Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0011810

Physical Location & Seq

Genomic Coordinates Forward (+)

3962892 .. 3968512

Gene Structure 5621 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00080980.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2277 bp

ATGGATCCGGAGGGTGTGATCCGTACCCGTCCAAATAAGAAGGATTCATGGAAGACACTGCTGACTTTGGCTTATCAGAGCTTGGGAGTTGTCTATGGAGATTTGAGCACTTCACCTCTATATGTTTACAAGAGCACTTTTGCAGAGGACATTCACCATTCAGAGACTAATGAGGAGATTTATGGTGTTCTGTCCTTTGTGTTCTGGACACTCACACTGATTCCTCTAGTGAAATATGTGTTTATTGTGCTTAGAGCTGATGACAATGGCGAAGGTGGGACTTTTGCTCTGTATTCATTACTCTCTCGGCATGCCCGAGTTAGCACCTTGCCAAATTGCCAGCTTGCAGATGAGGAGCTATCAGAGTACCACAAAGATGGGATCGTTGCAAGCAGTGACAACTCTTTTGGGTCGAGATTGAAATCGACATTGGAGAAGCACAGAGTGCTGCAGAAGGTGTTGCTTGTTCTGGCTTTGATTGGGACTTGCATGGTTATTGGTGATGGCGTGCTTACACCAGCAATTTCTGATGTTGAAGTCCCTGTTGCTTGTGTCATACTCATAATTCTCTTTGCCATTCAACATTATGGGACCCACCGAGTAGGGTTCTTGTTTGCACCAGTTGTGATTTTATGGCTTCTGTGCATCAGTTCCATTGGTTTGTACAACATCTTCCATTGGAATCCCCATGTTTATCAAGCACTCTCTCCATACTACATGTACAAATTTCTAAAGAAGACTCAGAGAGGAGGTTGGATGTCCTTGGGTGGTATACTGTTGTGTATTACAGGCTCAGAAGCAATGTTTGCTGATCTTGGGCACTTTTCACAGTTGTCAATCCAGATTGCTTTCACCTTTGTGGTTTATCCATCATTGATTCTAGCATATATGGGCCAAGCTGCGTACCTCTCCAAGCATCATGTCATAGAAACTGACTATCGCATTGGATTCTATGAATCAGTACCTGAGAAATTAAGATGGCCTGTTTTAGCCATAGCCATACTTGCTGCAGTGGTGGGAAGCCAAGCCATCATAACTGGAACTTTCTCGATAATCAAACAATGTTCTGCTTTGGGTTGCTTTCCGAGGGTCAAAATCATTCACACATCATCTAAATTTCATGGACAAATTTACATTCCAGAGATAAACTGGACTTTAATGTTGCTAACCTTGGCGGTTACCATCGGCTTTAGAGATACAAAATCCATGGGCAATGCATCAGGTTTGGCTGTTATAACTGTCATGCTAGTGACTACCTGCCTTATGTCCCTAGTCATAGTCTTGTGCTGGCACAAAAATATCTTCCTCGCAATTTGCTTTATATTATTCTTTGGCTCCATTGAGGCACTCTACTTCTCAGCATCCCTTATAAAGTTTCGCGAAGGAGCTTGGGTTCCCGTTGCTCTTTCATTCATCTTCTTAATGGTTATGTACGTTTGGCACTATGGTACGTTCAAGAAATATGAATTTGATGTCCAAAATAAAGTCTCCATCAACTGGCTTCTCAGTTTAGGTCCTACTCTAGGCATTGTTCGTGTCCGGGGAATTGGCCTCATACATACTGAGCTTGTTTCTGGGATCCCAGCTATTTTCTCTCACTTTGTTACCAACCTCCCAGCTTTCCACCAGGTTGTAGTTTTCCTCTGCATCAAATCTGTCCCAGTCCCACATGTCAAACCTGATGAAAGGTTCTTAGTGGGACGAGTTGGTCCAAGGGAGTACCGGCTTTATAGATGTATAGCACGCTATGGTTATCGTGATGTTCACAAGGATGATATGGAGTTCGAAAAAGATCTTATTTGTAGTATTGCAGAATTCATTCGGTCTGAAAAACCAGAATGTAGTGTCAAACAGGAAAAATTGGAAGATGAAGAGAAATTGACAGTTGTTGGGACTTCATCATCAAATTTAGATGGCATAAGATTGTCTGTAGATGGCACAGATTTCAAGGAAATAGCAAGCACCTCAGAGTTGAAAGAGATAAGGCCTACTACAGAAAAGGTGAGAAAGAGGGTGAGGTTTGTGGTGCCAGAGACTCCACAAATTGATAGGGATGGAGTGGAGGAGTTGCAGGAACTGATGGAAGCAAGGGAGGCAGGAATGGCATTTATATTAGGCCACTCATACGTGAAGGCGAAGAGAGGATCGAGTTTGATGAAGAAGCTAGTTATCAATTTTGGGTATGATTTCTTGAGGAGAAATTTTAGGGGACCAACTTATGCTTTAAGCATTCCTCATGCATCTACTCTAGAGGTGGGGATGGTCTACCATGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0008150 GO:0008324 GO:0009987 GO:0015075 GO:0015077 GO:0015079 GO:0015318 GO:0015672 GO:0016020 GO:0022857 GO:0022890 GO:0030001 GO:0034220 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0071804 GO:0071805 GO:0071944 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

K_trans

Protein Analysis

758

Amino Acids

85.3

Weight (kDa)

8.35

Isoelectric Point (pI)

37.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
K_trans	PF02705	23 - 502	9.9e-158	K+ potassium transporter integral membrane domain
K_trans_C	PF22776	515 - 757	1.5e-27	K+ potassium transporter C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011810)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G14880
fragaria_vesca	FvH4_6g50500 FvH4_6g50500
malus_domestica	MD09G1035900.v1.1 MD17G1037500.v1.1
prunus_persica	Prupe.3G281900_v2.0.a1 Prupe.3G281900_v2.0.a1
pyrus_communis	pycom111g02870 pycom17g03360
rosa_chinensis	RchiOBHm_Chr2g0170921
rosa_laevigata	RLG00000021992
rosa_multiflora	Rmu_sc0009938.1_g000001
rosa_roxburghii	Rroxscaffold_2G00080980
rosa_rugosa	Rorug02G0552300
rosa_samantha	Rh2AG625000 Rh2BG635700 Rh2CG604400 Rh2DG647300
rosa_wichuraiana	Rw2G051770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1235, 1370
AasI	GACNNNNNNGTC	1 cut(s)	1707
Acc36I	ACCTGC	1 cut(s)	1265
AccB1I	GGYRCC	1 cut(s)	2026
AccB7I	CCANNNNNTGG	1 cut(s)	1497
AccI	GTMKAC	2 cut(s)	772, 2265
AccII	CGCG	1 cut(s)	1380
AccIII	TCCGGA	1 cut(s)	7
AciI	CCGC	1 cut(s)	1175
AclWI	GGATC	6 cut(s)	12, 13, 389, 1573, 1586, 2152
AcsI	RAATTY	7 cut(s)	725, 1115, 1128, 1466, 1814, 1906, 2200
AdeI	CACNNNGTG	1 cut(s)	445
AfaI	GTAC	9 cut(s)	25, 368, 665, 722, 905, 963, 1433, 1450, 1721
AfiI	CCNNNNNNNGG	2 cut(s)	1497, 1523
AflIII	ACRYGT	2 cut(s)	717, 1669
AgsI	TTSAA	6 cut(s)	421, 536, 581, 1456, 1948, 1975
AjnI	CCWGG	1 cut(s)	1626
AjuI	GAANNNNNNNTTGG	2 cut(s)	413, 445
AleI	CACNNNNGTG	1 cut(s)	857
AloI	GAACNNNNNNTCC	2 cut(s)	1377, 1409
Alw21I	GWGCWC	2 cut(s)	110, 137
Alw26I	GTCTC	3 cut(s)	158, 1492, 2027
AlwI	GGATC	6 cut(s)	12, 13, 389, 1573, 1586, 2152
AlwNI	CAGNNNCTG	2 cut(s)	965, 2077
Ama87I	CYCGRG	1 cut(s)	315
Aor13HI	TCCGGA	1 cut(s)	7
AoxI	GGCC	5 cut(s)	892, 980, 1549, 1985, 2116
ApeKI	GCWGC	3 cut(s)	448, 899, 1007
ApoI	RAATTY	7 cut(s)	725, 1115, 1128, 1466, 1814, 1906, 2200
ArsI	GACNNNNNNTTYG	2 cut(s)	389, 421
Asp700I	GAANNNNTTC	1 cut(s)	1818
AspS9I	GGNCC	5 cut(s)	591, 892, 1514, 1709, 2210
AsuC2I	CCSGG	1 cut(s)	1541
AsuHPI	GGTGA	6 cut(s)	105, 146, 512, 844, 2014, 2026
AsuII	TTCGAA	1 cut(s)	1785
AvaI	CYCGRG	1 cut(s)	315
AvaII	GGWCC	4 cut(s)	591, 1514, 1709, 2210
BaeGI	GKGCMC	1 cut(s)	822
BamHI	GGATCC	2 cut(s)	4, 1578
BanI	GGYRCC	1 cut(s)	2026
BarI	GAAGNNNNNNTAC	2 cut(s)	656, 688
BbsI	GAAGAC	2 cut(s)	59, 743
Bbv12I	GWGCWC	2 cut(s)	110, 137
BbvI	GCAGC	3 cut(s)	435, 886, 994
BciT130I	CCWGG	1 cut(s)	1628
BcnI	CCSGG	1 cut(s)	1541
BcoDI	GTCTC	3 cut(s)	158, 1492, 2027
BfaI	CTAG	7 cut(s)	227, 881, 1247, 1271, 1523, 2165, 2249
BfmI	CTRYAG	4 cut(s)	449, 1008, 1929, 1992
BfuAI	ACCTGC	1 cut(s)	1265
BglII	AGATCT	1 cut(s)	1792
BisI	GCNGC	3 cut(s)	449, 900, 1008
BlsI	GCNGC	3 cut(s)	450, 901, 1009
Bme1390I	CCNGG	2 cut(s)	1541, 1628
Bme18I	GGWCC	4 cut(s)	591, 1514, 1709, 2210
BmeT110I	CYCGRG	1 cut(s)	315
BmgT120I	GGNCC	5 cut(s)	591, 892, 1514, 1709, 2210
BmiI	GGNNCC	8 cut(s)	6, 592, 593, 1336, 1395, 1580, 2028, 2211
BmrFI	CCNGG	2 cut(s)	1541, 1628
BmrI	ACTGGG	1 cut(s)	1655
BmsI	GCATC	6 cut(s)	654, 925, 1226, 1370, 1656, 2249
BmuI	ACTGGG	1 cut(s)	1655
BpiI	GAAGAC	2 cut(s)	59, 743
Bpu14I	TTCGAA	1 cut(s)	1785
BpuEI	CTTGAG	1 cut(s)	2212
BpuMI	CCSGG	1 cut(s)	1541
BsaAI	YACGTR	1 cut(s)	2128
BsaBI	GATNNNNATC	1 cut(s)	421
BsaJI	CCNNGG	6 cut(s)	762, 1085, 1170, 1206, 1540, 1712
BsaWI	WCCGGW	1 cut(s)	7
BsaXI	ACNNNNNCTCC	2 cut(s)	1377, 1407
Bsc4I	CCNNNNNNNGG	2 cut(s)	1497, 1523
Bse118I	RCCGGY	1 cut(s)	1722
Bse1I	ACTGG	5 cut(s)	620, 1042, 1154, 1502, 1661
Bse3DI	GCAATG	2 cut(s)	807, 1219
Bse8I	GATNNNNATC	1 cut(s)	421
BseAI	TCCGGA	1 cut(s)	7
BseBI	CCWGG	1 cut(s)	1628
BseDI	CCNNGG	6 cut(s)	762, 1085, 1170, 1206, 1540, 1712
BseGI	GGATG	5 cut(s)	762, 1361, 1777, 2059, 2265
BseJI	GATNNNNATC	1 cut(s)	421
BseLI	CCNNNNNNNGG	2 cut(s)	1497, 1523
BseMI	GCAATG	2 cut(s)	807, 1219
BseMII	CTCAG	7 cut(s)	755, 807, 957, 1371, 1519, 1554, 1980
BseNI	ACTGG	5 cut(s)	620, 1042, 1154, 1502, 1661
BseRI	GAGGAG	5 cut(s)	188, 368, 762, 2078, 2209
BseSI	GKGCMC	1 cut(s)	822
BseXI	GCAGC	3 cut(s)	435, 886, 994
BseYI	CCCAGC	2 cut(s)	1582, 1615
Bsh1236I	CGCG	1 cut(s)	1380
BshFI	GGCC	5 cut(s)	894, 982, 1551, 1987, 2118
BshNI	GGYRCC	1 cut(s)	2026
BsiHKAI	GWGCWC	2 cut(s)	110, 137
BsiHKCI	CYCGRG	1 cut(s)	315
BsiSI	CCGG	3 cut(s)	8, 1540, 1723
BslI	CCNNNNNNNGG	2 cut(s)	1497, 1523
BsmAI	GTCTC	3 cut(s)	158, 1492, 2027
BsmI	GAATGC	1 cut(s)	2229
BsnI	GGCC	5 cut(s)	894, 982, 1551, 1987, 2118
BsoBI	CYCGRG	1 cut(s)	315
Bsp119I	TTCGAA	1 cut(s)	1785
Bsp1286I	GDGCHC	3 cut(s)	110, 137, 822
Bsp13I	TCCGGA	1 cut(s)	7
Bsp1407I	TGTACA	2 cut(s)	663, 720
Bsp143I	GATC	7 cut(s)	4, 18, 381, 811, 1578, 1792, 2144
Bsp19I	CCATGG	1 cut(s)	1206
Bsp68I	TCGCGA	1 cut(s)	1380
BspACI	CCGC	1 cut(s)	1175
BspANI	GGCC	5 cut(s)	894, 982, 1551, 1987, 2118
BspCNI	CTCAG	7 cut(s)	754, 806, 958, 1370, 1518, 1555, 1979
BspEI	TCCGGA	1 cut(s)	7
BspFNI	CGCG	1 cut(s)	1380
BspLI	GGNNCC	8 cut(s)	6, 592, 593, 1336, 1395, 1580, 2028, 2211
BspMAI	CTGCAG	2 cut(s)	453, 1012
BspMI	ACCTGC	1 cut(s)	1265
BspPI	GGATC	6 cut(s)	12, 13, 389, 1573, 1586, 2152
BspT104I	TTCGAA	1 cut(s)	1785
BspT107I	GGYRCC	1 cut(s)	2026
BsrDI	GCAATG	2 cut(s)	807, 1219
BsrFI	RCCGGY	1 cut(s)	1722
BsrGI	TGTACA	2 cut(s)	663, 720
BsrI	ACTGG	5 cut(s)	620, 1042, 1154, 1502, 1661
BssAI	RCCGGY	1 cut(s)	1722
BssECI	CCNNGG	6 cut(s)	762, 1085, 1170, 1206, 1540, 1712
BssMI	GATC	7 cut(s)	4, 18, 381, 811, 1578, 1792, 2144
BssNAI	GTATAC	1 cut(s)	773
BssT1I	CCWWGG	4 cut(s)	762, 1170, 1206, 1712
Bst1107I	GTATAC	1 cut(s)	773
Bst2UI	CCWGG	1 cut(s)	1628
Bst4CI	ACNGT	4 cut(s)	777, 831, 1240, 1885
Bst6I	CTCTTC	2 cut(s)	1866, 2132
BstAPI	GCANNNNNTGC	2 cut(s)	445, 806
BstAUI	TGTACA	2 cut(s)	663, 720
BstBAI	YACGTR	1 cut(s)	2128
BstBI	TTCGAA	1 cut(s)	1785
BstC8I	GCNNGC	8 cut(s)	312, 341, 345, 391, 509, 1289, 1744, 1960
BstDEI	CTNAG	9 cut(s)	251, 741, 793, 966, 1357, 1505, 1563, 1693, 1966
BstDSI	CCRYGG	1 cut(s)	1206
BstEII	GGTNACC	1 cut(s)	1177
BstENI	CCTNNNNNAGG	1 cut(s)	1521
BstF5I	GGATG	5 cut(s)	762, 1361, 1777, 2059, 2265
BstFNI	CGCG	1 cut(s)	1380
BstKTI	GATC	7 cut(s)	7, 21, 384, 814, 1581, 1795, 2147
BstMAI	GTCTC	3 cut(s)	158, 1492, 2027
BstMBI	GATC	7 cut(s)	4, 18, 381, 811, 1578, 1792, 2144
BstMWI	GCNNNNNNNGC	5 cut(s)	445, 806, 1004, 2093, 2102
BstNI	CCWGG	1 cut(s)	1628
BstNSI	RCATGY	3 cut(s)	314, 721, 1673
BstPI	GGTNACC	1 cut(s)	1177
BstSCI	CCNGG	2 cut(s)	1539, 1626
BstSFI	CTRYAG	4 cut(s)	449, 1008, 1929, 1992
BstSLI	GKGCMC	1 cut(s)	822
BstUI	CGCG	1 cut(s)	1380
BstV1I	GCAGC	3 cut(s)	435, 886, 994
BstV2I	GAAGAC	2 cut(s)	59, 743
BstX2I	RGATCY	3 cut(s)	4, 1578, 1792
BstXI	CCANNNNNNTGG	1 cut(s)	377
BstYI	RGATCY	3 cut(s)	4, 1578, 1792
BstZ17I	GTATAC	1 cut(s)	773
BsuRI	GGCC	5 cut(s)	894, 982, 1551, 1987, 2118
BtgI	CCRYGG	1 cut(s)	1206
BtsCI	GGATG	5 cut(s)	762, 1361, 1777, 2059, 2265
BtsI	GCAGTG	3 cut(s)	56, 400, 1017
BtsIMutI	CAGTG	4 cut(s)	56, 215, 400, 1017
BtuMI	TCGCGA	1 cut(s)	1380
BveI	ACCTGC	1 cut(s)	1265
Cac8I	GCNNGC	8 cut(s)	312, 341, 345, 391, 509, 1289, 1744, 1960
CaiI	CAGNNNCTG	2 cut(s)	965, 2077
Cfr10I	RCCGGY	1 cut(s)	1722
Cfr13I	GGNCC	5 cut(s)	591, 892, 1514, 1709, 2210
CsiI	ACCWGGT	1 cut(s)	1626
Csp6I	GTAC	9 cut(s)	24, 367, 664, 721, 904, 962, 1432, 1449, 1720
CviQI	GTAC	9 cut(s)	24, 367, 664, 721, 904, 962, 1432, 1449, 1720
DdeI	CTNAG	9 cut(s)	251, 741, 793, 966, 1357, 1505, 1563, 1693, 1966
DpnI	GATC	7 cut(s)	6, 20, 383, 813, 1580, 1794, 2146
DpnII	GATC	7 cut(s)	4, 18, 381, 811, 1578, 1792, 2144
DraIII	CACNNNGTG	1 cut(s)	445
DrdI	GACNNNNNNGTC	1 cut(s)	1707
DseDI	GACNNNNNNGTC	1 cut(s)	1707
Eam1104I	CTCTTC	2 cut(s)	1866, 2132
EarI	CTCTTC	2 cut(s)	1866, 2132
Eco130I	CCWWGG	4 cut(s)	762, 1170, 1206, 1712
Eco147I	AGGCCT	1 cut(s)	1987
Eco47I	GGWCC	4 cut(s)	591, 1514, 1709, 2210
Eco88I	CYCGRG	1 cut(s)	315
Eco91I	GGTNACC	1 cut(s)	1177
EcoNI	CCTNNNNNAGG	1 cut(s)	1521
EcoO109I	RGGNCCY	2 cut(s)	591, 1514
EcoO65I	GGTNACC	1 cut(s)	1177
EcoRI	GAATTC	1 cut(s)	1814
EcoRII	CCWGG	1 cut(s)	1626
EcoT14I	CCWWGG	4 cut(s)	762, 1170, 1206, 1712
EcoT22I	ATGCAT	2 cut(s)	1219, 2242
ErhI	CCWWGG	4 cut(s)	762, 1170, 1206, 1712
FblI	GTMKAC	2 cut(s)	772, 2265
Fnu4HI	GCNGC	3 cut(s)	449, 900, 1008
FokI	GGATG	5 cut(s)	769, 1348, 1784, 2066, 2272
Fsp4HI	GCNGC	3 cut(s)	449, 900, 1008
FspBI	CTAG	7 cut(s)	227, 881, 1247, 1271, 1523, 2165, 2249
GluI	GCNGC	3 cut(s)	449, 900, 1008
GsaI	CCCAGC	2 cut(s)	1586, 1619
HaeIII	GGCC	5 cut(s)	894, 982, 1551, 1987, 2118
HapII	CCGG	3 cut(s)	8, 1540, 1723
HinfI	GANTC	8 cut(s)	44, 220, 682, 739, 877, 948, 956, 2035
HpaII	CCGG	3 cut(s)	8, 1540, 1723
HphI	GGTGA	6 cut(s)	105, 146, 512, 844, 2014, 2026
Hpy166II	GTNNAC	4 cut(s)	127, 773, 1765, 2266
Hpy188I	TCNGA	9 cut(s)	78, 163, 364, 529, 744, 796, 1086, 1828, 1969
Hpy8I	GTNNAC	4 cut(s)	127, 773, 1765, 2266
HpyAV	CCTTC	5 cut(s)	34, 266, 448, 1376, 2125
HpyCH4III	ACNGT	4 cut(s)	777, 831, 1240, 1885
HpyCH4IV	ACGT	3 cut(s)	1434, 1451, 2127
HpyF10VI	GCNNNNNNNGC	5 cut(s)	445, 806, 1004, 2093, 2102
HpyF3I	CTNAG	9 cut(s)	251, 741, 793, 966, 1357, 1505, 1563, 1693, 1966
HpySE526I	ACGT	3 cut(s)	1434, 1451, 2127
KflI	GGGWCCC	1 cut(s)	591
Kpn2I	TCCGGA	1 cut(s)	7
Kzo9I	GATC	7 cut(s)	4, 18, 381, 811, 1578, 1792, 2144
LmnI	GCTCC	3 cut(s)	355, 1340, 1385
Lsp1109I	GCAGC	3 cut(s)	435, 886, 994
LweI	GCATC	6 cut(s)	654, 925, 1226, 1370, 1656, 2249
MabI	ACCWGGT	1 cut(s)	1626
MaeI	CTAG	7 cut(s)	227, 881, 1247, 1271, 1523, 2165, 2249
MaeII	ACGT	3 cut(s)	1434, 1451, 2127
MaeIII	GTNAC	4 cut(s)	395, 1177, 1249, 1603
MalI	GATC	7 cut(s)	6, 20, 383, 813, 1580, 1794, 2146
MboI	GATC	7 cut(s)	4, 18, 381, 811, 1578, 1792, 2144
MboII	GAAGA	9 cut(s)	64, 664, 748, 1294, 1408, 1877, 1883, 2149, 2170
MflI	RGATCY	3 cut(s)	4, 1578, 1792
MhlI	GDGCHC	3 cut(s)	110, 137, 822
MlyI	GAGTC	2 cut(s)	733, 2029
MmeI	TCCRAC	1 cut(s)	734
Mph1103I	ATGCAT	2 cut(s)	1219, 2242
MroI	TCCGGA	1 cut(s)	7
MroXI	GAANNNNTTC	1 cut(s)	1818
MseI	TTAA	5 cut(s)	974, 1157, 1421, 2225, 2275
MslI	CAYNNNNRTG	4 cut(s)	375, 857, 1247, 1770
MspI	CCGG	3 cut(s)	8, 1540, 1723
MspR9I	CCNGG	2 cut(s)	1541, 1628
Mva1269I	GAATGC	1 cut(s)	2229
MvaI	CCWGG	1 cut(s)	1628
MvnI	CGCG	1 cut(s)	1380
MwoI	GCNNNNNNNGC	5 cut(s)	445, 806, 1004, 2093, 2102
NciI	CCSGG	1 cut(s)	1541
NcoI	CCATGG	1 cut(s)	1206
NdeII	GATC	7 cut(s)	4, 18, 381, 811, 1578, 1792, 2144
NlaIV	GGNNCC	8 cut(s)	6, 592, 593, 1336, 1395, 1580, 2028, 2211
NmeAIII	GCCGAG	1 cut(s)	286
NmuCI	GTSAC	2 cut(s)	395, 1249
NruI	TCGCGA	1 cut(s)	1380
NsiI	ATGCAT	2 cut(s)	1219, 2242
NspI	RCATGY	3 cut(s)	314, 721, 1673
NspV	TTCGAA	1 cut(s)	1785
OliI	CACNNNNGTG	1 cut(s)	857
PaeI	GCATGC	1 cut(s)	314
PceI	AGGCCT	1 cut(s)	1987
PciI	ACATGT	2 cut(s)	717, 1669
PcsI	WCGNNNNNNNCGW	1 cut(s)	313
PctI	GAATGC	1 cut(s)	2229
PdmI	GAANNNNTTC	1 cut(s)	1818
PfeI	GAWTC	6 cut(s)	44, 220, 682, 877, 948, 956
PflMI	CCANNNNNTGG	1 cut(s)	1497
PkrI	GCNGC	3 cut(s)	450, 901, 1009
PleI	GAGTC	2 cut(s)	733, 2029
PpsI	GAGTC	2 cut(s)	733, 2029
Ppu21I	YACGTR	1 cut(s)	2128
PpuMI	RGGWCCY	2 cut(s)	591, 1514
PscI	ACATGT	2 cut(s)	717, 1669
PsiI	TTATAA	2 cut(s)	1235, 1370
Psp5II	RGGWCCY	2 cut(s)	591, 1514
Psp6I	CCWGG	1 cut(s)	1626
PspEI	GGTNACC	1 cut(s)	1177
PspFI	CCCAGC	2 cut(s)	1582, 1615
PspGI	CCWGG	1 cut(s)	1626
PspN4I	GGNNCC	8 cut(s)	6, 592, 593, 1336, 1395, 1580, 2028, 2211
PspPI	GGNCC	5 cut(s)	591, 892, 1514, 1709, 2210
PspPPI	RGGWCCY	2 cut(s)	591, 1514
PstI	CTGCAG	2 cut(s)	453, 1012
PstNI	CAGNNNCTG	2 cut(s)	965, 2077
PsuI	RGATCY	3 cut(s)	4, 1578, 1792
RruI	TCGCGA	1 cut(s)	1380
RsaI	GTAC	9 cut(s)	25, 368, 665, 722, 905, 963, 1433, 1450, 1721
RsaNI	GTAC	9 cut(s)	24, 367, 664, 721, 904, 962, 1432, 1449, 1720
RseI	CAYNNNNRTG	4 cut(s)	375, 857, 1247, 1770
SaqAI	TTAA	5 cut(s)	974, 1157, 1421, 2225, 2275
SatI	GCNGC	3 cut(s)	449, 900, 1008
Sau3AI	GATC	7 cut(s)	4, 18, 381, 811, 1578, 1792, 2144
Sau96I	GGNCC	5 cut(s)	591, 892, 1514, 1709, 2210
SchI	GAGTC	2 cut(s)	733, 2029
ScrFI	CCNGG	2 cut(s)	1541, 1628
SduI	GDGCHC	3 cut(s)	110, 137, 822
SexAI	ACCWGGT	1 cut(s)	1626
SfaNI	GCATC	6 cut(s)	654, 925, 1226, 1370, 1656, 2249
SfcI	CTRYAG	4 cut(s)	449, 1008, 1929, 1992
SfuI	TTCGAA	1 cut(s)	1785
SinI	GGWCC	4 cut(s)	591, 1514, 1709, 2210
SmiMI	CAYNNNNRTG	4 cut(s)	375, 857, 1247, 1770
SmlI	CTYRAG	1 cut(s)	2191
SmoI	CTYRAG	1 cut(s)	2191
SphI	GCATGC	1 cut(s)	314
SseBI	AGGCCT	1 cut(s)	1987
SsiI	CCGC	1 cut(s)	1175
SspMI	CTAG	7 cut(s)	227, 881, 1247, 1271, 1523, 2165, 2249
StuI	AGGCCT	1 cut(s)	1987
StyD4I	CCNGG	2 cut(s)	1539, 1626
StyI	CCWWGG	4 cut(s)	762, 1170, 1206, 1712
TaaI	ACNGT	4 cut(s)	777, 831, 1240, 1885
TaiI	ACGT	3 cut(s)	1437, 1454, 2130
TaqI	TCGA	5 cut(s)	413, 425, 1049, 1785, 2147
TaqII	GACCGA	1 cut(s)	1812
TatI	WGTACW	2 cut(s)	663, 720
TfiI	GAWTC	6 cut(s)	44, 220, 682, 877, 948, 956
Tru1I	TTAA	5 cut(s)	974, 1157, 1421, 2225, 2275
Tru9I	TTAA	5 cut(s)	974, 1157, 1421, 2225, 2275
TscAI	CASTG	4 cut(s)	63, 222, 400, 1017
TseFI	GTSAC	2 cut(s)	395, 1249
TseI	GCWGC	3 cut(s)	448, 899, 1007
Tsp45I	GTSAC	2 cut(s)	395, 1249
TspGWI	ACGGA	1 cut(s)	11
TspRI	CASTG	4 cut(s)	63, 222, 400, 1017
Van91I	CCANNNNNTGG	1 cut(s)	1497
VpaK11BI	GGWCC	4 cut(s)	591, 1514, 1709, 2210
XagI	CCTNNNNNAGG	1 cut(s)	1521
XapI	RAATTY	7 cut(s)	725, 1115, 1128, 1466, 1814, 1906, 2200
XbaI	TCTAGA	1 cut(s)	2248
XceI	RCATGY	3 cut(s)	314, 721, 1673
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1146
XmiI	GTMKAC	2 cut(s)	772, 2265
XmnI	GAANNNNTTC	1 cut(s)	1818
XspI	CTAG	7 cut(s)	227, 881, 1247, 1271, 1523, 2165, 2249
Zsp2I	ATGCAT	2 cut(s)	1219, 2242

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.