Encoded by
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G14990 AT5G14990 |
| fragaria_vesca | FvH4_7g19620 |
| malus_domestica | MD07G1174900.v1.1 |
| prunus_persica | Prupe.2G214000_v2.0.a1 |
| pyrus_communis | pycom01g13580 pycom07g16930 |
| rosa_chinensis | RchiOBHm_Chr1g0363431 |
| rosa_laevigata | RLG00000027566 |
| rosa_multiflora | Rmu_sc0000339.1_g000011 |
| rosa_roxburghii | Rroxscaffold_4G00293190 |
| rosa_rugosa | Rorug01G0306700 |
| rosa_samantha | Rh1AG315800 Rh1BG279100 Rh1CG295500 Rh1DG310200 |
| rosa_wichuraiana | Rw1G027970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 2358, 2619 |
| Acc36I | ACCTGC | 3 cut(s) | 418, 1497, 2294 |
| AccB1I | GGYRCC | 1 cut(s) | 835 |
| AccBSI | CCGCTC | 1 cut(s) | 85 |
| AccI | GTMKAC | 1 cut(s) | 1979 |
| AccII | CGCG | 1 cut(s) | 1916 |
| AciI | CCGC | 8 cut(s) | 85, 226, 739, 907, 973, 1028, 1057, 1916 |
| AclWI | GGATC | 5 cut(s) | 326, 576, 1509, 1651, 2682 |
| AcsI | RAATTY | 6 cut(s) | 412, 1062, 1081, 1399, 2108, 2497 |
| AcuI | CTGAAG | 2 cut(s) | 1073, 1388 |
| AfaI | GTAC | 7 cut(s) | 347, 464, 498, 764, 1446, 1595, 2583 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1354, 1624, 2077 |
| AjnI | CCWGG | 3 cut(s) | 1509, 1580, 1895 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 548, 580 |
| AleI | CACNNNNGTG | 1 cut(s) | 1112 |
| Alw21I | GWGCWC | 1 cut(s) | 30 |
| Alw26I | GTCTC | 5 cut(s) | 245, 554, 1248, 1677, 2779 |
| Alw44I | GTGCAC | 1 cut(s) | 26 |
| AlwI | GGATC | 5 cut(s) | 326, 576, 1509, 1651, 2682 |
| AoxI | GGCC | 3 cut(s) | 617, 970, 2049 |
| ApaLI | GTGCAC | 1 cut(s) | 26 |
| ApeKI | GCWGC | 5 cut(s) | 119, 628, 904, 1706, 2758 |
| ApoI | RAATTY | 6 cut(s) | 412, 1062, 1081, 1399, 2108, 2497 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2264, 2296 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1736 |
| AspLEI | GCGC | 1 cut(s) | 1916 |
| AspS9I | GGNCC | 1 cut(s) | 909 |
| AsuHPI | GGTGA | 6 cut(s) | 625, 932, 1153, 2351, 2506, 2739 |
| AvaII | GGWCC | 1 cut(s) | 909 |
| BaeGI | GKGCMC | 1 cut(s) | 30 |
| BanI | GGYRCC | 1 cut(s) | 835 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1428, 1460 |
| BauI | CACGAG | 1 cut(s) | 857 |
| BbsI | GAAGAC | 1 cut(s) | 2702 |
| Bbv12I | GWGCWC | 1 cut(s) | 30 |
| BbvI | GCAGC | 5 cut(s) | 106, 640, 916, 1693, 2770 |
| BccI | CCATC | 6 cut(s) | 250, 374, 1306, 1331, 1844, 2455 |
| BciT130I | CCWGG | 3 cut(s) | 1511, 1582, 1897 |
| BciVI | GTATCC | 2 cut(s) | 2255, 2748 |
| BclI | TGATCA | 1 cut(s) | 421 |
| BcoDI | GTCTC | 5 cut(s) | 245, 554, 1248, 1677, 2779 |
| BfaI | CTAG | 7 cut(s) | 338, 500, 1089, 1148, 1820, 2319, 2705 |
| BfmI | CTRYAG | 1 cut(s) | 2756 |
| BfuAI | ACCTGC | 3 cut(s) | 418, 1497, 2294 |
| BfuI | GTATCC | 2 cut(s) | 2255, 2748 |
| BglII | AGATCT | 2 cut(s) | 396, 1416 |
| BisI | GCNGC | 6 cut(s) | 120, 629, 905, 973, 1707, 2759 |
| BlsI | GCNGC | 6 cut(s) | 121, 630, 906, 974, 1708, 2760 |
| BmcAI | AGTACT | 1 cut(s) | 764 |
| Bme1390I | CCNGG | 3 cut(s) | 1511, 1582, 1897 |
| Bme18I | GGWCC | 1 cut(s) | 909 |
| BmgT120I | GGNCC | 1 cut(s) | 909 |
| BmiI | GGNNCC | 1 cut(s) | 837 |
| BmrFI | CCNGG | 3 cut(s) | 1511, 1582, 1897 |
| BmsI | GCATC | 6 cut(s) | 1116, 1159, 1246, 1353, 2050, 2569 |
| BpiI | GAAGAC | 1 cut(s) | 2702 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 319, 351 |
| BpuEI | CTTGAG | 7 cut(s) | 101, 197, 227, 473, 1616, 2524, 2735 |
| BsaBI | GATNNNNATC | 3 cut(s) | 260, 882, 2358 |
| BsaI | GGTCTC | 2 cut(s) | 1248, 2779 |
| BsaJI | CCNNGG | 1 cut(s) | 1581 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 452, 482, 752, 782, 1226, 1256, 2457, 2487 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1354, 1624, 2077 |
| Bse1I | ACTGG | 4 cut(s) | 620, 770, 2589, 2750 |
| Bse3DI | GCAATG | 3 cut(s) | 42, 129, 638 |
| Bse8I | GATNNNNATC | 3 cut(s) | 260, 882, 2358 |
| BseBI | CCWGG | 3 cut(s) | 1511, 1582, 1897 |
| BseDI | CCNNGG | 1 cut(s) | 1581 |
| BseGI | GGATG | 5 cut(s) | 382, 1131, 1174, 1368, 2533 |
| BseJI | GATNNNNATC | 3 cut(s) | 260, 882, 2358 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1354, 1624, 2077 |
| BseMI | GCAATG | 3 cut(s) | 42, 129, 638 |
| BseMII | CTCAG | 8 cut(s) | 243, 284, 600, 780, 1260, 1545, 2337, 2658 |
| BseNI | ACTGG | 4 cut(s) | 620, 770, 2589, 2750 |
| BseRI | GAGGAG | 2 cut(s) | 356, 977 |
| BseSI | GKGCMC | 1 cut(s) | 30 |
| BseXI | GCAGC | 5 cut(s) | 106, 640, 916, 1693, 2770 |
| BseYI | CCCAGC | 1 cut(s) | 2311 |
| BsgI | GTGCAG | 2 cut(s) | 510, 1582 |
| Bsh1236I | CGCG | 1 cut(s) | 1916 |
| BshFI | GGCC | 3 cut(s) | 619, 972, 2051 |
| BshNI | GGYRCC | 1 cut(s) | 835 |
| BsiHKAI | GWGCWC | 1 cut(s) | 30 |
| BsiSI | CCGG | 1 cut(s) | 458 |
| BslFI | GGGAC | 1 cut(s) | 1307 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1354, 1624, 2077 |
| BsmAI | GTCTC | 5 cut(s) | 245, 554, 1248, 1677, 2779 |
| BsmBI | CGTCTC | 1 cut(s) | 245 |
| BsmFI | GGGAC | 1 cut(s) | 1307 |
| BsnI | GGCC | 3 cut(s) | 619, 972, 2051 |
| Bso31I | GGTCTC | 2 cut(s) | 1248, 2779 |
| Bsp1286I | GDGCHC | 1 cut(s) | 30 |
| BspACI | CCGC | 8 cut(s) | 85, 226, 739, 907, 973, 1028, 1057, 1916 |
| BspANI | GGCC | 3 cut(s) | 619, 972, 2051 |
| BspCNI | CTCAG | 8 cut(s) | 244, 285, 601, 781, 1261, 1546, 2338, 2659 |
| BspFNI | CGCG | 1 cut(s) | 1916 |
| BspHI | TCATGA | 3 cut(s) | 1000, 1828, 2644 |
| BspLI | GGNNCC | 1 cut(s) | 837 |
| BspMAI | CTGCAG | 1 cut(s) | 2760 |
| BspMI | ACCTGC | 3 cut(s) | 418, 1497, 2294 |
| BspPI | GGATC | 5 cut(s) | 326, 576, 1509, 1651, 2682 |
| BspQI | GCTCTTC | 3 cut(s) | 705, 1032, 1581 |
| BspT107I | GGYRCC | 1 cut(s) | 835 |
| BspTNI | GGTCTC | 2 cut(s) | 1248, 2779 |
| BsrBI | CCGCTC | 1 cut(s) | 85 |
| BsrDI | GCAATG | 3 cut(s) | 42, 129, 638 |
| BsrI | ACTGG | 4 cut(s) | 620, 770, 2589, 2750 |
| BssECI | CCNNGG | 1 cut(s) | 1581 |
| BssNAI | GTATAC | 1 cut(s) | 1980 |
| BssSI | CACGAG | 1 cut(s) | 857 |
| Bst1107I | GTATAC | 1 cut(s) | 1980 |
| Bst2BI | CACGAG | 1 cut(s) | 857 |
| Bst2UI | CCWGG | 3 cut(s) | 1511, 1582, 1897 |
| Bst4CI | ACNGT | 3 cut(s) | 706, 1615, 2736 |
| BstC8I | GCNNGC | 1 cut(s) | 2414 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1622, 2075 |
| BstF5I | GGATG | 5 cut(s) | 382, 1131, 1174, 1368, 2533 |
| BstFNI | CGCG | 1 cut(s) | 1916 |
| BstHHI | GCGC | 1 cut(s) | 1916 |
| BstMAI | GTCTC | 5 cut(s) | 245, 554, 1248, 1677, 2779 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 433, 442, 625, 634, 736, 901 |
| BstNI | CCWGG | 3 cut(s) | 1511, 1582, 1897 |
| BstNSI | RCATGY | 1 cut(s) | 719 |
| BstSCI | CCNGG | 3 cut(s) | 1509, 1580, 1895 |
| BstSFI | CTRYAG | 1 cut(s) | 2756 |
| BstSLI | GKGCMC | 1 cut(s) | 30 |
| BstUI | CGCG | 1 cut(s) | 1916 |
| BstV1I | GCAGC | 5 cut(s) | 106, 640, 916, 1693, 2770 |
| BstV2I | GAAGAC | 1 cut(s) | 2702 |
| BstX2I | RGATCY | 5 cut(s) | 396, 568, 1416, 1501, 2674 |
| BstYI | RGATCY | 5 cut(s) | 396, 568, 1416, 1501, 2674 |
| BstZ17I | GTATAC | 1 cut(s) | 1980 |
| BsuI | GTATCC | 2 cut(s) | 2255, 2748 |
| BsuRI | GGCC | 3 cut(s) | 619, 972, 2051 |
| BtsCI | GGATG | 5 cut(s) | 382, 1131, 1174, 1368, 2533 |
| BtsI | GCAGTG | 1 cut(s) | 190 |
| BtsIMutI | CAGTG | 3 cut(s) | 190, 1544, 1551 |
| BveI | ACCTGC | 3 cut(s) | 418, 1497, 2294 |
| Cac8I | GCNNGC | 1 cut(s) | 2414 |
| CciI | TCATGA | 3 cut(s) | 1000, 1828, 2644 |
| CfoI | GCGC | 1 cut(s) | 1916 |
| Cfr13I | GGNCC | 1 cut(s) | 909 |
| CseI | GACGC | 2 cut(s) | 227, 788 |
| Csp6I | GTAC | 7 cut(s) | 346, 463, 497, 763, 1445, 1594, 2582 |
| CviQI | GTAC | 7 cut(s) | 346, 463, 497, 763, 1445, 1594, 2582 |
| DraI | TTTAAA | 1 cut(s) | 144 |
| Eco147I | AGGCCT | 1 cut(s) | 2051 |
| Eco31I | GGTCTC | 2 cut(s) | 1248, 2779 |
| Eco32I | GATATC | 1 cut(s) | 1939 |
| Eco47I | GGWCC | 1 cut(s) | 909 |
| Eco57I | CTGAAG | 2 cut(s) | 1073, 1388 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1622, 2075 |
| EcoRI | GAATTC | 1 cut(s) | 412 |
| EcoRII | CCWGG | 3 cut(s) | 1509, 1580, 1895 |
| EcoRV | GATATC | 1 cut(s) | 1939 |
| EcoT22I | ATGCAT | 1 cut(s) | 2065 |
| Esp3I | CGTCTC | 1 cut(s) | 245 |
| FaqI | GGGAC | 1 cut(s) | 1307 |
| FauI | CCCGC | 2 cut(s) | 732, 1050 |
| FauNDI | CATATG | 2 cut(s) | 2001, 2425 |
| FbaI | TGATCA | 1 cut(s) | 421 |
| FblI | GTMKAC | 1 cut(s) | 1979 |
| Fnu4HI | GCNGC | 6 cut(s) | 120, 629, 905, 973, 1707, 2759 |
| FokI | GGATG | 5 cut(s) | 389, 1138, 1181, 1375, 2540 |
| Fsp4HI | GCNGC | 6 cut(s) | 120, 629, 905, 973, 1707, 2759 |
| FspBI | CTAG | 7 cut(s) | 338, 500, 1089, 1148, 1820, 2319, 2705 |
| GlaI | GCGC | 1 cut(s) | 1915 |
| GluI | GCNGC | 6 cut(s) | 120, 629, 905, 973, 1707, 2759 |
| GsaI | CCCAGC | 1 cut(s) | 2315 |
| HaeIII | GGCC | 3 cut(s) | 619, 972, 2051 |
| HapII | CCGG | 1 cut(s) | 458 |
| HgaI | GACGC | 2 cut(s) | 227, 788 |
| HhaI | GCGC | 1 cut(s) | 1916 |
| Hin6I | GCGC | 1 cut(s) | 1914 |
| HinP1I | GCGC | 1 cut(s) | 1914 |
| HincII | GTYRAC | 1 cut(s) | 2403 |
| HindII | GTYRAC | 1 cut(s) | 2403 |
| HindIII | AAGCTT | 3 cut(s) | 893, 2625, 2823 |
| HpaII | CCGG | 1 cut(s) | 458 |
| HphI | GGTGA | 6 cut(s) | 625, 932, 1153, 2351, 2506, 2739 |
| Hpy166II | GTNNAC | 5 cut(s) | 28, 1980, 2403, 2463, 2533 |
| Hpy8I | GTNNAC | 5 cut(s) | 28, 1980, 2403, 2463, 2533 |
| Hpy99I | CGWCG | 1 cut(s) | 13 |
| HpyCH4III | ACNGT | 3 cut(s) | 706, 1615, 2736 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 433, 442, 625, 634, 736, 901 |
| HspAI | GCGC | 1 cut(s) | 1914 |
| Ksp22I | TGATCA | 1 cut(s) | 421 |
| LguI | GCTCTTC | 3 cut(s) | 705, 1032, 1581 |
| LmnI | GCTCC | 1 cut(s) | 2233 |
| Lsp1109I | GCAGC | 5 cut(s) | 106, 640, 916, 1693, 2770 |
| LweI | GCATC | 6 cut(s) | 1116, 1159, 1246, 1353, 2050, 2569 |
| MaeI | CTAG | 7 cut(s) | 338, 500, 1089, 1148, 1820, 2319, 2705 |
| MaeIII | GTNAC | 5 cut(s) | 221, 800, 854, 1423, 1559 |
| MbiI | CCGCTC | 1 cut(s) | 85 |
| MflI | RGATCY | 5 cut(s) | 396, 568, 1416, 1501, 2674 |
| MhlI | GDGCHC | 1 cut(s) | 30 |
| MlyI | GAGTC | 4 cut(s) | 257, 862, 1679, 2447 |
| MmeI | TCCRAC | 4 cut(s) | 111, 1461, 2500, 2505 |
| Mph1103I | ATGCAT | 1 cut(s) | 2065 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1736 |
| MseI | TTAA | 7 cut(s) | 89, 143, 1653, 1952, 1968, 2076, 2808 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1112, 1350 |
| MspA1I | CMGCKG | 2 cut(s) | 907, 2311 |
| MspI | CCGG | 1 cut(s) | 458 |
| MspR9I | CCNGG | 3 cut(s) | 1511, 1582, 1897 |
| MvaI | CCWGG | 3 cut(s) | 1511, 1582, 1897 |
| MvnI | CGCG | 1 cut(s) | 1916 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 433, 442, 625, 634, 736, 901 |
| NdeI | CATATG | 2 cut(s) | 2001, 2425 |
| NlaIV | GGNNCC | 1 cut(s) | 837 |
| NmuCI | GTSAC | 3 cut(s) | 221, 800, 854 |
| NsiI | ATGCAT | 1 cut(s) | 2065 |
| NspI | RCATGY | 1 cut(s) | 719 |
| OliI | CACNNNNGTG | 1 cut(s) | 1112 |
| PagI | TCATGA | 3 cut(s) | 1000, 1828, 2644 |
| PceI | AGGCCT | 1 cut(s) | 2051 |
| PciSI | GCTCTTC | 3 cut(s) | 705, 1032, 1581 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1736 |
| PkrI | GCNGC | 6 cut(s) | 121, 630, 906, 974, 1708, 2760 |
| PleI | GAGTC | 4 cut(s) | 256, 861, 1678, 2447 |
| PpsI | GAGTC | 4 cut(s) | 256, 861, 1678, 2447 |
| PsiI | TTATAA | 2 cut(s) | 2358, 2619 |
| Psp6I | CCWGG | 3 cut(s) | 1509, 1580, 1895 |
| PspFI | CCCAGC | 1 cut(s) | 2311 |
| PspGI | CCWGG | 3 cut(s) | 1509, 1580, 1895 |
| PspN4I | GGNNCC | 1 cut(s) | 837 |
| PspPI | GGNCC | 1 cut(s) | 909 |
| PstI | CTGCAG | 1 cut(s) | 2760 |
| PsuI | RGATCY | 5 cut(s) | 396, 568, 1416, 1501, 2674 |
| PvuII | CAGCTG | 1 cut(s) | 2311 |
| RsaI | GTAC | 7 cut(s) | 347, 464, 498, 764, 1446, 1595, 2583 |
| RsaNI | GTAC | 7 cut(s) | 346, 463, 497, 763, 1445, 1594, 2582 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1112, 1350 |
| SapI | GCTCTTC | 3 cut(s) | 705, 1032, 1581 |
| SaqAI | TTAA | 7 cut(s) | 89, 143, 1653, 1952, 1968, 2076, 2808 |
| SatI | GCNGC | 6 cut(s) | 120, 629, 905, 973, 1707, 2759 |
| Sau96I | GGNCC | 1 cut(s) | 909 |
| ScaI | AGTACT | 1 cut(s) | 764 |
| SchI | GAGTC | 4 cut(s) | 257, 862, 1679, 2447 |
| ScrFI | CCNGG | 3 cut(s) | 1511, 1582, 1897 |
| SduI | GDGCHC | 1 cut(s) | 30 |
| SfaNI | GCATC | 6 cut(s) | 1116, 1159, 1246, 1353, 2050, 2569 |
| SfcI | CTRYAG | 1 cut(s) | 2756 |
| SinI | GGWCC | 1 cut(s) | 909 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1112, 1350 |
| SmlI | CTYRAG | 7 cut(s) | 80, 176, 242, 452, 1631, 2539, 2714 |
| SmoI | CTYRAG | 7 cut(s) | 80, 176, 242, 452, 1631, 2539, 2714 |
| SseBI | AGGCCT | 1 cut(s) | 2051 |
| SsiI | CCGC | 8 cut(s) | 85, 226, 739, 907, 973, 1028, 1057, 1916 |
| SspMI | CTAG | 7 cut(s) | 338, 500, 1089, 1148, 1820, 2319, 2705 |
| StuI | AGGCCT | 1 cut(s) | 2051 |
| StyD4I | CCNGG | 3 cut(s) | 1509, 1580, 1895 |
| TaaI | ACNGT | 3 cut(s) | 706, 1615, 2736 |
| TaqI | TCGA | 6 cut(s) | 8, 101, 154, 323, 361, 1859 |
| TatI | WGTACW | 6 cut(s) | 345, 462, 762, 1444, 1593, 2581 |
| TauI | GCSGC | 1 cut(s) | 975 |
| Tru1I | TTAA | 7 cut(s) | 89, 143, 1653, 1952, 1968, 2076, 2808 |
| Tru9I | TTAA | 7 cut(s) | 89, 143, 1653, 1952, 1968, 2076, 2808 |
| TscAI | CASTG | 3 cut(s) | 190, 1544, 1558 |
| TseFI | GTSAC | 3 cut(s) | 221, 800, 854 |
| TseI | GCWGC | 5 cut(s) | 119, 628, 904, 1706, 2758 |
| Tsp45I | GTSAC | 3 cut(s) | 221, 800, 854 |
| TspGWI | ACGGA | 2 cut(s) | 1730, 1997 |
| TspRI | CASTG | 3 cut(s) | 190, 1544, 1558 |
| VneI | GTGCAC | 1 cut(s) | 26 |
| VpaK11BI | GGWCC | 1 cut(s) | 909 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1622, 2075 |
| XapI | RAATTY | 6 cut(s) | 412, 1062, 1081, 1399, 2108, 2497 |
| XbaI | TCTAGA | 1 cut(s) | 337 |
| XceI | RCATGY | 1 cut(s) | 719 |
| XmiI | GTMKAC | 1 cut(s) | 1979 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1736 |
| XspI | CTAG | 7 cut(s) | 338, 500, 1089, 1148, 1820, 2319, 2705 |
| ZrmI | AGTACT | 1 cut(s) | 764 |
| Zsp2I | ATGCAT | 1 cut(s) | 2065 |