Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0013057

Physical Location & Seq

Genomic Coordinates Forward (+)

13799246 .. 13805603

Gene Structure 6358 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g12470.19

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2160 bp

ATGAGAACATCACTAGCGGCCGACGCCATCATACTTCCTGGTATAAATACCCCTCGCTGCCCGCTGTCCATCTGGGCAGCCTTCCCCCTCTTCCGTGGCCACTCACAGTCGCACTTCCGCGTACACTCCCCGCTATCCGAAAATCCCGGTCAGCTCCAGTCCAGCTCTCTCATTCTCTCCTCTTTCAATTTCAGCGGCTTCTTTTCCACAGACAAAAATGGAAATAAAAATAATTCAATAAATCGAAAATTCAAAAAAAAAAGAAAAAGAAATTGTATTGATCTGAAGTCGCACTCGGTAGTAAGAAGGCGTCGGTTTTGTTCGTTTGTTTGGGTCCGCATAATGTGGAAGGCAGCGCGATTCGCCGCGTCGCGGTTGAGCAGCCGGTCGACGAGGGGGTTCTCGACGGCGATTCCCGCCCCCTGTATCGTTCGCAAGCGCGGCGCCGATATTCTCCACGATCCATGGTTTAACAAGGACACTGGATTTCCGTTGACTGAAAGAGATCGATTAGGACTTCGCGGTCTCCTCCCACCTCGTGTCATATCATTCGAGCAGCAATATGCTCGTTTCATGGAGTCCTATCGTTCCCTAGAGAAAAATACTAAGGGCCAGCCAGAGGGTGTTGTGGCCTTGGCTAAATGGAGGATCTTAAATAGACTGCATGACAGGAACGAGACCTTGTACTACCGAGTCCTTATTGACAACATCCAAGATTTTGCTCCCGTAATTTACACTCCTACAGTAGGATTAGTCTGTCAAAATTATTCCGGTTTATTTAGACGTCCCCGTGGAATGTATTTCAGTGCAAAGGATAAAGGGGAGATGATGTCTATGATCTACAACTGGCCAGCACCTCAGGTAGACATGATTGTCCTCACAGATGGCAGTCGTATCCTTGGCCTAGGGGACCTTGGAGTTCAGGGAATTGGAATTCCGATTGGAAAACTTGATATGTATGTTGCTGCAGCTGGTATTAATCCACAAAGAATACTACCGGTTATGCTAGATGTTGGTACTAACAACCAAAAGCTACTTGAAGACCGTCTTTATTTAGGACTTCGACAACCTAGGTTGGAAGGAGAAGAGTACATATCAATTGTTGAAGAATTCATGGAAGCTGTTCATACACGTTGGCCCAAGGCCATTGTGCAGTTTGAGGATTTCCAAATGAAGTGGGCTTTTGAAACACTGCAACGCTATCGTAAAAGGTTTTGCACGTTCAATGATGACATACAGGGAACTGCCGGTGTTGCACTTGCAGGACTATTAGGAACTGTAAGAGTGCAAGGTCGACCGTTGAGTGACTTTGCTAAACAAAAGATAGTTGTTGTGGGAGCCGGAAGTGCGGGACTTGGAGTTCTTAACATGGCTGTACAGGCTGTTGCAAGAATGTCAGGGAACGGTGAAGCTGCTGCAAAAAATAATTTTTTCCTGATTGATAAAGATGGTCTAGTTACAAAAGAGAGAAATAATCTTGATCCCATGGCTGCACCCTTTGCTAAAGAACCGGGAGCAATTGATGGGCTTAGGGAGGGAGCTAGTCTACTTGAAGTGGTTAAGAAGGTCAAGCCTCATGTGCTTCTTGGTTTGTCTGGAGTTGGTGGTGTTTTCAATCATGAGGTACTTAAAGCAATGCGAGAATCAGATTCAACTAAACCTGCTATTTTTGCTATGTCAAATCCAACCATGAATGCTGAATGCACTGCTGAAGATGCTTTTAAGCATGCTGGTGAAAGCATCGTCTTTGGAAGTGGAAGCCCCTTTGATAATGTTGACCTTGGCAACGGAAAAGTAGGCCATGTAAATCAAGCAAATAACATGTATCTGTTTCCAGGGATTGGTTTAGGAGCACTTCTCTCAGGAGCTCGTATTATATCAGATGGCATGTTGCAAGCAGCTTCTGAATGCCTCGCTTCATACATAACAGACGTAGATATCCAGAAGGGCATCTTGTACCCATCTATTGATTGTATCCGGAATATAACCGTGGAGGTTGGGGCTGCTGTCCTGCGGGCAGCTGTTGCAGAAGAACTGGCAGAGGGACACTCTGAAGTCGGGCCCAAAGAGCTCATGAACATGTGCAAAGAGGAGACTGTGGAGTATGTGAGTCGCAGTATGTGGTTCCCGGTTTACAGCCCTCTAGTTCACGAAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004470 GO:0004471 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0006082 GO:0006090 GO:0006108 GO:0008144 GO:0008150 GO:0008152 GO:0008270 GO:0009507 GO:0009536 GO:0009987 GO:0016491 GO:0016614 GO:0016615 GO:0016616 GO:0017076 GO:0019752 GO:0030554 GO:0031974 GO:0032553 GO:0032555 GO:0032559 GO:0032787 GO:0035639 GO:0036094 GO:0042802 GO:0042803 GO:0043167 GO:0043168 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043436 GO:0043648 GO:0044237 GO:0044281 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046872 GO:0046914 GO:0046983 GO:0050897 GO:0055114 GO:0070013 GO:0071704 GO:0097159 GO:0097367 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00620 ko00710 ko01100 ko01120 ko01200 map00620 map00710 map01100 map01120 map01200

Pfam Domains

Protein Families

Malic_M malic

Protein Analysis

720

Amino Acids

79.63

Weight (kDa)

9.3

Isoelectric Point (pI)

36.43

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013057)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G00570
fragaria_vesca	FvH4_7g13590
malus_domestica	MD01G1052400.v1.1 MD07G1129000.v1.1
prunus_persica	Prupe.2G160000_v2.0.a1 Prupe.2G160000_v2.0.a1 Prupe.2G160000_v2.0.a1
pyrus_communis	pycom01g07810 pycom07g12470
rosa_chinensis	RchiOBHm_Chr1g0353381
rosa_laevigata	RLG00000028273
rosa_multiflora	Rmu_sc0001207.1_g000013
rosa_roxburghii	Rroxscaffold_4G00301880
rosa_rugosa	Rorug01G0235600
rosa_samantha	Rh1AG247800 Rh1BG217600 Rh1CG231500
rosa_wichuraiana	Rw1G021590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	522, 872
AatII	GACGTC	1 cut(s)	787
Acc36I	ACCTGC	1 cut(s)	1669
AccB1I	GGYRCC	1 cut(s)	443
AccB7I	CCANNNNNTGG	1 cut(s)	1841
AccI	GTMKAC	4 cut(s)	389, 864, 1294, 1546
AccII	CGCG	6 cut(s)	120, 358, 368, 373, 441, 522
AccIII	TCCGGA	1 cut(s)	1977
AclWI	GGATC	3 cut(s)	455, 656, 1475
AcoI	YGGCCR	3 cut(s)	18, 97, 848
AcsI	RAATTY	3 cut(s)	248, 933, 1109
AcuI	CTGAAG	3 cut(s)	305, 1731, 2073
AcyI	GRCGYC	4 cut(s)	24, 310, 444, 784
AdeI	CACNNNGTG	1 cut(s)	539
AfaI	GTAC	7 cut(s)	123, 686, 1018, 1091, 1377, 1626, 1958
AfiI	CCNNNNNNNGG	4 cut(s)	372, 619, 746, 1841
AflIII	ACRYGT	3 cut(s)	1130, 1821, 2079
AgeI	ACCGGT	1 cut(s)	997
AjnI	CCWGG	2 cut(s)	37, 1834
AloI	GAACNNNNNNTCC	2 cut(s)	1344, 1376
Alw21I	GWGCWC	3 cut(s)	1855, 1870, 2073
Alw26I	GTCTC	3 cut(s)	530, 671, 2087
AlwI	GGATC	3 cut(s)	455, 656, 1475
AlwNI	CAGNNNCTG	1 cut(s)	1904
Aor13HI	TCCGGA	1 cut(s)	1977
ApaI	GGGCCC	1 cut(s)	2064
ApoI	RAATTY	3 cut(s)	248, 933, 1109
AseI	ATTAAT	1 cut(s)	978
AsiGI	ACCGGT	1 cut(s)	997
Asp700I	GAANNNNTTC	1 cut(s)	1122
AspA2I	CCTAGG	2 cut(s)	904, 1070
AspLEI	GCGC	3 cut(s)	358, 441, 446
AspS9I	GGNCC	6 cut(s)	334, 610, 910, 1137, 2060, 2061
AsuC2I	CCSGG	3 cut(s)	147, 1512, 2129
AsuHPI	GGTGA	2 cut(s)	1418, 1745
AvaII	GGWCC	2 cut(s)	334, 910
AvrII	CCTAGG	2 cut(s)	904, 1070
AxyI	CCTNAGG	1 cut(s)	858
BaeGI	GKGCMC	1 cut(s)	2064
BalI	TGGCCA	2 cut(s)	99, 850
BanI	GGYRCC	1 cut(s)	443
BanII	GRGCYC	3 cut(s)	1870, 2064, 2073
BauI	CACGAG	1 cut(s)	537
BbsI	GAAGAC	1 cut(s)	1047
Bbv12I	GWGCWC	3 cut(s)	1855, 1870, 2073
BccI	CCATC	7 cut(s)	35, 77, 878, 1442, 1517, 1877, 1969
BceAI	ACGGC	1 cut(s)	423
BcgI	CGANNNNNNTGC	4 cut(s)	548, 582, 1184, 1218
BciT130I	CCWGG	2 cut(s)	39, 1836
BciVI	GTATCC	2 cut(s)	905, 1985
BcnI	CCSGG	3 cut(s)	147, 1512, 2129
BcoDI	GTCTC	3 cut(s)	530, 671, 2087
BfaI	CTAG	8 cut(s)	14, 593, 905, 1007, 1071, 1454, 1542, 2144
BfmI	CTRYAG	2 cut(s)	741, 966
BfoI	RGCGCY	1 cut(s)	447
BfuAI	ACCTGC	1 cut(s)	1669
BfuI	GTATCC	2 cut(s)	905, 1985
BlnI	CCTAGG	2 cut(s)	904, 1070
Bme1390I	CCNGG	5 cut(s)	39, 147, 1512, 1836, 2129
Bme18I	GGWCC	2 cut(s)	334, 910
BmgT120I	GGNCC	6 cut(s)	334, 610, 910, 1137, 2060, 2061
BmiI	GGNNCC	6 cut(s)	335, 445, 911, 1339, 2062, 2126
BmrFI	CCNGG	5 cut(s)	39, 147, 1512, 1836, 2129
BmsI	GCATC	3 cut(s)	1705, 1749, 1959
BpiI	GAAGAC	1 cut(s)	1047
BplI	GAGNNNNNCTC	4 cut(s)	1842, 1874, 2033, 2065
BpmI	CTGGAG	2 cut(s)	140, 1617
Bpu10I	CCTNAGC	1 cut(s)	1529
BpuMI	CCSGG	3 cut(s)	147, 1512, 2129
Bsa29I	ATCGAT	1 cut(s)	508
BsaHI	GRCGYC	4 cut(s)	24, 310, 444, 784
BsaI	GGTCTC	2 cut(s)	530, 671
BsaWI	WCCGGW	3 cut(s)	770, 997, 1977
BsaXI	ACNNNNNCTCC	2 cut(s)	815, 845
Bsc4I	CCNNNNNNNGG	4 cut(s)	372, 619, 746, 1841
Bse118I	RCCGGY	3 cut(s)	384, 997, 1247
Bse1I	ACTGG	4 cut(s)	157, 487, 851, 2040
Bse21I	CCTNAGG	1 cut(s)	858
Bse3DI	GCAATG	1 cut(s)	1641
BseAI	TCCGGA	1 cut(s)	1977
BseBI	CCWGG	2 cut(s)	39, 1836
BseCI	ATCGAT	1 cut(s)	508
BseGI	GGATG	1 cut(s)	708
BseLI	CCNNNNNNNGG	4 cut(s)	372, 619, 746, 1841
BseMI	GCAATG	1 cut(s)	1641
BseMII	CTCAG	2 cut(s)	872, 1875
BseNI	ACTGG	4 cut(s)	157, 487, 851, 2040
BseRI	GAGGAG	3 cut(s)	169, 518, 2105
BseSI	GKGCMC	1 cut(s)	2064
BseX3I	CGGCCG	1 cut(s)	18
BsgI	GTGCAG	2 cut(s)	1172, 1476
Bsh1236I	CGCG	6 cut(s)	120, 358, 368, 373, 441, 522
Bsh1285I	CGRYCG	3 cut(s)	21, 389, 1298
BshNI	GGYRCC	1 cut(s)	443
BshTI	ACCGGT	1 cut(s)	997
BshVI	ATCGAT	1 cut(s)	508
BsiEI	CGRYCG	3 cut(s)	21, 389, 1298
BsiHKAI	GWGCWC	3 cut(s)	1855, 1870, 2073
BsiSI	CCGG	9 cut(s)	147, 385, 771, 998, 1248, 1341, 1511, 1978, 2129
BslFI	GGGAC	4 cut(s)	771, 923, 1365, 2058
BslI	CCNNNNNNNGG	4 cut(s)	372, 619, 746, 1841
BsmAI	GTCTC	3 cut(s)	530, 671, 2087
BsmFI	GGGAC	4 cut(s)	771, 923, 1365, 2058
BsmI	GAATGC	3 cut(s)	1699, 1706, 1913
Bso31I	GGTCTC	2 cut(s)	530, 671
Bsp120I	GGGCCC	1 cut(s)	2060
Bsp1286I	GDGCHC	4 cut(s)	1855, 1870, 2064, 2073
Bsp13I	TCCGGA	1 cut(s)	1977
Bsp1407I	TGTACA	1 cut(s)	1375
Bsp143I	GATC	6 cut(s)	280, 460, 505, 648, 837, 1480
Bsp19I	CCATGG	2 cut(s)	464, 1485
BspCNI	CTCAG	2 cut(s)	871, 1874
BspDI	ATCGAT	1 cut(s)	508
BspEI	TCCGGA	1 cut(s)	1977
BspFNI	CGCG	6 cut(s)	120, 358, 368, 373, 441, 522
BspHI	TCATGA	2 cut(s)	1618, 2073
BspLI	GGNNCC	6 cut(s)	335, 445, 911, 1339, 2062, 2126
BspMAI	CTGCAG	1 cut(s)	970
BspMI	ACCTGC	1 cut(s)	1669
BspPI	GGATC	3 cut(s)	455, 656, 1475
BspT107I	GGYRCC	1 cut(s)	443
BspTNI	GGTCTC	2 cut(s)	530, 671
BsrDI	GCAATG	1 cut(s)	1641
BsrFI	RCCGGY	3 cut(s)	384, 997, 1247
BsrGI	TGTACA	1 cut(s)	1375
BsrI	ACTGG	4 cut(s)	157, 487, 851, 2040
BssAI	RCCGGY	3 cut(s)	384, 997, 1247
BssMI	GATC	6 cut(s)	280, 460, 505, 648, 837, 1480
BssNI	GRCGYC	4 cut(s)	24, 310, 444, 784
BssSI	CACGAG	1 cut(s)	537
BssT1I	CCWWGG	9 cut(s)	464, 633, 898, 904, 913, 1070, 1140, 1485, 1780
Bst2BI	CACGAG	1 cut(s)	537
Bst2UI	CCWGG	2 cut(s)	39, 1836
Bst4CI	ACNGT	8 cut(s)	108, 745, 1046, 1279, 1299, 1406, 1990, 2098
Bst6I	CTCTTC	2 cut(s)	95, 1080
BstACI	GRCGYC	4 cut(s)	24, 310, 444, 784
BstAPI	GCANNNNNTGC	2 cut(s)	1499, 2024
BstAUI	TGTACA	1 cut(s)	1375
BstC8I	GCNNGC	7 cut(s)	62, 437, 614, 852, 1728, 1896, 2016
BstDEI	CTNAG	4 cut(s)	606, 858, 1529, 1861
BstDSI	CCRYGG	5 cut(s)	94, 464, 790, 1485, 1989
BstENI	CCTNNNNNAGG	1 cut(s)	744
BstF5I	GGATG	1 cut(s)	708
BstFNI	CGCG	6 cut(s)	120, 358, 368, 373, 441, 522
BstH2I	RGCGCY	1 cut(s)	447
BstHHI	GCGC	3 cut(s)	358, 441, 446
BstKTI	GATC	6 cut(s)	283, 463, 508, 651, 840, 1483
BstMAI	GTCTC	3 cut(s)	530, 671, 2087
BstMBI	GATC	6 cut(s)	280, 460, 505, 648, 837, 1480
BstMCI	CGRYCG	3 cut(s)	21, 389, 1298
BstNI	CCWGG	2 cut(s)	39, 1836
BstNSI	RCATGY	4 cut(s)	1730, 1825, 1891, 2083
BstSCI	CCNGG	5 cut(s)	37, 145, 1510, 1834, 2127
BstSFI	CTRYAG	2 cut(s)	741, 966
BstSLI	GKGCMC	1 cut(s)	2064
BstUI	CGCG	6 cut(s)	120, 358, 368, 373, 441, 522
BstV2I	GAAGAC	1 cut(s)	1047
BstX2I	RGATCY	1 cut(s)	648
BstYI	RGATCY	1 cut(s)	648
BstZI	CGGCCG	1 cut(s)	18
Bsu15I	ATCGAT	1 cut(s)	508
Bsu36I	CCTNAGG	1 cut(s)	858
BsuI	GTATCC	2 cut(s)	905, 1985
BsuTUI	ATCGAT	1 cut(s)	508
BtgI	CCRYGG	5 cut(s)	94, 464, 790, 1485, 1989
BtsCI	GGATG	1 cut(s)	708
BtsI	GCAGTG	2 cut(s)	1190, 1704
BtsIMutI	CAGTG	4 cut(s)	480, 811, 1190, 1704
BveI	ACCTGC	1 cut(s)	1669
Cac8I	GCNNGC	7 cut(s)	62, 437, 614, 852, 1728, 1896, 2016
CaiI	CAGNNNCTG	1 cut(s)	1904
CciI	TCATGA	2 cut(s)	1618, 2073
CfoI	GCGC	3 cut(s)	358, 441, 446
Cfr10I	RCCGGY	3 cut(s)	384, 997, 1247
Cfr13I	GGNCC	6 cut(s)	334, 610, 910, 1137, 2060, 2061
ClaI	ATCGAT	1 cut(s)	508
CseI	GACGC	3 cut(s)	32, 299, 357
Csp6I	GTAC	7 cut(s)	122, 685, 1017, 1090, 1376, 1625, 1957
CspAI	ACCGGT	1 cut(s)	997
CspCI	CAANNNNNGTGG	2 cut(s)	1157, 1192
CviQI	GTAC	7 cut(s)	122, 685, 1017, 1090, 1376, 1625, 1957
DdeI	CTNAG	4 cut(s)	606, 858, 1529, 1861
DinI	GGCGCC	1 cut(s)	445
DpnI	GATC	6 cut(s)	282, 462, 507, 650, 839, 1482
DpnII	GATC	6 cut(s)	280, 460, 505, 648, 837, 1480
DraIII	CACNNNGTG	1 cut(s)	539
DrdI	GACNNNNNNGTC	2 cut(s)	522, 872
DseDI	GACNNNNNNGTC	2 cut(s)	522, 872
EaeI	YGGCCR	3 cut(s)	18, 97, 848
EagI	CGGCCG	1 cut(s)	18
Eam1104I	CTCTTC	2 cut(s)	95, 1080
EarI	CTCTTC	2 cut(s)	95, 1080
Ecl136II	GAGCTC	2 cut(s)	1868, 2071
EclXI	CGGCCG	1 cut(s)	18
Eco130I	CCWWGG	9 cut(s)	464, 633, 898, 904, 913, 1070, 1140, 1485, 1780
Eco24I	GRGCYC	3 cut(s)	1870, 2064, 2073
Eco31I	GGTCTC	2 cut(s)	530, 671
Eco32I	GATATC	1 cut(s)	1939
Eco47I	GGWCC	2 cut(s)	334, 910
Eco52I	CGGCCG	1 cut(s)	18
Eco53kI	GAGCTC	2 cut(s)	1868, 2071
Eco57I	CTGAAG	3 cut(s)	305, 1731, 2073
Eco81I	CCTNAGG	1 cut(s)	858
EcoICRI	GAGCTC	2 cut(s)	1868, 2071
EcoNI	CCTNNNNNAGG	1 cut(s)	744
EcoO109I	RGGNCCY	1 cut(s)	910
EcoRI	GAATTC	2 cut(s)	933, 1109
EcoRII	CCWGG	2 cut(s)	37, 1834
EcoRV	GATATC	1 cut(s)	1939
EcoT14I	CCWWGG	9 cut(s)	464, 633, 898, 904, 913, 1070, 1140, 1485, 1780
EcoT38I	GRGCYC	3 cut(s)	1870, 2064, 2073
EgeI	GGCGCC	1 cut(s)	445
EheI	GGCGCC	1 cut(s)	445
ErhI	CCWWGG	9 cut(s)	464, 633, 898, 904, 913, 1070, 1140, 1485, 1780
FalI	AAGNNNNNCTT	4 cut(s)	1032, 1064, 1937, 1969
FaqI	GGGAC	4 cut(s)	771, 923, 1365, 2058
FauI	CCCGC	5 cut(s)	69, 138, 424, 1342, 2007
FblI	GTMKAC	4 cut(s)	389, 864, 1294, 1546
FokI	GGATG	1 cut(s)	695
FriOI	GRGCYC	3 cut(s)	1870, 2064, 2073
FspBI	CTAG	8 cut(s)	14, 593, 905, 1007, 1071, 1454, 1542, 2144
GlaI	GCGC	3 cut(s)	357, 440, 445
GsuI	CTGGAG	2 cut(s)	140, 1617
HaeII	RGCGCY	1 cut(s)	447
HapII	CCGG	9 cut(s)	147, 385, 771, 998, 1248, 1341, 1511, 1978, 2129
HgaI	GACGC	3 cut(s)	32, 299, 357
HhaI	GCGC	3 cut(s)	358, 441, 446
Hin1I	GRCGYC	4 cut(s)	24, 310, 444, 784
Hin6I	GCGC	3 cut(s)	356, 439, 444
HinP1I	GCGC	3 cut(s)	356, 439, 444
HincII	GTYRAC	4 cut(s)	390, 495, 1295, 1777
HindII	GTYRAC	4 cut(s)	390, 495, 1295, 1777
HinfI	GANTC	7 cut(s)	360, 412, 578, 693, 1643, 1649, 2110
HpaII	CCGG	9 cut(s)	147, 385, 771, 998, 1248, 1341, 1511, 1978, 2129
HphI	GGTGA	2 cut(s)	1418, 1745
Hpy166II	GTNNAC	9 cut(s)	124, 390, 495, 865, 1295, 1547, 1777, 2134, 2149
Hpy188I	TCNGA	7 cut(s)	139, 285, 939, 1648, 1882, 1906, 2053
Hpy8I	GTNNAC	9 cut(s)	124, 390, 495, 865, 1295, 1547, 1777, 2134, 2149
Hpy99I	CGWCG	5 cut(s)	26, 315, 373, 394, 409
HpyAV	CCTTC	6 cut(s)	91, 300, 343, 1073, 1558, 1939
HpyCH4III	ACNGT	8 cut(s)	108, 745, 1046, 1279, 1299, 1406, 1990, 2098
HpyCH4IV	ACGT	4 cut(s)	784, 1132, 1220, 1932
HpyF3I	CTNAG	4 cut(s)	606, 858, 1529, 1861
HpySE526I	ACGT	4 cut(s)	784, 1132, 1220, 1932
Hsp92I	GRCGYC	4 cut(s)	24, 310, 444, 784
HspAI	GCGC	3 cut(s)	356, 439, 444
KasI	GGCGCC	1 cut(s)	443
Kpn2I	TCCGGA	1 cut(s)	1977
Kzo9I	GATC	6 cut(s)	280, 460, 505, 648, 837, 1480
LmnI	GCTCC	7 cut(s)	159, 727, 1337, 1514, 1538, 1850, 1865
LweI	GCATC	3 cut(s)	1705, 1749, 1959
MaeI	CTAG	8 cut(s)	14, 593, 905, 1007, 1071, 1454, 1542, 2144
MaeII	ACGT	4 cut(s)	784, 1132, 1220, 1932
MaeIII	GTNAC	2 cut(s)	1304, 1456
MalI	GATC	6 cut(s)	282, 462, 507, 650, 839, 1482
MboI	GATC	6 cut(s)	280, 460, 505, 648, 837, 1480
MboII	GAAGA	6 cut(s)	82, 1052, 1097, 1118, 1724, 2042
MfeI	CAATTG	2 cut(s)	1098, 1518
MflI	RGATCY	1 cut(s)	648
MhlI	GDGCHC	4 cut(s)	1855, 1870, 2064, 2073
MlsI	TGGCCA	2 cut(s)	99, 850
MluNI	TGGCCA	2 cut(s)	99, 850
Mly113I	GGCGCC	1 cut(s)	444
MlyI	GAGTC	3 cut(s)	587, 702, 2119
MmeI	TCCRAC	2 cut(s)	1056, 1709
Mox20I	TGGCCA	2 cut(s)	99, 850
MroI	TCCGGA	1 cut(s)	1977
MroXI	GAANNNNTTC	1 cut(s)	1122
MscI	TGGCCA	2 cut(s)	99, 850
MseI	TTAA	7 cut(s)	471, 653, 978, 1365, 1560, 1629, 1722
MslI	CAYNNNNRTG	2 cut(s)	1731, 2078
Msp20I	TGGCCA	2 cut(s)	99, 850
MspA1I	CMGCKG	4 cut(s)	64, 195, 971, 2021
MspI	CCGG	9 cut(s)	147, 385, 771, 998, 1248, 1341, 1511, 1978, 2129
MspR9I	CCNGG	5 cut(s)	39, 147, 1512, 1836, 2129
MteI	GCGCNGCGC	1 cut(s)	442
MunI	CAATTG	2 cut(s)	1098, 1518
Mva1269I	GAATGC	3 cut(s)	1699, 1706, 1913
MvaI	CCWGG	2 cut(s)	39, 1836
MvnI	CGCG	6 cut(s)	120, 358, 368, 373, 441, 522
NarI	GGCGCC	1 cut(s)	444
NciI	CCSGG	3 cut(s)	147, 1512, 2129
NcoI	CCATGG	2 cut(s)	464, 1485
NdeII	GATC	6 cut(s)	280, 460, 505, 648, 837, 1480
NlaIV	GGNNCC	6 cut(s)	335, 445, 911, 1339, 2062, 2126
NmuCI	GTSAC	1 cut(s)	1304
NspI	RCATGY	4 cut(s)	1730, 1825, 1891, 2083
PaeI	GCATGC	1 cut(s)	1730
PagI	TCATGA	2 cut(s)	1618, 2073
PciI	ACATGT	2 cut(s)	1821, 2079
PctI	GAATGC	3 cut(s)	1699, 1706, 1913
PdmI	GAANNNNTTC	1 cut(s)	1122
PfeI	GAWTC	4 cut(s)	360, 412, 1643, 1649
PflMI	CCANNNNNTGG	1 cut(s)	1841
PinAI	ACCGGT	1 cut(s)	997
PleI	GAGTC	3 cut(s)	586, 701, 2118
PluTI	GGCGCC	1 cut(s)	447
PpsI	GAGTC	3 cut(s)	586, 701, 2118
PpuMI	RGGWCCY	1 cut(s)	910
PscI	ACATGT	2 cut(s)	1821, 2079
PshBI	ATTAAT	1 cut(s)	978
Psp124BI	GAGCTC	2 cut(s)	1870, 2073
Psp5II	RGGWCCY	1 cut(s)	910
Psp6I	CCWGG	2 cut(s)	37, 1834
PspGI	CCWGG	2 cut(s)	37, 1834
PspN4I	GGNNCC	6 cut(s)	335, 445, 911, 1339, 2062, 2126
PspOMI	GGGCCC	1 cut(s)	2060
PspPI	GGNCC	6 cut(s)	334, 610, 910, 1137, 2060, 2061
PspPPI	RGGWCCY	1 cut(s)	910
PstI	CTGCAG	1 cut(s)	970
PstNI	CAGNNNCTG	1 cut(s)	1904
PsuI	RGATCY	1 cut(s)	648
PvuII	CAGCTG	2 cut(s)	971, 2021
RsaI	GTAC	7 cut(s)	123, 686, 1018, 1091, 1377, 1626, 1958
RsaNI	GTAC	7 cut(s)	122, 685, 1017, 1090, 1376, 1625, 1957
RseI	CAYNNNNRTG	2 cut(s)	1731, 2078
SacI	GAGCTC	2 cut(s)	1870, 2073
SalI	GTCGAC	2 cut(s)	388, 1293
SaqAI	TTAA	7 cut(s)	471, 653, 978, 1365, 1560, 1629, 1722
Sau3AI	GATC	6 cut(s)	280, 460, 505, 648, 837, 1480
Sau96I	GGNCC	6 cut(s)	334, 610, 910, 1137, 2060, 2061
SchI	GAGTC	3 cut(s)	587, 702, 2119
ScrFI	CCNGG	5 cut(s)	39, 147, 1512, 1836, 2129
SduI	GDGCHC	4 cut(s)	1855, 1870, 2064, 2073
SfaNI	GCATC	3 cut(s)	1705, 1749, 1959
SfcI	CTRYAG	2 cut(s)	741, 966
SfoI	GGCGCC	1 cut(s)	445
SinI	GGWCC	2 cut(s)	334, 910
SmiMI	CAYNNNNRTG	2 cut(s)	1731, 2078
SphI	GCATGC	1 cut(s)	1730
SspDI	GGCGCC	1 cut(s)	443
SspMI	CTAG	8 cut(s)	14, 593, 905, 1007, 1071, 1454, 1542, 2144
SstI	GAGCTC	2 cut(s)	1870, 2073
StyD4I	CCNGG	5 cut(s)	37, 145, 1510, 1834, 2127
StyI	CCWWGG	9 cut(s)	464, 633, 898, 904, 913, 1070, 1140, 1485, 1780
TaaI	ACNGT	8 cut(s)	108, 745, 1046, 1279, 1299, 1406, 1990, 2098
TaiI	ACGT	4 cut(s)	787, 1135, 1223, 1935
TaqI	TCGA	7 cut(s)	244, 389, 404, 508, 552, 1063, 1294
TatI	WGTACW	3 cut(s)	684, 1089, 1375
TauI	GCSGC	4 cut(s)	20, 198, 368, 444
TfiI	GAWTC	4 cut(s)	360, 412, 1643, 1649
Tru1I	TTAA	7 cut(s)	471, 653, 978, 1365, 1560, 1629, 1722
Tru9I	TTAA	7 cut(s)	471, 653, 978, 1365, 1560, 1629, 1722
TscAI	CASTG	4 cut(s)	487, 811, 1197, 1711
TseFI	GTSAC	1 cut(s)	1304
Tsp45I	GTSAC	1 cut(s)	1304
TspDTI	ATGAA	7 cut(s)	562, 1102, 1115, 1187, 1706, 1908, 2090
TspGWI	ACGGA	3 cut(s)	83, 480, 1803
TspRI	CASTG	4 cut(s)	487, 811, 1197, 1711
Van91I	CCANNNNNTGG	1 cut(s)	1841
VpaK11BI	GGWCC	2 cut(s)	334, 910
VspI	ATTAAT	1 cut(s)	978
XagI	CCTNNNNNAGG	1 cut(s)	744
XapI	RAATTY	3 cut(s)	248, 933, 1109
XceI	RCATGY	4 cut(s)	1730, 1825, 1891, 2083
XmaJI	CCTAGG	2 cut(s)	904, 1070
XmiI	GTMKAC	4 cut(s)	389, 864, 1294, 1546
XmnI	GAANNNNTTC	1 cut(s)	1122
XspI	CTAG	8 cut(s)	14, 593, 905, 1007, 1071, 1454, 1542, 2144
ZraI	GACGTC	1 cut(s)	785

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.