1763
BseGI	GGATG	5 cut(s)	813, 1412, 1828, 2119, 2316
BseLI	CCNNNNNNNGG	2 cut(s)	1548, 1574
BseMI	GCAATG	3 cut(s)	858, 1270, 1449
BseMII	CTCAG	5 cut(s)	858, 1008, 1422, 1570, 2031
BseNI	ACTGG	4 cut(s)	671, 1205, 1553, 1712
BseRI	GAGGAG	4 cut(s)	188, 368, 813, 2260
BseSI	GKGCMC	1 cut(s)	873
BseXI	GCAGC	3 cut(s)	432, 583, 1045
BseYI	CCCAGC	1 cut(s)	1666
Bsh1236I	CGCG	2 cut(s)	953, 1431
BshFI	GGCC	5 cut(s)	945, 1033, 1602, 2038, 2169
BshNI	GGYRCC	1 cut(s)	2077
BshTI	ACCGGT	1 cut(s)	576
BsiHKAI	GWGCWC	3 cut(s)	110, 137, 510
BsiHKCI	CYCGRG	2 cut(s)	315, 2197
BsiSI	CCGG	9 cut(s)	577, 593, 793, 1089, 1591, 1634, 1774, 1904, 2264
BslI	CCNNNNNNNGG	2 cut(s)	1548, 1574
BsmAI	GTCTC	5 cut(s)	158, 309, 1239, 1543, 2078
BsmI	GAATGC	1 cut(s)	2280
BsnI	GGCC	5 cut(s)	945, 1033, 1602, 2038, 2169
BsoBI	CYCGRG	2 cut(s)	315, 2197
Bsp1286I	GDGCHC	4 cut(s)	110, 137, 510, 873
Bsp1407I	TGTACA	2 cut(s)	714, 771
Bsp143I	GATC	7 cut(s)	4, 18, 474, 862, 1629, 1843, 2220
Bsp19I	CCATGG	1 cut(s)	1257
Bsp68I	TCGCGA	1 cut(s)	1431
BspACI	CCGC	2 cut(s)	951, 991
BspANI	GGCC	5 cut(s)	945, 1033, 1602, 2038, 2169
BspCNI	CTCAG	5 cut(s)	857, 1009, 1421, 1569, 2030
BspFNI	CGCG	2 cut(s)	953, 1431
BspLI	GGNNCC	8 cut(s)	643, 644, 659, 1387, 1446, 1631, 2079, 2262
BspMAI	CTGCAG	2 cut(s)	450, 1063
BspMI	ACCTGC	1 cut(s)	1316
BspPI	GGATC	4 cut(s)	12, 13, 1624, 1637
BspT107I	GGYRCC	1 cut(s)	2077
BsrDI	GCAATG	3 cut(s)	858, 1270, 1449
BsrFI	RCCGGY	3 cut(s)	576, 1773, 2263
BsrGI	TGTACA	2 cut(s)	714, 771
BsrI	ACTGG	4 cut(s)	671, 1205, 1553, 1712
BssAI	RCCGGY	3 cut(s)	576, 1773, 2263
BssECI	CCNNGG	6 cut(s)	813, 1136, 1221, 1257, 1591, 1763
BssMI	GATC	7 cut(s)	4, 18, 474, 862, 1629, 1843, 2220
BssNAI	GTATAC	1 cut(s)	824
BssT1I	CCWWGG	5 cut(s)	813, 1136, 1221, 1257, 1763
Bst1107I	GTATAC	1 cut(s)	824
Bst2UI	CCWGG	1 cut(s)	1679
Bst4CI	ACNGT	7 cut(s)	58, 303, 828, 882, 1291, 1936, 2110
Bst6I	CTCTTC	1 cut(s)	2054
BstAPI	GCANNNNNTGC	2 cut(s)	442, 857
BstAUI	TGTACA	2 cut(s)	714, 771
BstC8I	GCNNGC	6 cut(s)	312, 341, 345, 1340, 1795, 2011
BstDEI	CTNAG	7 cut(s)	251, 844, 1017, 1408, 1556, 1744, 2017
BstDSI	CCRYGG	1 cut(s)	1257
BstENI	CCTNNNNNAGG	1 cut(s)	1572
BstF5I	GGATG	5 cut(s)	813, 1412, 1828, 2119, 2316
BstFNI	CGCG	2 cut(s)	953, 1431
BstKTI	GATC	7 cut(s)	7, 21, 477, 865, 1632, 1846, 2223
BstMAI	GTCTC	5 cut(s)	158, 309, 1239, 1543, 2078
BstMBI	GATC	7 cut(s)	4, 18, 474, 862, 1629, 1843, 2220
BstMWI	GCNNNNNNNGC	5 cut(s)	442, 857, 1055, 2144, 2153
BstNI	CCWGG	1 cut(s)	1679
BstNSI	RCATGY	3 cut(s)	314, 772, 1724
BstSCI	CCNGG	5 cut(s)	591, 791, 1590, 1632, 1677
BstSFI	CTRYAG	4 cut(s)	446, 1044, 1059, 2043
BstSLI	GKGCMC	1 cut(s)	873
BstUI	CGCG	2 cut(s)	953, 1431
BstV1I	GCAGC	3 cut(s)	432, 583, 1045
BstV2I	GAAGAC	1 cut(s)	59
BstX2I	RGATCY	3 cut(s)	4, 1629, 1843
BstXI	CCANNNNNNTGG	1 cut(s)	377
BstYI	RGATCY	3 cut(s)	4, 1629, 1843
BstZ17I	GTATAC	1 cut(s)	824
BsuI	GTATCC	1 cut(s)	2098
BsuRI	GGCC	5 cut(s)	945, 1033, 1602, 2038, 2169
BtgI	CCRYGG	1 cut(s)	1257
BtrI	CACGTC	1 cut(s)	1158
BtsCI	GGATG	5 cut(s)	813, 1412, 1828, 2119, 2316
BtsI	GCAGTG	1 cut(s)	1068
BtsIMutI	CAGTG	3 cut(s)	63, 1068, 2115
BtuMI	TCGCGA	1 cut(s)	1431
BveI	ACCTGC	1 cut(s)	1316
Cac8I	GCNNGC	6 cut(s)	312, 341, 345, 1340, 1795, 2011
CaiI	CAGNNNCTG	2 cut(s)	1016, 2128
Cfr10I	RCCGGY	3 cut(s)	576, 1773, 2263
Cfr13I	GGNCC	6 cut(s)	642, 943, 1565, 1760, 1875, 2261
CpoI	CGGWCCG	1 cut(s)	1875
CseI	GACGC	1 cut(s)	1257
CsiI	ACCWGGT	1 cut(s)	1677
Csp6I	GTAC	8 cut(s)	24, 367, 715, 772, 955, 1013, 1500, 1771
CspAI	ACCGGT	1 cut(s)	576
CspI	CGGWCCG	1 cut(s)	1875
CviQI	GTAC	8 cut(s)	24, 367, 715, 772, 955, 1013, 1500, 1771
DdeI	CTNAG	7 cut(s)	251, 844, 1017, 1408, 1556, 1744, 2017
DpnI	GATC	7 cut(s)	6, 20, 476, 864, 1631, 1845, 2222
DpnII	GATC	7 cut(s)	4, 18, 474, 862, 1629, 1843, 2220
DrdI	GACNNNNNNGTC	1 cut(s)	1758
DseDI	GACNNNNNNGTC	1 cut(s)	1758
Eam1104I	CTCTTC	1 cut(s)	2054
EarI	CTCTTC	1 cut(s)	2054
Eco130I	CCWWGG	5 cut(s)	813, 1136, 1221, 1257, 1763
Eco147I	AGGCCT	1 cut(s)	2038
Eco47I	GGWCC	5 cut(s)	642, 1565, 1760, 1875, 2261
Eco88I	CYCGRG	2 cut(s)	315, 2197
EcoNI	CCTNNNNNAGG	1 cut(s)	1572
EcoO109I	RGGNCCY	2 cut(s)	642, 1565
EcoRI	GAATTC	1 cut(s)	1865
EcoRII	CCWGG	1 cut(s)	1677
EcoT14I	CCWWGG	5 cut(s)	813, 1136, 1221, 1257, 1763
EcoT22I	ATGCAT	1 cut(s)	2293
ErhI	CCWWGG	5 cut(s)	813, 1136, 1221, 1257, 1763
FauNDI	CATATG	1 cut(s)	2176
FbaI	TGATCA	1 cut(s)	2220
FblI	GTMKAC	2 cut(s)	823, 2316
Fnu4HI	GCNGC	4 cut(s)	446, 572, 951, 1059
FokI	GGATG	5 cut(s)	820, 1399, 1835, 2126, 2323
Fsp4HI	GCNGC	4 cut(s)	446, 572, 951, 1059
FspBI	CTAG	6 cut(s)	227, 1298, 1322, 1574, 2216, 2300
GluI	GCNGC	4 cut(s)	446, 572, 951, 1059
GsaI	CCCAGC	1 cut(s)	1670
GsuI	CTGGAG	1 cut(s)	29
HaeIII	GGCC	5 cut(s)	945, 1033, 1602, 2038, 2169
HapII	CCGG	9 cut(s)	577, 593, 793, 1089, 1591, 1634, 1774, 1904, 2264
HgaI	GACGC	1 cut(s)	1257
HincII	GTYRAC	2 cut(s)	63, 1932
HindII	GTYRAC	2 cut(s)	63, 1932
HinfI	GANTC	6 cut(s)	44, 733, 928, 999, 1007, 2086
HpaI	GTTAAC	1 cut(s)	1932
HpaII	CCGG	9 cut(s)	577, 593, 793, 1089, 1591, 1634, 1774, 1904, 2264
HphI	GGTGA	6 cut(s)	146, 281, 509, 895, 2065, 2077
Hpy166II	GTNNAC	6 cut(s)	63, 127, 824, 1816, 1932, 2317
Hpy188I	TCNGA	7 cut(s)	78, 163, 364, 847, 1879, 2002, 2020
Hpy8I	GTNNAC	6 cut(s)	63, 127, 824, 1816, 1932, 2317
HpyAV	CCTTC	5 cut(s)	34, 266, 445, 1427, 2176
HpyCH4III	ACNGT	7 cut(s)	58, 303, 828, 882, 1291, 1936, 2110
HpyCH4IV	ACGT	2 cut(s)	1157, 1502
HpyF10VI	GCNNNNNNNGC	5 cut(s)	442, 857, 1055, 2144, 2153
HpyF3I	CTNAG	7 cut(s)	251, 844, 1017, 1408, 1556, 1744, 2017
HpySE526I	ACGT	2 cut(s)	1157, 1502
KflI	GGGWCCC	1 cut(s)	642
Ksp22I	TGATCA	1 cut(s)	2220
KspAI	GTTAAC	1 cut(s)	1932
Kzo9I	GATC	7 cut(s)	4, 18, 474, 862, 1629, 1843, 2220
LmnI	GCTCC	4 cut(s)	329, 355, 550, 1391
Lsp1109I	GCAGC	3 cut(s)	432, 583, 1045
LweI	GCATC	5 cut(s)	705, 976, 1421, 1707, 2300
MabI	ACCWGGT	1 cut(s)	1677
MaeI	CTAG	6 cut(s)	227, 1298, 1322, 1574, 2216, 2300
MaeII	ACGT	2 cut(s)	1157, 1502
MaeIII	GTNAC	5 cut(s)	297, 392, 1228, 1300, 1654
MalI	GATC	7 cut(s)	6, 20, 476, 864, 1631, 1845, 2222
MboI	GATC	7 cut(s)	4, 18, 474, 862, 1629, 1843, 2220
MboII	GAAGA	7 cut(s)	64, 1033, 1345, 1459, 1928, 2071, 2221
MfeI	CAATTG	1 cut(s)	334
MflI	RGATCY	3 cut(s)	4, 1629, 1843
MhlI	GDGCHC	4 cut(s)	110, 137, 510, 873
MlyI	GAGTC	1 cut(s)	2080
MmeI	TCCRAC	2 cut(s)	785, 1902
Mph1103I	ATGCAT	1 cut(s)	2293
MroXI	GAANNNNTTC	1 cut(s)	1869
MseI	TTAA	8 cut(s)	783, 1208, 1422, 1463, 1472, 1931, 2276, 2326
MslI	CAYNNNNRTG	5 cut(s)	375, 579, 908, 1821, 2175
MspI	CCGG	9 cut(s)	577, 593, 793, 1089, 1591, 1634, 1774, 1904, 2264
MspR9I	CCNGG	5 cut(s)	593, 793, 1592, 1634, 1679
MunI	CAATTG	1 cut(s)	334
Mva1269I	GAATGC	1 cut(s)	2280
MvaI	CCWGG	1 cut(s)	1679
MvnI	CGCG	2 cut(s)	953, 1431
MwoI	GCNNNNNNNGC	5 cut(s)	442, 857, 1055, 2144, 2153
NciI	CCSGG	4 cut(s)	593, 793, 1592, 1634
NcoI	CCATGG	1 cut(s)	1257
NdeI	CATATG	1 cut(s)	2176
NdeII	GATC	7 cut(s)	4, 18, 474, 862, 1629, 1843, 2220
NlaIV	GGNNCC	8 cut(s)	643, 644, 659, 1387, 1446, 1631, 2079, 2262
NmeAIII	GCCGAG	1 cut(s)	286
NmuCI	GTSAC	1 cut(s)	1300
NruI	TCGCGA	1 cut(s)	1431
NsiI	ATGCAT	1 cut(s)	2293
NspI	RCATGY	3 cut(s)	314, 772, 1724
OliI	CACNNNNGTG	1 cut(s)	908
PaeI	GCATGC	1 cut(s)	314
PaeR7I	CTCGAG	1 cut(s)	2197
PceI	AGGCCT	1 cut(s)	2038
PciI	ACATGT	2 cut(s)	768, 1720
PcsI	WCGNNNNNNNCGW	1 cut(s)	313
PctI	GAATGC	1 cut(s)	2280
PdmI	GAANNNNTTC	1 cut(s)	1869
PfeI	GAWTC	5 cut(s)	44, 733, 928, 999, 1007
PflMI	CCANNNNNTGG	1 cut(s)	1548
PinAI	ACCGGT	1 cut(s)	576
PkrI	GCNGC	4 cut(s)	447, 573, 952, 1060
PleI	GAGTC	1 cut(s)	2080
PpsI	GAGTC	1 cut(s)	2080
PpuMI	RGGWCCY	2 cut(s)	642, 1565
PscI	ACATGT	2 cut(s)	768, 1720
PshBI	ATTAAT	1 cut(s)	1463
PsiI	TTATAA	1 cut(s)	1286
Psp5II	RGGWCCY	2 cut(s)	642, 1565
Psp6I	CCWGG	1 cut(s)	1677
PspFI	CCCAGC	1 cut(s)	1666
PspGI	CCWGG	1 cut(s)	1677
PspN4I	GGNNCC	8 cut(s)	643, 644, 659, 1387, 1446, 1631, 2079, 2262
PspPI	GGNCC	6 cut(s)	642, 943, 1565, 1760, 1875, 2261
PspPPI	RGGWCCY	2 cut(s)	642, 1565
PspXI	VCTCGAGB	1 cut(s)	2197
PstI	CTGCAG	2 cut(s)	450, 1063
PstNI	CAGNNNCTG	2 cut(s)	1016, 2128
PsuI	RGATCY	3 cut(s)	4, 1629, 1843
RruI	TCGCGA	1 cut(s)	1431
RsaI	GTAC	8 cut(s)	25, 368, 716, 773, 956, 1014, 1501, 1772
RsaNI	GTAC	8 cut(s)	24, 367, 715, 772, 955, 1013, 1500, 1771
RseI	CAYNNNNRTG	5 cut(s)	375, 579, 908, 1821, 2175
Rsr2I	CGGWCCG	1 cut(s)	1875
RsrII	CGGWCCG	1 cut(s)	1875
SaqAI	TTAA	8 cut(s)	783, 1208, 1422, 1463, 1472, 1931, 2276, 2326
SatI	GCNGC	4 cut(s)	446, 572, 951, 1059
Sau3AI	GATC	7 cut(s)	4, 18, 474, 862, 1629, 1843, 2220
Sau96I	GGNCC	6 cut(s)	642, 943, 1565, 1760, 1875, 2261
SchI	GAGTC	1 cut(s)	2080
ScrFI	CCNGG	5 cut(s)	593, 793, 1592, 1634, 1679
SduI	GDGCHC	4 cut(s)	110, 137, 510, 873
SexAI	ACCWGGT	1 cut(s)	1677
SfaNI	GCATC	5 cut(s)	705, 976, 1421, 1707, 2300
SfcI	CTRYAG	4 cut(s)	446, 1044, 1059, 2043
Sfr274I	CTCGAG	1 cut(s)	2197
SinI	GGWCC	5 cut(s)	642, 1565, 1760, 1875, 2261
SlaI	CTCGAG	1 cut(s)	2197
SmiMI	CAYNNNNRTG	5 cut(s)	375, 579, 908, 1821, 2175
SmlI	CTYRAG	2 cut(s)	2197, 2242
SmoI	CTYRAG	2 cut(s)	2197, 2242
SphI	GCATGC	1 cut(s)	314
SseBI	AGGCCT	1 cut(s)	2038
SsiI	CCGC	2 cut(s)	951, 991
SspMI	CTAG	6 cut(s)	227, 1298, 1322, 1574, 2216, 2300
StuI	AGGCCT	1 cut(s)	2038
StyD4I	CCNGG	5 cut(s)	591, 791, 1590, 1632, 1677
StyI	CCWWGG	5 cut(s)	813, 1136, 1221, 1257, 1763
TaaI	ACNGT	7 cut(s)	58, 303, 828, 882, 1291, 1936, 2110
TaiI	ACGT	2 cut(s)	1160, 1505
TaqI	TCGA	6 cut(s)	410, 422, 563, 1521, 1983, 2198
TaqII	GACCGA	1 cut(s)	1863
TatI	WGTACW	2 cut(s)	714, 771
TauI	GCSGC	1 cut(s)	953
TfiI	GAWTC	5 cut(s)	44, 733, 928, 999, 1007
Tru1I	TTAA	8 cut(s)	783, 1208, 1422, 1463, 1472, 1931, 2276, 2326
Tru9I	TTAA	8 cut(s)	783, 1208, 1422, 1463, 1472, 1931, 2276, 2326
TscAI	CASTG	3 cut(s)	63, 1068, 2115
TseFI	GTSAC	1 cut(s)	1300
TseI	GCWGC	3 cut(s)	445, 571, 1058
Tsp45I	GTSAC	1 cut(s)	1300
TspDTI	ATGAA	8 cut(s)	36, 1020, 1160, 1360, 1749, 1858, 1938, 2222
TspGWI	ACGGA	1 cut(s)	11
TspRI	CASTG	3 cut(s)	63, 1068, 2115
Van91I	CCANNNNNTGG	1 cut(s)	1548
VpaK11BI	GGWCC	5 cut(s)	642, 1565, 1760, 1875, 2261
VspI	ATTAAT	1 cut(s)	1463
XagI	CCTNNNNNAGG	1 cut(s)	1572
XapI	RAATTY	6 cut(s)	776, 1167, 1179, 1865, 1957, 2251
XbaI	TCTAGA	1 cut(s)	2299
XceI	RCATGY	3 cut(s)	314, 772, 1724
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1197
XhoI	CTCGAG	1 cut(s)	2197
XmiI	GTMKAC	2 cut(s)	823, 2316
XmnI	GAANNNNTTC	1 cut(s)	1869
XspI	CTAG	6 cut(s)	227, 1298, 1322, 1574, 2216, 2300
Zsp2I	ATGCAT	1 cut(s)	2293

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.