Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0013057

Physical Location & Seq

Genomic Coordinates Forward (+)

12159788 .. 12165535

Gene Structure 5748 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g13590.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1815 bp

ATGTGGAAGGTGTCGCGATTCGCGGCGTCGCGGCTGAGCCAATCGACGAGGATGTTGTCGACGGCGATTCCCGGGCCTTGTATTGTTCACAAGCGCGGCGCTGATATTCTCCACGATCCTTGGTTCAATAAGGATACTGGATTTCCTCTCACTGAAAGAGATCGATTAGGACTTCGAGGTCTACTCCCACCGCGTGTCATATCTTTCGAGCAGCAATATGCTCGTTTCATGGAGTCGTATCGGTCTCTGGAGAAAAATACTGCGGGACAACCAGAAGGCGTCATCGCGTTGGCAAAGTGGAGGATTTTGAATAGACTGCATGACAGGAATGAGACTTTATACTATCGAGTTCTTATAGATAACATAAAGGACTTTGCTCCTATCATATACACTCCTACGGTAGGATTGGTGTGCCAAAATTATTCAGGGTTGTTTAGACGCCCGCGCGGAATGTATTTCAGTGCAAAGGACAAAGGGGAGATGATGTCTATGATCTACAATTGGCCTGCTAATCAGGTAGAAATGATAGTCATCACAGATGGCAGTCGTATTCTCGGCCTAGGTGATCTTGGAGTTCAGGGAATTGGAATACCAATAGGAAAACTTGATATGTATGTTGCTGCAGCTGGTATTAATCCACAGAGAATACTGCCAGTTATGCTTGATGTTGGTACTAACAATCAAAACCTACTTGATGACCGTCTTTATTTAGGACTTCGACAACCTAGGTTGGAAGGAGAAGAGTACATATCAATTATTGATGAGCTCATGGAAGCCATTCATACACGTTGGCCCAAGGCCATTGTGCAGTTTGAGGATTTTCAAATGAAGTGGGCATTTGAAACGCTGCAACGTTACCGTAAAAAGTTTTGCACATTCAATGATGATATACAGGGAACTGCTGGTGTTGCACTTGCAGGACTACTAGGAACTGTAAGAGCCCAAGGTCGACCCTTGTCAGACTTTGTGAACCAAAAGATAGTTGTTGTGGGAGCCGGAAGTGCCGGACTCGGTGTTCTTAGCATGGCTGTACAGGCTGTTTCAAGAATGGCAGGGACCAGTGGTGCGGCTGCCAAAAATCCATTTTTTCTGCTTGATAAAGATGGTCTAGTCACAAAAGAGAGGAAATATATTGATCCTATGGCTGCACCCTTTGCTAGGGATCCATCAGAGACTGAAGGGCTTAGGGAGGGAGCTAGTCTACTTGAAGTGGTTAAGAAGATCAAGCCTCATGCACTTCTTGGTTTGTCAGGAGTCGGTGGTGTCTTCAATGAGGAGGTGCTTAAAGCAATGCGAGAATCTGAGTCCGTCAAACCAGCCATCTTTGCTATGTCGAATCCAACCAAGAATGCTGAATGCACTGCTGAAGATGCCTTTAAGCATGCGGGTGAAAACATAGTCTTTGGAAGTGGAAGTCCCTTTGAGAATGTTGATCTAGGCAATGGAAAAGTCGGCCATGTTAATCAAGCAAATAACATGTACCTGTTCCCAGGGATTGGTTTAGGTGCACTTCTTTCAGGTGCTCGTTTGATATCGGATGGCATGTTGCAAGCAGCATCTGAATGCCTTGCTACATATATGACAGATGAAGACATCCGAAAGGGCATCTTATATCCCTGTATTGATAGTATTAGAGATATTACAGCAGAGGTTGGAGCTGCTGTTGTGCGTGCGGCTGTTGCAGAAGACCTGGCAGAAGGACATGGTGAAGTGGGTCCCAGAGAGCTGTCGCACATGTCAAAAGAGGAGATAGTGGACTATATTACCCGCAGTATGTGGTTCCCTGTTTACAGCCCTCTTGTTCATGAAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004470 GO:0004471 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0006082 GO:0006090 GO:0006108 GO:0008144 GO:0008150 GO:0008152 GO:0008270 GO:0009507 GO:0009536 GO:0009987 GO:0016491 GO:0016614 GO:0016615 GO:0016616 GO:0017076 GO:0019752 GO:0030554 GO:0031974 GO:0032553 GO:0032555 GO:0032559 GO:0032787 GO:0035639 GO:0036094 GO:0042802 GO:0042803 GO:0043167 GO:0043168 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043436 GO:0043648 GO:0044237 GO:0044281 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046872 GO:0046914 GO:0046983 GO:0050897 GO:0055114 GO:0070013 GO:0071704 GO:0097159 GO:0097367 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00620 ko00710 ko01100 ko01120 ko01200 map00620 map00710 map01100 map01120 map01200

Pfam Domains

Protein Families

Malic_M malic

Protein Analysis

605

Amino Acids

66.55

Weight (kDa)

6.41

Isoelectric Point (pI)

32.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
malic	PF00390	107 - 287	2.8e-75	Malic enzyme, N-terminal domain
Malic_M	PF03949	297 - 560	2.2e-89	Malic enzyme, NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0013057)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G00570
fragaria_vesca	FvH4_7g13590
malus_domestica	MD01G1052400.v1.1 MD07G1129000.v1.1
prunus_persica	Prupe.2G160000_v2.0.a1 Prupe.2G160000_v2.0.a1 Prupe.2G160000_v2.0.a1
pyrus_communis	pycom01g07810 pycom07g12470
rosa_chinensis	RchiOBHm_Chr1g0353381
rosa_laevigata	RLG00000028273
rosa_multiflora	Rmu_sc0001207.1_g000013
rosa_roxburghii	Rroxscaffold_4G00301880
rosa_rugosa	Rorug01G0235600
rosa_samantha	Rh1AG247800 Rh1BG217600 Rh1CG231500
rosa_wichuraiana	Rw1G021590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	177
AccB7I	CCANNNNNTGG	1 cut(s)	1496
AccI	GTMKAC	4 cut(s)	59, 181, 949, 1201
AccII	CGCG	8 cut(s)	16, 23, 31, 96, 193, 287, 445, 447
AclI	AACGTT	1 cut(s)	853
AclWI	GGATC	4 cut(s)	110, 1130, 1157, 1170
AcoI	YGGCCR	1 cut(s)	1453
AcuI	CTGAAG	2 cut(s)	1197, 1386
AcyI	GRCGYC	3 cut(s)	26, 279, 439
AdeI	CACNNNGTG	1 cut(s)	194
AfaI	GTAC	4 cut(s)	673, 746, 1032, 1481
AfiI	CCNNNNNNNGG	3 cut(s)	401, 1158, 1496
AflIII	ACRYGT	3 cut(s)	785, 1476, 1734
AgsI	TTSAA	8 cut(s)	127, 310, 824, 842, 880, 1044, 1208, 1270
AjnI	CCWGG	2 cut(s)	1489, 1689
AloI	GAACNNNNNNTCC	2 cut(s)	999, 1031
AluBI	AGCT	5 cut(s)	626, 766, 1196, 1658, 1726
AluI	AGCT	5 cut(s)	626, 766, 1196, 1658, 1726
Alw21I	GWGCWC	3 cut(s)	768, 1510, 1525
Alw26I	GTCTC	3 cut(s)	249, 326, 1166
Alw44I	GTGCAC	1 cut(s)	1506
AlwI	GGATC	4 cut(s)	110, 1130, 1157, 1170
AlwNI	CAGNNNCTG	2 cut(s)	1175, 1559
Ama87I	CYCGRG	1 cut(s)	71
AoxI	GGCC	6 cut(s)	74, 503, 556, 791, 798, 1453
ApaLI	GTGCAC	1 cut(s)	1506
ApeKI	GCWGC	8 cut(s)	211, 620, 623, 847, 1070, 1145, 1553, 1658
AseI	ATTAAT	1 cut(s)	633
Asp700I	GAANNNNTTC	1 cut(s)	777
AspA2I	CCTAGG	2 cut(s)	559, 725
AspLEI	GCGC	3 cut(s)	96, 101, 447
AspS9I	GGNCC	4 cut(s)	74, 792, 1056, 1715
AsuC2I	CCSGG	2 cut(s)	72, 73
AsuHPI	GGTGA	3 cut(s)	575, 1400, 1718
AvaI	CYCGRG	1 cut(s)	71
AvaII	GGWCC	2 cut(s)	1056, 1715
AvrII	CCTAGG	2 cut(s)	559, 725
BaeGI	GKGCMC	1 cut(s)	1510
BamHI	GGATCC	1 cut(s)	1162
BanII	GRGCYC	2 cut(s)	768, 943
BbsI	GAAGAC	3 cut(s)	1258, 1596, 1692
Bbv12I	GWGCWC	3 cut(s)	768, 1510, 1525
BbvI	GCAGC	8 cut(s)	223, 607, 635, 834, 1057, 1132, 1565, 1645
BccI	CCATC	5 cut(s)	533, 1097, 1174, 1328, 1532
BceAI	ACGGC	1 cut(s)	78
BcgI	CGANNNNNNTGC	2 cut(s)	203, 237
BciT130I	CCWGG	2 cut(s)	1491, 1691
BciVI	GTATCC	1 cut(s)	127
BcnI	CCSGG	2 cut(s)	72, 73
BcoDI	GTCTC	3 cut(s)	249, 326, 1166
BfaI	CTAG	7 cut(s)	560, 726, 926, 1109, 1158, 1197, 1436
BfmI	CTRYAG	1 cut(s)	621
BfoI	RGCGCY	1 cut(s)	102
BfuI	GTATCC	1 cut(s)	127
BlnI	CCTAGG	2 cut(s)	559, 725
BlpI	GCTNAGC	1 cut(s)	35
Bme1390I	CCNGG	4 cut(s)	72, 73, 1491, 1691
Bme18I	GGWCC	2 cut(s)	1056, 1715
BmeT110I	CYCGRG	1 cut(s)	71
BmgT120I	GGNCC	4 cut(s)	74, 792, 1056, 1715
BmiI	GGNNCC	6 cut(s)	994, 1057, 1164, 1716, 1717, 1781
BmrFI	CCNGG	4 cut(s)	72, 73, 1491, 1691
BmsI	GCATC	3 cut(s)	1360, 1565, 1614
BoxI	GACNNNNGTC	1 cut(s)	955
BpiI	GAAGAC	3 cut(s)	1258, 1596, 1692
BplI	GAGNNNNNCTC	2 cut(s)	168, 200
BpmI	CTGGAG	1 cut(s)	269
Bpu10I	CCTNAGC	1 cut(s)	1184
Bpu1102I	GCTNAGC	1 cut(s)	35
BpuMI	CCSGG	2 cut(s)	72, 73
Bsa29I	ATCGAT	1 cut(s)	163
BsaBI	GATNNNNATC	1 cut(s)	530
BsaHI	GRCGYC	3 cut(s)	26, 279, 439
BsaI	GGTCTC	1 cut(s)	249
BsaJI	CCNNGG	8 cut(s)	71, 119, 559, 725, 795, 943, 1489, 1490
BsaXI	ACNNNNNCTCC	4 cut(s)	470, 500, 1647, 1677
Bsc4I	CCNNNNNNNGG	3 cut(s)	401, 1158, 1496
Bse1I	ACTGG	3 cut(s)	142, 653, 1059
Bse3DI	GCAATG	2 cut(s)	1296, 1447
Bse8I	GATNNNNATC	1 cut(s)	530
BseBI	CCWGG	2 cut(s)	1491, 1691
BseCI	ATCGAT	1 cut(s)	163
BseDI	CCNNGG	8 cut(s)	71, 119, 559, 725, 795, 943, 1489, 1490
BseGI	GGATG	3 cut(s)	57, 1543, 1593
BseJI	GATNNNNATC	1 cut(s)	530
BseLI	CCNNNNNNNGG	3 cut(s)	401, 1158, 1496
BseMI	GCAATG	2 cut(s)	1296, 1447
BseMII	CTCAG	2 cut(s)	26, 1293
BseNI	ACTGG	3 cut(s)	142, 653, 1059
BseRI	GAGGAG	2 cut(s)	1289, 1760
BseSI	GKGCMC	1 cut(s)	1510
BseXI	GCAGC	8 cut(s)	223, 607, 635, 834, 1057, 1132, 1565, 1645
BsgI	GTGCAG	2 cut(s)	827, 1131
Bsh1236I	CGCG	8 cut(s)	16, 23, 31, 96, 193, 287, 445, 447
BshFI	GGCC	6 cut(s)	76, 505, 558, 793, 800, 1455
BshVI	ATCGAT	1 cut(s)	163
BsiHKAI	GWGCWC	3 cut(s)	768, 1510, 1525
BsiHKCI	CYCGRG	1 cut(s)	71
BsiSI	CCGG	3 cut(s)	72, 996, 1005
BslFI	GGGAC	4 cut(s)	279, 1069, 1401, 1701
BslI	CCNNNNNNNGG	3 cut(s)	401, 1158, 1496
BsmAI	GTCTC	3 cut(s)	249, 326, 1166
BsmFI	GGGAC	4 cut(s)	279, 1069, 1401, 1701
BsmI	GAATGC	3 cut(s)	1354, 1361, 1568
BsnI	GGCC	6 cut(s)	76, 505, 558, 793, 800, 1455
Bso31I	GGTCTC	1 cut(s)	249
BsoBI	CYCGRG	1 cut(s)	71
Bsp1286I	GDGCHC	4 cut(s)	768, 943, 1510, 1525
Bsp1407I	TGTACA	1 cut(s)	1030
Bsp143I	GATC	8 cut(s)	115, 160, 492, 565, 1135, 1162, 1221, 1432
Bsp1720I	GCTNAGC	1 cut(s)	35
Bsp68I	TCGCGA	1 cut(s)	16
BspANI	GGCC	6 cut(s)	76, 505, 558, 793, 800, 1455
BspCNI	CTCAG	2 cut(s)	27, 1294
BspDI	ATCGAT	1 cut(s)	163
BspFNI	CGCG	8 cut(s)	16, 23, 31, 96, 193, 287, 445, 447
BspHI	TCATGA	1 cut(s)	1804
BspLI	GGNNCC	6 cut(s)	994, 1057, 1164, 1716, 1717, 1781
BspMAI	CTGCAG	1 cut(s)	625
BspPI	GGATC	4 cut(s)	110, 1130, 1157, 1170
BspTNI	GGTCTC	1 cut(s)	249
BsrDI	GCAATG	2 cut(s)	1296, 1447
BsrGI	TGTACA	1 cut(s)	1030
BsrI	ACTGG	3 cut(s)	142, 653, 1059
BssECI	CCNNGG	8 cut(s)	71, 119, 559, 725, 795, 943, 1489, 1490
BssMI	GATC	8 cut(s)	115, 160, 492, 565, 1135, 1162, 1221, 1432
BssNI	GRCGYC	3 cut(s)	26, 279, 439
BssT1I	CCWWGG	5 cut(s)	119, 559, 725, 795, 943
Bst2UI	CCWGG	2 cut(s)	1491, 1691
Bst4CI	ACNGT	4 cut(s)	400, 701, 860, 934
Bst6I	CTCTTC	1 cut(s)	735
BstACI	GRCGYC	3 cut(s)	26, 279, 439
BstAPI	GCANNNNNTGC	1 cut(s)	1154
BstAUI	TGTACA	1 cut(s)	1030
BstC8I	GCNNGC	5 cut(s)	443, 507, 1383, 1551, 1671
BstDEI	CTNAG	4 cut(s)	35, 1019, 1184, 1302
BstENI	CCTNNNNNAGG	2 cut(s)	399, 1156
BstF5I	GGATG	3 cut(s)	57, 1543, 1593
BstFNI	CGCG	8 cut(s)	16, 23, 31, 96, 193, 287, 445, 447
BstH2I	RGCGCY	1 cut(s)	102
BstHHI	GCGC	3 cut(s)	96, 101, 447
BstKTI	GATC	8 cut(s)	118, 163, 495, 568, 1138, 1165, 1224, 1435
BstMAI	GTCTC	3 cut(s)	249, 326, 1166
BstMBI	GATC	8 cut(s)	115, 160, 492, 565, 1135, 1162, 1221, 1432
BstMWI	GCNNNNNNNGC	8 cut(s)	658, 908, 1001, 1034, 1154, 1325, 1370, 1679
BstNI	CCWGG	2 cut(s)	1491, 1691
BstNSI	RCATGY	4 cut(s)	1385, 1480, 1546, 1738
BstPAI	GACNNNNGTC	1 cut(s)	955
BstSCI	CCNGG	4 cut(s)	70, 71, 1489, 1689
BstSFI	CTRYAG	1 cut(s)	621
BstSLI	GKGCMC	1 cut(s)	1510
BstUI	CGCG	8 cut(s)	16, 23, 31, 96, 193, 287, 445, 447
BstV1I	GCAGC	8 cut(s)	223, 607, 635, 834, 1057, 1132, 1565, 1645
BstV2I	GAAGAC	3 cut(s)	1258, 1596, 1692
BstX2I	RGATCY	1 cut(s)	1162
BstYI	RGATCY	1 cut(s)	1162
Bsu15I	ATCGAT	1 cut(s)	163
BsuI	GTATCC	1 cut(s)	127
BsuRI	GGCC	6 cut(s)	76, 505, 558, 793, 800, 1455
BsuTUI	ATCGAT	1 cut(s)	163
BtgZI	GCGATG	1 cut(s)	268
BtsCI	GGATG	3 cut(s)	57, 1543, 1593
BtsI	GCAGTG	1 cut(s)	1359
BtsIMutI	CAGTG	4 cut(s)	150, 466, 1066, 1359
BtuMI	TCGCGA	1 cut(s)	16
Cac8I	GCNNGC	5 cut(s)	443, 507, 1383, 1551, 1671
CaiI	CAGNNNCTG	2 cut(s)	1175, 1559
CciI	TCATGA	1 cut(s)	1804
CfoI	GCGC	3 cut(s)	96, 101, 447
Cfr13I	GGNCC	4 cut(s)	74, 792, 1056, 1715
Cfr9I	CCCGGG	1 cut(s)	71
ClaI	ATCGAT	1 cut(s)	163
CseI	GACGC	3 cut(s)	15, 268, 447
Csp6I	GTAC	4 cut(s)	672, 745, 1031, 1480
CspCI	CAANNNNNGTGG	4 cut(s)	101, 136, 812, 847
CviQI	GTAC	4 cut(s)	672, 745, 1031, 1480
DdeI	CTNAG	4 cut(s)	35, 1019, 1184, 1302
DpnI	GATC	8 cut(s)	117, 162, 494, 567, 1137, 1164, 1223, 1434
DpnII	GATC	8 cut(s)	115, 160, 492, 565, 1135, 1162, 1221, 1432
DraIII	CACNNNGTG	1 cut(s)	194
DrdI	GACNNNNNNGTC	1 cut(s)	177
DseDI	GACNNNNNNGTC	1 cut(s)	177
EaeI	YGGCCR	1 cut(s)	1453
Eam1104I	CTCTTC	1 cut(s)	735
EarI	CTCTTC	1 cut(s)	735
Ecl136II	GAGCTC	1 cut(s)	766
Eco130I	CCWWGG	5 cut(s)	119, 559, 725, 795, 943
Eco24I	GRGCYC	2 cut(s)	768, 943
Eco31I	GGTCTC	1 cut(s)	249
Eco32I	GATATC	1 cut(s)	1533
Eco47I	GGWCC	2 cut(s)	1056, 1715
Eco53kI	GAGCTC	1 cut(s)	766
Eco57I	CTGAAG	2 cut(s)	1197, 1386
Eco88I	CYCGRG	1 cut(s)	71
EcoICRI	GAGCTC	1 cut(s)	766
EcoNI	CCTNNNNNAGG	2 cut(s)	399, 1156
EcoO109I	RGGNCCY	1 cut(s)	1715
EcoRII	CCWGG	2 cut(s)	1489, 1689
EcoRV	GATATC	1 cut(s)	1533
EcoT14I	CCWWGG	5 cut(s)	119, 559, 725, 795, 943
EcoT38I	GRGCYC	2 cut(s)	768, 943
ErhI	CCWWGG	5 cut(s)	119, 559, 725, 795, 943
FalI	AAGNNNNNCTT	2 cut(s)	1592, 1624
FaqI	GGGAC	4 cut(s)	279, 1069, 1401, 1701
FauI	CCCGC	4 cut(s)	256, 450, 1378, 1775
FblI	GTMKAC	4 cut(s)	59, 181, 949, 1201
FokI	GGATG	3 cut(s)	64, 1550, 1580
FriOI	GRGCYC	2 cut(s)	768, 943
FspBI	CTAG	7 cut(s)	560, 726, 926, 1109, 1158, 1197, 1436
GlaI	GCGC	3 cut(s)	95, 100, 446
GsuI	CTGGAG	1 cut(s)	269
HaeII	RGCGCY	1 cut(s)	102
HaeIII	GGCC	6 cut(s)	76, 505, 558, 793, 800, 1455
HapII	CCGG	3 cut(s)	72, 996, 1005
HgaI	GACGC	3 cut(s)	15, 268, 447
HhaI	GCGC	3 cut(s)	96, 101, 447
Hin1I	GRCGYC	3 cut(s)	26, 279, 439
Hin6I	GCGC	3 cut(s)	94, 99, 445
HinP1I	GCGC	3 cut(s)	94, 99, 445
HincII	GTYRAC	2 cut(s)	60, 950
HindII	GTYRAC	2 cut(s)	60, 950
HinfI	GANTC	8 cut(s)	18, 67, 233, 1008, 1254, 1298, 1304, 1336
HpaII	CCGG	3 cut(s)	72, 996, 1005
HphI	GGTGA	3 cut(s)	575, 1400, 1718
Hpy166II	GTNNAC	9 cut(s)	60, 88, 182, 950, 970, 1202, 1508, 1756, 1789
Hpy188I	TCNGA	6 cut(s)	961, 1171, 1303, 1537, 1561, 1598
Hpy188III	TCNNGA	5 cut(s)	15, 248, 1044, 1251, 1805
Hpy8I	GTNNAC	9 cut(s)	60, 88, 182, 950, 970, 1202, 1508, 1756, 1789
Hpy99I	CGWCG	3 cut(s)	31, 49, 64
HpyAV	CCTTC	4 cut(s)	269, 728, 1172, 1691
HpyCH4III	ACNGT	4 cut(s)	400, 701, 860, 934
HpyCH4IV	ACGT	2 cut(s)	787, 853
HpyF10VI	GCNNNNNNNGC	8 cut(s)	658, 908, 1001, 1034, 1154, 1325, 1370, 1679
HpyF3I	CTNAG	4 cut(s)	35, 1019, 1184, 1302
HpySE526I	ACGT	2 cut(s)	787, 853
Hsp92I	GRCGYC	3 cut(s)	26, 279, 439
HspAI	GCGC	3 cut(s)	94, 99, 445
KflI	GGGWCCC	1 cut(s)	1715
Kzo9I	GATC	8 cut(s)	115, 160, 492, 565, 1135, 1162, 1221, 1432
LmnI	GCTCC	4 cut(s)	382, 992, 1193, 1655
Lsp1109I	GCAGC	8 cut(s)	223, 607, 635, 834, 1057, 1132, 1565, 1645
LweI	GCATC	3 cut(s)	1360, 1565, 1614
MaeI	CTAG	7 cut(s)	560, 726, 926, 1109, 1158, 1197, 1436
MaeII	ACGT	2 cut(s)	787, 853
MaeIII	GTNAC	2 cut(s)	854, 1111
MalI	GATC	8 cut(s)	117, 162, 494, 567, 1137, 1164, 1223, 1434
MboI	GATC	8 cut(s)	115, 160, 492, 565, 1135, 1162, 1221, 1432
MboII	GAAGA	6 cut(s)	752, 1231, 1258, 1379, 1601, 1697
MfeI	CAATTG	1 cut(s)	499
MflI	RGATCY	1 cut(s)	1162
MhlI	GDGCHC	4 cut(s)	768, 943, 1510, 1525
MluCI	AATT	4 cut(s)	418, 499, 582, 753
MlyI	GAGTC	4 cut(s)	242, 1002, 1263, 1313
MmeI	TCCRAC	3 cut(s)	711, 1364, 1633
MroXI	GAANNNNTTC	1 cut(s)	777
MseI	TTAA	5 cut(s)	633, 1215, 1284, 1377, 1461
MslI	CAYNNNNRTG	2 cut(s)	1386, 1561
MspA1I	CMGCKG	1 cut(s)	626
MspI	CCGG	3 cut(s)	72, 996, 1005
MspR9I	CCNGG	4 cut(s)	72, 73, 1491, 1691
MteI	GCGCNGCGC	1 cut(s)	97
MunI	CAATTG	1 cut(s)	499
Mva1269I	GAATGC	3 cut(s)	1354, 1361, 1568
MvaI	CCWGG	2 cut(s)	1491, 1691
MvnI	CGCG	8 cut(s)	16, 23, 31, 96, 193, 287, 445, 447
MwoI	GCNNNNNNNGC	8 cut(s)	658, 908, 1001, 1034, 1154, 1325, 1370, 1679
NciI	CCSGG	2 cut(s)	72, 73
NdeII	GATC	8 cut(s)	115, 160, 492, 565, 1135, 1162, 1221, 1432
NlaIV	GGNNCC	6 cut(s)	994, 1057, 1164, 1716, 1717, 1781
NmeAIII	GCCGAG	1 cut(s)	534
NmuCI	GTSAC	1 cut(s)	1111
NruI	TCGCGA	1 cut(s)	16
NspI	RCATGY	4 cut(s)	1385, 1480, 1546, 1738
PaeI	GCATGC	1 cut(s)	1385
PagI	TCATGA	1 cut(s)	1804
PasI	CCCWGGG	1 cut(s)	1490
PciI	ACATGT	2 cut(s)	1476, 1734
PctI	GAATGC	3 cut(s)	1354, 1361, 1568
PdmI	GAANNNNTTC	1 cut(s)	777
PfeI	GAWTC	4 cut(s)	18, 67, 1298, 1336
PflMI	CCANNNNNTGG	1 cut(s)	1496
PleI	GAGTC	4 cut(s)	241, 1002, 1262, 1312
PpsI	GAGTC	4 cut(s)	241, 1002, 1262, 1312
PpuMI	RGGWCCY	1 cut(s)	1715
PscI	ACATGT	2 cut(s)	1476, 1734
PshAI	GACNNNNGTC	1 cut(s)	955
PshBI	ATTAAT	1 cut(s)	633
Psp124BI	GAGCTC	1 cut(s)	768
Psp1406I	AACGTT	1 cut(s)	853
Psp5II	RGGWCCY	1 cut(s)	1715
Psp6I	CCWGG	2 cut(s)	1489, 1689
PspGI	CCWGG	2 cut(s)	1489, 1689
PspN4I	GGNNCC	6 cut(s)	994, 1057, 1164, 1716, 1717, 1781
PspPI	GGNCC	4 cut(s)	74, 792, 1056, 1715
PspPPI	RGGWCCY	1 cut(s)	1715
PstI	CTGCAG	1 cut(s)	625
PstNI	CAGNNNCTG	2 cut(s)	1175, 1559
PsuI	RGATCY	1 cut(s)	1162
PvuII	CAGCTG	1 cut(s)	626
RruI	TCGCGA	1 cut(s)	16
RsaI	GTAC	4 cut(s)	673, 746, 1032, 1481
RsaNI	GTAC	4 cut(s)	672, 745, 1031, 1480
RseI	CAYNNNNRTG	2 cut(s)	1386, 1561
SacI	GAGCTC	1 cut(s)	768
SalI	GTCGAC	2 cut(s)	58, 948
SaqAI	TTAA	5 cut(s)	633, 1215, 1284, 1377, 1461
Sau3AI	GATC	8 cut(s)	115, 160, 492, 565, 1135, 1162, 1221, 1432
Sau96I	GGNCC	4 cut(s)	74, 792, 1056, 1715
SchI	GAGTC	4 cut(s)	242, 1002, 1263, 1313
ScrFI	CCNGG	4 cut(s)	72, 73, 1491, 1691
SduI	GDGCHC	4 cut(s)	768, 943, 1510, 1525
SfaNI	GCATC	3 cut(s)	1360, 1565, 1614
SfcI	CTRYAG	1 cut(s)	621
SinI	GGWCC	2 cut(s)	1056, 1715
SmaI	CCCGGG	1 cut(s)	73
SmiMI	CAYNNNNRTG	2 cut(s)	1386, 1561
SphI	GCATGC	1 cut(s)	1385
Sse9I	AATT	4 cut(s)	418, 499, 582, 753
SspMI	CTAG	7 cut(s)	560, 726, 926, 1109, 1158, 1197, 1436
SstI	GAGCTC	1 cut(s)	768
StyD4I	CCNGG	4 cut(s)	70, 71, 1489, 1689
StyI	CCWWGG	5 cut(s)	119, 559, 725, 795, 943
TaaI	ACNGT	4 cut(s)	400, 701, 860, 934
TaiI	ACGT	2 cut(s)	790, 856
TaqI	TCGA	9 cut(s)	44, 59, 163, 175, 207, 346, 718, 949, 1334
TaqII	GACCGA	1 cut(s)	231
TasI	AATT	4 cut(s)	418, 499, 582, 753
TatI	WGTACW	2 cut(s)	744, 1030
TauI	GCSGC	5 cut(s)	26, 34, 99, 1070, 1676
TfiI	GAWTC	4 cut(s)	18, 67, 1298, 1336
Tru1I	TTAA	5 cut(s)	633, 1215, 1284, 1377, 1461
Tru9I	TTAA	5 cut(s)	633, 1215, 1284, 1377, 1461
TscAI	CASTG	4 cut(s)	157, 466, 1066, 1366
TseFI	GTSAC	1 cut(s)	1111
TseI	GCWGC	8 cut(s)	211, 620, 623, 847, 1070, 1145, 1553, 1658
Tsp45I	GTSAC	1 cut(s)	1111
TspDTI	ATGAA	5 cut(s)	217, 770, 842, 1602, 1793
TspGWI	ACGGA	1 cut(s)	1297
TspMI	CCCGGG	1 cut(s)	71
TspRI	CASTG	4 cut(s)	157, 466, 1066, 1366
Van91I	CCANNNNNTGG	1 cut(s)	1496
VneI	GTGCAC	1 cut(s)	1506
VpaK11BI	GGWCC	2 cut(s)	1056, 1715
VspI	ATTAAT	1 cut(s)	633
XagI	CCTNNNNNAGG	2 cut(s)	399, 1156
XceI	RCATGY	4 cut(s)	1385, 1480, 1546, 1738
XmaI	CCCGGG	1 cut(s)	71
XmaJI	CCTAGG	2 cut(s)	559, 725
XmiI	GTMKAC	4 cut(s)	59, 181, 949, 1201
XmnI	GAANNNNTTC	1 cut(s)	777
XspI	CTAG	7 cut(s)	560, 726, 926, 1109, 1158, 1197, 1436

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.