Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0011810

Physical Location & Seq

Genomic Coordinates Reverse (-)

84814113 .. 84818641

Gene Structure 4529 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG625000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2331 bp

ATGGATCCGGAGGGTGTGAGCCGCACCCGTCCAAATAAGAAGGATTCATGGAAGACACTGCTGACTTTGGCTTATCAGAGCTTGGGAGTTGTCTATGGAGATTTGAGCACTTCACCTCTATATGTTTACAAGAGCACTTTTGCAGAGGACATTCACCATTCAGAGACTAATGAGGAGATTTATGGTGTTCTGTCCTTTGTGTTCTGGACACTCACACTGATTCCTCTAGTGAAATATGTGTTTATTGTGCTTAGAGCTGATGACAATGGCGAAGGTGGCACTTTTGCTCTGTATTCATTACTCTCTCGGCATGCCCGAGTTAGCTCCTTGCCAAATTGCCAGCTTGCAGATGAGGAGCTATCAGAGTACCACAAAGATGGGATCGTTGCAAGCAGTGACAACTCTTTTGGGTCGAGATTGAAATCGACATTGGAGAAGCACAGAGTGCTGCAGAAGGTGTTGCTTGTTCTGGCTTTGATTGGGACTTGCATGGTTATTGGTGATGGCGTGCTTACACCAGCAATTTCTGTGTTTTCGGCTGTATCAGGATTGGAGCTATCTATGTCGAAAGAGCAGCACCGGTATGTTGAAGTCCCCGTTGCTTGTGTCATACTCATAATTCTCTTTGCCATTCAACATTATGGGACCCACCGAGTAGGGTTCTTGTTTGCACCAGTTGTGATTTTATGGCTTCTGTGCATCAGTTCCATTGGTTTGTACAACATCTTCCATTGGAATCCCCATGTTTATCAAGCACTCTCTCCATACTACATGTACAAATTTCTAAAGAAGACTCAGAGAGGAGGTTGGATGTCCTTGGGTGGTATACTGTTGTGTATTACAGGCTCAGAAGCAATGTTTGCTGATCTTGGGCACTTTTCACAGTTGTCGATCCAGATTGCTTTCACCTTTGTAGTTTATCCATCATTGATTCTAGCATATATGGGCCAAGCTGCGTACCTCTCCAAGCATCATGTCATAGAAACTGACTATCGCATTGGATTCTATGAATCAGTACCTGAGAAATTAAGATGGCCTGTTTTAGCTATAGCCATACTTGCTGCAGTGGTGGGAAGCCAAGCCATCATAACTGGAACTTTCTCGATAATCAAACAATGTTCTGCTTTGGGTTGCTTTCCGAGGGTCAAAATCATTCACACATCATCTAAAATTCATGGACAAATTTACATTCCAGAGATAAACTGGACTTTAATGTTGCTAACCTTGGCTGTTACCATCGGCTTTAGAGACACAAAATCCATGGGCAATGCATCAGGTTTGGCTGTTATAACTGTCATGCTAGTGACTACCTGCCTTATGTCCCTAGTCATAGTCTTGTGCTGGCACAAAAATATCTTCCTTGCAATTTGCTTTATATTATTCTTTGGCTCCATTGAGGCACTCTACTTCTCAGCATCCCTTATAAAGTTTCGCGAAGGGGCTTGGGTTCCCGTTGCTCTTTCATTCATCTTCTTAATGGTTATGTATGTTTGGCACTATGGTACATTCAAGAAATATGAATTTGATGTCCAAAATAAAGTCTCCATCAACTGGCTTCTCAGTTTAGGTCCTACTCTAGGCATTGTTCGTGTCCGGGGAATTGGCCTCATACATACTGAGCTTGTTTCGGGGATCCCAGCTATTTTCTCTCACTTTGTTACCAACCTCCCAGCTTTCCACCAGGTTGTAGTTTTCCTCTGCATCAAATCTGTCCCAGTCCCACATGTCAAACCTGATGAAAGGTTCTTAGTGGGACGAGTTGGTCCAAGGGAGTACCGGCTCTATAGATGTATAGCACGCTATGGTTATCGTGATGTTCACAAGGATGATATGGAGTTCGAAAAAGATCTTATTTGTAGTATTGCAGAATTCATTCGGTCTGAAAAACCAGAATGTAGTGTCAAACTGGAAAAATTGGAAGATGAAGAGAAATTGACAGTTGTTGGGACTTCATCATCAAATTTAGATGGCATAAGATTGTCTGTAGATGGCACAGATTTCAAGGAAATAGCAAGCACCTCAGAGTTGAAAGAGATAAGGCCTGCTACAGAAAAGGTGAGAAAGAGGGTGAGGTTTGTGGTGCCAGAGACTCCACAAATTGATAGGGATGCAGTGGAGGAGTTGGAGGAGCTGATGGAAGCAAGGGAGGCAGGAATGGCATTTATATTAGGCCACTCATACGTGAAGGCGAAGAGAGGATCGAGTTTGATGAAGAAGCTAGTGATCAATTTTGGGTATGATTTCTTGAGGAGAAATTTTAGGGGACCAACTTATGCTTTAAGCATTCCTCATGCATCTACTCTAGAGGTGGGGATGGTCTACCATGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0008150 GO:0008324 GO:0009987 GO:0015075 GO:0015077 GO:0015079 GO:0015318 GO:0015672 GO:0016020 GO:0022857 GO:0022890 GO:0030001 GO:0034220 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0071804 GO:0071805 GO:0071944 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

K_trans

Protein Analysis

776

Amino Acids

87.23

Weight (kDa)

8.35

Isoelectric Point (pI)

37.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
K_trans	PF02705	23 - 520	2.8e-171	K+ potassium transporter integral membrane domain
K_trans_C	PF22776	533 - 775	1.3e-27	K+ potassium transporter C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011810)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G14880
fragaria_vesca	FvH4_6g50500 FvH4_6g50500
malus_domestica	MD09G1035900.v1.1 MD17G1037500.v1.1
prunus_persica	Prupe.3G281900_v2.0.a1 Prupe.3G281900_v2.0.a1
pyrus_communis	pycom111g02870 pycom17g03360
rosa_chinensis	RchiOBHm_Chr2g0170921
rosa_laevigata	RLG00000021992
rosa_multiflora	Rmu_sc0009938.1_g000001
rosa_roxburghii	Rroxscaffold_2G00080980
rosa_rugosa	Rorug02G0552300
rosa_samantha	Rh2AG625000 Rh2BG635700 Rh2CG604400 Rh2DG647300
rosa_wichuraiana	Rw2G051770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1289, 1424
AasI	GACNNNNNNGTC	1 cut(s)	1761
Acc36I	ACCTGC	1 cut(s)	1319
AccB1I	GGYRCC	1 cut(s)	2080
AccB7I	CCANNNNNTGG	1 cut(s)	1551
AccI	GTMKAC	2 cut(s)	826, 2319
AccII	CGCG	1 cut(s)	1434
AccIII	TCCGGA	1 cut(s)	7
AciI	CCGC	1 cut(s)	22
AclWI	GGATC	6 cut(s)	12, 389, 886, 1627, 1640, 2206
AcsI	RAATTY	7 cut(s)	779, 1170, 1182, 1520, 1868, 1960, 2254
AdeI	CACNNNGTG	1 cut(s)	445
AfaI	GTAC	7 cut(s)	368, 719, 776, 959, 1017, 1504, 1775
AfiI	CCNNNNNNNGG	2 cut(s)	1551, 1577
AflIII	ACRYGT	2 cut(s)	771, 1723
AgeI	ACCGGT	1 cut(s)	579
AgsI	TTSAA	6 cut(s)	421, 590, 635, 1510, 2002, 2029
AjnI	CCWGG	1 cut(s)	1680
AjuI	GAANNNNNNNTTGG	2 cut(s)	413, 445
Alw21I	GWGCWC	2 cut(s)	110, 137
Alw26I	GTCTC	4 cut(s)	158, 1242, 1546, 2081
AlwI	GGATC	6 cut(s)	12, 389, 886, 1627, 1640, 2206
AlwNI	CAGNNNCTG	1 cut(s)	1019
Ama87I	CYCGRG	1 cut(s)	315
Aor13HI	TCCGGA	1 cut(s)	7
AoxI	GGCC	5 cut(s)	946, 1034, 1603, 2039, 2170
ApeKI	GCWGC	4 cut(s)	448, 574, 953, 1061
ApoI	RAATTY	7 cut(s)	779, 1170, 1182, 1520, 1868, 1960, 2254
ArsI	GACNNNNNNTTYG	2 cut(s)	389, 421
AsiGI	ACCGGT	1 cut(s)	579
Asp700I	GAANNNNTTC	1 cut(s)	1872
AspS9I	GGNCC	5 cut(s)	645, 946, 1568, 1763, 2264
AsuC2I	CCSGG	1 cut(s)	1595
AsuHPI	GGTGA	6 cut(s)	105, 146, 512, 898, 2068, 2080
AsuII	TTCGAA	1 cut(s)	1839
AvaI	CYCGRG	1 cut(s)	315
AvaII	GGWCC	4 cut(s)	645, 1568, 1763, 2264
BaeGI	GKGCMC	1 cut(s)	876
BamHI	GGATCC	2 cut(s)	4, 1632
BanI	GGYRCC	1 cut(s)	2080
BarI	GAAGNNNNNNTAC	2 cut(s)	710, 742
BbsI	GAAGAC	2 cut(s)	59, 797
Bbv12I	GWGCWC	2 cut(s)	110, 137
BbvI	GCAGC	4 cut(s)	435, 586, 940, 1048
BciT130I	CCWGG	1 cut(s)	1682
BclI	TGATCA	1 cut(s)	2223
BcnI	CCSGG	1 cut(s)	1595
BcoDI	GTCTC	4 cut(s)	158, 1242, 1546, 2081
BfaI	CTAG	7 cut(s)	227, 935, 1301, 1325, 1577, 2219, 2303
BfmI	CTRYAG	6 cut(s)	449, 1047, 1062, 1783, 1983, 2046
BfuAI	ACCTGC	1 cut(s)	1319
BglII	AGATCT	1 cut(s)	1846
BisI	GCNGC	5 cut(s)	22, 449, 575, 954, 1062
BlsI	GCNGC	5 cut(s)	23, 450, 576, 955, 1063
Bme1390I	CCNGG	2 cut(s)	1595, 1682
Bme18I	GGWCC	4 cut(s)	645, 1568, 1763, 2264
BmeT110I	CYCGRG	1 cut(s)	315
BmgT120I	GGNCC	5 cut(s)	645, 946, 1568, 1763, 2264
BmiI	GGNNCC	8 cut(s)	6, 646, 647, 1390, 1449, 1634, 2082, 2265
BmrFI	CCNGG	2 cut(s)	1595, 1682
BmrI	ACTGGG	1 cut(s)	1709
BmsI	GCATC	7 cut(s)	708, 979, 1280, 1424, 1710, 2098, 2303
BmuI	ACTGGG	1 cut(s)	1709
BpiI	GAAGAC	2 cut(s)	59, 797
Bpu14I	TTCGAA	1 cut(s)	1839
BpuEI	CTTGAG	1 cut(s)	2266
BpuMI	CCSGG	1 cut(s)	1595
BsaAI	YACGTR	1 cut(s)	2182
BsaBI	GATNNNNATC	1 cut(s)	421
BsaJI	CCNNGG	6 cut(s)	816, 1139, 1224, 1260, 1594, 1766
BsaWI	WCCGGW	2 cut(s)	7, 579
Bsc4I	CCNNNNNNNGG	2 cut(s)	1551, 1577
Bse118I	RCCGGY	2 cut(s)	579, 1776
Bse1I	ACTGG	6 cut(s)	674, 1096, 1208, 1556, 1715, 1911
Bse3DI	GCAATG	2 cut(s)	861, 1273
Bse8I	GATNNNNATC	1 cut(s)	421
BseAI	TCCGGA	1 cut(s)	7
BseBI	CCWGG	1 cut(s)	1682
BseDI	CCNNGG	6 cut(s)	816, 1139, 1224, 1260, 1594, 1766
BseGI	GGATG	5 cut(s)	816, 1415, 1831, 2113, 2319
BseJI	GATNNNNATC	1 cut(s)	421
BseLI	CCNNNNNNNGG	2 cut(s)	1551, 1577
BseMI	GCAATG	2 cut(s)	861, 1273
BseMII	CTCAG	7 cut(s)	809, 861, 1011, 1425, 1573, 1608, 2034
BseNI	ACTGG	6 cut(s)	674, 1096, 1208, 1556, 1715, 1911
BseRI	GAGGAG	6 cut(s)	188, 368, 816, 2132, 2141, 2263
BseSI	GKGCMC	1 cut(s)	876
BseXI	GCAGC	4 cut(s)	435, 586, 940, 1048
BseYI	CCCAGC	2 cut(s)	1636, 1669
Bsh1236I	CGCG	1 cut(s)	1434
BshFI	GGCC	5 cut(s)	948, 1036, 1605, 2041, 2172
BshNI	GGYRCC	1 cut(s)	2080
BshTI	ACCGGT	1 cut(s)	579
BsiHKAI	GWGCWC	2 cut(s)	110, 137
BsiHKCI	CYCGRG	1 cut(s)	315
BsiSI	CCGG	4 cut(s)	8, 580, 1594, 1777
BslFI	GGGAC	9 cut(s)	496, 578, 658, 1306, 1697, 1703, 1767, 1960, 2277
BslI	CCNNNNNNNGG	2 cut(s)	1551, 1577
BsmAI	GTCTC	4 cut(s)	158, 1242, 1546, 2081
BsmFI	GGGAC	9 cut(s)	496, 578, 658, 1306, 1697, 1703, 1767, 1960, 2277
BsmI	GAATGC	1 cut(s)	2283
BsnI	GGCC	5 cut(s)	948, 1036, 1605, 2041, 2172
BsoBI	CYCGRG	1 cut(s)	315
Bsp119I	TTCGAA	1 cut(s)	1839
Bsp1286I	GDGCHC	3 cut(s)	110, 137, 876
Bsp13I	TCCGGA	1 cut(s)	7
Bsp1407I	TGTACA	2 cut(s)	717, 774
Bsp143I	GATC	8 cut(s)	4, 381, 865, 891, 1632, 1846, 2198, 2223
Bsp19I	CCATGG	1 cut(s)	1260
Bsp68I	TCGCGA	1 cut(s)	1434
BspACI	CCGC	1 cut(s)	22
BspANI	GGCC	5 cut(s)	948, 1036, 1605, 2041, 2172
BspCNI	CTCAG	7 cut(s)	808, 860, 1012, 1424, 1572, 1609, 2033
BspEI	TCCGGA	1 cut(s)	7
BspFNI	CGCG	1 cut(s)	1434
BspLI	GGNNCC	8 cut(s)	6, 646, 647, 1390, 1449, 1634, 2082, 2265
BspMAI	CTGCAG	2 cut(s)	453, 1066
BspMI	ACCTGC	1 cut(s)	1319
BspPI	GGATC	6 cut(s)	12, 389, 886, 1627, 1640, 2206
BspT104I	TTCGAA	1 cut(s)	1839
BspT107I	GGYRCC	1 cut(s)	2080
BsrDI	GCAATG	2 cut(s)	861, 1273
BsrFI	RCCGGY	2 cut(s)	579, 1776
BsrGI	TGTACA	2 cut(s)	717, 774
BsrI	ACTGG	6 cut(s)	674, 1096, 1208, 1556, 1715, 1911
BssAI	RCCGGY	2 cut(s)	579, 1776
BssECI	CCNNGG	6 cut(s)	816, 1139, 1224, 1260, 1594, 1766
BssMI	GATC	8 cut(s)	4, 381, 865, 891, 1632, 1846, 2198, 2223
BssNAI	GTATAC	1 cut(s)	827
BssT1I	CCWWGG	4 cut(s)	816, 1224, 1260, 1766
Bst1107I	GTATAC	1 cut(s)	827
Bst2UI	CCWGG	1 cut(s)	1682
Bst4CI	ACNGT	4 cut(s)	831, 885, 1294, 1939
Bst6I	CTCTTC	2 cut(s)	1920, 2186
BstAPI	GCANNNNNTGC	2 cut(s)	445, 860
BstAUI	TGTACA	2 cut(s)	717, 774
BstBAI	YACGTR	1 cut(s)	2182
BstBI	TTCGAA	1 cut(s)	1839
BstC8I	GCNNGC	9 cut(s)	312, 341, 345, 391, 509, 1343, 1798, 2014, 2043
BstDEI	CTNAG	9 cut(s)	251, 795, 847, 1020, 1411, 1559, 1617, 1747, 2020
BstDSI	CCRYGG	1 cut(s)	1260
BstENI	CCTNNNNNAGG	1 cut(s)	1575
BstF5I	GGATG	5 cut(s)	816, 1415, 1831, 2113, 2319
BstFNI	CGCG	1 cut(s)	1434
BstKTI	GATC	8 cut(s)	7, 384, 868, 894, 1635, 1849, 2201, 2226
BstMAI	GTCTC	4 cut(s)	158, 1242, 1546, 2081
BstMBI	GATC	8 cut(s)	4, 381, 865, 891, 1632, 1846, 2198, 2223
BstMWI	GCNNNNNNNGC	6 cut(s)	276, 445, 860, 1058, 2147, 2156
BstNI	CCWGG	1 cut(s)	1682
BstNSI	RCATGY	3 cut(s)	314, 775, 1727
BstSCI	CCNGG	2 cut(s)	1593, 1680
BstSFI	CTRYAG	6 cut(s)	449, 1047, 1062, 1783, 1983, 2046
BstSLI	GKGCMC	1 cut(s)	876
BstUI	CGCG	1 cut(s)	1434
BstV1I	GCAGC	4 cut(s)	435, 586, 940, 1048
BstV2I	GAAGAC	2 cut(s)	59, 797
BstX2I	RGATCY	3 cut(s)	4, 1632, 1846
BstXI	CCANNNNNNTGG	1 cut(s)	377
BstYI	RGATCY	3 cut(s)	4, 1632, 1846
BstZ17I	GTATAC	1 cut(s)	827
BsuRI	GGCC	5 cut(s)	948, 1036, 1605, 2041, 2172
BtgI	CCRYGG	1 cut(s)	1260
BtsCI	GGATG	5 cut(s)	816, 1415, 1831, 2113, 2319
BtsI	GCAGTG	4 cut(s)	56, 400, 1071, 2118
BtsIMutI	CAGTG	5 cut(s)	56, 215, 400, 1071, 2118
BtuMI	TCGCGA	1 cut(s)	1434
BveI	ACCTGC	1 cut(s)	1319
Cac8I	GCNNGC	9 cut(s)	312, 341, 345, 391, 509, 1343, 1798, 2014, 2043
CaiI	CAGNNNCTG	1 cut(s)	1019
Cfr10I	RCCGGY	2 cut(s)	579, 1776
Cfr13I	GGNCC	5 cut(s)	645, 946, 1568, 1763, 2264
CsiI	ACCWGGT	1 cut(s)	1680
Csp6I	GTAC	7 cut(s)	367, 718, 775, 958, 1016, 1503, 1774
CspAI	ACCGGT	1 cut(s)	579
CviQI	GTAC	7 cut(s)	367, 718, 775, 958, 1016, 1503, 1774
DdeI	CTNAG	9 cut(s)	251, 795, 847, 1020, 1411, 1559, 1617, 1747, 2020
DpnI	GATC	8 cut(s)	6, 383, 867, 893, 1634, 1848, 2200, 2225
DpnII	GATC	8 cut(s)	4, 381, 865, 891, 1632, 1846, 2198, 2223
DraIII	CACNNNGTG	1 cut(s)	445
DrdI	GACNNNNNNGTC	1 cut(s)	1761
DseDI	GACNNNNNNGTC	1 cut(s)	1761
Eam1104I	CTCTTC	2 cut(s)	1920, 2186
EarI	CTCTTC	2 cut(s)	1920, 2186
Eco130I	CCWWGG	4 cut(s)	816, 1224, 1260, 1766
Eco147I	AGGCCT	1 cut(s)	2041
Eco47I	GGWCC	4 cut(s)	645, 1568, 1763, 2264
Eco88I	CYCGRG	1 cut(s)	315
EcoNI	CCTNNNNNAGG	1 cut(s)	1575
EcoO109I	RGGNCCY	2 cut(s)	645, 1568
EcoRI	GAATTC	1 cut(s)	1868
EcoRII	CCWGG	1 cut(s)	1680
EcoT14I	CCWWGG	4 cut(s)	816, 1224, 1260, 1766
EcoT22I	ATGCAT	2 cut(s)	1273, 2296
ErhI	CCWWGG	4 cut(s)	816, 1224, 1260, 1766
FaqI	GGGAC	9 cut(s)	496, 578, 658, 1306, 1697, 1703, 1767, 1960, 2277
FbaI	TGATCA	1 cut(s)	2223
FblI	GTMKAC	2 cut(s)	826, 2319
Fnu4HI	GCNGC	5 cut(s)	22, 449, 575, 954, 1062
FokI	GGATG	5 cut(s)	823, 1402, 1838, 2120, 2326
Fsp4HI	GCNGC	5 cut(s)	22, 449, 575, 954, 1062
FspBI	CTAG	7 cut(s)	227, 935, 1301, 1325, 1577, 2219, 2303
GluI	GCNGC	5 cut(s)	22, 449, 575, 954, 1062
GsaI	CCCAGC	2 cut(s)	1640, 1673
HaeIII	GGCC	5 cut(s)	948, 1036, 1605, 2041, 2172
HapII	CCGG	4 cut(s)	8, 580, 1594, 1777
HinfI	GANTC	8 cut(s)	44, 220, 736, 793, 931, 1002, 1010, 2089
HpaII	CCGG	4 cut(s)	8, 580, 1594, 1777
HphI	GGTGA	6 cut(s)	105, 146, 512, 898, 2068, 2080
Hpy166II	GTNNAC	4 cut(s)	127, 827, 1819, 2320
Hpy188I	TCNGA	8 cut(s)	78, 163, 364, 798, 850, 1140, 1882, 2023
Hpy8I	GTNNAC	4 cut(s)	127, 827, 1819, 2320
HpyAV	CCTTC	5 cut(s)	34, 266, 448, 1430, 2179
HpyCH4III	ACNGT	4 cut(s)	831, 885, 1294, 1939
HpyCH4IV	ACGT	1 cut(s)	2181
HpyF10VI	GCNNNNNNNGC	6 cut(s)	276, 445, 860, 1058, 2147, 2156
HpyF3I	CTNAG	9 cut(s)	251, 795, 847, 1020, 1411, 1559, 1617, 1747, 2020
HpySE526I	ACGT	1 cut(s)	2181
KflI	GGGWCCC	1 cut(s)	645
Kpn2I	TCCGGA	1 cut(s)	7
Ksp22I	TGATCA	1 cut(s)	2223
Kzo9I	GATC	8 cut(s)	4, 381, 865, 891, 1632, 1846, 2198, 2223
LmnI	GCTCC	5 cut(s)	329, 355, 553, 1394, 2128
Lsp1109I	GCAGC	4 cut(s)	435, 586, 940, 1048
LweI	GCATC	7 cut(s)	708, 979, 1280, 1424, 1710, 2098, 2303
MabI	ACCWGGT	1 cut(s)	1680
MaeI	CTAG	7 cut(s)	227, 935, 1301, 1325, 1577, 2219, 2303
MaeII	ACGT	1 cut(s)	2181
MaeIII	GTNAC	4 cut(s)	395, 1231, 1303, 1657
MalI	GATC	8 cut(s)	6, 383, 867, 893, 1634, 1848, 2200, 2225
MboI	GATC	8 cut(s)	4, 381, 865, 891, 1632, 1846, 2198, 2223
MboII	GAAGA	9 cut(s)	64, 718, 802, 1348, 1462, 1931, 1937, 2203, 2224
MflI	RGATCY	3 cut(s)	4, 1632, 1846
MhlI	GDGCHC	3 cut(s)	110, 137, 876
MlyI	GAGTC	2 cut(s)	787, 2083
MmeI	TCCRAC	2 cut(s)	788, 2103
Mph1103I	ATGCAT	2 cut(s)	1273, 2296
MroI	TCCGGA	1 cut(s)	7
MroXI	GAANNNNTTC	1 cut(s)	1872
MseI	TTAA	5 cut(s)	1028, 1211, 1475, 2279, 2329
MslI	CAYNNNNRTG	4 cut(s)	375, 582, 1301, 1824
MspI	CCGG	4 cut(s)	8, 580, 1594, 1777
MspR9I	CCNGG	2 cut(s)	1595, 1682
Mva1269I	GAATGC	1 cut(s)	2283
MvaI	CCWGG	1 cut(s)	1682
MvnI	CGCG	1 cut(s)	1434
MwoI	GCNNNNNNNGC	6 cut(s)	276, 445, 860, 1058, 2147, 2156
NciI	CCSGG	1 cut(s)	1595
NcoI	CCATGG	1 cut(s)	1260
NdeII	GATC	8 cut(s)	4, 381, 865, 891, 1632, 1846, 2198, 2223
NlaIV	GGNNCC	8 cut(s)	6, 646, 647, 1390, 1449, 1634, 2082, 2265
NmeAIII	GCCGAG	1 cut(s)	286
NmuCI	GTSAC	2 cut(s)	395, 1303
NruI	TCGCGA	1 cut(s)	1434
NsiI	ATGCAT	2 cut(s)	1273, 2296
NspI	RCATGY	3 cut(s)	314, 775, 1727
NspV	TTCGAA	1 cut(s)	1839
PaeI	GCATGC	1 cut(s)	314
PceI	AGGCCT	1 cut(s)	2041
PciI	ACATGT	2 cut(s)	771, 1723
PcsI	WCGNNNNNNNCGW	1 cut(s)	313
PctI	GAATGC	1 cut(s)	2283
PdmI	GAANNNNTTC	1 cut(s)	1872
PfeI	GAWTC	6 cut(s)	44, 220, 736, 931, 1002, 1010
PflMI	CCANNNNNTGG	1 cut(s)	1551
PinAI	ACCGGT	1 cut(s)	579
PkrI	GCNGC	5 cut(s)	23, 450, 576, 955, 1063
PleI	GAGTC	2 cut(s)	787, 2083
PpsI	GAGTC	2 cut(s)	787, 2083
Ppu21I	YACGTR	1 cut(s)	2182
PpuMI	RGGWCCY	2 cut(s)	645, 1568
PscI	ACATGT	2 cut(s)	771, 1723
PsiI	TTATAA	2 cut(s)	1289, 1424
Psp5II	RGGWCCY	2 cut(s)	645, 1568
Psp6I	CCWGG	1 cut(s)	1680
PspFI	CCCAGC	2 cut(s)	1636, 1669
PspGI	CCWGG	1 cut(s)	1680
PspN4I	GGNNCC	8 cut(s)	6, 646, 647, 1390, 1449, 1634, 2082, 2265
PspPI	GGNCC	5 cut(s)	645, 946, 1568, 1763, 2264
PspPPI	RGGWCCY	2 cut(s)	645, 1568
PstI	CTGCAG	2 cut(s)	453, 1066
PstNI	CAGNNNCTG	1 cut(s)	1019
PsuI	RGATCY	3 cut(s)	4, 1632, 1846
RruI	TCGCGA	1 cut(s)	1434
RsaI	GTAC	7 cut(s)	368, 719, 776, 959, 1017, 1504, 1775
RsaNI	GTAC	7 cut(s)	367, 718, 775, 958, 1016, 1503, 1774
RseI	CAYNNNNRTG	4 cut(s)	375, 582, 1301, 1824
SaqAI	TTAA	5 cut(s)	1028, 1211, 1475, 2279, 2329
SatI	GCNGC	5 cut(s)	22, 449, 575, 954, 1062
Sau3AI	GATC	8 cut(s)	4, 381, 865, 891, 1632, 1846, 2198, 2223
Sau96I	GGNCC	5 cut(s)	645, 946, 1568, 1763, 2264
SchI	GAGTC	2 cut(s)	787, 2083
ScrFI	CCNGG	2 cut(s)	1595, 1682
SduI	GDGCHC	3 cut(s)	110, 137, 876
SexAI	ACCWGGT	1 cut(s)	1680
SfaNI	GCATC	7 cut(s)	708, 979, 1280, 1424, 1710, 2098, 2303
SfcI	CTRYAG	6 cut(s)	449, 1047, 1062, 1783, 1983, 2046
SfuI	TTCGAA	1 cut(s)	1839
SinI	GGWCC	4 cut(s)	645, 1568, 1763, 2264
SmiMI	CAYNNNNRTG	4 cut(s)	375, 582, 1301, 1824
SmlI	CTYRAG	1 cut(s)	2245
SmoI	CTYRAG	1 cut(s)	2245
SphI	GCATGC	1 cut(s)	314
SseBI	AGGCCT	1 cut(s)	2041
SsiI	CCGC	1 cut(s)	22
SspMI	CTAG	7 cut(s)	227, 935, 1301, 1325, 1577, 2219, 2303
StuI	AGGCCT	1 cut(s)	2041
StyD4I	CCNGG	2 cut(s)	1593, 1680
StyI	CCWWGG	4 cut(s)	816, 1224, 1260, 1766
TaaI	ACNGT	4 cut(s)	831, 885, 1294, 1939
TaiI	ACGT	1 cut(s)	2184
TaqI	TCGA	7 cut(s)	413, 425, 566, 890, 1103, 1839, 2201
TaqII	GACCGA	1 cut(s)	1866
TatI	WGTACW	2 cut(s)	717, 774
TauI	GCSGC	1 cut(s)	24
TfiI	GAWTC	6 cut(s)	44, 220, 736, 931, 1002, 1010
Tru1I	TTAA	5 cut(s)	1028, 1211, 1475, 2279, 2329
Tru9I	TTAA	5 cut(s)	1028, 1211, 1475, 2279, 2329
TscAI	CASTG	5 cut(s)	63, 222, 400, 1071, 2118
TseFI	GTSAC	2 cut(s)	395, 1303
TseI	GCWGC	4 cut(s)	448, 574, 953, 1061
Tsp45I	GTSAC	2 cut(s)	395, 1303
TspRI	CASTG	5 cut(s)	63, 222, 400, 1071, 2118
Van91I	CCANNNNNTGG	1 cut(s)	1551
VpaK11BI	GGWCC	4 cut(s)	645, 1568, 1763, 2264
XagI	CCTNNNNNAGG	1 cut(s)	1575
XapI	RAATTY	7 cut(s)	779, 1170, 1182, 1520, 1868, 1960, 2254
XbaI	TCTAGA	1 cut(s)	2302
XceI	RCATGY	3 cut(s)	314, 775, 1727
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1200
XmiI	GTMKAC	2 cut(s)	826, 2319
XmnI	GAANNNNTTC	1 cut(s)	1872
XspI	CTAG	7 cut(s)	227, 935, 1301, 1325, 1577, 2219, 2303
Zsp2I	ATGCAT	2 cut(s)	1273, 2296

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.