Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0013057

Physical Location & Seq

Genomic Coordinates Reverse (-)

22226541 .. 22240438

Gene Structure 13898 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00301880.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1821 bp

ATGTGGTGGAAGGTGTCGCGATTCGCCGCCGCGTCGCGGCTGAGCCGATCGACGAGGCCGTTGTCGACGGCGATCCCTGGTCCTTGTATTGTTCACAAACGCGGCGCTGATATTCTCCACGATCCCTGGTTCAATAAGGACACTGGATTTCCTCTCACTGAAAGAGATCGATTAGGACTTCGCGGTTTACTCCCACCGCGTGTCATATCTTTCGAGCAGCAGTATGCTCGTTTCATGGAGTCGTATCGGTCGCTAGAGAAAAATACTGTGGGACAACCAGAAGGTGTTGTTGCCTTGGCAAAGTGGAGGATCTTAAATAGACTGCATGACAGGAATGAGACTTTGTACTACCGAGTTCTTATAGATAACATACAGGACTTTGCTCCTATCATATACACTCCTACAGTAGGATTAGTATGCCAAAATTATTCAGGGTTATTTAGACGCCCGCGCGGAATGTATTTCAGTGCAAAGGACAAAGGGGAGATGATGTCTATGATCTACAATTGGCCTGCTGATCAGGTAGAAATGATAGTCATTACAGATGGCAGTCGTATTCTTGGCCTAGGTGACCTTGGAGTTCAGGGAATTGGAATACCAATAGGAAAACTTGATATGTATGTTGCTGCAGCTGGTATTAATCCACAGAAAATACTGCCGGTTATGCTTGATGTTGGTACTAACAATGAAAGGCTACTGGAAGACCGTCTTTATTTAGGACTTCGACAACCTAGGTTGGAAGGAGAAGAGTACATATCAATTGTTGATGAGTTCATGGAAGCCGTTCATAGACGTTGGCCCAAGGCCATTGTGCAGTTTGAGGATTTTCAAATGAAGTGGGCTTTTGAAACGCTGCAACGTTACCGTAAAAGGTTTTGCACATTCAATGATGATATACAGGGAACTGCCGGTGTTGCACTTGCAGGACTACTAGGAACTGTAAGAGCCCAAGGTCGACCACTGGCAGACATTGTGAACCAAAAGATAGTTGTTGTGGGAGCTGGAAGTGCTGGACTTGGTGTTCTTAGCATGGCTGTACAGGCTGTTTTAAGAATAGCAGAAAACAGTGGAGCTGCTGCCAAAAATCCTTTTTTTCTTCTTGATAAAGATGGTCTAGTCACAAAAGAGAGGAAAAATCTTGATCCAATGGCTGCACCCTTTGCTAGAGATCCTGCAGAGATTGAAGGGCTTAGGGAGGGAGCTAGTCTACTTGAAGTGGTTAAAAAGCTCAAGCCCCATGTGCTTCTTGGTTTGTCAGGAGTCGGTGGTGTCTTCAGTGAGGAGGTGCTTAAAGCAATGCGAGAATCTGATTCAATCAAACCTGCCATTTTTGCGATGTCAAATCCAACCATGAATGCTGAATGCACTGCTGAAGATGCCTTTAAGCATGCTGGTGAAAACATAGTCTTTGGAAGTGGAAGCCCCTTTAAGAATGTTGATCTGGGCAATGGAAAAGTAGGCCATGTAAATCAAGCAAATAACATGTACCTCTTTCCAGGGATTGGTTTAGGAGCACTTCTTTCAGGTGCTCGTTTGATATCGGATGGCATGTTGCAAGCAGCATCTGAATGCCTTGCTTCATATATGACAGATGAAGATATCCGAAAGGGGATCTTATATCCATCTATTGATAGTATTCGAGATATTACAGCTGAGGTGGGAGCTGCTGTTGTGCGTGCGGCTGTTGCAGAAGAACTGGCTGAAGGACATTGCGAAGTGGGGCCCAGAGAGCTGTTGCACATGTCAAAAGAGGAGACTGTGGAATATGTGACTCGCAATATGTGGTTCCCTATTTACAGCCCTCTTGTTCATGAAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004470 GO:0004471 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0006082 GO:0006090 GO:0006108 GO:0008144 GO:0008150 GO:0008152 GO:0008270 GO:0009507 GO:0009536 GO:0009987 GO:0016491 GO:0016614 GO:0016615 GO:0016616 GO:0017076 GO:0019752 GO:0030554 GO:0031974 GO:0032553 GO:0032555 GO:0032559 GO:0032787 GO:0035639 GO:0036094 GO:0042802 GO:0042803 GO:0043167 GO:0043168 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043436 GO:0043648 GO:0044237 GO:0044281 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046872 GO:0046914 GO:0046983 GO:0050897 GO:0055114 GO:0070013 GO:0071704 GO:0097159 GO:0097367 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00620 ko00710 ko01100 ko01120 ko01200 map00620 map00710 map01100 map01120 map01200

Pfam Domains

Protein Families

Malic_M malic

Protein Analysis

606

Amino Acids

67.02

Weight (kDa)

6.42

Isoelectric Point (pI)

34.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
malic	PF00390	109 - 289	3.9e-76	Malic enzyme, N-terminal domain
Malic_M	PF03949	299 - 562	8.5e-89	Malic enzyme, NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0013057)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G00570
fragaria_vesca	FvH4_7g13590
malus_domestica	MD01G1052400.v1.1 MD07G1129000.v1.1
prunus_persica	Prupe.2G160000_v2.0.a1 Prupe.2G160000_v2.0.a1 Prupe.2G160000_v2.0.a1
pyrus_communis	pycom01g07810 pycom07g12470
rosa_chinensis	RchiOBHm_Chr1g0353381
rosa_laevigata	RLG00000028273
rosa_multiflora	Rmu_sc0001207.1_g000013
rosa_roxburghii	Rroxscaffold_4G00301880
rosa_rugosa	Rorug01G0235600
rosa_samantha	Rh1AG247800 Rh1BG217600 Rh1CG231500
rosa_wichuraiana	Rw1G021590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1330
AccB7I	CCANNNNNTGG	1 cut(s)	1502
AccI	GTMKAC	3 cut(s)	65, 955, 1207
AccII	CGCG	8 cut(s)	19, 32, 37, 102, 183, 199, 451, 453
AciI	CCGC	9 cut(s)	27, 30, 37, 102, 183, 197, 449, 453, 1679
AclI	AACGTT	1 cut(s)	859
AclWI	GGATC	6 cut(s)	67, 116, 317, 1136, 1163, 1619
AcuI	CTGAAG	3 cut(s)	1258, 1392, 1722
AcyI	GRCGYC	1 cut(s)	445
AdeI	CACNNNGTG	1 cut(s)	200
AfaI	GTAC	5 cut(s)	347, 679, 752, 1038, 1487
AfiI	CCNNNNNNNGG	3 cut(s)	36, 407, 1502
AflIII	ACRYGT	2 cut(s)	1482, 1740
AgsI	TTSAA	7 cut(s)	133, 830, 848, 886, 1184, 1214, 1314
AjnI	CCWGG	3 cut(s)	76, 125, 1495
AloI	GAACNNNNNNTCC	2 cut(s)	1005, 1037
AluBI	AGCT	8 cut(s)	632, 1001, 1073, 1202, 1228, 1652, 1664, 1732
AluI	AGCT	8 cut(s)	632, 1001, 1073, 1202, 1228, 1652, 1664, 1732
Alw21I	GWGCWC	2 cut(s)	1516, 1531
Alw26I	GTCTC	2 cut(s)	332, 1748
AlwI	GGATC	6 cut(s)	67, 116, 317, 1136, 1163, 1619
AlwNI	CAGNNNCTG	1 cut(s)	1565
AoxI	GGCC	7 cut(s)	56, 509, 562, 797, 804, 1459, 1721
ApaI	GGGCCC	1 cut(s)	1725
ApeKI	GCWGC	9 cut(s)	217, 626, 629, 853, 1073, 1076, 1151, 1559, 1664
AseI	ATTAAT	1 cut(s)	639
Asp700I	GAANNNNTTC	1 cut(s)	783
AspA2I	CCTAGG	2 cut(s)	565, 731
AspLEI	GCGC	2 cut(s)	107, 453
AspS9I	GGNCC	4 cut(s)	80, 798, 1721, 1722
AsuHPI	GGTGA	2 cut(s)	581, 1406
AvaII	GGWCC	1 cut(s)	80
AvrII	CCTAGG	2 cut(s)	565, 731
BaeGI	GKGCMC	1 cut(s)	1725
BanII	GRGCYC	2 cut(s)	949, 1725
BbsI	GAAGAC	2 cut(s)	708, 1264
Bbv12I	GWGCWC	2 cut(s)	1516, 1531
BbvCI	CCTCAGC	1 cut(s)	1653
BbvI	GCAGC	9 cut(s)	229, 613, 641, 840, 1060, 1063, 1138, 1571, 1651
BccI	CCATC	4 cut(s)	539, 1103, 1538, 1630
BceAI	ACGGC	3 cut(s)	43, 84, 767
BcgI	CGANNNNNNTGC	2 cut(s)	209, 243
BciT130I	CCWGG	3 cut(s)	78, 127, 1497
BclI	TGATCA	1 cut(s)	517
BcoDI	GTCTC	2 cut(s)	332, 1748
BfaI	CTAG	7 cut(s)	254, 566, 732, 932, 1115, 1164, 1203
BfmI	CTRYAG	3 cut(s)	402, 627, 1173
BfoI	RGCGCY	1 cut(s)	108
BfuAI	ACCTGC	1 cut(s)	1330
BlnI	CCTAGG	2 cut(s)	565, 731
BlpI	GCTNAGC	1 cut(s)	41
Bme1390I	CCNGG	3 cut(s)	78, 127, 1497
Bme18I	GGWCC	1 cut(s)	80
BmgT120I	GGNCC	4 cut(s)	80, 798, 1721, 1722
BmiI	GGNNCC	3 cut(s)	1722, 1723, 1787
BmrFI	CCNGG	3 cut(s)	78, 127, 1497
BmsI	GCATC	2 cut(s)	1366, 1571
BpiI	GAAGAC	2 cut(s)	708, 1264
Bpu10I	CCTNAGC	2 cut(s)	1190, 1653
Bpu1102I	GCTNAGC	1 cut(s)	41
BpuEI	CTTGAG	1 cut(s)	1214
Bsa29I	ATCGAT	1 cut(s)	169
BsaHI	GRCGYC	1 cut(s)	445
BsaJI	CCNNGG	9 cut(s)	76, 125, 294, 565, 574, 731, 801, 949, 1496
BsaXI	ACNNNNNCTCC	4 cut(s)	476, 506, 1653, 1683
Bsc4I	CCNNNNNNNGG	3 cut(s)	36, 407, 1502
Bse118I	RCCGGY	2 cut(s)	658, 908
Bse1I	ACTGG	4 cut(s)	148, 702, 966, 1701
Bse3DI	GCAATG	3 cut(s)	1302, 1453, 1708
BseBI	CCWGG	3 cut(s)	78, 127, 1497
BseCI	ATCGAT	1 cut(s)	169
BseDI	CCNNGG	9 cut(s)	76, 125, 294, 565, 574, 731, 801, 949, 1496
BseGI	GGATG	1 cut(s)	1549
BseLI	CCNNNNNNNGG	3 cut(s)	36, 407, 1502
BseMI	GCAATG	3 cut(s)	1302, 1453, 1708
BseMII	CTCAG	2 cut(s)	32, 1644
BseNI	ACTGG	4 cut(s)	148, 702, 966, 1701
BseRI	GAGGAG	2 cut(s)	1295, 1766
BseSI	GKGCMC	1 cut(s)	1725
BseXI	GCAGC	9 cut(s)	229, 613, 641, 840, 1060, 1063, 1138, 1571, 1651
BsgI	GTGCAG	2 cut(s)	833, 1137
Bsh1236I	CGCG	8 cut(s)	19, 32, 37, 102, 183, 199, 451, 453
Bsh1285I	CGRYCG	2 cut(s)	50, 251
BshFI	GGCC	7 cut(s)	58, 511, 564, 799, 806, 1461, 1723
BshVI	ATCGAT	1 cut(s)	169
BsiEI	CGRYCG	2 cut(s)	50, 251
BsiHKAI	GWGCWC	2 cut(s)	1516, 1531
BsiSI	CCGG	2 cut(s)	659, 909
BslFI	GGGAC	1 cut(s)	285
BslI	CCNNNNNNNGG	3 cut(s)	36, 407, 1502
BsmAI	GTCTC	2 cut(s)	332, 1748
BsmFI	GGGAC	1 cut(s)	285
BsmI	GAATGC	3 cut(s)	1360, 1367, 1574
BsnI	GGCC	7 cut(s)	58, 511, 564, 799, 806, 1461, 1723
Bsp120I	GGGCCC	1 cut(s)	1721
Bsp1286I	GDGCHC	4 cut(s)	949, 1516, 1531, 1725
Bsp1407I	TGTACA	1 cut(s)	1036
Bsp1720I	GCTNAGC	1 cut(s)	41
Bsp68I	TCGCGA	1 cut(s)	19
BspACI	CCGC	9 cut(s)	27, 30, 37, 102, 183, 197, 449, 453, 1679
BspANI	GGCC	7 cut(s)	58, 511, 564, 799, 806, 1461, 1723
BspCNI	CTCAG	2 cut(s)	33, 1645
BspDI	ATCGAT	1 cut(s)	169
BspFNI	CGCG	8 cut(s)	19, 32, 37, 102, 183, 199, 451, 453
BspHI	TCATGA	1 cut(s)	1810
BspLI	GGNNCC	3 cut(s)	1722, 1723, 1787
BspMAI	CTGCAG	2 cut(s)	631, 1177
BspMI	ACCTGC	1 cut(s)	1330
BspPI	GGATC	6 cut(s)	67, 116, 317, 1136, 1163, 1619
BsrDI	GCAATG	3 cut(s)	1302, 1453, 1708
BsrFI	RCCGGY	2 cut(s)	658, 908
BsrGI	TGTACA	1 cut(s)	1036
BsrI	ACTGG	4 cut(s)	148, 702, 966, 1701
BssAI	RCCGGY	2 cut(s)	658, 908
BssECI	CCNNGG	9 cut(s)	76, 125, 294, 565, 574, 731, 801, 949, 1496
BssNI	GRCGYC	1 cut(s)	445
BssT1I	CCWWGG	6 cut(s)	294, 565, 574, 731, 801, 949
Bst2UI	CCWGG	3 cut(s)	78, 127, 1497
Bst4CI	ACNGT	7 cut(s)	268, 406, 707, 866, 940, 1067, 1759
Bst6I	CTCTTC	1 cut(s)	741
BstACI	GRCGYC	1 cut(s)	445
BstAPI	GCANNNNNTGC	1 cut(s)	1160
BstAUI	TGTACA	1 cut(s)	1036
BstC8I	GCNNGC	5 cut(s)	449, 513, 1389, 1557, 1677
BstDEI	CTNAG	4 cut(s)	41, 1025, 1190, 1653
BstEII	GGTNACC	1 cut(s)	569
BstENI	CCTNNNNNAGG	1 cut(s)	405
BstF5I	GGATG	1 cut(s)	1549
BstFNI	CGCG	8 cut(s)	19, 32, 37, 102, 183, 199, 451, 453
BstH2I	RGCGCY	1 cut(s)	108
BstHHI	GCGC	2 cut(s)	107, 453
BstMAI	GTCTC	2 cut(s)	332, 1748
BstMCI	CGRYCG	2 cut(s)	50, 251
BstNI	CCWGG	3 cut(s)	78, 127, 1497
BstNSI	RCATGY	4 cut(s)	1391, 1486, 1552, 1744
BstPI	GGTNACC	1 cut(s)	569
BstSCI	CCNGG	3 cut(s)	76, 125, 1495
BstSFI	CTRYAG	3 cut(s)	402, 627, 1173
BstSLI	GKGCMC	1 cut(s)	1725
BstUI	CGCG	8 cut(s)	19, 32, 37, 102, 183, 199, 451, 453
BstV1I	GCAGC	9 cut(s)	229, 613, 641, 840, 1060, 1063, 1138, 1571, 1651
BstV2I	GAAGAC	2 cut(s)	708, 1264
BstX2I	RGATCY	3 cut(s)	309, 1168, 1611
BstYI	RGATCY	3 cut(s)	309, 1168, 1611
Bsu15I	ATCGAT	1 cut(s)	169
BsuRI	GGCC	7 cut(s)	58, 511, 564, 799, 806, 1461, 1723
BsuTUI	ATCGAT	1 cut(s)	169
BtgZI	GCGATG	1 cut(s)	1349
BtsCI	GGATG	1 cut(s)	1549
BtsI	GCAGTG	1 cut(s)	1365
BtsIMutI	CAGTG	7 cut(s)	141, 156, 472, 959, 1072, 1282, 1365
BtuMI	TCGCGA	1 cut(s)	19
BveI	ACCTGC	1 cut(s)	1330
Cac8I	GCNNGC	5 cut(s)	449, 513, 1389, 1557, 1677
CaiI	CAGNNNCTG	1 cut(s)	1565
CciI	TCATGA	1 cut(s)	1810
CfoI	GCGC	2 cut(s)	107, 453
Cfr10I	RCCGGY	2 cut(s)	658, 908
Cfr13I	GGNCC	4 cut(s)	80, 798, 1721, 1722
ClaI	ATCGAT	1 cut(s)	169
CseI	GACGC	2 cut(s)	21, 453
Csp6I	GTAC	5 cut(s)	346, 678, 751, 1037, 1486
CspCI	CAANNNNNGTGG	2 cut(s)	818, 853
CviQI	GTAC	5 cut(s)	346, 678, 751, 1037, 1486
DdeI	CTNAG	4 cut(s)	41, 1025, 1190, 1653
DraIII	CACNNNGTG	1 cut(s)	200
Eam1104I	CTCTTC	1 cut(s)	741
EarI	CTCTTC	1 cut(s)	741
Eco130I	CCWWGG	6 cut(s)	294, 565, 574, 731, 801, 949
Eco24I	GRGCYC	2 cut(s)	949, 1725
Eco32I	GATATC	2 cut(s)	1539, 1600
Eco47I	GGWCC	1 cut(s)	80
Eco57I	CTGAAG	3 cut(s)	1258, 1392, 1722
Eco91I	GGTNACC	1 cut(s)	569
EcoNI	CCTNNNNNAGG	1 cut(s)	405
EcoO109I	RGGNCCY	1 cut(s)	1721
EcoO65I	GGTNACC	1 cut(s)	569
EcoRII	CCWGG	3 cut(s)	76, 125, 1495
EcoRV	GATATC	2 cut(s)	1539, 1600
EcoT14I	CCWWGG	6 cut(s)	294, 565, 574, 731, 801, 949
EcoT38I	GRGCYC	2 cut(s)	949, 1725
ErhI	CCWWGG	6 cut(s)	294, 565, 574, 731, 801, 949
FalI	AAGNNNNNCTT	4 cut(s)	693, 725, 1598, 1630
FaqI	GGGAC	1 cut(s)	285
FauI	CCCGC	1 cut(s)	456
FbaI	TGATCA	1 cut(s)	517
FblI	GTMKAC	3 cut(s)	65, 955, 1207
FokI	GGATG	1 cut(s)	1556
FriOI	GRGCYC	2 cut(s)	949, 1725
FspBI	CTAG	7 cut(s)	254, 566, 732, 932, 1115, 1164, 1203
GlaI	GCGC	2 cut(s)	106, 452
HaeII	RGCGCY	1 cut(s)	108
HaeIII	GGCC	7 cut(s)	58, 511, 564, 799, 806, 1461, 1723
HapII	CCGG	2 cut(s)	659, 909
HgaI	GACGC	2 cut(s)	21, 453
HhaI	GCGC	2 cut(s)	107, 453
Hin1I	GRCGYC	1 cut(s)	445
Hin6I	GCGC	2 cut(s)	105, 451
HinP1I	GCGC	2 cut(s)	105, 451
HincII	GTYRAC	2 cut(s)	66, 956
HindII	GTYRAC	2 cut(s)	66, 956
HinfI	GANTC	6 cut(s)	21, 239, 1260, 1304, 1310, 1771
HpaII	CCGG	2 cut(s)	659, 909
HphI	GGTGA	2 cut(s)	581, 1406
Hpy166II	GTNNAC	6 cut(s)	66, 94, 188, 956, 976, 1208
Hpy188I	TCNGA	4 cut(s)	1309, 1543, 1567, 1604
Hpy188III	TCNNGA	6 cut(s)	18, 1100, 1139, 1257, 1640, 1811
Hpy8I	GTNNAC	6 cut(s)	66, 94, 188, 956, 976, 1208
Hpy99I	CGWCG	3 cut(s)	37, 55, 70
HpyAV	CCTTC	5 cut(s)	4, 275, 734, 1178, 1697
HpyCH4III	ACNGT	7 cut(s)	268, 406, 707, 866, 940, 1067, 1759
HpyCH4IV	ACGT	2 cut(s)	793, 859
HpyF3I	CTNAG	4 cut(s)	41, 1025, 1190, 1653
HpySE526I	ACGT	2 cut(s)	793, 859
Hsp92I	GRCGYC	1 cut(s)	445
HspAI	GCGC	2 cut(s)	105, 451
Ksp22I	TGATCA	1 cut(s)	517
LmnI	GCTCC	6 cut(s)	388, 998, 1070, 1199, 1511, 1661
Lsp1109I	GCAGC	9 cut(s)	229, 613, 641, 840, 1060, 1063, 1138, 1571, 1651
LweI	GCATC	2 cut(s)	1366, 1571
MaeI	CTAG	7 cut(s)	254, 566, 732, 932, 1115, 1164, 1203
MaeII	ACGT	2 cut(s)	793, 859
MaeIII	GTNAC	4 cut(s)	569, 860, 1117, 1768
MboII	GAAGA	7 cut(s)	713, 758, 1088, 1264, 1385, 1607, 1703
MfeI	CAATTG	2 cut(s)	505, 759
MflI	RGATCY	3 cut(s)	309, 1168, 1611
MhlI	GDGCHC	4 cut(s)	949, 1516, 1531, 1725
MluCI	AATT	4 cut(s)	424, 505, 588, 759
MlyI	GAGTC	3 cut(s)	248, 1269, 1765
MmeI	TCCRAC	2 cut(s)	717, 1370
MroXI	GAANNNNTTC	1 cut(s)	783
MseI	TTAA	7 cut(s)	314, 639, 1049, 1221, 1290, 1383, 1428
MslI	CAYNNNNRTG	2 cut(s)	1392, 1567
MspA1I	CMGCKG	2 cut(s)	632, 1652
MspI	CCGG	2 cut(s)	659, 909
MspR9I	CCNGG	3 cut(s)	78, 127, 1497
MunI	CAATTG	2 cut(s)	505, 759
Mva1269I	GAATGC	3 cut(s)	1360, 1367, 1574
MvaI	CCWGG	3 cut(s)	78, 127, 1497
MvnI	CGCG	8 cut(s)	19, 32, 37, 102, 183, 199, 451, 453
NlaIV	GGNNCC	3 cut(s)	1722, 1723, 1787
NmuCI	GTSAC	3 cut(s)	569, 1117, 1768
NruI	TCGCGA	1 cut(s)	19
NspI	RCATGY	4 cut(s)	1391, 1486, 1552, 1744
PaeI	GCATGC	1 cut(s)	1391
PagI	TCATGA	1 cut(s)	1810
PciI	ACATGT	2 cut(s)	1482, 1740
PcsI	WCGNNNNNNNCGW	1 cut(s)	56
PctI	GAATGC	3 cut(s)	1360, 1367, 1574
PdmI	GAANNNNTTC	1 cut(s)	783
PfeI	GAWTC	3 cut(s)	21, 1304, 1310
PflMI	CCANNNNNTGG	1 cut(s)	1502
Ple19I	CGATCG	1 cut(s)	50
PleI	GAGTC	3 cut(s)	247, 1268, 1765
PpsI	GAGTC	3 cut(s)	247, 1268, 1765
PscI	ACATGT	2 cut(s)	1482, 1740
PshBI	ATTAAT	1 cut(s)	639
Psp1406I	AACGTT	1 cut(s)	859
Psp6I	CCWGG	3 cut(s)	76, 125, 1495
PspEI	GGTNACC	1 cut(s)	569
PspGI	CCWGG	3 cut(s)	76, 125, 1495
PspN4I	GGNNCC	3 cut(s)	1722, 1723, 1787
PspOMI	GGGCCC	1 cut(s)	1721
PspPI	GGNCC	4 cut(s)	80, 798, 1721, 1722
PstI	CTGCAG	2 cut(s)	631, 1177
PstNI	CAGNNNCTG	1 cut(s)	1565
PsuI	RGATCY	3 cut(s)	309, 1168, 1611
PvuI	CGATCG	1 cut(s)	50
PvuII	CAGCTG	2 cut(s)	632, 1652
RruI	TCGCGA	1 cut(s)	19
RsaI	GTAC	5 cut(s)	347, 679, 752, 1038, 1487
RsaNI	GTAC	5 cut(s)	346, 678, 751, 1037, 1486
RseI	CAYNNNNRTG	2 cut(s)	1392, 1567
SalI	GTCGAC	2 cut(s)	64, 954
SaqAI	TTAA	7 cut(s)	314, 639, 1049, 1221, 1290, 1383, 1428
Sau96I	GGNCC	4 cut(s)	80, 798, 1721, 1722
SchI	GAGTC	3 cut(s)	248, 1269, 1765
ScrFI	CCNGG	3 cut(s)	78, 127, 1497
SduI	GDGCHC	4 cut(s)	949, 1516, 1531, 1725
SfaNI	GCATC	2 cut(s)	1366, 1571
SfcI	CTRYAG	3 cut(s)	402, 627, 1173
SinI	GGWCC	1 cut(s)	80
SmiMI	CAYNNNNRTG	2 cut(s)	1392, 1567
SmlI	CTYRAG	1 cut(s)	1229
SmoI	CTYRAG	1 cut(s)	1229
SphI	GCATGC	1 cut(s)	1391
Sse9I	AATT	4 cut(s)	424, 505, 588, 759
SsiI	CCGC	9 cut(s)	27, 30, 37, 102, 183, 197, 449, 453, 1679
SspMI	CTAG	7 cut(s)	254, 566, 732, 932, 1115, 1164, 1203
StyD4I	CCNGG	3 cut(s)	76, 125, 1495
StyI	CCWWGG	6 cut(s)	294, 565, 574, 731, 801, 949
TaaI	ACNGT	7 cut(s)	268, 406, 707, 866, 940, 1067, 1759
TaiI	ACGT	2 cut(s)	796, 862
TaqI	TCGA	7 cut(s)	50, 65, 169, 213, 724, 955, 1639
TaqII	GACCGA	1 cut(s)	237
TasI	AATT	4 cut(s)	424, 505, 588, 759
TatI	WGTACW	3 cut(s)	345, 750, 1036
TauI	GCSGC	5 cut(s)	29, 32, 40, 105, 1682
TfiI	GAWTC	3 cut(s)	21, 1304, 1310
Tru1I	TTAA	7 cut(s)	314, 639, 1049, 1221, 1290, 1383, 1428
Tru9I	TTAA	7 cut(s)	314, 639, 1049, 1221, 1290, 1383, 1428
TscAI	CASTG	7 cut(s)	148, 163, 472, 966, 1072, 1282, 1372
TseFI	GTSAC	3 cut(s)	569, 1117, 1768
TseI	GCWGC	9 cut(s)	217, 626, 629, 853, 1073, 1076, 1151, 1559, 1664
Tsp45I	GTSAC	3 cut(s)	569, 1117, 1768
TspDTI	ATGAA	9 cut(s)	223, 702, 763, 776, 848, 1367, 1569, 1608, 1799
TspRI	CASTG	7 cut(s)	148, 163, 472, 966, 1072, 1282, 1372
Van91I	CCANNNNNTGG	1 cut(s)	1502
VpaK11BI	GGWCC	1 cut(s)	80
VspI	ATTAAT	1 cut(s)	639
XagI	CCTNNNNNAGG	1 cut(s)	405
XceI	RCATGY	4 cut(s)	1391, 1486, 1552, 1744
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1244
XmaJI	CCTAGG	2 cut(s)	565, 731
XmiI	GTMKAC	3 cut(s)	65, 955, 1207
XmnI	GAANNNNTTC	1 cut(s)	783
XspI	CTAG	7 cut(s)	254, 566, 732, 932, 1115, 1164, 1203

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.