Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0015430

Physical Location & Seq

Genomic Coordinates Reverse (-)

7070395 .. 7075575

Gene Structure 5181 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g07120.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3792 bp

ATGGGGAGTGCTGATGCCAACAAGCTCAGATTTTGCATTGACAGAGGGGGCACATTCACTGATGTTTATGCTCAGGTCCCAGGTCAGCCTGATGGTCGTGTTTTGAAACTTTTATCGGTTGATCCATCAAACTATGATGATGCTCCAGTGGAAGGAATTCGGAGAATTTTAGAAGAATTTACAGGGCAGAAAATTTCCCGTTGTTCGAAGTTGCCAACTGATAAGATAGAGTGGATAAGGATGGGTACAACTGTTGCTACTAATGCACTTTTGGAGAGGAAAGGGGAAAGCATTGCTCTTTGTGTTACTCGGGGTTTCCGGAATTTGCTGCAGATTGGTAACCAGGCTCGTCCAAATATTTTTGACCTCACTGTATCTAAACCGTCAAACCTTTATGAGGAAGTTATTGAGGTTGATGAGAGAGTTGAGCTCGTTCATGATACTAAAGATTCTAGATCTGCGTCATTAGTTAAAGGGGTTTCTGGTGAGATGGTTAAAGTGGTAAAGCCTCTAGATGTAGAAATGTTAAAGCCATTACTCAAGGGTTTGTTGGAGAAGGGAATTAGTTGTTTGGCAGTTGTGTTAATGCATTCGTACACTTACCCGCAACATGAAATAGCTGTTGAAAGATTAGCAGCTAGTATGGGCTTTAAACATGTTTCCTTATCCTCAGCTTTGACACCTATGGTTCGAGCTGTTCCTCGGGGTCTAACAGCTAGTGTTGATGCATATTTGACTCCAGTGATCAAAGAGTACTTATCAGGGTTCATATCTAAGTTTGATGAAGGGCTGGGGAAGGTGAATGTTTTGTTCATGCAATCTGATGGAGGACTTGCACCAGAAAGTCGATTTTCAGGCCACAAAGCTGTTTTGTCAGGTCCTGCTGGTGGGGTTGTGGGTTACTCTCAGACACTTTTTGGGCTTGAAACAGAGAAACCTCTTATTGGATTTGACATGGGTGGCACGTCTACTGATGTGAGCCGTTATGCTGGGACTTATGAACAAGTTCTGGAAACTCAAATTGCTGGTGCCATAATACAAGCACCTCAACTCGACATAAATACTGTAGCTGCTGGTGGCGGATCAAAGTTGAAGTTCCAATTTGGTGCTTTTCGGGTAGGACCAGAATCAGTGGGTGCACATCCAGGTCCAGTCTGTTACCGTAAAGGTGGGGAATTAGCAGTTACAGATGCAAACTTAGTCCTCGGATATGTAATTCCTGATTATTTCCCATCAATTTTTGGCTCCAATGAAGATCAGCCTTTAGATATTGAGGAAACAAGAAAAGAATTTGAAAATCTTGCTGAGCAAATAAATTCCTATCGGAAGAGCCAGGATCCATTTGCAAAGGACATGACAGTGGAGGACATTGCACTGGGATTTGTGAATGTTGCCAATGAGACCATGTGCCGTCCGATAAGGCAATTAACTGAGATGAAGGGTCATGAAACAAAGGATCATGCACTTGCCTGCTTTGGAGGTGCTGGGCCTCAACATGCATGTGCAATTGCTCGGTCATTGGGTATGAAAGAAGTACTCATACACAGGTTTTGTGGAATCTTAAGTGCTTATGGGATGGGATTGGCAGATGTTGTTGAGGAGGTACAGGAGCCATACTCTGCGATTTACTGTCTGGATTCTGTCCAGGAGGCCTCTCACAGAGAAGCCGCTTTACTGAGTCAAGTAAAGCAGAAGTTGCAAGAGCAAGGTTTTAGAGATGAAAATATAAAAACAGAGACATATTTGAATTTGAGATATGAAGGTACAGACACCTCAATCATGGTTAAAAAACGACAAGATGGAGATTGCAAGTATGATCTGGACTTTGTGGAACTATTCCAGCAGGAGTACGGATTTAAATTACTGAATAGGAATATCCTAGTAAGCGATGTTAGGGTTCGTGGGGTAGGAGTGACTAATATATTGAAGCCATTGGCTCTGGAATCTGCATCAAGTTCTCCTAAAGTTGAAGGTAACTACAAGGTTTATTTTGAGTATGGGTGGCAAGAAACACCTCTATACAAGCTTGAGAATCTGGGCTACGGGAATGTCATGCAAGGTCCAGCAATAATTATGAATGGGAATAGTACTGTGATAGTGGAACCTAGGTGCAAAGCTATGATAACCAAGTATGGCAACATTAAAATTGAAATCGAGTCTGCTTCAAACACCCTGAAAGTAGCAGAAAAGGTTGCAAATGTTGTGCAGCTCTCAATCTTTAATCATAGATTTATGGGTATAGCTGAACAGATGGGAAGGACCCTACAGAGAACCTCTATATCAACTAACATCAAGGAACGGCTAGATTTCTCGTGTGCCCTCTTTGGACCTGATGGGGGATTAGTTGCTAATGCTCCTCACGTCCCTGTGCACTTAGGAGCAATGTCTAGTACTGTTCGGTGGCAGCTCAACTATTGGGGTGAAAATTTGAATGAAGGAGATGTTTTGGTCACCAATCATCCTTGTGCAGGAGGTAGCCATCTTCCTGATATAACAGTTATTACACCTGTGTTTGATAATGGAAAGCTGGTATTTTTTGTGGCAAGTAGAGGGCACCATGCAGAGATTGGAGGTATTACTCCTGGAAGCATGCCACCATTTTCCAAGTCGATATGGGAAGAAGGGGCTGCTATAAAAGCATTTAAGCTTGTTGAAAAGGGGATTTTTCAAGAAGAAGGAATTACTAAACTTCTCCGCTTCCCCTCTTCTGATGACCTGGCACAAAAGATCCCGGGAACTCGAAGGCTTCAAGATAACTTATCAGATCTTCAAGCCCAAGTAGCTGCAAACCAGAGAGGAATTACTCTTATTAAAGAGCTTATTGAGCAGTATGGTTTGGAAACAGTACAGGCTTACATGACCTATGTGCAGCTGAATGCAGAAGAAGCAGTGAGAGAAATGCTAAAGTCTGTCGCGGCAAGAGTTTTATCTCAGTCAGCCAGGACTGGAGATAAGAGTTCGGTCACTATAGAAGAAGAGGATTACATGGATGATGGATCCATTATTCATCTGAAGCTTACAATTGATTCGGTCAAAGGTGAAGCAAATTTTGACTTCAGTGGAACCAGTCCTGAAGTATATGGGAATTGGAATGCTCCAGAAGCCGTAACAGCTGCAGCAGTTATATACTGTCTTCGCTGCTTGGTGGATGTTGATATTCCATTGAATCAAGGTTGTTTGGCTCCTGTGAAAATCTACATTCCACCTGGATCATTCCTCTCTCCAAGTGATAAGGCCGCTGTGGTGGGTGGTAACGTTCTCACTTCTCAGAGAATAACTGATGTTGTACTTACTGCATTTCAGGCTTGTGCTTGCTCACAGGGTTGTATGAATAATCTCACTTTTGGGGATGACACATTTGGTTATTACGAAACAATTGGAGGTGGGAGTGGAGCTGGTCCATCCTGGGATGGGACCAGTGGAGTCCAGTGTCATATGACCAATACCCGAATGACTGATCCAGAAATATTTGAACAGAGATATCCTGTTATCTTGCATAAGTTTGCCCTCAGAGAGAATAGTGGAGGAGTTGGATATCATAGAGGTGGTAATGGGCTTGTGAGGGAGATAGAGTTCAAGCGCCCAGTTGTTGTGAGCATTCTTTCAGAGAGGCGTGTTCATGCCCCGAGAGGGTTGAAAGGAGGGGAGGATGGCTCTCGCGGAGCTAACTACCTAATCACAAAAGATAAAAGAAGGGTTTACCTGGGTGGTAAGAACACAGTTGAGGTGCAGTCAGGGGAAATTCTTCAGATTTTGACTCCTGGTGGTGGTGGATGGGGCTCTCCTCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005911 GO:0006518 GO:0006575 GO:0006749 GO:0006751 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009506 GO:0009987 GO:0016787 GO:0016810 GO:0016812 GO:0017168 GO:0030054 GO:0034641 GO:0042219 GO:0043171 GO:0043603 GO:0044237 GO:0044248 GO:0044273 GO:0044424 GO:0044444 GO:0044464 GO:0051186 GO:0051187 GO:0055044 GO:0071704 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00480 map00480

Pfam Domains

Protein Families

Hydant_A_N Hydantoinase_A Hydantoinase_B

Protein Analysis

1264

Amino Acids

137.71

Weight (kDa)

5.66

Isoelectric Point (pI)

38.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Hydant_A_N	PF05378	10 - 215	6.7e-57	Hydantoinase/oxoprolinase N-terminal region
Hydantoinase_A	PF01968	235 - 534	1.6e-106	Hydantoinase/oxoprolinase
Hydant_A_C	PF19278	557 - 711	7.8e-09	Hydantoinase/oxoprolinase C-terminal domain
Hydantoinase_B	PF02538	735 - 1262	6.9e-215	Hydantoinase B/oxoprolinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0015430)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G37830
fragaria_vesca	FvH4_7g07120 FvH4_7g07120
malus_domestica	MD07G1077100.v1.1
prunus_persica	Prupe.2G098100_v2.0.a1
pyrus_communis	pycom07g06060
rosa_chinensis	RchiOBHm_Chr1g0337071
rosa_laevigata	RLG00000029307
rosa_multiflora	Rmu_sc0010164.1_g000003
rosa_roxburghii	Rroxscaffold_4G00314980
rosa_rugosa	Rorug01G0130900
rosa_samantha	Rh1AG151600 Rh1BG120200 Rh1CG142800 Rh1DG158800
rosa_wichuraiana	Rw1G012400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	1028, 2553
AccI	GTMKAC	1 cut(s)	968
AccII	CGCG	2 cut(s)	2915, 3660
AccIII	TCCGGA	1 cut(s)	318
AciI	CCGC	7 cut(s)	605, 1080, 1668, 2695, 2915, 3237, 3660
AclI	AACGTT	1 cut(s)	3255
AcuI	CTGAAG	4 cut(s)	3032, 3040, 3093, 3731
AfiI	CCNNNNNNNGG	9 cut(s)	152, 397, 887, 944, 2336, 2468, 3411, 3630, 3767
AflII	CTTAAG	1 cut(s)	1561
AflIII	ACRYGT	1 cut(s)	655
AjiI	CACGTC	2 cut(s)	966, 2362
AloI	GAACNNNNNNTCC	2 cut(s)	3557, 3589
Alw21I	GWGCWC	3 cut(s)	432, 1141, 2373
Alw26I	GTCTC	2 cut(s)	1394, 1730
Alw44I	GTGCAC	2 cut(s)	1137, 2369
AlwNI	CAGNNNCTG	1 cut(s)	881
Ama87I	CYCGRG	4 cut(s)	309, 702, 2731, 3625
Aor13HI	TCCGGA	1 cut(s)	318
AoxI	GGCC	4 cut(s)	856, 1487, 1650, 3234
ApaLI	GTGCAC	2 cut(s)	1137, 2369
Asp700I	GAANNNNTTC	3 cut(s)	156, 1005, 3744
AspA2I	CCTAGG	1 cut(s)	2105
AspLEI	GCGC	1 cut(s)	3582
AsuC2I	CCSGG	2 cut(s)	2732, 2733
AsuHPI	GGTGA	5 cut(s)	497, 811, 2432, 2443, 3050
AsuII	TTCGAA	1 cut(s)	206
AvaI	CYCGRG	4 cut(s)	309, 702, 2731, 3625
AvaII	GGWCC	9 cut(s)	76, 878, 1121, 1148, 2060, 2259, 2327, 3398, 3414
AvrII	CCTAGG	1 cut(s)	2105
BaeGI	GKGCMC	5 cut(s)	53, 1141, 2320, 2373, 2556
BaeI	ACNNNNGTAYC	2 cut(s)	237, 270
BamHI	GGATCC	2 cut(s)	1336, 2996
BanI	GGYRCC	2 cut(s)	1028, 2553
BanII	GRGCYC	2 cut(s)	432, 3782
BarI	GAAGNNNNNNTAC	4 cut(s)	1524, 1556, 1656, 1688
BauI	CACGAG	1 cut(s)	2311
BbsI	GAAGAC	1 cut(s)	3125
Bbv12I	GWGCWC	3 cut(s)	432, 1141, 2373
BbvCI	CCTCAGC	1 cut(s)	670
BceAI	ACGGC	4 cut(s)	966, 1395, 2315, 3089
BclI	TGATCA	1 cut(s)	744
BcnI	CCSGG	2 cut(s)	2732, 2733
BcoDI	GTCTC	2 cut(s)	1394, 1730
BfaI	CTAG	8 cut(s)	453, 512, 639, 717, 1880, 2106, 2303, 2388
BfmI	CTRYAG	5 cut(s)	329, 1065, 2264, 2967, 3114
BfoI	RGCGCY	1 cut(s)	3583
BfrI	CTTAAG	1 cut(s)	1561
BglII	AGATCT	2 cut(s)	455, 2764
BlnI	CCTAGG	1 cut(s)	2105
BlpI	GCTNAGC	1 cut(s)	1305
BmcAI	AGTACT	4 cut(s)	755, 1536, 2089, 2392
Bme18I	GGWCC	9 cut(s)	76, 878, 1121, 1148, 2060, 2259, 2327, 3398, 3414
BmeT110I	CYCGRG	4 cut(s)	309, 702, 2731, 3625
BmgBI	CACGTC	2 cut(s)	966, 2362
BmrI	ACTGGG	2 cut(s)	1385, 3578
BmsI	GCATC	5 cut(s)	4, 130, 715, 1180, 1958
BmuI	ACTGGG	2 cut(s)	1385, 3578
BpiI	GAAGAC	1 cut(s)	3125
BplI	GAGNNNNNCTC	6 cut(s)	414, 446, 1601, 1633, 3638, 3670
BpmI	CTGGAG	4 cut(s)	129, 723, 2967, 3081
Bpu10I	CCTNAGC	2 cut(s)	72, 670
Bpu1102I	GCTNAGC	1 cut(s)	1305
Bpu14I	TTCGAA	1 cut(s)	206
BpuEI	CTTGAG	2 cut(s)	524, 2048
BpuMI	CCSGG	2 cut(s)	2732, 2733
BsaI	GGTCTC	1 cut(s)	1394
BsaJI	CCNNGG	7 cut(s)	79, 701, 1204, 2105, 2731, 3405, 3703
BsaWI	WCCGGW	1 cut(s)	318
BsaXI	ACNNNNNCTCC	2 cut(s)	3557, 3587
Bsc4I	CCNNNNNNNGG	9 cut(s)	152, 397, 887, 944, 2336, 2468, 3411, 3630, 3767
Bse1I	ACTGG	9 cut(s)	146, 740, 1151, 1380, 2950, 3066, 3417, 3427, 3584
Bse3DI	GCAATG	3 cut(s)	291, 1368, 2388
BseAI	TCCGGA	1 cut(s)	318
BseDI	CCNNGG	7 cut(s)	79, 701, 1204, 2105, 2731, 3405, 3703
BseLI	CCNNNNNNNGG	9 cut(s)	152, 397, 887, 944, 2336, 2468, 3411, 3630, 3767
BseMI	GCAATG	3 cut(s)	291, 1368, 2388
BseNI	ACTGG	9 cut(s)	146, 740, 1151, 1380, 2950, 3066, 3417, 3427, 3584
BseRI	GAGGAG	4 cut(s)	1613, 2346, 3540, 3774
BseSI	GKGCMC	5 cut(s)	53, 1141, 2320, 2373, 2556
BseYI	CCCAGC	3 cut(s)	790, 989, 1484
BsgI	GTGCAG	4 cut(s)	2225, 2487, 2888, 3749
Bsh1236I	CGCG	2 cut(s)	2915, 3660
BshFI	GGCC	4 cut(s)	858, 1489, 1652, 3236
BshNI	GGYRCC	2 cut(s)	1028, 2553
BsiHKAI	GWGCWC	3 cut(s)	432, 1141, 2373
BsiHKCI	CYCGRG	4 cut(s)	309, 702, 2731, 3625
BsiSI	CCGG	2 cut(s)	319, 2732
BslFI	GGGAC	4 cut(s)	62, 1006, 2348, 3427
BslI	CCNNNNNNNGG	9 cut(s)	152, 397, 887, 944, 2336, 2468, 3411, 3630, 3767
BsmAI	GTCTC	2 cut(s)	1394, 1730
BsmFI	GGGAC	4 cut(s)	62, 1006, 2348, 3427
BsmI	GAATGC	4 cut(s)	589, 2881, 3097, 3597
BsnI	GGCC	4 cut(s)	858, 1489, 1652, 3236
Bso31I	GGTCTC	1 cut(s)	1394
BsoBI	CYCGRG	4 cut(s)	309, 702, 2731, 3625
Bsp119I	TTCGAA	1 cut(s)	206
Bsp1286I	GDGCHC	7 cut(s)	53, 432, 1141, 2320, 2373, 2556, 3782
Bsp13I	TCCGGA	1 cut(s)	318
Bsp1720I	GCTNAGC	1 cut(s)	1305
BspACI	CCGC	7 cut(s)	605, 1080, 1668, 2695, 2915, 3237, 3660
BspANI	GGCC	4 cut(s)	858, 1489, 1652, 3236
BspEI	TCCGGA	1 cut(s)	318
BspFNI	CGCG	2 cut(s)	2915, 3660
BspHI	TCATGA	2 cut(s)	436, 1444
BspMAI	CTGCAG	2 cut(s)	333, 3118
BspQI	GCTCTTC	1 cut(s)	1322
BspT104I	TTCGAA	1 cut(s)	206
BspT107I	GGYRCC	2 cut(s)	1028, 2553
BspTI	CTTAAG	1 cut(s)	1561
BspTNI	GGTCTC	1 cut(s)	1394
BsrDI	GCAATG	3 cut(s)	291, 1368, 2388
BsrI	ACTGG	9 cut(s)	146, 740, 1151, 1380, 2950, 3066, 3417, 3427, 3584
BssECI	CCNNGG	7 cut(s)	79, 701, 1204, 2105, 2731, 3405, 3703
BssSI	CACGAG	1 cut(s)	2311
BssT1I	CCWWGG	1 cut(s)	2105
Bst2BI	CACGAG	1 cut(s)	2311
Bst6I	CTCTTC	3 cut(s)	1322, 2710, 2970
BstAFI	CTTAAG	1 cut(s)	1561
BstAPI	GCANNNNNTGC	1 cut(s)	1696
BstBI	TTCGAA	1 cut(s)	206
BstC8I	GCNNGC	3 cut(s)	1471, 2591, 3313
BstEII	GGTNACC	2 cut(s)	338, 2449
BstENI	CCTNNNNNAGG	2 cut(s)	395, 2466
BstFNI	CGCG	2 cut(s)	2915, 3660
BstH2I	RGCGCY	1 cut(s)	3583
BstHHI	GCGC	1 cut(s)	3582
BstMAI	GTCTC	2 cut(s)	1394, 1730
BstMWI	GCNNNNNNNGC	9 cut(s)	263, 1696, 2636, 2780, 2824, 2885, 3101, 3110, 3302
BstNSI	RCATGY	4 cut(s)	659, 1499, 1503, 2593
BstPI	GGTNACC	2 cut(s)	338, 2449
BstSFI	CTRYAG	5 cut(s)	329, 1065, 2264, 2967, 3114
BstSLI	GKGCMC	5 cut(s)	53, 1141, 2320, 2373, 2556
BstUI	CGCG	2 cut(s)	2915, 3660
BstV2I	GAAGAC	1 cut(s)	3125
BstX2I	RGATCY	5 cut(s)	455, 1336, 2727, 2764, 2996
BstYI	RGATCY	5 cut(s)	455, 1336, 2727, 2764, 2996
BsuRI	GGCC	4 cut(s)	858, 1489, 1652, 3236
BtgZI	GCGATG	1 cut(s)	1902
BtrI	CACGTC	2 cut(s)	966, 2362
BtsI	GCAGTG	1 cut(s)	2895
Cac8I	GCNNGC	3 cut(s)	1471, 2591, 3313
CaiI	CAGNNNCTG	1 cut(s)	881
CciI	TCATGA	2 cut(s)	436, 1444
CfoI	GCGC	1 cut(s)	3582
Cfr9I	CCCGGG	1 cut(s)	2731
CseI	GACGC	1 cut(s)	450
DraI	TTTAAA	2 cut(s)	652, 1858
Eam1104I	CTCTTC	3 cut(s)	1322, 2710, 2970
EarI	CTCTTC	3 cut(s)	1322, 2710, 2970
EciI	GGCGGA	1 cut(s)	1095
Ecl136II	GAGCTC	1 cut(s)	430
Eco130I	CCWWGG	1 cut(s)	2105
Eco147I	AGGCCT	1 cut(s)	1652
Eco24I	GRGCYC	2 cut(s)	432, 3782
Eco31I	GGTCTC	1 cut(s)	1394
Eco32I	GATATC	2 cut(s)	3482, 3536
Eco47I	GGWCC	9 cut(s)	76, 878, 1121, 1148, 2060, 2259, 2327, 3398, 3414
Eco53kI	GAGCTC	1 cut(s)	430
Eco57I	CTGAAG	4 cut(s)	3032, 3040, 3093, 3731
Eco88I	CYCGRG	4 cut(s)	309, 702, 2731, 3625
Eco91I	GGTNACC	2 cut(s)	338, 2449
EcoICRI	GAGCTC	1 cut(s)	430
EcoNI	CCTNNNNNAGG	2 cut(s)	395, 2466
EcoO109I	RGGNCCY	3 cut(s)	76, 878, 2259
EcoO65I	GGTNACC	2 cut(s)	338, 2449
EcoRI	GAATTC	1 cut(s)	156
EcoRV	GATATC	2 cut(s)	3482, 3536
EcoT14I	CCWWGG	1 cut(s)	2105
EcoT22I	ATGCAT	3 cut(s)	591, 730, 1501
EcoT38I	GRGCYC	2 cut(s)	432, 3782
ErhI	CCWWGG	1 cut(s)	2105
FaqI	GGGAC	4 cut(s)	62, 1006, 2348, 3427
FauI	CCCGC	1 cut(s)	612
FauNDI	CATATG	1 cut(s)	3435
FbaI	TGATCA	1 cut(s)	744
FblI	GTMKAC	1 cut(s)	968
FriOI	GRGCYC	2 cut(s)	432, 3782
FspBI	CTAG	8 cut(s)	453, 512, 639, 717, 1880, 2106, 2303, 2388
GlaI	GCGC	1 cut(s)	3581
GsaI	CCCAGC	3 cut(s)	794, 993, 1488
GsuI	CTGGAG	4 cut(s)	129, 723, 2967, 3081
HaeII	RGCGCY	1 cut(s)	3583
HaeIII	GGCC	4 cut(s)	858, 1489, 1652, 3236
HapII	CCGG	2 cut(s)	319, 2732
HgaI	GACGC	1 cut(s)	450
HhaI	GCGC	1 cut(s)	3582
Hin6I	GCGC	1 cut(s)	3580
HinP1I	GCGC	1 cut(s)	3580
HindIII	AAGCTT	3 cut(s)	2024, 2645, 3014
HpaII	CCGG	2 cut(s)	319, 2732
HphI	GGTGA	5 cut(s)	497, 811, 2432, 2443, 3050
Hpy166II	GTNNAC	5 cut(s)	597, 969, 1139, 2371, 3700
Hpy8I	GTNNAC	5 cut(s)	597, 969, 1139, 2371, 3700
HpyCH4IV	ACGT	3 cut(s)	965, 2361, 3255
HpyF10VI	GCNNNNNNNGC	9 cut(s)	263, 1696, 2636, 2780, 2824, 2885, 3101, 3110, 3302
HpySE526I	ACGT	3 cut(s)	965, 2361, 3255
HspAI	GCGC	1 cut(s)	3580
Kpn2I	TCCGGA	1 cut(s)	318
Ksp22I	TGATCA	1 cut(s)	744
LguI	GCTCTTC	1 cut(s)	1322
LmnI	GCTCC	9 cut(s)	148, 1250, 1609, 2359, 2378, 3100, 3187, 3392, 3662
LweI	GCATC	5 cut(s)	4, 130, 715, 1180, 1958
MaeI	CTAG	8 cut(s)	453, 512, 639, 717, 1880, 2106, 2303, 2388
MaeII	ACGT	3 cut(s)	965, 2361, 3255
MfeI	CAATTG	3 cut(s)	1506, 3021, 3375
MflI	RGATCY	5 cut(s)	455, 1336, 2727, 2764, 2996
MhlI	GDGCHC	7 cut(s)	53, 432, 1141, 2320, 2373, 2556, 3782
MlyI	GAGTC	5 cut(s)	730, 1687, 2165, 3432, 3751
MmeI	TCCRAC	2 cut(s)	531, 3511
Mph1103I	ATGCAT	3 cut(s)	591, 730, 1501
MroI	TCCGGA	1 cut(s)	318
MroXI	GAANNNNTTC	3 cut(s)	156, 1005, 3744
MslI	CAYNNNNRTG	4 cut(s)	1358, 1500, 2463, 3543
MspA1I	CMGCKG	3 cut(s)	2872, 3113, 3239
MspCI	CTTAAG	1 cut(s)	1561
MspI	CCGG	2 cut(s)	319, 2732
MunI	CAATTG	3 cut(s)	1506, 3021, 3375
Mva1269I	GAATGC	4 cut(s)	589, 2881, 3097, 3597
MvnI	CGCG	2 cut(s)	2915, 3660
MwoI	GCNNNNNNNGC	9 cut(s)	263, 1696, 2636, 2780, 2824, 2885, 3101, 3110, 3302
NciI	CCSGG	2 cut(s)	2732, 2733
NdeI	CATATG	1 cut(s)	3435
NmuCI	GTSAC	3 cut(s)	1912, 2449, 2962
NsiI	ATGCAT	3 cut(s)	591, 730, 1501
NspI	RCATGY	4 cut(s)	659, 1499, 1503, 2593
NspV	TTCGAA	1 cut(s)	206
PaeI	GCATGC	1 cut(s)	2593
PagI	TCATGA	2 cut(s)	436, 1444
PceI	AGGCCT	1 cut(s)	1652
PciI	ACATGT	1 cut(s)	655
PciSI	GCTCTTC	1 cut(s)	1322
PctI	GAATGC	4 cut(s)	589, 2881, 3097, 3597
PdmI	GAANNNNTTC	3 cut(s)	156, 1005, 3744
PfeI	GAWTC	8 cut(s)	449, 1127, 1557, 1637, 1943, 2032, 3026, 3166
PfoI	TCCNGGA	2 cut(s)	1644, 2581
PleI	GAGTC	5 cut(s)	730, 1686, 2164, 3431, 3751
PpsI	GAGTC	5 cut(s)	730, 1686, 2164, 3431, 3751
PpuMI	RGGWCCY	3 cut(s)	76, 878, 2259
PscI	ACATGT	1 cut(s)	655
Psp124BI	GAGCTC	1 cut(s)	432
Psp1406I	AACGTT	1 cut(s)	3255
Psp5II	RGGWCCY	3 cut(s)	76, 878, 2259
PspEI	GGTNACC	2 cut(s)	338, 2449
PspFI	CCCAGC	3 cut(s)	790, 989, 1484
PspPPI	RGGWCCY	3 cut(s)	76, 878, 2259
PstI	CTGCAG	2 cut(s)	333, 3118
PstNI	CAGNNNCTG	1 cut(s)	881
PsuI	RGATCY	5 cut(s)	455, 1336, 2727, 2764, 2996
PvuII	CAGCTG	2 cut(s)	2872, 3113
RseI	CAYNNNNRTG	4 cut(s)	1358, 1500, 2463, 3543
SacI	GAGCTC	1 cut(s)	432
SapI	GCTCTTC	1 cut(s)	1322
ScaI	AGTACT	4 cut(s)	755, 1536, 2089, 2392
SchI	GAGTC	5 cut(s)	730, 1687, 2165, 3432, 3751
SduI	GDGCHC	7 cut(s)	53, 432, 1141, 2320, 2373, 2556, 3782
SfaNI	GCATC	5 cut(s)	4, 130, 715, 1180, 1958
SfcI	CTRYAG	5 cut(s)	329, 1065, 2264, 2967, 3114
SfuI	TTCGAA	1 cut(s)	206
SinI	GGWCC	9 cut(s)	76, 878, 1121, 1148, 2060, 2259, 2327, 3398, 3414
SmaI	CCCGGG	1 cut(s)	2733
SmiI	ATTTAAAT	1 cut(s)	1858
SmiMI	CAYNNNNRTG	4 cut(s)	1358, 1500, 2463, 3543
SmlI	CTYRAG	3 cut(s)	539, 1561, 2027
SmoI	CTYRAG	3 cut(s)	539, 1561, 2027
SphI	GCATGC	1 cut(s)	2593
SseBI	AGGCCT	1 cut(s)	1652
SsiI	CCGC	7 cut(s)	605, 1080, 1668, 2695, 2915, 3237, 3660
SspI	AATATT	2 cut(s)	358, 3468
SspMI	CTAG	8 cut(s)	453, 512, 639, 717, 1880, 2106, 2303, 2388
SstI	GAGCTC	1 cut(s)	432
StuI	AGGCCT	1 cut(s)	1652
StyI	CCWWGG	1 cut(s)	2105
SwaI	ATTTAAAT	1 cut(s)	1858
TaiI	ACGT	3 cut(s)	968, 2364, 3258
TaqI	TCGA	7 cut(s)	206, 691, 847, 1053, 2154, 2609, 2740
TaqII	GACCGA	3 cut(s)	1503, 2950, 3019
TatI	WGTACW	6 cut(s)	753, 1534, 2087, 2390, 2845, 3286
TauI	GCSGC	3 cut(s)	1670, 2918, 3239
TfiI	GAWTC	8 cut(s)	449, 1127, 1557, 1637, 1943, 2032, 3026, 3166
TseFI	GTSAC	3 cut(s)	1912, 2449, 2962
Tsp45I	GTSAC	3 cut(s)	1912, 2449, 2962
TspGWI	ACGGA	1 cut(s)	1866
TspMI	CCCGGG	1 cut(s)	2731
Vha464I	CTTAAG	1 cut(s)	1561
VneI	GTGCAC	2 cut(s)	1137, 2369
VpaK11BI	GGWCC	9 cut(s)	76, 878, 1121, 1148, 2060, 2259, 2327, 3398, 3414
XagI	CCTNNNNNAGG	2 cut(s)	395, 2466
XbaI	TCTAGA	2 cut(s)	452, 511
XceI	RCATGY	4 cut(s)	659, 1499, 1503, 2593
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2564
XmaI	CCCGGG	1 cut(s)	2731
XmaJI	CCTAGG	1 cut(s)	2105
XmiI	GTMKAC	1 cut(s)	968
XmnI	GAANNNNTTC	3 cut(s)	156, 1005, 3744
XspI	CTAG	8 cut(s)	453, 512, 639, 717, 1880, 2106, 2303, 2388
ZrmI	AGTACT	4 cut(s)	755, 1536, 2089, 2392
Zsp2I	ATGCAT	3 cut(s)	591, 730, 1501

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.