Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0008299

Physical Location & Seq

Genomic Coordinates Forward (+)

18941206 .. 18944045

Gene Structure 2840 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g24560.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2013 bp

ATGTGCAAGGGTTCTAAGAATACAGTTATATCCTCAAATTTCATCATGGAAAGTGAATTTCAGAAGCAGAATGGTGCTGGCCTGAATAAGTCATCGGTTTTGGTTGAGTTGTCCGCCTCGGACAATCTCGATGCTTTCAGGAGTGAAGTAGAGGAGAAAGGTCTCCATGTTGATGAGGCCAGCTTCTGGTATGGAAGAAGAATTGGGTCAAAGAAGATGGGGTTCGAAGAGAGGACACCGCTTATGATTGCTGCCATGTTTGGTAGCACCAAGGTTTTGAGGTATATAATCGAGTCTGGCAAGGTTGATGTCAATAGGTCTTGTGGTTCTGATAGGGTTACTGCCCTCCACTGTGCCACTGCTGGCGGTTCCTCTTCTTCGCTTGAGGTTGTCAAGCTCTTGCTTGATGCATCTGCTGATGCTAATTGTGTCAATGCTAATGGAAACAAACCCGTTGACTTGATTGCCCCTGCTTGGAAGTCTTCTTGCAACTTGAGAAGAAAGGCCATGGAGATGTTGTTGAAAGGTGATATGTCACTTTTGGGAAGTGATATTGATGATCAAGAAGTTCCAAGCCTTCAGTTGTTGAAAGAGGGAAGCGAGAAGAAAGAATATCCTATTGATATTGCATTGCCTGATATCAACAATGGGATTTATGGTTCAGATGAGTTCAGGATGTACACTTTCAAGGTGAAGCCATGCTCCAGGGCGTACTCTCATGACTGGACCGAGTGCCCTTTTGTTCACCCCGGTGAGAATGCAAGGAGGAGAGACCCCAGGAAGTATCCATACAGCTGTGTCCCCTGCCCAGAGTTCCGCAAAGGCTCGTGCCAGAAGGGAGACGTCTGTGAATATGCTCATGGTGTTTTTGAGTCCTGGCTGCATCCTGCTCAATACCGCACTCGTCTTTGCAAGGACGAGACCGGATGCACAAGGAAAGTGTGCTTCTTTGCTCACAAGCCTGAAGAGTTGCGCCCGGTGTATGCTTCCACGGGTTCAGCCATGCCTTCACCTAGGTCTATGTCAGCCTGCGCTGGAGATATGACAACCATGAGCCCATTAGCTCTTGGTTCACCATCTCTGTCCATGCCTACCACATCAACACCACCCATGTCTCCAATTGCATCTTCTTCTCCTAAAAATGGAGGTCTGTGGCAGAACAAAGTTAACCTAACCCCACCTGCCTTGCAGCTTCCGGGAAGCAGGCTAAAGAGTGCTTCAAGTGCTCGTGATTTGGACTTGGAGATGGAATTTCTAGGGCGTGATCACGCTAACCAACAACAACAGCAACAGCACATGTGGGATGAGATGTCTCGTCTCTCCTCTCCATCCTGCTATAATAACAGCAGGATGGGAGAGTTGAAGCCAACTAACCTTGATGATGTTTTTGGATCCTTTGATCCTTCTTTATTGTCCCAGTTGCAGGCACTCTCAACACAATCCCAGTTACAATCTTCACCTGGGCTTCAAAGTCGCCAAAACATGAACCAACTTCGTTCAAGTTACCCATCCAACTTGTCATCCTCTCCCGTGAGGAAGCCCTCTTCATTTGGGCTTGATTCACCTGCAGCATTGGCAGCCGCAGTTATAAATTCAAGGTCTGCTGCCTTTGCAAAGCGAAGTCATAGTTTCATTGACCGTGGAGCAGTAAACCATCTTCAAGGGTTTACATCGGCTGCTAACTCAAACACCATGATGTCGTCTTCGGATTGGAACTCACCTAGTGGGAAATTGGATTGGGGAATCCAAGGAGATGATCTGAACAAGCTGAGGAAGTCTGCTTCTTTTGGGTTCAGAAGCAACAATGCTGGATCACCAAACAACATGATGCAATCAGCTCTTGACGAGCCAGATGTGTCTTGGGTCAATTCTCTTGTGAAAGATGTTTCTTCCGAGAGGTCTGAGATGTTTGGTGCAGAGAGGCAGAACTATCGTCACCTGAACAAGGGGGTTCATGAAATGCTTCCGTCATGGGCGGAGCAGATGTATATAGAACAGGAGCAGAGGGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0006950 GO:0006952 GO:0008150 GO:0009266 GO:0009409 GO:0009605 GO:0009607 GO:0009620 GO:0009628 GO:0009889 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0042221 GO:0042493 GO:0043207 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0080090 GO:0098542 GO:0140110 GO:1901698 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank Ank_2 Ank_4 zf-CCCH

Protein Analysis

671

Amino Acids

73.74

Weight (kDa)

7.51

Isoelectric Point (pI)

63.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ank_2	PF12796	76 - 143	3.2e-10	Ankyrin repeats (3 copies)
Ank_4	PF13637	82 - 128	1.6e-06	Ankyrin repeats (many copies)
zf-CCCH_AtC3H23	PF25512	223 - 256	9e-21	AtC3H23-like, CCCH zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008299)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40140 AT2G40140 AT3G55980 AT3G55980
fragaria_vesca	FvH4_7g24560
malus_domestica	MD01G1154000.v1.1 MD07G1222900.v1.1
prunus_persica	Prupe.2G251000_v2.0.a1 Prupe.2G251000_v2.0.a1
pyrus_communis	pycom01g17130 pycom07g20150
rosa_chinensis	RchiOBHm_Chr1g0370401
rosa_laevigata	RLG00000027051
rosa_multiflora	Rmu_co8338923.1_g000001 Rmu_sc0005656.1_g000004
rosa_roxburghii	Rroxscaffold_4G00286610
rosa_rugosa	Rorug01G0356200
rosa_samantha	Rh1AG364600 Rh1BG327800 Rh1CG340800 Rh1DG358100
rosa_wichuraiana	Rw1G032080 Rw1G032130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1589
AarI	CACCTGC	2 cut(s)	1189, 1573
AatII	GACGTC	1 cut(s)	846
Acc36I	ACCTGC	2 cut(s)	1189, 1573
AccB7I	CCANNNNNTGG	1 cut(s)	186
AciI	CCGC	7 cut(s)	114, 239, 366, 817, 898, 1581, 1976
AclWI	GGATC	4 cut(s)	1386, 1394, 1399, 1819
AcsI	RAATTY	4 cut(s)	37, 56, 1250, 1591
AcuI	CTGAAG	2 cut(s)	563, 984
AcyI	GRCGYC	1 cut(s)	843
AdeI	CACNNNGTG	1 cut(s)	1724
AfaI	GTAC	2 cut(s)	680, 713
AfiI	CCNNNNNNNGG	5 cut(s)	186, 474, 1142, 1423, 1945
AflIII	ACRYGT	1 cut(s)	1296
AgsI	TTSAA	9 cut(s)	523, 589, 688, 1221, 1363, 1469, 1500, 1596, 1661
AjnI	CCWGG	4 cut(s)	704, 776, 875, 1459
AjuI	GAANNNNNNNTTGG	2 cut(s)	1111, 1143
AleI	CACNNNNGTG	1 cut(s)	750
AloI	GAACNNNNNNTCC	2 cut(s)	643, 675
AluBI	AGCT	7 cut(s)	183, 397, 795, 1064, 1192, 1768, 1838
AluI	AGCT	7 cut(s)	183, 397, 795, 1064, 1192, 1768, 1838
Alw21I	GWGCWC	1 cut(s)	1228
Alw26I	GTCTC	7 cut(s)	167, 765, 834, 914, 1119, 1317, 1322
AlwI	GGATC	4 cut(s)	1386, 1394, 1399, 1819
AlwNI	CAGNNNCTG	1 cut(s)	186
AoxI	GGCC	3 cut(s)	79, 177, 504
ApeKI	GCWGC	7 cut(s)	251, 880, 1189, 1568, 1577, 1604, 1676
ApoI	RAATTY	4 cut(s)	37, 56, 1250, 1591
Asp700I	GAANNNNTTC	1 cut(s)	1962
AspA2I	CCTAGG	1 cut(s)	1013
AspLEI	GCGC	2 cut(s)	975, 1034
AspS9I	GGNCC	1 cut(s)	726
AsuC2I	CCSGG	3 cut(s)	750, 977, 1197
AsuII	TTCGAA	1 cut(s)	225
AvaII	GGWCC	1 cut(s)	726
AvrII	CCTAGG	1 cut(s)	1013
BaeGI	GKGCMC	1 cut(s)	737
BamHI	GGATCC	1 cut(s)	1391
BanII	GRGCYC	1 cut(s)	1058
BarI	GAAGNNNNNNTAC	4 cut(s)	773, 805, 1641, 1673
BauI	CACGAG	2 cut(s)	826, 1227
BbsI	GAAGAC	2 cut(s)	474, 1695
Bbv12I	GWGCWC	1 cut(s)	1228
BbvCI	CCTCAGC	1 cut(s)	1769
BbvI	GCAGC	7 cut(s)	238, 867, 1201, 1580, 1589, 1591, 1663
BccI	CCATC	7 cut(s)	211, 1084, 1240, 1336, 1345, 1516, 1662
BcgI	CGANNNNNNTGC	2 cut(s)	1913, 1947
BciT130I	CCWGG	4 cut(s)	706, 778, 877, 1461
BciVI	GTATCC	1 cut(s)	795
BclI	TGATCA	2 cut(s)	559, 1264
BcnI	CCSGG	3 cut(s)	750, 977, 1197
BcoDI	GTCTC	7 cut(s)	167, 765, 834, 914, 1119, 1317, 1322
BfaI	CTAG	3 cut(s)	1014, 1256, 1722
BfmI	CTRYAG	1 cut(s)	1566
BfuAI	ACCTGC	2 cut(s)	1189, 1573
BfuI	GTATCC	1 cut(s)	795
BisI	GCNGC	8 cut(s)	252, 881, 1190, 1569, 1578, 1581, 1605, 1677
BlnI	CCTAGG	1 cut(s)	1013
BlsI	GCNGC	8 cut(s)	253, 882, 1191, 1570, 1579, 1582, 1606, 1678
Bme1390I	CCNGG	7 cut(s)	706, 750, 778, 877, 977, 1197, 1461
Bme18I	GGWCC	1 cut(s)	726
BmgT120I	GGNCC	1 cut(s)	726
BmiI	GGNNCC	2 cut(s)	370, 1393
BmrFI	CCNGG	7 cut(s)	706, 750, 778, 877, 977, 1197, 1461
BmrI	ACTGGG	2 cut(s)	1411, 1438
BmsI	GCATC	8 cut(s)	121, 397, 409, 419, 892, 917, 1133, 1818
BmuI	ACTGGG	2 cut(s)	1411, 1438
BpiI	GAAGAC	2 cut(s)	474, 1695
BpmI	CTGGAG	2 cut(s)	688, 1056
Bpu10I	CCTNAGC	1 cut(s)	1769
Bpu14I	TTCGAA	1 cut(s)	225
BpuEI	CTTGAG	2 cut(s)	404, 514
BpuMI	CCSGG	3 cut(s)	750, 977, 1197
BsaHI	GRCGYC	1 cut(s)	843
BsaI	GGTCTC	3 cut(s)	167, 765, 914
BsaWI	WCCGGW	1 cut(s)	923
BsaXI	ACNNNNNCTCC	4 cut(s)	503, 533, 1970, 2000
Bsc4I	CCNNNNNNNGG	5 cut(s)	186, 474, 1142, 1423, 1945
Bse1I	ACTGG	3 cut(s)	728, 1417, 1444
Bse3DI	GCAATG	1 cut(s)	629
BseBI	CCWGG	4 cut(s)	706, 778, 877, 1461
BseGI	GGATG	8 cut(s)	681, 883, 932, 1309, 1328, 1356, 1508, 1520
BseLI	CCNNNNNNNGG	5 cut(s)	186, 474, 1142, 1423, 1945
BseMI	GCAATG	1 cut(s)	629
BseMII	CTCAG	2 cut(s)	1760, 1893
BseNI	ACTGG	3 cut(s)	728, 1417, 1444
BseRI	GAGGAG	3 cut(s)	167, 781, 1312
BseSI	GKGCMC	1 cut(s)	737
BseXI	GCAGC	7 cut(s)	238, 867, 1201, 1580, 1589, 1591, 1663
BsgI	GTGCAG	1 cut(s)	1935
BshFI	GGCC	3 cut(s)	81, 179, 506
BsiHKAI	GWGCWC	1 cut(s)	1228
BsiSI	CCGG	4 cut(s)	750, 924, 977, 1196
BslFI	GGGAC	2 cut(s)	785, 1399
BslI	CCNNNNNNNGG	5 cut(s)	186, 474, 1142, 1423, 1945
BsmAI	GTCTC	7 cut(s)	167, 765, 834, 914, 1119, 1317, 1322
BsmBI	CGTCTC	2 cut(s)	834, 1322
BsmFI	GGGAC	2 cut(s)	785, 1399
BsmI	GAATGC	1 cut(s)	763
BsnI	GGCC	3 cut(s)	81, 179, 506
Bso31I	GGTCTC	3 cut(s)	167, 765, 914
Bsp119I	TTCGAA	1 cut(s)	225
Bsp1286I	GDGCHC	3 cut(s)	737, 1058, 1228
Bsp1407I	TGTACA	1 cut(s)	678
Bsp143I	GATC	6 cut(s)	559, 1264, 1391, 1399, 1756, 1811
Bsp19I	CCATGG	1 cut(s)	507
BspACI	CCGC	7 cut(s)	114, 239, 366, 817, 898, 1581, 1976
BspANI	GGCC	3 cut(s)	81, 179, 506
BspCNI	CTCAG	2 cut(s)	1761, 1894
BspHI	TCATGA	2 cut(s)	718, 1954
BspLI	GGNNCC	2 cut(s)	370, 1393
BspMAI	CTGCAG	1 cut(s)	1570
BspMI	ACCTGC	2 cut(s)	1189, 1573
BspPI	GGATC	4 cut(s)	1386, 1394, 1399, 1819
BspT104I	TTCGAA	1 cut(s)	225
BspTNI	GGTCTC	3 cut(s)	167, 765, 914
BsrDI	GCAATG	1 cut(s)	629
BsrGI	TGTACA	1 cut(s)	678
BsrI	ACTGG	3 cut(s)	728, 1417, 1444
BssMI	GATC	6 cut(s)	559, 1264, 1391, 1399, 1756, 1811
BssNI	GRCGYC	1 cut(s)	843
BssSI	CACGAG	2 cut(s)	826, 1227
BssT1I	CCWWGG	4 cut(s)	270, 507, 1013, 1747
Bst2BI	CACGAG	2 cut(s)	826, 1227
Bst2UI	CCWGG	4 cut(s)	706, 778, 877, 1461
Bst4CI	ACNGT	3 cut(s)	25, 353, 1640
Bst6I	CTCTTC	4 cut(s)	222, 379, 960, 1549
BstACI	GRCGYC	1 cut(s)	843
BstAUI	TGTACA	1 cut(s)	678
BstBI	TTCGAA	1 cut(s)	225
BstC8I	GCNNGC	6 cut(s)	79, 181, 364, 1030, 1205, 1425
BstDEI	CTNAG	3 cut(s)	15, 1769, 1902
BstDSI	CCRYGG	3 cut(s)	507, 990, 1639
BstENI	CCTNNNNNAGG	1 cut(s)	1943
BstF5I	GGATG	8 cut(s)	681, 883, 932, 1309, 1328, 1356, 1508, 1520
BstHHI	GCGC	2 cut(s)	975, 1034
BstKTI	GATC	6 cut(s)	562, 1267, 1394, 1402, 1759, 1814
BstMAI	GTCTC	7 cut(s)	167, 765, 834, 914, 1119, 1317, 1322
BstMBI	GATC	6 cut(s)	559, 1264, 1391, 1399, 1756, 1811
BstMWI	GCNNNNNNNGC	4 cut(s)	1223, 1574, 1577, 1610
BstNI	CCWGG	4 cut(s)	706, 778, 877, 1461
BstNSI	RCATGY	1 cut(s)	1300
BstSCI	CCNGG	7 cut(s)	704, 748, 776, 875, 975, 1195, 1459
BstSFI	CTRYAG	1 cut(s)	1566
BstSLI	GKGCMC	1 cut(s)	737
BstV1I	GCAGC	7 cut(s)	238, 867, 1201, 1580, 1589, 1591, 1663
BstV2I	GAAGAC	2 cut(s)	474, 1695
BstX2I	RGATCY	1 cut(s)	1391
BstYI	RGATCY	1 cut(s)	1391
BsuI	GTATCC	1 cut(s)	795
BsuRI	GGCC	3 cut(s)	81, 179, 506
BtgI	CCRYGG	3 cut(s)	507, 990, 1639
BtsCI	GGATG	8 cut(s)	681, 883, 932, 1309, 1328, 1356, 1508, 1520
BtsI	GCAGTG	1 cut(s)	357
BtsIMutI	CAGTG	2 cut(s)	349, 357
BveI	ACCTGC	2 cut(s)	1189, 1573
Cac8I	GCNNGC	6 cut(s)	79, 181, 364, 1030, 1205, 1425
CaiI	CAGNNNCTG	1 cut(s)	186
CciI	TCATGA	2 cut(s)	718, 1954
CfoI	GCGC	2 cut(s)	975, 1034
Cfr13I	GGNCC	1 cut(s)	726
Csp6I	GTAC	2 cut(s)	679, 712
CspCI	CAANNNNNGTGG	2 cut(s)	1167, 1202
CviQI	GTAC	2 cut(s)	679, 712
DdeI	CTNAG	3 cut(s)	15, 1769, 1902
DpnI	GATC	6 cut(s)	561, 1266, 1393, 1401, 1758, 1813
DpnII	GATC	6 cut(s)	559, 1264, 1391, 1399, 1756, 1811
DraIII	CACNNNGTG	1 cut(s)	1724
Eam1104I	CTCTTC	4 cut(s)	222, 379, 960, 1549
EarI	CTCTTC	4 cut(s)	222, 379, 960, 1549
EciI	GGCGGA	2 cut(s)	103, 1991
Eco130I	CCWWGG	4 cut(s)	270, 507, 1013, 1747
Eco24I	GRGCYC	1 cut(s)	1058
Eco31I	GGTCTC	3 cut(s)	167, 765, 914
Eco32I	GATATC	1 cut(s)	640
Eco47I	GGWCC	1 cut(s)	726
Eco57I	CTGAAG	2 cut(s)	563, 984
EcoNI	CCTNNNNNAGG	1 cut(s)	1943
EcoRII	CCWGG	4 cut(s)	704, 776, 875, 1459
EcoRV	GATATC	1 cut(s)	640
EcoT14I	CCWWGG	4 cut(s)	270, 507, 1013, 1747
EcoT22I	ATGCAT	1 cut(s)	412
EcoT38I	GRGCYC	1 cut(s)	1058
ErhI	CCWWGG	4 cut(s)	270, 507, 1013, 1747
Esp3I	CGTCTC	2 cut(s)	834, 1322
FaqI	GGGAC	2 cut(s)	785, 1399
FbaI	TGATCA	2 cut(s)	559, 1264
Fnu4HI	GCNGC	8 cut(s)	252, 881, 1190, 1569, 1578, 1581, 1605, 1677
FokI	GGATG	8 cut(s)	688, 870, 939, 1315, 1316, 1363, 1495, 1507
FriOI	GRGCYC	1 cut(s)	1058
Fsp4HI	GCNGC	8 cut(s)	252, 881, 1190, 1569, 1578, 1581, 1605, 1677
FspBI	CTAG	3 cut(s)	1014, 1256, 1722
GlaI	GCGC	2 cut(s)	974, 1033
GluI	GCNGC	8 cut(s)	252, 881, 1190, 1569, 1578, 1581, 1605, 1677
GsuI	CTGGAG	2 cut(s)	688, 1056
HaeIII	GGCC	3 cut(s)	81, 179, 506
HapII	CCGG	4 cut(s)	750, 924, 977, 1196
HhaI	GCGC	2 cut(s)	975, 1034
Hin1I	GRCGYC	1 cut(s)	843
Hin6I	GCGC	2 cut(s)	973, 1032
HinP1I	GCGC	2 cut(s)	973, 1032
HincII	GTYRAC	2 cut(s)	457, 1168
HindII	GTYRAC	2 cut(s)	457, 1168
HinfI	GANTC	4 cut(s)	293, 872, 1559, 1743
HpaI	GTTAAC	1 cut(s)	1168
HpaII	CCGG	4 cut(s)	750, 924, 977, 1196
Hpy166II	GTNNAC	7 cut(s)	457, 681, 745, 1073, 1168, 1651, 1668
Hpy188I	TCNGA	9 cut(s)	63, 121, 331, 664, 1708, 1761, 1796, 1894, 1903
Hpy188III	TCNNGA	8 cut(s)	128, 139, 563, 673, 719, 1229, 1841, 1955
Hpy8I	GTNNAC	7 cut(s)	457, 681, 745, 1073, 1168, 1651, 1668
HpyAV	CCTTC	4 cut(s)	587, 829, 1017, 1413
HpyCH4III	ACNGT	3 cut(s)	25, 353, 1640
HpyCH4IV	ACGT	1 cut(s)	843
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1223, 1574, 1577, 1610
HpyF3I	CTNAG	3 cut(s)	15, 1769, 1902
HpySE526I	ACGT	1 cut(s)	843
Hsp92I	GRCGYC	1 cut(s)	843
HspAI	GCGC	2 cut(s)	973, 1032
Ksp22I	TGATCA	2 cut(s)	559, 1264
KspAI	GTTAAC	1 cut(s)	1168
Kzo9I	GATC	6 cut(s)	559, 1264, 1391, 1399, 1756, 1811
LmnI	GCTCC	4 cut(s)	707, 1643, 1978, 1999
Lsp1109I	GCAGC	7 cut(s)	238, 867, 1201, 1580, 1589, 1591, 1663
LweI	GCATC	8 cut(s)	121, 397, 409, 419, 892, 917, 1133, 1818
MaeI	CTAG	3 cut(s)	1014, 1256, 1722
MaeII	ACGT	1 cut(s)	843
MaeIII	GTNAC	5 cut(s)	337, 534, 1446, 1502, 1934
MalI	GATC	6 cut(s)	561, 1266, 1393, 1401, 1758, 1813
MboI	GATC	6 cut(s)	559, 1264, 1391, 1399, 1756, 1811
MfeI	CAATTG	1 cut(s)	1119
MflI	RGATCY	1 cut(s)	1391
MhlI	GDGCHC	3 cut(s)	737, 1058, 1228
MluCI	AATT	9 cut(s)	37, 56, 201, 424, 1119, 1250, 1591, 1730, 1867
MlyI	GAGTC	2 cut(s)	302, 881
MmeI	TCCRAC	1 cut(s)	1536
Mph1103I	ATGCAT	1 cut(s)	412
MroXI	GAANNNNTTC	1 cut(s)	1962
MseI	TTAA	1 cut(s)	1167
MslI	CAYNNNNRTG	4 cut(s)	171, 512, 750, 1694
MspA1I	CMGCKG	1 cut(s)	795
MspI	CCGG	4 cut(s)	750, 924, 977, 1196
MspR9I	CCNGG	7 cut(s)	706, 750, 778, 877, 977, 1197, 1461
MunI	CAATTG	1 cut(s)	1119
Mva1269I	GAATGC	1 cut(s)	763
MvaI	CCWGG	4 cut(s)	706, 778, 877, 1461
MwoI	GCNNNNNNNGC	4 cut(s)	1223, 1574, 1577, 1610
NciI	CCSGG	3 cut(s)	750, 977, 1197
NcoI	CCATGG	1 cut(s)	507
NdeII	GATC	6 cut(s)	559, 1264, 1391, 1399, 1756, 1811
NlaIV	GGNNCC	2 cut(s)	370, 1393
NmuCI	GTSAC	2 cut(s)	534, 1934
NsiI	ATGCAT	1 cut(s)	412
NspI	RCATGY	1 cut(s)	1300
NspV	TTCGAA	1 cut(s)	225
OliI	CACNNNNGTG	1 cut(s)	750
PagI	TCATGA	2 cut(s)	718, 1954
PaqCI	CACCTGC	2 cut(s)	1189, 1573
PciI	ACATGT	1 cut(s)	1296
PctI	GAATGC	1 cut(s)	763
PdmI	GAANNNNTTC	1 cut(s)	1962
PfeI	GAWTC	2 cut(s)	1559, 1743
PflMI	CCANNNNNTGG	1 cut(s)	186
PfoI	TCCNGGA	1 cut(s)	1195
PkrI	GCNGC	8 cut(s)	253, 882, 1191, 1570, 1579, 1582, 1606, 1678
PleI	GAGTC	2 cut(s)	301, 880
PpsI	GAGTC	2 cut(s)	301, 880
PscI	ACATGT	1 cut(s)	1296
PsiI	TTATAA	1 cut(s)	1589
Psp6I	CCWGG	4 cut(s)	704, 776, 875, 1459
PspGI	CCWGG	4 cut(s)	704, 776, 875, 1459
PspN4I	GGNNCC	2 cut(s)	370, 1393
PspPI	GGNCC	1 cut(s)	726
PstI	CTGCAG	1 cut(s)	1570
PstNI	CAGNNNCTG	1 cut(s)	186
PsuI	RGATCY	1 cut(s)	1391
PvuII	CAGCTG	1 cut(s)	795
RsaI	GTAC	2 cut(s)	680, 713
RsaNI	GTAC	2 cut(s)	679, 712
RseI	CAYNNNNRTG	4 cut(s)	171, 512, 750, 1694
SaqAI	TTAA	1 cut(s)	1167
SatI	GCNGC	8 cut(s)	252, 881, 1190, 1569, 1578, 1581, 1605, 1677
Sau3AI	GATC	6 cut(s)	559, 1264, 1391, 1399, 1756, 1811
Sau96I	GGNCC	1 cut(s)	726
SchI	GAGTC	2 cut(s)	302, 881
ScrFI	CCNGG	7 cut(s)	706, 750, 778, 877, 977, 1197, 1461
SduI	GDGCHC	3 cut(s)	737, 1058, 1228
SfaNI	GCATC	8 cut(s)	121, 397, 409, 419, 892, 917, 1133, 1818
SfcI	CTRYAG	1 cut(s)	1566
SfuI	TTCGAA	1 cut(s)	225
SinI	GGWCC	1 cut(s)	726
SmiMI	CAYNNNNRTG	4 cut(s)	171, 512, 750, 1694
SmlI	CTYRAG	2 cut(s)	383, 493
SmoI	CTYRAG	2 cut(s)	383, 493
Sse9I	AATT	9 cut(s)	37, 56, 201, 424, 1119, 1250, 1591, 1730, 1867
SsiI	CCGC	7 cut(s)	114, 239, 366, 817, 898, 1581, 1976
SspMI	CTAG	3 cut(s)	1014, 1256, 1722
StyD4I	CCNGG	7 cut(s)	704, 748, 776, 875, 975, 1195, 1459
StyI	CCWWGG	4 cut(s)	270, 507, 1013, 1747
TaaI	ACNGT	3 cut(s)	25, 353, 1640
TaiI	ACGT	1 cut(s)	846
TaqI	TCGA	3 cut(s)	129, 225, 291
TaqII	GACCGA	1 cut(s)	743
TasI	AATT	9 cut(s)	37, 56, 201, 424, 1119, 1250, 1591, 1730, 1867
TatI	WGTACW	1 cut(s)	678
TauI	GCSGC	1 cut(s)	1583
TfiI	GAWTC	2 cut(s)	1559, 1743
Tru1I	TTAA	1 cut(s)	1167
Tru9I	TTAA	1 cut(s)	1167
TscAI	CASTG	2 cut(s)	356, 364
TseFI	GTSAC	2 cut(s)	534, 1934
TseI	GCWGC	7 cut(s)	251, 880, 1189, 1568, 1577, 1604, 1676
Tsp45I	GTSAC	2 cut(s)	534, 1934
TspDTI	ATGAA	6 cut(s)	31, 1499, 1536, 1621, 1943, 1971
TspGWI	ACGGA	1 cut(s)	1956
TspRI	CASTG	2 cut(s)	356, 364
Van91I	CCANNNNNTGG	1 cut(s)	186
VpaK11BI	GGWCC	1 cut(s)	726
XagI	CCTNNNNNAGG	1 cut(s)	1943
XapI	RAATTY	4 cut(s)	37, 56, 1250, 1591
XceI	RCATGY	1 cut(s)	1300
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1857
XmaJI	CCTAGG	1 cut(s)	1013
XmnI	GAANNNNTTC	1 cut(s)	1962
XspI	CTAG	3 cut(s)	1014, 1256, 1722
ZraI	GACGTC	1 cut(s)	844
Zsp2I	ATGCAT	1 cut(s)	412

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.