Peptidase family C50
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g17590 FvH4_7g11070 |
| rosa_chinensis | RchiOBHm_Chr4g0428231 RchiOBHm_Chr4g0428251 |
| rosa_samantha | Rh4CG301800 |
| rosa_wichuraiana | Rw0G010790 Rw0G010810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 101 |
| AciI | CCGC | 2 cut(s) | 6, 22 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcuI | CTGAAG | 2 cut(s) | 84, 539 |
| AdeI | CACNNNGTG | 1 cut(s) | 358 |
| AfeI | AGCGCT | 1 cut(s) | 76 |
| AflIII | ACRYGT | 1 cut(s) | 111 |
| AgsI | TTSAA | 3 cut(s) | 185, 401, 614 |
| AluBI | AGCT | 3 cut(s) | 68, 446, 630 |
| AluI | AGCT | 3 cut(s) | 68, 446, 630 |
| Aor51HI | AGCGCT | 1 cut(s) | 76 |
| AoxI | GGCC | 2 cut(s) | 3, 433 |
| AspLEI | GCGC | 2 cut(s) | 77, 103 |
| AspS9I | GGNCC | 2 cut(s) | 329, 434 |
| AvaII | GGWCC | 1 cut(s) | 329 |
| BccI | CCATC | 2 cut(s) | 188, 553 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 453, 487 |
| BfaI | CTAG | 1 cut(s) | 78 |
| BfoI | RGCGCY | 1 cut(s) | 78 |
| BisI | GCNGC | 1 cut(s) | 6 |
| BlsI | GCNGC | 1 cut(s) | 7 |
| Bme18I | GGWCC | 1 cut(s) | 329 |
| BmgT120I | GGNCC | 2 cut(s) | 329, 434 |
| BmiI | GGNNCC | 2 cut(s) | 40, 331 |
| BmsI | GCATC | 1 cut(s) | 211 |
| BpmI | CTGGAG | 1 cut(s) | 591 |
| BpuEI | CTTGAG | 1 cut(s) | 332 |
| BsaJI | CCNNGG | 2 cut(s) | 278, 477 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 559, 589 |
| Bse1I | ACTGG | 2 cut(s) | 48, 608 |
| BseDI | CCNNGG | 2 cut(s) | 278, 477 |
| BseGI | GGATG | 1 cut(s) | 487 |
| BseMII | CTCAG | 1 cut(s) | 510 |
| BseNI | ACTGG | 2 cut(s) | 48, 608 |
| BseRI | GAGGAG | 3 cut(s) | 31, 339, 580 |
| Bsh1236I | CGCG | 1 cut(s) | 101 |
| BshFI | GGCC | 2 cut(s) | 5, 435 |
| BslFI | GGGAC | 2 cut(s) | 281, 315 |
| BsmFI | GGGAC | 2 cut(s) | 281, 315 |
| BsmI | GAATGC | 1 cut(s) | 620 |
| BsnI | GGCC | 2 cut(s) | 5, 435 |
| Bsp143I | GATC | 2 cut(s) | 132, 464 |
| BspACI | CCGC | 2 cut(s) | 6, 22 |
| BspANI | GGCC | 2 cut(s) | 5, 435 |
| BspCNI | CTCAG | 1 cut(s) | 509 |
| BspFNI | CGCG | 1 cut(s) | 101 |
| BspHI | TCATGA | 1 cut(s) | 624 |
| BspLI | GGNNCC | 2 cut(s) | 40, 331 |
| BsrI | ACTGG | 2 cut(s) | 48, 608 |
| BssECI | CCNNGG | 2 cut(s) | 278, 477 |
| BssMI | GATC | 2 cut(s) | 132, 464 |
| BssT1I | CCWWGG | 1 cut(s) | 278 |
| Bst4CI | ACNGT | 4 cut(s) | 151, 256, 339, 375 |
| BstDEI | CTNAG | 2 cut(s) | 496, 684 |
| BstF5I | GGATG | 1 cut(s) | 487 |
| BstFNI | CGCG | 1 cut(s) | 101 |
| BstH2I | RGCGCY | 1 cut(s) | 78 |
| BstHHI | GCGC | 2 cut(s) | 77, 103 |
| BstKTI | GATC | 2 cut(s) | 135, 467 |
| BstMBI | GATC | 2 cut(s) | 132, 464 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 74 |
| BstNSI | RCATGY | 2 cut(s) | 115, 142 |
| BstUI | CGCG | 1 cut(s) | 101 |
| BsuRI | GGCC | 2 cut(s) | 5, 435 |
| BtsCI | GGATG | 1 cut(s) | 487 |
| BtsIMutI | CAGTG | 4 cut(s) | 55, 147, 261, 380 |
| CciI | TCATGA | 1 cut(s) | 624 |
| CfoI | GCGC | 2 cut(s) | 77, 103 |
| Cfr13I | GGNCC | 2 cut(s) | 329, 434 |
| CseI | GACGC | 1 cut(s) | 107 |
| CviAII | CATG | 5 cut(s) | 112, 139, 573, 590, 625 |
| CviJI | RGCY | 7 cut(s) | 5, 39, 68, 416, 435, 446, 630 |
| CviKI_1 | RGCY | 7 cut(s) | 5, 39, 68, 416, 435, 446, 630 |
| DdeI | CTNAG | 2 cut(s) | 496, 684 |
| DpnI | GATC | 2 cut(s) | 134, 466 |
| DpnII | GATC | 2 cut(s) | 132, 464 |
| DraIII | CACNNNGTG | 1 cut(s) | 358 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eco130I | CCWWGG | 1 cut(s) | 278 |
| Eco47I | GGWCC | 1 cut(s) | 329 |
| Eco47III | AGCGCT | 1 cut(s) | 76 |
| Eco57I | CTGAAG | 2 cut(s) | 84, 539 |
| EcoO109I | RGGNCCY | 1 cut(s) | 329 |
| EcoT14I | CCWWGG | 1 cut(s) | 278 |
| EcoT22I | ATGCAT | 1 cut(s) | 226 |
| ErhI | CCWWGG | 1 cut(s) | 278 |
| FaeI | CATG | 5 cut(s) | 115, 142, 576, 593, 628 |
| FaqI | GGGAC | 2 cut(s) | 281, 315 |
| FatI | CATG | 5 cut(s) | 111, 138, 572, 589, 624 |
| Fnu4HI | GCNGC | 1 cut(s) | 6 |
| FokI | GGATG | 1 cut(s) | 494 |
| Fsp4HI | GCNGC | 1 cut(s) | 6 |
| FspBI | CTAG | 1 cut(s) | 78 |
| GlaI | GCGC | 2 cut(s) | 76, 102 |
| GluI | GCNGC | 1 cut(s) | 6 |
| GsuI | CTGGAG | 1 cut(s) | 591 |
| HaeII | RGCGCY | 1 cut(s) | 78 |
| HaeIII | GGCC | 2 cut(s) | 5, 435 |
| HgaI | GACGC | 1 cut(s) | 107 |
| HhaI | GCGC | 2 cut(s) | 77, 103 |
| Hin1II | CATG | 5 cut(s) | 115, 142, 576, 593, 628 |
| Hin6I | GCGC | 2 cut(s) | 75, 101 |
| HinP1I | GCGC | 2 cut(s) | 75, 101 |
| HinfI | GANTC | 2 cut(s) | 568, 586 |
| Hpy166II | GTNNAC | 2 cut(s) | 252, 461 |
| Hpy188I | TCNGA | 7 cut(s) | 178, 387, 499, 543, 551, 558, 637 |
| Hpy188III | TCNNGA | 3 cut(s) | 530, 614, 625 |
| Hpy8I | GTNNAC | 2 cut(s) | 252, 461 |
| HpyAV | CCTTC | 2 cut(s) | 573, 612 |
| HpyCH4III | ACNGT | 4 cut(s) | 151, 256, 339, 375 |
| HpyCH4V | TGCA | 5 cut(s) | 138, 200, 224, 474, 593 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 74 |
| HpyF3I | CTNAG | 2 cut(s) | 496, 684 |
| Hsp92II | CATG | 5 cut(s) | 115, 142, 576, 593, 628 |
| HspAI | GCGC | 2 cut(s) | 75, 101 |
| Kzo9I | GATC | 2 cut(s) | 132, 464 |
| LmnI | GCTCC | 1 cut(s) | 44 |
| LpnPI | CCDG | 5 cut(s) | 54, 61, 68, 417, 621 |
| LweI | GCATC | 1 cut(s) | 211 |
| MaeI | CTAG | 1 cut(s) | 78 |
| MaeIII | GTNAC | 2 cut(s) | 50, 408 |
| MalI | GATC | 2 cut(s) | 134, 466 |
| MboI | GATC | 2 cut(s) | 132, 464 |
| MlyI | GAGTC | 2 cut(s) | 577, 595 |
| MmeI | TCCRAC | 1 cut(s) | 574 |
| MnlI | CCTC | 8 cut(s) | 52, 317, 320, 356, 447, 472, 558, 610 |
| Mph1103I | ATGCAT | 1 cut(s) | 226 |
| MseI | TTAA | 3 cut(s) | 420, 519, 656 |
| Mva1269I | GAATGC | 1 cut(s) | 620 |
| MvnI | CGCG | 1 cut(s) | 101 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 74 |
| NdeII | GATC | 2 cut(s) | 132, 464 |
| NlaIII | CATG | 5 cut(s) | 115, 142, 576, 593, 628 |
| NlaIV | GGNNCC | 2 cut(s) | 40, 331 |
| NmuCI | GTSAC | 2 cut(s) | 50, 408 |
| NsiI | ATGCAT | 1 cut(s) | 226 |
| NspI | RCATGY | 2 cut(s) | 115, 142 |
| PagI | TCATGA | 1 cut(s) | 624 |
| PciI | ACATGT | 1 cut(s) | 111 |
| PctI | GAATGC | 1 cut(s) | 620 |
| PkrI | GCNGC | 1 cut(s) | 7 |
| PleI | GAGTC | 2 cut(s) | 576, 594 |
| PpsI | GAGTC | 2 cut(s) | 576, 594 |
| PpuMI | RGGWCCY | 1 cut(s) | 329 |
| PscI | ACATGT | 1 cut(s) | 111 |
| Psp5II | RGGWCCY | 1 cut(s) | 329 |
| PspN4I | GGNNCC | 2 cut(s) | 40, 331 |
| PspPI | GGNCC | 2 cut(s) | 329, 434 |
| PspPPI | RGGWCCY | 1 cut(s) | 329 |
| SaqAI | TTAA | 3 cut(s) | 420, 519, 656 |
| SatI | GCNGC | 1 cut(s) | 6 |
| Sau3AI | GATC | 2 cut(s) | 132, 464 |
| Sau96I | GGNCC | 2 cut(s) | 329, 434 |
| SchI | GAGTC | 2 cut(s) | 577, 595 |
| SetI | ASST | 9 cut(s) | 32, 70, 87, 109, 331, 385, 448, 584, 632 |
| SfaNI | GCATC | 1 cut(s) | 211 |
| SinI | GGWCC | 1 cut(s) | 329 |
| SmlI | CTYRAG | 1 cut(s) | 347 |
| SmoI | CTYRAG | 1 cut(s) | 347 |
| SsiI | CCGC | 2 cut(s) | 6, 22 |
| SspMI | CTAG | 1 cut(s) | 78 |
| StyI | CCWWGG | 1 cut(s) | 278 |
| TaaI | ACNGT | 4 cut(s) | 151, 256, 339, 375 |
| TaqI | TCGA | 1 cut(s) | 662 |
| TauI | GCSGC | 1 cut(s) | 8 |
| Tru1I | TTAA | 3 cut(s) | 420, 519, 656 |
| Tru9I | TTAA | 3 cut(s) | 420, 519, 656 |
| TscAI | CASTG | 4 cut(s) | 55, 154, 261, 380 |
| TseFI | GTSAC | 2 cut(s) | 50, 408 |
| Tsp45I | GTSAC | 2 cut(s) | 50, 408 |
| TspDTI | ATGAA | 1 cut(s) | 613 |
| TspRI | CASTG | 4 cut(s) | 55, 154, 261, 380 |
| VpaK11BI | GGWCC | 1 cut(s) | 329 |
| XceI | RCATGY | 2 cut(s) | 115, 142 |
| XspI | CTAG | 1 cut(s) | 78 |
| Zsp2I | ATGCAT | 1 cut(s) | 226 |