Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0013057

Physical Location & Seq

Genomic Coordinates Forward (+)

46632586 .. 46639792

Gene Structure 7207 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ57902

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1824 bp

ATGTGGTGGAAGGTGTCGCGATTCGCCGCCGCGTCGCGGCTGAGCCGATCGACGAGGCCGTTGTCGACGGCGATCCCCGGTCCTTGTATTGTTCACAAACGCGGCGCTGATATTCTCCACGATCCCTGGTTCAACAAGCAGGACACTGGATTTCCTCTCACTGAAAGAGATCGATTAGGACTTCGCGGTTTACTCCCACCGCGTGTCATATCTTTCGAGCAGCAGTATGCTCGTTTCATGGAGTCGTATCGGTCGCTAGAGAAAAATACTGTGGGACAACCAGAAGGTGTTGTTGCCTTGGCAAAGTGGAGGATCTTAAATAGACTGCATGACAGGAATGAGACTTTATACTACCGAGTTCTTATAGATAACATACAGGACTTTGCTCCTGTCATATACACTCCTACAGTAGGATTAGTGTGCCAAAATTATTCAGGGTTATTTAGACGCCCGCGCGGAATGTATTTCAGTGCAAAGGACAAAGGGGAGATGATGTCTATGATCTACAATTGGCCTGCTGATCAGGTAGAAATGATAGTCATTACAGATGGCAGTCGTATTCTTGGCCTAGGTGACCTTGGAGTTCAGGGAATTGGAATACCAATAGGAAAACTTGATATGTATGTTGCTGCAGCTGGTATTAATCCACAGAAAATACTGCCGGTTATGCTTGATGTTGGTACTAACAATGAAAAGCTACTGAAAGACCGTCTTTATTTAGGACTTCGACAACCTAGGTTGGAAGGAGAAGAGTACATATCAATTGTTGATGAGTTCATGGAAGCCGTTCATAGACGTTGGCCCAAGGCCATTGTGCAGTTTGAGGATTTTCAAATGAAGTGGGCTTTTGAAACACTGCAACGTTACCGTAAAAGGTTTTGCACATTCAATGATGATATACAGGGAACTGCTGGTGTTGCACTTGCAGGACTACTAGGAACTGTAAGAGCCCAAGGTCGACCACTGGCAGACATTGTGAACCAAAAGATAGTTGTTGTGGGAGCTGGAAGTGCTGGACTTGGTGTTCTTAGCATGGCTGTACAGGCTGTTTTAAGAATAGCAGAAAACAGTGGAGCGGCTGCCAAAAATCCTTTTTTTCTTCTTGATAAAGATGGTCTAGTCACAAAAGAGAGGAAAAATCTTGATCCAATGGCTGCACCCTTTGCAAGAGATCCTGCAGAGATTGAAGGGCTTAGGGAGGGAGCTAGTCTACTTGAAGTGGTTAAAAAGCTCAAGCCCCATGTGCTTCTTGGTTTGTCAGGAGTCGGTGGTGTCTTCAGTGAGGAGGTGCTTAAAGCAATGCGAGAATCTGATTCAATCAAACCTGCCATTTTTGCGATGTCAAATCCAACCATGAATGCTGAATGCACTGCTGAAGATGCCTTTAAGCATGCTGGTGAAAACATAGTCTTTGGAAGTGGAAGCCCCTTTAAGAATGTTGATCTGGGCAATGGAAAAGTAGGCCATGTAAATCAAGCAAATAACATGTACCTGTTTCCAGGGATTGGTTTAGGAGCACTTCTTTCAGGTGCTCGTTTGATATCTGATGGCATGTTGCAAGCAGCATCTGAATGCCTTGCTTCATATATGACAGATGAAGATATCCGAAAGGGCATCTTATATCCATCTATTGATTGTATTCGAGATATTACAGCTGAGGTGGGAGCTGCTGTTGTGCGTGCCGCTGTTGCAGAAGAACTGGCTGAAGGACATTGTGAAGTGGGGCCCAGAGAGCTGTTGCACATGTCAAAAGAGGATACTGTGGAATATGTGACTCGCAATATGTGGTTCCCTATTTACAGCCCTCTTGTTCATGAAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004470 GO:0004471 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0006082 GO:0006090 GO:0006108 GO:0008144 GO:0008150 GO:0008152 GO:0008270 GO:0009507 GO:0009536 GO:0009987 GO:0016491 GO:0016614 GO:0016615 GO:0016616 GO:0017076 GO:0019752 GO:0030554 GO:0031974 GO:0032553 GO:0032555 GO:0032559 GO:0032787 GO:0035639 GO:0036094 GO:0042802 GO:0042803 GO:0043167 GO:0043168 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043436 GO:0043648 GO:0044237 GO:0044281 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046872 GO:0046914 GO:0046983 GO:0050897 GO:0055114 GO:0070013 GO:0071704 GO:0097159 GO:0097367 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00620 ko00710 ko01100 ko01120 ko01200 map00620 map00710 map01100 map01120 map01200

Pfam Domains

Protein Families

Malic_M malic

Protein Analysis

607

Amino Acids

67.1

Weight (kDa)

6.82

Isoelectric Point (pI)

33.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
malic	PF00390	110 - 290	3.2e-76	Malic enzyme, N-terminal domain
Malic_M	PF03949	300 - 563	3e-88	Malic enzyme, NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0013057)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G00570
fragaria_vesca	FvH4_7g13590
malus_domestica	MD01G1052400.v1.1 MD07G1129000.v1.1
prunus_persica	Prupe.2G160000_v2.0.a1 Prupe.2G160000_v2.0.a1 Prupe.2G160000_v2.0.a1
pyrus_communis	pycom01g07810 pycom07g12470
rosa_chinensis	RchiOBHm_Chr1g0353381
rosa_laevigata	RLG00000028273
rosa_multiflora	Rmu_sc0001207.1_g000013
rosa_roxburghii	Rroxscaffold_4G00301880
rosa_rugosa	Rorug01G0235600
rosa_samantha	Rh1AG247800 Rh1BG217600 Rh1CG231500
rosa_wichuraiana	Rw1G021590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1333
AccB7I	CCANNNNNTGG	1 cut(s)	1505
AccBSI	CCGCTC	1 cut(s)	1076
AccI	GTMKAC	3 cut(s)	65, 958, 1210
AccII	CGCG	8 cut(s)	19, 32, 37, 102, 186, 202, 454, 456
AclI	AACGTT	1 cut(s)	862
AclWI	GGATC	5 cut(s)	67, 116, 320, 1139, 1166
AcuI	CTGAAG	3 cut(s)	1261, 1395, 1725
AcyI	GRCGYC	1 cut(s)	448
AdeI	CACNNNGTG	1 cut(s)	203
AfaI	GTAC	4 cut(s)	682, 755, 1041, 1490
AfiI	CCNNNNNNNGG	3 cut(s)	36, 410, 1505
AflIII	ACRYGT	2 cut(s)	1485, 1743
AgsI	TTSAA	7 cut(s)	133, 833, 851, 889, 1187, 1217, 1317
AjnI	CCWGG	2 cut(s)	125, 1498
AloI	GAACNNNNNNTCC	2 cut(s)	1008, 1040
AluBI	AGCT	8 cut(s)	635, 697, 1004, 1205, 1231, 1655, 1667, 1735
AluI	AGCT	8 cut(s)	635, 697, 1004, 1205, 1231, 1655, 1667, 1735
Alw21I	GWGCWC	2 cut(s)	1519, 1534
Alw26I	GTCTC	1 cut(s)	335
AlwI	GGATC	5 cut(s)	67, 116, 320, 1139, 1166
AlwNI	CAGNNNCTG	1 cut(s)	1568
AoxI	GGCC	7 cut(s)	56, 512, 565, 800, 807, 1462, 1724
ApaI	GGGCCC	1 cut(s)	1728
ApeKI	GCWGC	7 cut(s)	220, 629, 632, 1079, 1154, 1562, 1667
AseI	ATTAAT	1 cut(s)	642
Asp700I	GAANNNNTTC	1 cut(s)	786
AspA2I	CCTAGG	2 cut(s)	568, 734
AspLEI	GCGC	2 cut(s)	107, 456
AspS9I	GGNCC	4 cut(s)	80, 801, 1724, 1725
AsuC2I	CCSGG	1 cut(s)	78
AsuHPI	GGTGA	2 cut(s)	584, 1409
AvaII	GGWCC	1 cut(s)	80
AvrII	CCTAGG	2 cut(s)	568, 734
BaeGI	GKGCMC	1 cut(s)	1728
BanII	GRGCYC	2 cut(s)	952, 1728
BbsI	GAAGAC	1 cut(s)	1267
Bbv12I	GWGCWC	2 cut(s)	1519, 1534
BbvCI	CCTCAGC	1 cut(s)	1656
BbvI	GCAGC	7 cut(s)	232, 616, 644, 1066, 1141, 1574, 1654
BccI	CCATC	4 cut(s)	542, 1106, 1541, 1633
BceAI	ACGGC	3 cut(s)	43, 84, 770
BcgI	CGANNNNNNTGC	2 cut(s)	212, 246
BciT130I	CCWGG	2 cut(s)	127, 1500
BciVI	GTATCC	1 cut(s)	1750
BclI	TGATCA	1 cut(s)	520
BcnI	CCSGG	1 cut(s)	78
BcoDI	GTCTC	1 cut(s)	335
BfaI	CTAG	6 cut(s)	257, 569, 735, 935, 1118, 1206
BfmI	CTRYAG	3 cut(s)	405, 630, 1176
BfoI	RGCGCY	1 cut(s)	108
BfuAI	ACCTGC	1 cut(s)	1333
BfuI	GTATCC	1 cut(s)	1750
BlnI	CCTAGG	2 cut(s)	568, 734
BlpI	GCTNAGC	1 cut(s)	41
Bme1390I	CCNGG	3 cut(s)	78, 127, 1500
Bme18I	GGWCC	1 cut(s)	80
BmgT120I	GGNCC	4 cut(s)	80, 801, 1724, 1725
BmiI	GGNNCC	3 cut(s)	1725, 1726, 1790
BmrFI	CCNGG	3 cut(s)	78, 127, 1500
BmsI	GCATC	3 cut(s)	1369, 1574, 1623
BpiI	GAAGAC	1 cut(s)	1267
Bpu10I	CCTNAGC	2 cut(s)	1193, 1656
Bpu1102I	GCTNAGC	1 cut(s)	41
BpuEI	CTTGAG	1 cut(s)	1217
BpuMI	CCSGG	1 cut(s)	78
Bsa29I	ATCGAT	1 cut(s)	172
BsaHI	GRCGYC	1 cut(s)	448
BsaJI	CCNNGG	9 cut(s)	76, 125, 297, 568, 577, 734, 804, 952, 1499
BsaXI	ACNNNNNCTCC	4 cut(s)	479, 509, 1656, 1686
Bsc4I	CCNNNNNNNGG	3 cut(s)	36, 410, 1505
Bse118I	RCCGGY	1 cut(s)	661
Bse1I	ACTGG	3 cut(s)	151, 969, 1704
Bse3DI	GCAATG	2 cut(s)	1305, 1456
BseBI	CCWGG	2 cut(s)	127, 1500
BseCI	ATCGAT	1 cut(s)	172
BseDI	CCNNGG	9 cut(s)	76, 125, 297, 568, 577, 734, 804, 952, 1499
BseLI	CCNNNNNNNGG	3 cut(s)	36, 410, 1505
BseMI	GCAATG	2 cut(s)	1305, 1456
BseMII	CTCAG	2 cut(s)	32, 1647
BseNI	ACTGG	3 cut(s)	151, 969, 1704
BseRI	GAGGAG	1 cut(s)	1298
BseSI	GKGCMC	1 cut(s)	1728
BseXI	GCAGC	7 cut(s)	232, 616, 644, 1066, 1141, 1574, 1654
BsgI	GTGCAG	2 cut(s)	836, 1140
Bsh1236I	CGCG	8 cut(s)	19, 32, 37, 102, 186, 202, 454, 456
Bsh1285I	CGRYCG	2 cut(s)	50, 254
BshFI	GGCC	7 cut(s)	58, 514, 567, 802, 809, 1464, 1726
BshVI	ATCGAT	1 cut(s)	172
BsiEI	CGRYCG	2 cut(s)	50, 254
BsiHKAI	GWGCWC	2 cut(s)	1519, 1534
BsiSI	CCGG	2 cut(s)	78, 662
BslFI	GGGAC	1 cut(s)	288
BslI	CCNNNNNNNGG	3 cut(s)	36, 410, 1505
BsmAI	GTCTC	1 cut(s)	335
BsmFI	GGGAC	1 cut(s)	288
BsmI	GAATGC	3 cut(s)	1363, 1370, 1577
BsnI	GGCC	7 cut(s)	58, 514, 567, 802, 809, 1464, 1726
Bsp120I	GGGCCC	1 cut(s)	1724
Bsp1286I	GDGCHC	4 cut(s)	952, 1519, 1534, 1728
Bsp1407I	TGTACA	1 cut(s)	1039
Bsp1720I	GCTNAGC	1 cut(s)	41
Bsp68I	TCGCGA	1 cut(s)	19
BspANI	GGCC	7 cut(s)	58, 514, 567, 802, 809, 1464, 1726
BspCNI	CTCAG	2 cut(s)	33, 1648
BspDI	ATCGAT	1 cut(s)	172
BspFNI	CGCG	8 cut(s)	19, 32, 37, 102, 186, 202, 454, 456
BspHI	TCATGA	1 cut(s)	1813
BspLI	GGNNCC	3 cut(s)	1725, 1726, 1790
BspMAI	CTGCAG	2 cut(s)	634, 1180
BspMI	ACCTGC	1 cut(s)	1333
BspPI	GGATC	5 cut(s)	67, 116, 320, 1139, 1166
BsrBI	CCGCTC	1 cut(s)	1076
BsrDI	GCAATG	2 cut(s)	1305, 1456
BsrFI	RCCGGY	1 cut(s)	661
BsrGI	TGTACA	1 cut(s)	1039
BsrI	ACTGG	3 cut(s)	151, 969, 1704
BssAI	RCCGGY	1 cut(s)	661
BssECI	CCNNGG	9 cut(s)	76, 125, 297, 568, 577, 734, 804, 952, 1499
BssNI	GRCGYC	1 cut(s)	448
BssT1I	CCWWGG	6 cut(s)	297, 568, 577, 734, 804, 952
Bst2UI	CCWGG	2 cut(s)	127, 1500
Bst4CI	ACNGT	7 cut(s)	271, 409, 710, 869, 943, 1070, 1762
Bst6I	CTCTTC	1 cut(s)	744
BstACI	GRCGYC	1 cut(s)	448
BstAPI	GCANNNNNTGC	1 cut(s)	1163
BstAUI	TGTACA	1 cut(s)	1039
BstC8I	GCNNGC	5 cut(s)	452, 516, 1392, 1560, 1680
BstDEI	CTNAG	4 cut(s)	41, 1028, 1193, 1656
BstEII	GGTNACC	1 cut(s)	572
BstENI	CCTNNNNNAGG	1 cut(s)	408
BstFNI	CGCG	8 cut(s)	19, 32, 37, 102, 186, 202, 454, 456
BstH2I	RGCGCY	1 cut(s)	108
BstHHI	GCGC	2 cut(s)	107, 456
BstMAI	GTCTC	1 cut(s)	335
BstMCI	CGRYCG	2 cut(s)	50, 254
BstNI	CCWGG	2 cut(s)	127, 1500
BstNSI	RCATGY	4 cut(s)	1394, 1489, 1555, 1747
BstPI	GGTNACC	1 cut(s)	572
BstSCI	CCNGG	3 cut(s)	76, 125, 1498
BstSFI	CTRYAG	3 cut(s)	405, 630, 1176
BstSLI	GKGCMC	1 cut(s)	1728
BstUI	CGCG	8 cut(s)	19, 32, 37, 102, 186, 202, 454, 456
BstV1I	GCAGC	7 cut(s)	232, 616, 644, 1066, 1141, 1574, 1654
BstV2I	GAAGAC	1 cut(s)	1267
BstX2I	RGATCY	2 cut(s)	312, 1171
BstYI	RGATCY	2 cut(s)	312, 1171
Bsu15I	ATCGAT	1 cut(s)	172
BsuI	GTATCC	1 cut(s)	1750
BsuRI	GGCC	7 cut(s)	58, 514, 567, 802, 809, 1464, 1726
BsuTUI	ATCGAT	1 cut(s)	172
BtgZI	GCGATG	1 cut(s)	1352
BtsI	GCAGTG	2 cut(s)	854, 1368
BtsIMutI	CAGTG	8 cut(s)	144, 159, 475, 854, 962, 1075, 1285, 1368
BtuMI	TCGCGA	1 cut(s)	19
BveI	ACCTGC	1 cut(s)	1333
Cac8I	GCNNGC	5 cut(s)	452, 516, 1392, 1560, 1680
CaiI	CAGNNNCTG	1 cut(s)	1568
CciI	TCATGA	1 cut(s)	1813
CfoI	GCGC	2 cut(s)	107, 456
Cfr10I	RCCGGY	1 cut(s)	661
Cfr13I	GGNCC	4 cut(s)	80, 801, 1724, 1725
ClaI	ATCGAT	1 cut(s)	172
CseI	GACGC	2 cut(s)	21, 456
Csp6I	GTAC	4 cut(s)	681, 754, 1040, 1489
CspCI	CAANNNNNGTGG	2 cut(s)	821, 856
CviQI	GTAC	4 cut(s)	681, 754, 1040, 1489
DdeI	CTNAG	4 cut(s)	41, 1028, 1193, 1656
DraIII	CACNNNGTG	1 cut(s)	203
Eam1104I	CTCTTC	1 cut(s)	744
EarI	CTCTTC	1 cut(s)	744
Eco130I	CCWWGG	6 cut(s)	297, 568, 577, 734, 804, 952
Eco24I	GRGCYC	2 cut(s)	952, 1728
Eco32I	GATATC	2 cut(s)	1542, 1603
Eco47I	GGWCC	1 cut(s)	80
Eco57I	CTGAAG	3 cut(s)	1261, 1395, 1725
Eco91I	GGTNACC	1 cut(s)	572
EcoNI	CCTNNNNNAGG	1 cut(s)	408
EcoO109I	RGGNCCY	1 cut(s)	1724
EcoO65I	GGTNACC	1 cut(s)	572
EcoRII	CCWGG	2 cut(s)	125, 1498
EcoRV	GATATC	2 cut(s)	1542, 1603
EcoT14I	CCWWGG	6 cut(s)	297, 568, 577, 734, 804, 952
EcoT38I	GRGCYC	2 cut(s)	952, 1728
ErhI	CCWWGG	6 cut(s)	297, 568, 577, 734, 804, 952
FalI	AAGNNNNNCTT	4 cut(s)	696, 728, 1601, 1633
FaqI	GGGAC	1 cut(s)	288
FauI	CCCGC	1 cut(s)	459
FbaI	TGATCA	1 cut(s)	520
FblI	GTMKAC	3 cut(s)	65, 958, 1210
FriOI	GRGCYC	2 cut(s)	952, 1728
FspBI	CTAG	6 cut(s)	257, 569, 735, 935, 1118, 1206
GlaI	GCGC	2 cut(s)	106, 455
HaeII	RGCGCY	1 cut(s)	108
HaeIII	GGCC	7 cut(s)	58, 514, 567, 802, 809, 1464, 1726
HapII	CCGG	2 cut(s)	78, 662
HgaI	GACGC	2 cut(s)	21, 456
HhaI	GCGC	2 cut(s)	107, 456
Hin1I	GRCGYC	1 cut(s)	448
Hin6I	GCGC	2 cut(s)	105, 454
HinP1I	GCGC	2 cut(s)	105, 454
HincII	GTYRAC	2 cut(s)	66, 959
HindII	GTYRAC	2 cut(s)	66, 959
HinfI	GANTC	6 cut(s)	21, 242, 1263, 1307, 1313, 1774
HpaII	CCGG	2 cut(s)	78, 662
HphI	GGTGA	2 cut(s)	584, 1409
Hpy166II	GTNNAC	6 cut(s)	66, 94, 191, 959, 979, 1211
Hpy188I	TCNGA	4 cut(s)	1312, 1546, 1570, 1607
Hpy188III	TCNNGA	6 cut(s)	18, 1103, 1142, 1260, 1643, 1814
Hpy8I	GTNNAC	6 cut(s)	66, 94, 191, 959, 979, 1211
Hpy99I	CGWCG	3 cut(s)	37, 55, 70
HpyAV	CCTTC	5 cut(s)	4, 278, 737, 1181, 1700
HpyCH4III	ACNGT	7 cut(s)	271, 409, 710, 869, 943, 1070, 1762
HpyCH4IV	ACGT	2 cut(s)	796, 862
HpyF3I	CTNAG	4 cut(s)	41, 1028, 1193, 1656
HpySE526I	ACGT	2 cut(s)	796, 862
Hsp92I	GRCGYC	1 cut(s)	448
HspAI	GCGC	2 cut(s)	105, 454
Ksp22I	TGATCA	1 cut(s)	520
LmnI	GCTCC	6 cut(s)	391, 1001, 1073, 1202, 1514, 1664
Lsp1109I	GCAGC	7 cut(s)	232, 616, 644, 1066, 1141, 1574, 1654
LweI	GCATC	3 cut(s)	1369, 1574, 1623
MaeI	CTAG	6 cut(s)	257, 569, 735, 935, 1118, 1206
MaeII	ACGT	2 cut(s)	796, 862
MaeIII	GTNAC	4 cut(s)	572, 863, 1120, 1771
MbiI	CCGCTC	1 cut(s)	1076
MboII	GAAGA	6 cut(s)	761, 1091, 1267, 1388, 1610, 1706
MfeI	CAATTG	2 cut(s)	508, 762
MflI	RGATCY	2 cut(s)	312, 1171
MhlI	GDGCHC	4 cut(s)	952, 1519, 1534, 1728
MluCI	AATT	4 cut(s)	427, 508, 591, 762
MlyI	GAGTC	3 cut(s)	251, 1272, 1768
MmeI	TCCRAC	2 cut(s)	720, 1373
MroXI	GAANNNNTTC	1 cut(s)	786
MseI	TTAA	7 cut(s)	317, 642, 1052, 1224, 1293, 1386, 1431
MslI	CAYNNNNRTG	2 cut(s)	1395, 1570
MspA1I	CMGCKG	3 cut(s)	635, 1655, 1685
MspI	CCGG	2 cut(s)	78, 662
MspR9I	CCNGG	3 cut(s)	78, 127, 1500
MunI	CAATTG	2 cut(s)	508, 762
Mva1269I	GAATGC	3 cut(s)	1363, 1370, 1577
MvaI	CCWGG	2 cut(s)	127, 1500
MvnI	CGCG	8 cut(s)	19, 32, 37, 102, 186, 202, 454, 456
NciI	CCSGG	1 cut(s)	78
NlaIV	GGNNCC	3 cut(s)	1725, 1726, 1790
NmuCI	GTSAC	3 cut(s)	572, 1120, 1771
NruI	TCGCGA	1 cut(s)	19
NspI	RCATGY	4 cut(s)	1394, 1489, 1555, 1747
PaeI	GCATGC	1 cut(s)	1394
PagI	TCATGA	1 cut(s)	1813
PciI	ACATGT	2 cut(s)	1485, 1743
PcsI	WCGNNNNNNNCGW	1 cut(s)	56
PctI	GAATGC	3 cut(s)	1363, 1370, 1577
PdmI	GAANNNNTTC	1 cut(s)	786
PfeI	GAWTC	3 cut(s)	21, 1307, 1313
PflMI	CCANNNNNTGG	1 cut(s)	1505
Ple19I	CGATCG	1 cut(s)	50
PleI	GAGTC	3 cut(s)	250, 1271, 1768
PpsI	GAGTC	3 cut(s)	250, 1271, 1768
PscI	ACATGT	2 cut(s)	1485, 1743
PshBI	ATTAAT	1 cut(s)	642
Psp1406I	AACGTT	1 cut(s)	862
Psp6I	CCWGG	2 cut(s)	125, 1498
PspEI	GGTNACC	1 cut(s)	572
PspGI	CCWGG	2 cut(s)	125, 1498
PspN4I	GGNNCC	3 cut(s)	1725, 1726, 1790
PspOMI	GGGCCC	1 cut(s)	1724
PspPI	GGNCC	4 cut(s)	80, 801, 1724, 1725
PstI	CTGCAG	2 cut(s)	634, 1180
PstNI	CAGNNNCTG	1 cut(s)	1568
PsuI	RGATCY	2 cut(s)	312, 1171
PvuI	CGATCG	1 cut(s)	50
PvuII	CAGCTG	2 cut(s)	635, 1655
RruI	TCGCGA	1 cut(s)	19
RsaI	GTAC	4 cut(s)	682, 755, 1041, 1490
RsaNI	GTAC	4 cut(s)	681, 754, 1040, 1489
RseI	CAYNNNNRTG	2 cut(s)	1395, 1570
SalI	GTCGAC	2 cut(s)	64, 957
SaqAI	TTAA	7 cut(s)	317, 642, 1052, 1224, 1293, 1386, 1431
Sau96I	GGNCC	4 cut(s)	80, 801, 1724, 1725
SchI	GAGTC	3 cut(s)	251, 1272, 1768
ScrFI	CCNGG	3 cut(s)	78, 127, 1500
SduI	GDGCHC	4 cut(s)	952, 1519, 1534, 1728
SfaNI	GCATC	3 cut(s)	1369, 1574, 1623
SfcI	CTRYAG	3 cut(s)	405, 630, 1176
SinI	GGWCC	1 cut(s)	80
SmiMI	CAYNNNNRTG	2 cut(s)	1395, 1570
SmlI	CTYRAG	1 cut(s)	1232
SmoI	CTYRAG	1 cut(s)	1232
SphI	GCATGC	1 cut(s)	1394
Sse9I	AATT	4 cut(s)	427, 508, 591, 762
SspMI	CTAG	6 cut(s)	257, 569, 735, 935, 1118, 1206
StyD4I	CCNGG	3 cut(s)	76, 125, 1498
StyI	CCWWGG	6 cut(s)	297, 568, 577, 734, 804, 952
TaaI	ACNGT	7 cut(s)	271, 409, 710, 869, 943, 1070, 1762
TaiI	ACGT	2 cut(s)	799, 865
TaqI	TCGA	7 cut(s)	50, 65, 172, 216, 727, 958, 1642
TaqII	GACCGA	1 cut(s)	240
TasI	AATT	4 cut(s)	427, 508, 591, 762
TatI	WGTACW	2 cut(s)	753, 1039
TauI	GCSGC	6 cut(s)	29, 32, 40, 105, 1079, 1685
TfiI	GAWTC	3 cut(s)	21, 1307, 1313
Tru1I	TTAA	7 cut(s)	317, 642, 1052, 1224, 1293, 1386, 1431
Tru9I	TTAA	7 cut(s)	317, 642, 1052, 1224, 1293, 1386, 1431
TscAI	CASTG	8 cut(s)	151, 166, 475, 861, 969, 1075, 1285, 1375
TseFI	GTSAC	3 cut(s)	572, 1120, 1771
TseI	GCWGC	7 cut(s)	220, 629, 632, 1079, 1154, 1562, 1667
Tsp45I	GTSAC	3 cut(s)	572, 1120, 1771
TspDTI	ATGAA	9 cut(s)	226, 705, 766, 779, 851, 1370, 1572, 1611, 1802
TspRI	CASTG	8 cut(s)	151, 166, 475, 861, 969, 1075, 1285, 1375
Van91I	CCANNNNNTGG	1 cut(s)	1505
VpaK11BI	GGWCC	1 cut(s)	80
VspI	ATTAAT	1 cut(s)	642
XagI	CCTNNNNNAGG	1 cut(s)	408
XceI	RCATGY	4 cut(s)	1394, 1489, 1555, 1747
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1247
XmaJI	CCTAGG	2 cut(s)	568, 734
XmiI	GTMKAC	3 cut(s)	65, 958, 1210
XmnI	GAANNNNTTC	1 cut(s)	786
XspI	CTAG	6 cut(s)	257, 569, 735, 935, 1118, 1206

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.