separase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g17590 FvH4_7g11070 |
| rosa_chinensis | RchiOBHm_Chr4g0428231 RchiOBHm_Chr4g0428251 |
| rosa_samantha | Rh4CG301800 |
| rosa_wichuraiana | Rw0G010790 Rw0G010810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 122 |
| AclI | AACGTT | 1 cut(s) | 371 |
| AclWI | GGATC | 1 cut(s) | 232 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 31, 37 |
| AgsI | TTSAA | 2 cut(s) | 361, 427 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 356, 388 |
| AluBI | AGCT | 4 cut(s) | 261, 292, 304, 385 |
| AluI | AGCT | 4 cut(s) | 261, 292, 304, 385 |
| AlwI | GGATC | 1 cut(s) | 232 |
| AoxI | GGCC | 2 cut(s) | 22, 420 |
| ApeKI | GCWGC | 1 cut(s) | 44 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 371 |
| AspS9I | GGNCC | 1 cut(s) | 420 |
| AsuC2I | CCSGG | 2 cut(s) | 32, 150 |
| BbvI | GCAGC | 1 cut(s) | 56 |
| BccI | CCATC | 1 cut(s) | 60 |
| BceAI | ACGGC | 1 cut(s) | 9 |
| BcnI | CCSGG | 2 cut(s) | 32, 150 |
| BfaI | CTAG | 1 cut(s) | 14 |
| BfmI | CTRYAG | 1 cut(s) | 348 |
| BisI | GCNGC | 1 cut(s) | 45 |
| BlsI | GCNGC | 1 cut(s) | 46 |
| Bme1390I | CCNGG | 2 cut(s) | 32, 150 |
| BmgT120I | GGNCC | 1 cut(s) | 420 |
| BmiI | GGNNCC | 2 cut(s) | 82, 147 |
| BmrFI | CCNGG | 2 cut(s) | 32, 150 |
| BmrI | ACTGGG | 1 cut(s) | 96 |
| BmsI | GCATC | 1 cut(s) | 343 |
| BmuI | ACTGGG | 1 cut(s) | 96 |
| BpmI | CTGGAG | 2 cut(s) | 326, 376 |
| BpuMI | CCSGG | 2 cut(s) | 32, 150 |
| BsaAI | YACGTR | 1 cut(s) | 296 |
| BsaJI | CCNNGG | 1 cut(s) | 416 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 356, 386 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 31, 37 |
| Bse1I | ACTGG | 2 cut(s) | 91, 393 |
| BseDI | CCNNGG | 1 cut(s) | 416 |
| BseGI | GGATG | 1 cut(s) | 40 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 31, 37 |
| BseNI | ACTGG | 2 cut(s) | 91, 393 |
| BseRI | GAGGAG | 2 cut(s) | 53, 168 |
| BseXI | GCAGC | 1 cut(s) | 56 |
| BshFI | GGCC | 2 cut(s) | 24, 422 |
| BsiSI | CCGG | 2 cut(s) | 31, 149 |
| BslFI | GGGAC | 1 cut(s) | 355 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 31, 37 |
| BsmFI | GGGAC | 1 cut(s) | 355 |
| BsnI | GGCC | 2 cut(s) | 24, 422 |
| Bsp143I | GATC | 2 cut(s) | 175, 224 |
| Bsp19I | CCATGG | 1 cut(s) | 416 |
| BspANI | GGCC | 2 cut(s) | 24, 422 |
| BspLI | GGNNCC | 2 cut(s) | 82, 147 |
| BspPI | GGATC | 1 cut(s) | 232 |
| BsrI | ACTGG | 2 cut(s) | 91, 393 |
| BssECI | CCNNGG | 1 cut(s) | 416 |
| BssMI | GATC | 2 cut(s) | 175, 224 |
| BssT1I | CCWWGG | 1 cut(s) | 416 |
| Bst4CI | ACNGT | 1 cut(s) | 214 |
| BstBAI | YACGTR | 1 cut(s) | 296 |
| BstDSI | CCRYGG | 1 cut(s) | 416 |
| BstF5I | GGATG | 1 cut(s) | 40 |
| BstKTI | GATC | 2 cut(s) | 178, 227 |
| BstMBI | GATC | 2 cut(s) | 175, 224 |
| BstSCI | CCNGG | 2 cut(s) | 30, 148 |
| BstSFI | CTRYAG | 1 cut(s) | 348 |
| BstSNI | TACGTA | 1 cut(s) | 296 |
| BstV1I | GCAGC | 1 cut(s) | 56 |
| BstX2I | RGATCY | 1 cut(s) | 224 |
| BstYI | RGATCY | 1 cut(s) | 224 |
| BsuRI | GGCC | 2 cut(s) | 24, 422 |
| BtgI | CCRYGG | 1 cut(s) | 416 |
| BtsCI | GGATG | 1 cut(s) | 40 |
| BtsIMutI | CAGTG | 2 cut(s) | 84, 400 |
| Cfr13I | GGNCC | 1 cut(s) | 420 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 73, 108 |
| CviAII | CATG | 1 cut(s) | 417 |
| CviJI | RGCY | 7 cut(s) | 24, 133, 261, 292, 304, 385, 422 |
| CviKI_1 | RGCY | 7 cut(s) | 24, 133, 261, 292, 304, 385, 422 |
| DpnI | GATC | 2 cut(s) | 177, 226 |
| DpnII | GATC | 2 cut(s) | 175, 224 |
| Eco105I | TACGTA | 1 cut(s) | 296 |
| Eco130I | CCWWGG | 1 cut(s) | 416 |
| EcoT14I | CCWWGG | 1 cut(s) | 416 |
| ErhI | CCWWGG | 1 cut(s) | 416 |
| FaeI | CATG | 1 cut(s) | 420 |
| FaiI | YATR | 7 cut(s) | 101, 122, 167, 237, 401, 418, 448 |
| FaqI | GGGAC | 1 cut(s) | 355 |
| FatI | CATG | 1 cut(s) | 416 |
| Fnu4HI | GCNGC | 1 cut(s) | 45 |
| FokI | GGATG | 1 cut(s) | 47 |
| Fsp4HI | GCNGC | 1 cut(s) | 45 |
| FspBI | CTAG | 1 cut(s) | 14 |
| GluI | GCNGC | 1 cut(s) | 45 |
| GsuI | CTGGAG | 2 cut(s) | 326, 376 |
| HaeIII | GGCC | 2 cut(s) | 24, 422 |
| HapII | CCGG | 2 cut(s) | 31, 149 |
| Hin1II | CATG | 1 cut(s) | 420 |
| HincII | GTYRAC | 2 cut(s) | 160, 411 |
| HindII | GTYRAC | 2 cut(s) | 160, 411 |
| HinfI | GANTC | 1 cut(s) | 412 |
| HpaI | GTTAAC | 1 cut(s) | 160 |
| HpaII | CCGG | 2 cut(s) | 31, 149 |
| Hpy166II | GTNNAC | 2 cut(s) | 160, 411 |
| Hpy188I | TCNGA | 2 cut(s) | 145, 327 |
| Hpy188III | TCNNGA | 1 cut(s) | 107 |
| Hpy8I | GTNNAC | 2 cut(s) | 160, 411 |
| Hpy99I | CGWCG | 1 cut(s) | 183 |
| HpyAV | CCTTC | 1 cut(s) | 355 |
| HpyCH4III | ACNGT | 1 cut(s) | 214 |
| HpyCH4IV | ACGT | 2 cut(s) | 295, 371 |
| HpyCH4V | TGCA | 2 cut(s) | 4, 76 |
| HpySE526I | ACGT | 2 cut(s) | 295, 371 |
| Hsp92II | CATG | 1 cut(s) | 420 |
| KspAI | GTTAAC | 1 cut(s) | 160 |
| Kzo9I | GATC | 2 cut(s) | 175, 224 |
| LpnPI | CCDG | 7 cut(s) | 44, 72, 120, 162, 290, 406, 422 |
| Lsp1109I | GCAGC | 1 cut(s) | 56 |
| LweI | GCATC | 1 cut(s) | 343 |
| MaeI | CTAG | 1 cut(s) | 14 |
| MaeII | ACGT | 2 cut(s) | 295, 371 |
| MaeIII | GTNAC | 2 cut(s) | 26, 378 |
| MalI | GATC | 2 cut(s) | 177, 226 |
| MboI | GATC | 2 cut(s) | 175, 224 |
| MboII | GAAGA | 3 cut(s) | 211, 219, 322 |
| MflI | RGATCY | 1 cut(s) | 224 |
| MluCI | AATT | 3 cut(s) | 102, 191, 203 |
| MlyI | GAGTC | 1 cut(s) | 406 |
| MmeI | TCCRAC | 1 cut(s) | 123 |
| MnlI | CCTC | 5 cut(s) | 31, 34, 121, 146, 344 |
| MroXI | GAANNNNTTC | 1 cut(s) | 371 |
| MseI | TTAA | 1 cut(s) | 159 |
| MspI | CCGG | 2 cut(s) | 31, 149 |
| MspR9I | CCNGG | 2 cut(s) | 32, 150 |
| NciI | CCSGG | 2 cut(s) | 32, 150 |
| NcoI | CCATGG | 1 cut(s) | 416 |
| NdeII | GATC | 2 cut(s) | 175, 224 |
| NlaIII | CATG | 1 cut(s) | 420 |
| NlaIV | GGNNCC | 2 cut(s) | 82, 147 |
| NmuCI | GTSAC | 2 cut(s) | 26, 378 |
| PdmI | GAANNNNTTC | 1 cut(s) | 371 |
| PkrI | GCNGC | 1 cut(s) | 46 |
| PleI | GAGTC | 1 cut(s) | 406 |
| PpsI | GAGTC | 1 cut(s) | 406 |
| Ppu21I | YACGTR | 1 cut(s) | 296 |
| PsiI | TTATAA | 1 cut(s) | 122 |
| Psp1406I | AACGTT | 1 cut(s) | 371 |
| PspN4I | GGNNCC | 2 cut(s) | 82, 147 |
| PspPI | GGNCC | 1 cut(s) | 420 |
| PsuI | RGATCY | 1 cut(s) | 224 |
| SaqAI | TTAA | 1 cut(s) | 159 |
| SatI | GCNGC | 1 cut(s) | 45 |
| Sau3AI | GATC | 2 cut(s) | 175, 224 |
| Sau96I | GGNCC | 1 cut(s) | 420 |
| SchI | GAGTC | 1 cut(s) | 406 |
| ScrFI | CCNGG | 2 cut(s) | 32, 150 |
| SetI | ASST | 8 cut(s) | 82, 165, 263, 294, 298, 306, 374, 387 |
| SfaNI | GCATC | 1 cut(s) | 343 |
| SfcI | CTRYAG | 1 cut(s) | 348 |
| SnaBI | TACGTA | 1 cut(s) | 296 |
| Sse9I | AATT | 3 cut(s) | 102, 191, 203 |
| SspMI | CTAG | 1 cut(s) | 14 |
| StyD4I | CCNGG | 2 cut(s) | 30, 148 |
| StyI | CCWWGG | 1 cut(s) | 416 |
| TaaI | ACNGT | 1 cut(s) | 214 |
| TaiI | ACGT | 2 cut(s) | 298, 374 |
| TaqI | TCGA | 1 cut(s) | 64 |
| TasI | AATT | 3 cut(s) | 102, 191, 203 |
| Tru1I | TTAA | 1 cut(s) | 159 |
| Tru9I | TTAA | 1 cut(s) | 159 |
| TscAI | CASTG | 2 cut(s) | 91, 400 |
| TseFI | GTSAC | 2 cut(s) | 26, 378 |
| TseI | GCWGC | 1 cut(s) | 44 |
| Tsp45I | GTSAC | 2 cut(s) | 26, 378 |
| TspDTI | ATGAA | 1 cut(s) | 416 |
| TspRI | CASTG | 2 cut(s) | 91, 400 |
| XmnI | GAANNNNTTC | 1 cut(s) | 371 |
| XspI | CTAG | 1 cut(s) | 14 |