Belongs to the class-I aminoacyl-tRNA synthetase family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g27140 FvH4_1g27141 FvH4_3g27323 FvH4_3g27500 FvH4_4g11000 FvH4_4g11041 FvH4_4g11064 FvH4_5g27942 FvH4_5g27942 FvH4_7g05920 FvH4_7g06405 FvH4_7g06406 |
| malus_domestica | MD03G1160800.v1.1 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 216 |
| AclWI | GGATC | 1 cut(s) | 284 |
| AcoI | YGGCCR | 1 cut(s) | 285 |
| AfaI | GTAC | 3 cut(s) | 8, 62, 122 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 100 |
| AgsI | TTSAA | 1 cut(s) | 69 |
| Alw26I | GTCTC | 3 cut(s) | 138, 169, 187 |
| AlwI | GGATC | 1 cut(s) | 284 |
| AoxI | GGCC | 1 cut(s) | 285 |
| AspLEI | GCGC | 2 cut(s) | 42, 52 |
| BceAI | ACGGC | 1 cut(s) | 300 |
| BclI | TGATCA | 1 cut(s) | 232 |
| BcoDI | GTCTC | 3 cut(s) | 138, 169, 187 |
| BisI | GCNGC | 1 cut(s) | 216 |
| BlsI | GCNGC | 1 cut(s) | 217 |
| BpuEI | CTTGAG | 3 cut(s) | 113, 200, 218 |
| BsaJI | CCNNGG | 1 cut(s) | 116 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 100 |
| Bse1I | ACTGG | 2 cut(s) | 58, 271 |
| BseDI | CCNNGG | 1 cut(s) | 116 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 100 |
| BseNI | ACTGG | 2 cut(s) | 58, 271 |
| BshFI | GGCC | 1 cut(s) | 287 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 100 |
| BsmAI | GTCTC | 3 cut(s) | 138, 169, 187 |
| BsmI | GAATGC | 2 cut(s) | 141, 172 |
| BsnI | GGCC | 1 cut(s) | 287 |
| Bsp143I | GATC | 2 cut(s) | 232, 276 |
| Bsp19I | CCATGG | 1 cut(s) | 116 |
| BspACI | CCGC | 1 cut(s) | 216 |
| BspANI | GGCC | 1 cut(s) | 287 |
| BspPI | GGATC | 1 cut(s) | 284 |
| BsrI | ACTGG | 2 cut(s) | 58, 271 |
| BssECI | CCNNGG | 1 cut(s) | 116 |
| BssMI | GATC | 2 cut(s) | 232, 276 |
| BssT1I | CCWWGG | 1 cut(s) | 116 |
| BstDEI | CTNAG | 1 cut(s) | 171 |
| BstDSI | CCRYGG | 1 cut(s) | 116 |
| BstHHI | GCGC | 2 cut(s) | 42, 52 |
| BstKTI | GATC | 2 cut(s) | 235, 279 |
| BstMAI | GTCTC | 3 cut(s) | 138, 169, 187 |
| BstMBI | GATC | 2 cut(s) | 232, 276 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 224 |
| BsuRI | GGCC | 1 cut(s) | 287 |
| BtgI | CCRYGG | 1 cut(s) | 116 |
| BtsIMutI | CAGTG | 1 cut(s) | 278 |
| CfoI | GCGC | 2 cut(s) | 42, 52 |
| Csp6I | GTAC | 3 cut(s) | 7, 61, 121 |
| CviAII | CATG | 1 cut(s) | 117 |
| CviJI | RGCY | 2 cut(s) | 239, 287 |
| CviKI_1 | RGCY | 2 cut(s) | 239, 287 |
| CviQI | GTAC | 3 cut(s) | 7, 61, 121 |
| DdeI | CTNAG | 1 cut(s) | 171 |
| DpnI | GATC | 2 cut(s) | 234, 278 |
| DpnII | GATC | 2 cut(s) | 232, 276 |
| EaeI | YGGCCR | 1 cut(s) | 285 |
| Eco130I | CCWWGG | 1 cut(s) | 116 |
| EcoT14I | CCWWGG | 1 cut(s) | 116 |
| ErhI | CCWWGG | 1 cut(s) | 116 |
| FaeI | CATG | 1 cut(s) | 120 |
| FaiI | YATR | 2 cut(s) | 16, 118 |
| FatI | CATG | 1 cut(s) | 116 |
| FbaI | TGATCA | 1 cut(s) | 232 |
| Fnu4HI | GCNGC | 1 cut(s) | 216 |
| Fsp4HI | GCNGC | 1 cut(s) | 216 |
| GlaI | GCGC | 2 cut(s) | 41, 51 |
| GluI | GCNGC | 1 cut(s) | 216 |
| HaeIII | GGCC | 1 cut(s) | 287 |
| HhaI | GCGC | 2 cut(s) | 42, 52 |
| Hin1II | CATG | 1 cut(s) | 120 |
| Hin6I | GCGC | 2 cut(s) | 40, 50 |
| HinP1I | GCGC | 2 cut(s) | 40, 50 |
| Hpy188III | TCNNGA | 4 cut(s) | 69, 146, 163, 315 |
| HpyAV | CCTTC | 2 cut(s) | 66, 70 |
| HpyCH4IV | ACGT | 3 cut(s) | 63, 105, 150 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 141, 188 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 224 |
| HpyF3I | CTNAG | 1 cut(s) | 171 |
| HpySE526I | ACGT | 3 cut(s) | 63, 105, 150 |
| Hsp92II | CATG | 1 cut(s) | 120 |
| HspAI | GCGC | 2 cut(s) | 40, 50 |
| Ksp22I | TGATCA | 1 cut(s) | 232 |
| Kzo9I | GATC | 2 cut(s) | 232, 276 |
| LpnPI | CCDG | 5 cut(s) | 45, 71, 131, 176, 284 |
| MaeII | ACGT | 3 cut(s) | 63, 105, 150 |
| MalI | GATC | 2 cut(s) | 234, 278 |
| MboI | GATC | 2 cut(s) | 232, 276 |
| MluCI | AATT | 1 cut(s) | 21 |
| MnlI | CCTC | 1 cut(s) | 200 |
| MseI | TTAA | 1 cut(s) | 24 |
| Mva1269I | GAATGC | 2 cut(s) | 141, 172 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 224 |
| NcoI | CCATGG | 1 cut(s) | 116 |
| NdeII | GATC | 2 cut(s) | 232, 276 |
| NlaIII | CATG | 1 cut(s) | 120 |
| PctI | GAATGC | 2 cut(s) | 141, 172 |
| PkrI | GCNGC | 1 cut(s) | 217 |
| RsaI | GTAC | 3 cut(s) | 8, 62, 122 |
| RsaNI | GTAC | 3 cut(s) | 7, 61, 121 |
| SaqAI | TTAA | 1 cut(s) | 24 |
| SatI | GCNGC | 1 cut(s) | 216 |
| Sau3AI | GATC | 2 cut(s) | 232, 276 |
| SetI | ASST | 4 cut(s) | 21, 66, 108, 153 |
| SmlI | CTYRAG | 3 cut(s) | 128, 179, 197 |
| SmoI | CTYRAG | 3 cut(s) | 128, 179, 197 |
| Sse9I | AATT | 1 cut(s) | 21 |
| SsiI | CCGC | 1 cut(s) | 216 |
| StyI | CCWWGG | 1 cut(s) | 116 |
| TaiI | ACGT | 3 cut(s) | 66, 108, 153 |
| TaqII | GACCGA | 1 cut(s) | 300 |
| TasI | AATT | 1 cut(s) | 21 |
| TauI | GCSGC | 1 cut(s) | 218 |
| Tru1I | TTAA | 1 cut(s) | 24 |
| Tru9I | TTAA | 1 cut(s) | 24 |
| TscAI | CASTG | 1 cut(s) | 278 |
| TspRI | CASTG | 1 cut(s) | 278 |