E3 ubiquitin-protein ligase PUB23-like
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g08000 |
| malus_domestica | MD02G1229800.v1.1 MD07G1083300.v1.1 |
| prunus_persica | Prupe.2G109000_v2.0.a1 |
| pyrus_communis | pycom07g06670 |
| rosa_chinensis | RchiOBHm_Chr1g0341311 |
| rosa_laevigata | RLG00000029083 |
| rosa_multiflora | Rmu_sc0004092.1_g000049 |
| rosa_roxburghii | Rroxscaffold_4G00311950 |
| rosa_rugosa | Rorug01G0157700.1 |
| rosa_samantha | Rh1AG172300 Rh1BG140300 Rh1CG160400 Rh1DG172600 |
| rosa_wichuraiana | Rw1G014370 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 803 |
| Acc36I | ACCTGC | 1 cut(s) | 803 |
| Acc65I | GGTACC | 1 cut(s) | 1176 |
| AccB1I | GGYRCC | 1 cut(s) | 1176 |
| AciI | CCGC | 1 cut(s) | 586 |
| AclWI | GGATC | 2 cut(s) | 852, 1081 |
| AcoI | YGGCCR | 2 cut(s) | 3, 147 |
| AcsI | RAATTY | 4 cut(s) | 169, 256, 1162, 1227 |
| AcuI | CTGAAG | 3 cut(s) | 566, 618, 1132 |
| AcyI | GRCGYC | 1 cut(s) | 84 |
| AfaI | GTAC | 1 cut(s) | 1178 |
| AfeI | AGCGCT | 1 cut(s) | 595 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 201, 322, 999 |
| AflIII | ACRYGT | 1 cut(s) | 97 |
| AgsI | TTSAA | 8 cut(s) | 287, 322, 419, 628, 694, 799, 809, 1201 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1114 |
| AjnI | CCWGG | 1 cut(s) | 924 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 393, 425 |
| AluBI | AGCT | 7 cut(s) | 52, 482, 538, 709, 741, 838, 1087 |
| AluI | AGCT | 7 cut(s) | 52, 482, 538, 709, 741, 838, 1087 |
| Alw21I | GWGCWC | 2 cut(s) | 54, 743 |
| Alw26I | GTCTC | 1 cut(s) | 365 |
| AlwI | GGATC | 2 cut(s) | 852, 1081 |
| Aor51HI | AGCGCT | 1 cut(s) | 595 |
| AoxI | GGCC | 4 cut(s) | 3, 147, 468, 921 |
| ApoI | RAATTY | 4 cut(s) | 169, 256, 1162, 1227 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 644, 676 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 116, 291, 1117, 1145 |
| Asp718I | GGTACC | 1 cut(s) | 1176 |
| AspLEI | GCGC | 1 cut(s) | 596 |
| AspS9I | GGNCC | 3 cut(s) | 61, 468, 922 |
| AsuC2I | CCSGG | 1 cut(s) | 146 |
| AsuHPI | GGTGA | 6 cut(s) | 377, 488, 536, 1015, 1025, 1090 |
| AsuII | TTCGAA | 1 cut(s) | 959 |
| AvaII | GGWCC | 1 cut(s) | 61 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BanI | GGYRCC | 1 cut(s) | 1176 |
| BanII | GRGCYC | 2 cut(s) | 54, 743 |
| BbsI | GAAGAC | 2 cut(s) | 303, 1110 |
| Bbv12I | GWGCWC | 2 cut(s) | 54, 743 |
| BbvCI | CCTCAGC | 1 cut(s) | 909 |
| BccI | CCATC | 3 cut(s) | 80, 515, 628 |
| BciT130I | CCWGG | 1 cut(s) | 926 |
| BciVI | GTATCC | 1 cut(s) | 1199 |
| BclI | TGATCA | 1 cut(s) | 885 |
| BcnI | CCSGG | 1 cut(s) | 146 |
| BcoDI | GTCTC | 1 cut(s) | 365 |
| BfaI | CTAG | 1 cut(s) | 710 |
| BfoI | RGCGCY | 1 cut(s) | 597 |
| BfuAI | ACCTGC | 1 cut(s) | 803 |
| BfuI | GTATCC | 1 cut(s) | 1199 |
| BglII | AGATCT | 1 cut(s) | 1143 |
| Bme1390I | CCNGG | 2 cut(s) | 146, 926 |
| Bme18I | GGWCC | 1 cut(s) | 61 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1114 |
| BmgT120I | GGNCC | 3 cut(s) | 61, 468, 922 |
| BmiI | GGNNCC | 2 cut(s) | 63, 1178 |
| BmrFI | CCNGG | 2 cut(s) | 146, 926 |
| BmsI | GCATC | 3 cut(s) | 23, 788, 960 |
| BpiI | GAAGAC | 2 cut(s) | 303, 1110 |
| Bpu10I | CCTNAGC | 1 cut(s) | 909 |
| Bpu14I | TTCGAA | 1 cut(s) | 959 |
| BpuEI | CTTGAG | 2 cut(s) | 182, 793 |
| BpuMI | CCSGG | 1 cut(s) | 146 |
| BsaBI | GATNNNNATC | 1 cut(s) | 767 |
| BsaHI | GRCGYC | 1 cut(s) | 84 |
| BsaJI | CCNNGG | 5 cut(s) | 6, 45, 226, 750, 924 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 393, 423, 1046, 1076 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 201, 322, 999 |
| Bse118I | RCCGGY | 1 cut(s) | 80 |
| Bse1I | ACTGG | 1 cut(s) | 659 |
| Bse8I | GATNNNNATC | 1 cut(s) | 767 |
| BseBI | CCWGG | 1 cut(s) | 926 |
| BseDI | CCNNGG | 5 cut(s) | 6, 45, 226, 750, 924 |
| BseGI | GGATG | 1 cut(s) | 1220 |
| BseJI | GATNNNNATC | 1 cut(s) | 767 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 201, 322, 999 |
| BseMII | CTCAG | 5 cut(s) | 237, 310, 525, 900, 1032 |
| BseNI | ACTGG | 1 cut(s) | 659 |
| BseRI | GAGGAG | 2 cut(s) | 293, 383 |
| BsgI | GTGCAG | 1 cut(s) | 837 |
| BshFI | GGCC | 4 cut(s) | 5, 149, 470, 923 |
| BshNI | GGYRCC | 1 cut(s) | 1176 |
| BsiHKAI | GWGCWC | 2 cut(s) | 54, 743 |
| BsiSI | CCGG | 2 cut(s) | 81, 146 |
| BslFI | GGGAC | 1 cut(s) | 245 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 201, 322, 999 |
| BsmAI | GTCTC | 1 cut(s) | 365 |
| BsmFI | GGGAC | 1 cut(s) | 245 |
| BsnI | GGCC | 4 cut(s) | 5, 149, 470, 923 |
| Bsp119I | TTCGAA | 1 cut(s) | 959 |
| Bsp1286I | GDGCHC | 2 cut(s) | 54, 743 |
| Bsp143I | GATC | 9 cut(s) | 303, 563, 573, 673, 857, 885, 1008, 1073, 1143 |
| Bsp19I | CCATGG | 2 cut(s) | 6, 45 |
| BspACI | CCGC | 1 cut(s) | 586 |
| BspANI | GGCC | 4 cut(s) | 5, 149, 470, 923 |
| BspCNI | CTCAG | 5 cut(s) | 238, 309, 524, 901, 1033 |
| BspHI | TCATGA | 1 cut(s) | 54 |
| BspLI | GGNNCC | 2 cut(s) | 63, 1178 |
| BspMI | ACCTGC | 1 cut(s) | 803 |
| BspPI | GGATC | 2 cut(s) | 852, 1081 |
| BspT104I | TTCGAA | 1 cut(s) | 959 |
| BspT107I | GGYRCC | 1 cut(s) | 1176 |
| BsrFI | RCCGGY | 1 cut(s) | 80 |
| BsrI | ACTGG | 1 cut(s) | 659 |
| BssAI | RCCGGY | 1 cut(s) | 80 |
| BssECI | CCNNGG | 5 cut(s) | 6, 45, 226, 750, 924 |
| BssMI | GATC | 9 cut(s) | 303, 563, 573, 673, 857, 885, 1008, 1073, 1143 |
| BssNI | GRCGYC | 1 cut(s) | 84 |
| BssT1I | CCWWGG | 4 cut(s) | 6, 45, 226, 750 |
| Bst2UI | CCWGG | 1 cut(s) | 926 |
| Bst4CI | ACNGT | 2 cut(s) | 1098, 1176 |
| BstACI | GRCGYC | 1 cut(s) | 84 |
| BstBI | TTCGAA | 1 cut(s) | 959 |
| BstC8I | GCNNGC | 4 cut(s) | 472, 604, 739, 921 |
| BstDEI | CTNAG | 6 cut(s) | 246, 296, 511, 909, 1041, 1210 |
| BstDSI | CCRYGG | 2 cut(s) | 6, 45 |
| BstF5I | GGATG | 1 cut(s) | 1220 |
| BstH2I | RGCGCY | 1 cut(s) | 597 |
| BstHHI | GCGC | 1 cut(s) | 596 |
| BstKTI | GATC | 9 cut(s) | 306, 566, 576, 676, 860, 888, 1011, 1076, 1146 |
| BstMAI | GTCTC | 1 cut(s) | 365 |
| BstMBI | GATC | 9 cut(s) | 303, 563, 573, 673, 857, 885, 1008, 1073, 1143 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 738, 809 |
| BstNI | CCWGG | 1 cut(s) | 926 |
| BstNSI | RCATGY | 2 cut(s) | 144, 977 |
| BstSCI | CCNGG | 2 cut(s) | 144, 924 |
| BstV2I | GAAGAC | 2 cut(s) | 303, 1110 |
| BstX2I | RGATCY | 2 cut(s) | 857, 1143 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 568 |
| BstYI | RGATCY | 2 cut(s) | 857, 1143 |
| BsuI | GTATCC | 1 cut(s) | 1199 |
| BsuRI | GGCC | 4 cut(s) | 5, 149, 470, 923 |
| BtgI | CCRYGG | 2 cut(s) | 6, 45 |
| BtsCI | GGATG | 1 cut(s) | 1220 |
| BtsIMutI | CAGTG | 1 cut(s) | 1094 |
| BveI | ACCTGC | 1 cut(s) | 803 |
| Cac8I | GCNNGC | 4 cut(s) | 472, 604, 739, 921 |
| CciI | TCATGA | 1 cut(s) | 54 |
| CfoI | GCGC | 1 cut(s) | 596 |
| Cfr10I | RCCGGY | 1 cut(s) | 80 |
| Cfr13I | GGNCC | 3 cut(s) | 61, 468, 922 |
| CseI | GACGC | 1 cut(s) | 73 |
| Csp6I | GTAC | 1 cut(s) | 1177 |
| CviQI | GTAC | 1 cut(s) | 1177 |
| DdeI | CTNAG | 6 cut(s) | 246, 296, 511, 909, 1041, 1210 |
| DpnI | GATC | 9 cut(s) | 305, 565, 575, 675, 859, 887, 1010, 1075, 1145 |
| DpnII | GATC | 9 cut(s) | 303, 563, 573, 673, 857, 885, 1008, 1073, 1143 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1114 |
| EaeI | YGGCCR | 2 cut(s) | 3, 147 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1114 |
| Ecl136II | GAGCTC | 2 cut(s) | 52, 741 |
| Eco130I | CCWWGG | 4 cut(s) | 6, 45, 226, 750 |
| Eco24I | GRGCYC | 2 cut(s) | 54, 743 |
| Eco47I | GGWCC | 1 cut(s) | 61 |
| Eco47III | AGCGCT | 1 cut(s) | 595 |
| Eco53kI | GAGCTC | 2 cut(s) | 52, 741 |
| Eco57I | CTGAAG | 3 cut(s) | 566, 618, 1132 |
| EcoICRI | GAGCTC | 2 cut(s) | 52, 741 |
| EcoO109I | RGGNCCY | 1 cut(s) | 61 |
| EcoRI | GAATTC | 1 cut(s) | 256 |
| EcoRII | CCWGG | 1 cut(s) | 924 |
| EcoT14I | CCWWGG | 4 cut(s) | 6, 45, 226, 750 |
| EcoT22I | ATGCAT | 1 cut(s) | 975 |
| EcoT38I | GRGCYC | 2 cut(s) | 54, 743 |
| ErhI | CCWWGG | 4 cut(s) | 6, 45, 226, 750 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 591, 623, 1193, 1225 |
| FaqI | GGGAC | 1 cut(s) | 245 |
| FauI | CCCGC | 1 cut(s) | 579 |
| FauNDI | CATATG | 1 cut(s) | 1104 |
| FbaI | TGATCA | 1 cut(s) | 885 |
| FokI | GGATG | 1 cut(s) | 1227 |
| FriOI | GRGCYC | 2 cut(s) | 54, 743 |
| FspBI | CTAG | 1 cut(s) | 710 |
| GlaI | GCGC | 1 cut(s) | 595 |
| HaeII | RGCGCY | 1 cut(s) | 597 |
| HaeIII | GGCC | 4 cut(s) | 5, 149, 470, 923 |
| HapII | CCGG | 2 cut(s) | 81, 146 |
| HgaI | GACGC | 1 cut(s) | 73 |
| HhaI | GCGC | 1 cut(s) | 596 |
| Hin1I | GRCGYC | 1 cut(s) | 84 |
| Hin6I | GCGC | 1 cut(s) | 594 |
| HinP1I | GCGC | 1 cut(s) | 594 |
| HincII | GTYRAC | 1 cut(s) | 103 |
| HindII | GTYRAC | 1 cut(s) | 103 |
| HinfI | GANTC | 5 cut(s) | 162, 233, 527, 554, 848 |
| HpaII | CCGG | 2 cut(s) | 81, 146 |
| HphI | GGTGA | 6 cut(s) | 377, 488, 536, 1015, 1025, 1090 |
| Hpy166II | GTNNAC | 1 cut(s) | 103 |
| Hpy188I | TCNGA | 6 cut(s) | 32, 247, 268, 451, 514, 718 |
| Hpy188III | TCNNGA | 8 cut(s) | 55, 109, 199, 628, 772, 845, 861, 952 |
| Hpy8I | GTNNAC | 1 cut(s) | 103 |
| Hpy99I | CGWCG | 1 cut(s) | 1126 |
| HpyAV | CCTTC | 7 cut(s) | 52, 273, 515, 617, 793, 1107, 1195 |
| HpyCH4III | ACNGT | 2 cut(s) | 1098, 1176 |
| HpyCH4IV | ACGT | 1 cut(s) | 97 |
| HpyCH4V | TGCA | 8 cut(s) | 157, 215, 818, 880, 973, 1094, 1102, 1156 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 738, 809 |
| HpyF3I | CTNAG | 6 cut(s) | 246, 296, 511, 909, 1041, 1210 |
| HpySE526I | ACGT | 1 cut(s) | 97 |
| Hsp92I | GRCGYC | 1 cut(s) | 84 |
| HspAI | GCGC | 1 cut(s) | 594 |
| KpnI | GGTACC | 1 cut(s) | 1180 |
| Ksp22I | TGATCA | 1 cut(s) | 885 |
| Kzo9I | GATC | 9 cut(s) | 303, 563, 573, 673, 857, 885, 1008, 1073, 1143 |
| LmnI | GCTCC | 3 cut(s) | 49, 706, 1092 |
| LweI | GCATC | 3 cut(s) | 23, 788, 960 |
| MaeI | CTAG | 1 cut(s) | 710 |
| MaeII | ACGT | 1 cut(s) | 97 |
| MaeIII | GTNAC | 5 cut(s) | 67, 85, 457, 524, 891 |
| MalI | GATC | 9 cut(s) | 305, 565, 575, 675, 859, 887, 1010, 1075, 1145 |
| MboI | GATC | 9 cut(s) | 303, 563, 573, 673, 857, 885, 1008, 1073, 1143 |
| MfeI | CAATTG | 1 cut(s) | 804 |
| MflI | RGATCY | 2 cut(s) | 857, 1143 |
| MhlI | GDGCHC | 2 cut(s) | 54, 743 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluCI | AATT | 7 cut(s) | 169, 256, 646, 804, 1027, 1162, 1227 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MlyI | GAGTC | 4 cut(s) | 227, 521, 548, 857 |
| MmeI | TCCRAC | 2 cut(s) | 684, 1032 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| Mph1103I | ATGCAT | 1 cut(s) | 975 |
| MroXI | GAANNNNTTC | 4 cut(s) | 116, 291, 1117, 1145 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| MseI | TTAA | 2 cut(s) | 335, 534 |
| MslI | CAYNNNNRTG | 2 cut(s) | 305, 950 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MspA1I | CMGCKG | 1 cut(s) | 586 |
| MspI | CCGG | 2 cut(s) | 81, 146 |
| MspR9I | CCNGG | 2 cut(s) | 146, 926 |
| MunI | CAATTG | 1 cut(s) | 804 |
| MvaI | CCWGG | 1 cut(s) | 926 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 738, 809 |
| NciI | CCSGG | 1 cut(s) | 146 |
| NcoI | CCATGG | 2 cut(s) | 6, 45 |
| NdeI | CATATG | 1 cut(s) | 1104 |
| NdeII | GATC | 9 cut(s) | 303, 563, 573, 673, 857, 885, 1008, 1073, 1143 |
| NlaIV | GGNNCC | 2 cut(s) | 63, 1178 |
| NmuCI | GTSAC | 2 cut(s) | 85, 524 |
| NsiI | ATGCAT | 1 cut(s) | 975 |
| NspI | RCATGY | 2 cut(s) | 144, 977 |
| NspV | TTCGAA | 1 cut(s) | 959 |
| PagI | TCATGA | 1 cut(s) | 54 |
| PaqCI | CACCTGC | 1 cut(s) | 803 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 171 |
| PdmI | GAANNNNTTC | 4 cut(s) | 116, 291, 1117, 1145 |
| PfeI | GAWTC | 1 cut(s) | 162 |
| PleI | GAGTC | 4 cut(s) | 227, 521, 548, 856 |
| PpsI | GAGTC | 4 cut(s) | 227, 521, 548, 856 |
| PpuMI | RGGWCCY | 1 cut(s) | 61 |
| Psp124BI | GAGCTC | 2 cut(s) | 54, 743 |
| Psp5II | RGGWCCY | 1 cut(s) | 61 |
| Psp6I | CCWGG | 1 cut(s) | 924 |
| PspGI | CCWGG | 1 cut(s) | 924 |
| PspN4I | GGNNCC | 2 cut(s) | 63, 1178 |
| PspPI | GGNCC | 3 cut(s) | 61, 468, 922 |
| PspPPI | RGGWCCY | 1 cut(s) | 61 |
| PsuI | RGATCY | 2 cut(s) | 857, 1143 |
| RsaI | GTAC | 1 cut(s) | 1178 |
| RsaNI | GTAC | 1 cut(s) | 1177 |
| RseI | CAYNNNNRTG | 2 cut(s) | 305, 950 |
| SacI | GAGCTC | 2 cut(s) | 54, 743 |
| SaqAI | TTAA | 2 cut(s) | 335, 534 |
| Sau3AI | GATC | 9 cut(s) | 303, 563, 573, 673, 857, 885, 1008, 1073, 1143 |
| Sau96I | GGNCC | 3 cut(s) | 61, 468, 922 |
| SchI | GAGTC | 4 cut(s) | 227, 521, 548, 857 |
| ScrFI | CCNGG | 2 cut(s) | 146, 926 |
| SduI | GDGCHC | 2 cut(s) | 54, 743 |
| SfaNI | GCATC | 3 cut(s) | 23, 788, 960 |
| SfuI | TTCGAA | 1 cut(s) | 959 |
| SgrAI | CRCCGGYG | 1 cut(s) | 80 |
| SinI | GGWCC | 1 cut(s) | 61 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 305, 950 |
| SmlI | CTYRAG | 2 cut(s) | 197, 772 |
| SmoI | CTYRAG | 2 cut(s) | 197, 772 |
| Sse9I | AATT | 7 cut(s) | 169, 256, 646, 804, 1027, 1162, 1227 |
| SsiI | CCGC | 1 cut(s) | 586 |
| SspMI | CTAG | 1 cut(s) | 710 |
| SstI | GAGCTC | 2 cut(s) | 54, 743 |
| StyD4I | CCNGG | 2 cut(s) | 144, 924 |
| StyI | CCWWGG | 4 cut(s) | 6, 45, 226, 750 |
| TaaI | ACNGT | 2 cut(s) | 1098, 1176 |
| TaiI | ACGT | 1 cut(s) | 100 |
| TaqI | TCGA | 7 cut(s) | 108, 165, 174, 236, 254, 959, 1121 |
| TasI | AATT | 7 cut(s) | 169, 256, 646, 804, 1027, 1162, 1227 |
| TfiI | GAWTC | 1 cut(s) | 162 |
| Tru1I | TTAA | 2 cut(s) | 335, 534 |
| Tru9I | TTAA | 2 cut(s) | 335, 534 |
| TscAI | CASTG | 1 cut(s) | 1101 |
| TseFI | GTSAC | 2 cut(s) | 85, 524 |
| Tsp45I | GTSAC | 2 cut(s) | 85, 524 |
| TspDTI | ATGAA | 3 cut(s) | 71, 376, 1155 |
| TspGWI | ACGGA | 1 cut(s) | 1125 |
| TspRI | CASTG | 1 cut(s) | 1101 |
| VpaK11BI | GGWCC | 1 cut(s) | 61 |
| XapI | RAATTY | 4 cut(s) | 169, 256, 1162, 1227 |
| XceI | RCATGY | 2 cut(s) | 144, 977 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 358, 565 |
| XmnI | GAANNNNTTC | 4 cut(s) | 116, 291, 1117, 1145 |
| XspI | CTAG | 1 cut(s) | 710 |
| Zsp2I | ATGCAT | 1 cut(s) | 975 |