Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0008299

Physical Location & Seq

Genomic Coordinates Forward (+)

29992816 .. 29995962

Gene Structure 3147 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1222900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1965 bp

ATGGAAAGCGAATTCCAGAAGCAGAAATCGGTTTTGGTCGAATTGTCCGCCTCGGACAATCTCGATGCTTTCAGGACTGAAGTAGAAGAGAAGGGTTTCCATGTTGACGAGGCTGGCTTTTGGTATGGAAGAAGAATCGGGTCAAAGCAGATGGGGTTCGAAGATAGGACGCCGCTTATGATTGCTGCCATGTTTGGTAGCACTAAGGTTTTGAAGTATATAATTGAGTCTGGGATGGTTGATGTCAACAGGTCCTGCGGTTCAGATAGGGTCACTGCCCTTCACTGTGCCGCTGCTGGCGGTTCCACTGCTTCACTTGAGGTTGTCAAGCTCTTGCTTGATGCTTCCGCTGATGCTAATTGCGTCAATGCCTACGGAAACAGGCCCGTTGACTTGATTGCCCCGGCTTTGAAGTCGCCCTGCAGCTCAAGAAGGAAGGCCATGGAGATGCTGTTGAGAGGTGATAAGTCGGTTATGGAAAGCGATCAGATTGCTATCGAAGAGGGAGACCAACGGAAGGTATCGAGCCCCCAGATGCCGAAAGAGGGAAGTGATAAGAAAGAATATCCTATTGATATTTCATTGCCTGATATCAACAATGGGATATATGGTACAGATGAGTTCAGAATGTTCACTTTCAAGGTGAAGCCGTGCTCGAGGGCCTACTCTCATGACTGGACAGAGTGCCCTTTTGTTCATCCAGGCGAAAACGCAAGGAGGAGAGACCCAAAAAAGTACCCATACAGCTGTGTTCCCTGCCCCGAGTTCCGCAAAGGATCGTGCCAGAAGGGAGATGCTTGCGAGTATGCTCATGGTGTCTTTGAGTCCTGGCTTCATCCTGCTCAGTATCGAACCCGCCTTTGCAAAGATGAAACCGGTTGCACGAGGAAAGTGTGTTTCTTTGCTCACAGACCCGAAGAACTACGCCCGGTGTATGCTTCTACGGGTTCAGCCATGCCTTCACCAAGGTCAATGTCAGTCAGTGCTGCAGACATGGCAACCCTGAGCCCGTTAGCTCTAGGTTCATCAGCTATGTCTATGCCAATTACATCAACACCGCCCATGTCTCCACTGGCAGCCGCTTCTTCTCCTAAAAATGGAGGTTTGTGGCAGAACAAAGTTAGCCTCACCCCGCCTACCTTGCAGCTTCCCGGTAGCAGGCTAAAGAGCGCGTGTAGTGCCCGAGATTTGGAGTTGGAGATGGAATTGCTAGGACTAGATAGTCATTCAAGCCAACAACACCAGCAACACCAGCAACAGCAGTTGTGGGATGAGATATCTCGTCTCTCCTCCTCACCGCCCTACAGCAGGCTTGGAGAATTGAAGCCAACTAACCTTGAGGATGCTTTTGGATCCTTCGATCCTTCTTTGTTGTCTCAATTGCAGGCACACTCTCAAAAGCCTTCAACACCAACCCATCGCCAAAACATGAACCAGCTTCGTTCGAGTTACCCAACCAACTTGTCATCCTCTCCGGTGAGGAAGCCCTCATCATTCGGGCTTGACTCACCCAGTGCTCTTGCAGCAGCCGTTATGAATTCCAGGTCCGCTGCATTTGCACAACAGCGGAGCCAGAGTTTCATTGACCGCGGAGCAATGAACCATCTTTCCGGGCTTAATGCCCCAGTTAATTCTTCCACCATGAGGCAGTCTTCAGATTGGAGCTCACCTGGTGGGAAATTGGATTGGGGAATTCAAGGAGATGAGCTGAACAAGCTGAAGAAGTCTGCTTCATTCGGGTTCCGAAGTAACAATGCCGGAACACCACCTGGCTTTAAGCCATCGGCAGTTGACGAGCCGGATGTCTCTTGGGTCAATTCCCTGGTTAAAGACGTTTCTTCTGAGCGGTCCGAGCTGTTTGTTGCAGACAACAAGCAAAGGTATCGTCACCTCAGCAACGGGGCCCACGAAATGCTGCCGTCATGGGTGGAGCAGATGTACATAGAACAAGAGCAGAGGGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0006950 GO:0006952 GO:0008150 GO:0009266 GO:0009409 GO:0009605 GO:0009607 GO:0009620 GO:0009628 GO:0009889 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0042221 GO:0042493 GO:0043207 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0080090 GO:0098542 GO:0140110 GO:1901698 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank Ank_2 Ank_4 zf-CCCH

Protein Analysis

655

Amino Acids

72.01

Weight (kDa)

7.21

Isoelectric Point (pI)

58.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ank_2	PF12796	54 - 121	1.3e-10	Ankyrin repeats (3 copies)
Ank_4	PF13637	60 - 106	1.6e-06	Ankyrin repeats (many copies)
zf-CCCH_AtC3H23	PF25512	207 - 240	1.8e-20	AtC3H23-like, CCCH zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008299)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40140 AT2G40140 AT3G55980 AT3G55980
fragaria_vesca	FvH4_7g24560
malus_domestica	MD01G1154000.v1.1 MD07G1222900.v1.1
prunus_persica	Prupe.2G251000_v2.0.a1 Prupe.2G251000_v2.0.a1
pyrus_communis	pycom01g17130 pycom07g20150
rosa_chinensis	RchiOBHm_Chr1g0370401
rosa_laevigata	RLG00000027051
rosa_multiflora	Rmu_co8338923.1_g000001 Rmu_sc0005656.1_g000004
rosa_roxburghii	Rroxscaffold_4G00286610
rosa_rugosa	Rorug01G0356200
rosa_samantha	Rh1AG364600 Rh1BG327800 Rh1CG340800 Rh1DG358100
rosa_wichuraiana	Rw1G032080 Rw1G032130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1221
AccBSI	CCGCTC	1 cut(s)	1846
AccII	CGCG	2 cut(s)	1172, 1590
AclWI	GGATC	4 cut(s)	784, 1347, 1355, 1360
AcsI	RAATTY	3 cut(s)	11, 1537, 1692
AcuI	CTGAAG	3 cut(s)	99, 1638, 1739
AcyI	GRCGYC	1 cut(s)	170
AdeI	CACNNNGTG	2 cut(s)	1514, 1673
AfaI	GTAC	3 cut(s)	613, 737, 1940
AfiI	CCNNNNNNNGG	7 cut(s)	517, 545, 1097, 1158, 1189, 1308, 1644
AgeI	ACCGGT	1 cut(s)	875
AgsI	TTSAA	7 cut(s)	214, 412, 640, 1230, 1324, 1407, 1697
AjnI	CCWGG	6 cut(s)	700, 827, 1541, 1669, 1768, 1821
AjuI	GAANNNNNNNTTGG	2 cut(s)	17, 49
AloI	GAACNNNNNNTCC	2 cut(s)	1592, 1624
Alw21I	GWGCWC	3 cut(s)	656, 1519, 1667
Alw26I	GTCTC	6 cut(s)	501, 717, 1071, 1289, 1380, 1810
AlwI	GGATC	4 cut(s)	784, 1347, 1355, 1360
AlwNI	CAGNNNCTG	1 cut(s)	255
Ama87I	CYCGRG	3 cut(s)	655, 761, 1182
AoxI	GGCC	4 cut(s)	383, 438, 660, 1902
ApaI	GGGCCC	1 cut(s)	1906
ApoI	RAATTY	3 cut(s)	11, 1537, 1692
ArsI	GACNNNNNNTTYG	2 cut(s)	1870, 1902
AsiGI	ACCGGT	1 cut(s)	875
Asp700I	GAANNNNTTC	1 cut(s)	95
AspLEI	GCGC	1 cut(s)	1172
AspS9I	GGNCC	7 cut(s)	252, 384, 660, 1545, 1848, 1902, 1903
AsuC2I	CCSGG	4 cut(s)	404, 929, 1152, 1612
AsuHPI	GGTGA	9 cut(s)	473, 655, 954, 1120, 1287, 1489, 1500, 1659, 1880
AsuII	TTCGAA	1 cut(s)	159
AvaI	CYCGRG	3 cut(s)	655, 761, 1182
AvaII	GGWCC	3 cut(s)	252, 1545, 1848
BaeGI	GKGCMC	3 cut(s)	689, 1183, 1906
BamHI	GGATCC	1 cut(s)	1352
BanII	GRGCYC	4 cut(s)	530, 1010, 1667, 1906
BauI	CACGAG	1 cut(s)	883
BbsI	GAAGAC	1 cut(s)	1644
Bbv12I	GWGCWC	3 cut(s)	656, 1519, 1667
BbvCI	CCTCAGC	1 cut(s)	1892
BccI	CCATC	6 cut(s)	145, 229, 1195, 1425, 1611, 1789
BceAI	ACGGC	3 cut(s)	634, 1514, 1903
BcgI	CGANNNNNNTGC	4 cut(s)	473, 507, 1865, 1899
BciT130I	CCWGG	6 cut(s)	702, 829, 1543, 1671, 1770, 1823
BcnI	CCSGG	4 cut(s)	404, 929, 1152, 1612
BcoDI	GTCTC	6 cut(s)	501, 717, 1071, 1289, 1380, 1810
BfaI	CTAG	3 cut(s)	1019, 1211, 1217
BfmI	CTRYAG	3 cut(s)	421, 987, 1303
Bme18I	GGWCC	3 cut(s)	252, 1545, 1848
BmeT110I	CYCGRG	3 cut(s)	655, 761, 1182
BmgT120I	GGNCC	7 cut(s)	252, 384, 660, 1545, 1848, 1902, 1903
BmiI	GGNNCC	6 cut(s)	304, 1354, 1571, 1742, 1903, 1904
BmrI	ACTGGG	2 cut(s)	1506, 1619
BmsI	GCATC	7 cut(s)	55, 331, 343, 438, 525, 784, 1333
BmuI	ACTGGG	2 cut(s)	1506, 1619
BpiI	GAAGAC	1 cut(s)	1644
Bpu10I	CCTNAGC	2 cut(s)	1004, 1892
Bpu14I	TTCGAA	1 cut(s)	159
BpuEI	CTTGAG	3 cut(s)	338, 412, 1358
BpuMI	CCSGG	4 cut(s)	404, 929, 1152, 1612
BsaBI	GATNNNNATC	1 cut(s)	494
BsaHI	GRCGYC	1 cut(s)	170
BsaI	GGTCTC	2 cut(s)	501, 717
BsaJI	CCNNGG	6 cut(s)	51, 402, 441, 965, 1588, 1821
BsaWI	WCCGGW	2 cut(s)	875, 1474
BsaXI	ACNNNNNCTCC	6 cut(s)	437, 467, 1561, 1591, 1922, 1952
Bsc4I	CCNNNNNNNGG	7 cut(s)	517, 545, 1097, 1158, 1189, 1308, 1644
Bse118I	RCCGGY	1 cut(s)	875
Bse1I	ACTGG	4 cut(s)	680, 1077, 1512, 1625
Bse3DI	GCAATG	2 cut(s)	581, 1602
Bse8I	GATNNNNATC	1 cut(s)	494
BseBI	CCWGG	6 cut(s)	702, 829, 1543, 1671, 1770, 1823
BseDI	CCNNGG	6 cut(s)	51, 402, 441, 965, 1588, 1821
BseGI	GGATG	7 cut(s)	240, 697, 835, 1276, 1348, 1466, 1807
BseJI	GATNNNNATC	1 cut(s)	494
BseLI	CCNNNNNNNGG	7 cut(s)	517, 545, 1097, 1158, 1189, 1308, 1644
BseMI	GCAATG	2 cut(s)	581, 1602
BseMII	CTCAG	4 cut(s)	857, 995, 1833, 1906
BseNI	ACTGG	4 cut(s)	680, 1077, 1512, 1625
BseRI	GAGGAG	3 cut(s)	733, 1279, 1282
BseSI	GKGCMC	3 cut(s)	689, 1183, 1906
Bsh1236I	CGCG	2 cut(s)	1172, 1590
BshFI	GGCC	4 cut(s)	385, 440, 662, 1904
BshTI	ACCGGT	1 cut(s)	875
BsiHKAI	GWGCWC	3 cut(s)	656, 1519, 1667
BsiHKCI	CYCGRG	3 cut(s)	655, 761, 1182
BsiSI	CCGG	8 cut(s)	404, 876, 929, 1152, 1475, 1611, 1758, 1799
BslI	CCNNNNNNNGG	7 cut(s)	517, 545, 1097, 1158, 1189, 1308, 1644
BsmAI	GTCTC	6 cut(s)	501, 717, 1071, 1289, 1380, 1810
BsmBI	CGTCTC	1 cut(s)	1289
BsnI	GGCC	4 cut(s)	385, 440, 662, 1904
Bso31I	GGTCTC	2 cut(s)	501, 717
BsoBI	CYCGRG	3 cut(s)	655, 761, 1182
Bsp119I	TTCGAA	1 cut(s)	159
Bsp120I	GGGCCC	1 cut(s)	1902
Bsp1286I	GDGCHC	8 cut(s)	530, 656, 689, 1010, 1183, 1519, 1667, 1906
Bsp1407I	TGTACA	1 cut(s)	1938
Bsp143I	GATC	4 cut(s)	484, 776, 1352, 1360
Bsp19I	CCATGG	1 cut(s)	441
BspANI	GGCC	4 cut(s)	385, 440, 662, 1904
BspCNI	CTCAG	4 cut(s)	856, 996, 1834, 1905
BspFNI	CGCG	2 cut(s)	1172, 1590
BspHI	TCATGA	1 cut(s)	670
BspLI	GGNNCC	6 cut(s)	304, 1354, 1571, 1742, 1903, 1904
BspMAI	CTGCAG	2 cut(s)	425, 991
BspPI	GGATC	4 cut(s)	784, 1347, 1355, 1360
BspT104I	TTCGAA	1 cut(s)	159
BspTNI	GGTCTC	2 cut(s)	501, 717
BsrBI	CCGCTC	1 cut(s)	1846
BsrDI	GCAATG	2 cut(s)	581, 1602
BsrFI	RCCGGY	1 cut(s)	875
BsrGI	TGTACA	1 cut(s)	1938
BsrI	ACTGG	4 cut(s)	680, 1077, 1512, 1625
BssAI	RCCGGY	1 cut(s)	875
BssECI	CCNNGG	6 cut(s)	51, 402, 441, 965, 1588, 1821
BssMI	GATC	4 cut(s)	484, 776, 1352, 1360
BssNI	GRCGYC	1 cut(s)	170
BssSI	CACGAG	1 cut(s)	883
BssT1I	CCWWGG	2 cut(s)	441, 965
Bst2BI	CACGAG	1 cut(s)	883
Bst2UI	CCWGG	6 cut(s)	702, 829, 1543, 1671, 1770, 1823
Bst4CI	ACNGT	1 cut(s)	287
Bst6I	CTCTTC	2 cut(s)	81, 495
BstACI	GRCGYC	1 cut(s)	170
BstAUI	TGTACA	1 cut(s)	1938
BstBI	TTCGAA	1 cut(s)	159
BstC8I	GCNNGC	6 cut(s)	115, 298, 799, 1160, 1310, 1386
BstDEI	CTNAG	5 cut(s)	204, 843, 1004, 1842, 1892
BstDSI	CCRYGG	2 cut(s)	441, 1588
BstENI	CCTNNNNNAGG	1 cut(s)	1306
BstF5I	GGATG	7 cut(s)	240, 697, 835, 1276, 1348, 1466, 1807
BstFNI	CGCG	2 cut(s)	1172, 1590
BstHHI	GCGC	1 cut(s)	1172
BstKTI	GATC	4 cut(s)	487, 779, 1355, 1363
BstMAI	GTCTC	6 cut(s)	501, 717, 1071, 1289, 1380, 1810
BstMBI	GATC	4 cut(s)	484, 776, 1352, 1360
BstMWI	GCNNNNNNNGC	8 cut(s)	995, 1141, 1178, 1252, 1523, 1556, 1714, 1852
BstNI	CCWGG	6 cut(s)	702, 829, 1543, 1671, 1770, 1823
BstSFI	CTRYAG	3 cut(s)	421, 987, 1303
BstSLI	GKGCMC	3 cut(s)	689, 1183, 1906
BstUI	CGCG	2 cut(s)	1172, 1590
BstV2I	GAAGAC	1 cut(s)	1644
BstX2I	RGATCY	1 cut(s)	1352
BstYI	RGATCY	1 cut(s)	1352
BsuRI	GGCC	4 cut(s)	385, 440, 662, 1904
BtgI	CCRYGG	2 cut(s)	441, 1588
BtgZI	GCGATG	1 cut(s)	1403
BtsCI	GGATG	7 cut(s)	240, 697, 835, 1276, 1348, 1466, 1807
BtsI	GCAGTG	2 cut(s)	273, 306
BtsIMutI	CAGTG	6 cut(s)	273, 283, 306, 988, 1070, 1519
Cac8I	GCNNGC	6 cut(s)	115, 298, 799, 1160, 1310, 1386
CaiI	CAGNNNCTG	1 cut(s)	255
CciI	TCATGA	1 cut(s)	670
CfoI	GCGC	1 cut(s)	1172
Cfr10I	RCCGGY	1 cut(s)	875
Cfr13I	GGNCC	7 cut(s)	252, 384, 660, 1545, 1848, 1902, 1903
Cfr42I	CCGCGG	1 cut(s)	1591
CpoI	CGGWCCG	1 cut(s)	1848
CseI	GACGC	2 cut(s)	178, 352
CsiI	ACCWGGT	1 cut(s)	1669
Csp6I	GTAC	3 cut(s)	612, 736, 1939
CspAI	ACCGGT	1 cut(s)	875
CspI	CGGWCCG	1 cut(s)	1848
CviQI	GTAC	3 cut(s)	612, 736, 1939
DdeI	CTNAG	5 cut(s)	204, 843, 1004, 1842, 1892
DpnI	GATC	4 cut(s)	486, 778, 1354, 1362
DpnII	GATC	4 cut(s)	484, 776, 1352, 1360
DraIII	CACNNNGTG	2 cut(s)	1514, 1673
DrdI	GACNNNNNNGTC	1 cut(s)	1221
DseDI	GACNNNNNNGTC	1 cut(s)	1221
Eam1104I	CTCTTC	2 cut(s)	81, 495
EarI	CTCTTC	2 cut(s)	81, 495
EciI	GGCGGA	1 cut(s)	37
Ecl136II	GAGCTC	1 cut(s)	1665
Eco130I	CCWWGG	2 cut(s)	441, 965
Eco24I	GRGCYC	4 cut(s)	530, 1010, 1667, 1906
Eco31I	GGTCTC	2 cut(s)	501, 717
Eco32I	GATATC	2 cut(s)	592, 1278
Eco47I	GGWCC	3 cut(s)	252, 1545, 1848
Eco53kI	GAGCTC	1 cut(s)	1665
Eco57I	CTGAAG	3 cut(s)	99, 1638, 1739
Eco88I	CYCGRG	3 cut(s)	655, 761, 1182
EcoICRI	GAGCTC	1 cut(s)	1665
EcoNI	CCTNNNNNAGG	1 cut(s)	1306
EcoO109I	RGGNCCY	3 cut(s)	252, 660, 1902
EcoRI	GAATTC	3 cut(s)	11, 1537, 1692
EcoRII	CCWGG	6 cut(s)	700, 827, 1541, 1669, 1768, 1821
EcoRV	GATATC	2 cut(s)	592, 1278
EcoT14I	CCWWGG	2 cut(s)	441, 965
EcoT38I	GRGCYC	4 cut(s)	530, 1010, 1667, 1906
ErhI	CCWWGG	2 cut(s)	441, 965
Esp3I	CGTCTC	1 cut(s)	1289
FauI	CCCGC	2 cut(s)	863, 1140
FokI	GGATG	7 cut(s)	247, 684, 822, 1283, 1355, 1453, 1814
FriOI	GRGCYC	4 cut(s)	530, 1010, 1667, 1906
FspBI	CTAG	3 cut(s)	1019, 1211, 1217
GlaI	GCGC	1 cut(s)	1171
HaeIII	GGCC	4 cut(s)	385, 440, 662, 1904
HapII	CCGG	8 cut(s)	404, 876, 929, 1152, 1475, 1611, 1758, 1799
HgaI	GACGC	2 cut(s)	178, 352
HhaI	GCGC	1 cut(s)	1172
Hin1I	GRCGYC	1 cut(s)	170
Hin6I	GCGC	1 cut(s)	1170
HinP1I	GCGC	1 cut(s)	1170
HincII	GTYRAC	4 cut(s)	106, 247, 391, 1792
HindII	GTYRAC	4 cut(s)	106, 247, 391, 1792
HinfI	GANTC	4 cut(s)	135, 227, 824, 1505
HpaII	CCGG	8 cut(s)	404, 876, 929, 1152, 1475, 1611, 1758, 1799
HphI	GGTGA	9 cut(s)	473, 655, 954, 1120, 1287, 1489, 1500, 1659, 1880
Hpy166II	GTNNAC	5 cut(s)	106, 247, 391, 633, 1792
Hpy188I	TCNGA	8 cut(s)	55, 265, 489, 626, 1657, 1745, 1843, 1852
Hpy188III	TCNNGA	5 cut(s)	16, 62, 73, 429, 671
Hpy8I	GTNNAC	5 cut(s)	106, 247, 391, 633, 1792
HpyCH4III	ACNGT	1 cut(s)	287
HpyCH4IV	ACGT	1 cut(s)	1833
HpyF10VI	GCNNNNNNNGC	8 cut(s)	995, 1141, 1178, 1252, 1523, 1556, 1714, 1852
HpyF3I	CTNAG	5 cut(s)	204, 843, 1004, 1842, 1892
HpySE526I	ACGT	1 cut(s)	1833
Hsp92I	GRCGYC	1 cut(s)	170
HspAI	GCGC	1 cut(s)	1170
KspI	CCGCGG	1 cut(s)	1591
Kzo9I	GATC	4 cut(s)	484, 776, 1352, 1360
LmnI	GCTCC	4 cut(s)	1569, 1592, 1662, 1930
LweI	GCATC	7 cut(s)	55, 331, 343, 438, 525, 784, 1333
MabI	ACCWGGT	1 cut(s)	1669
MaeI	CTAG	3 cut(s)	1019, 1211, 1217
MaeII	ACGT	1 cut(s)	1833
MaeIII	GTNAC	4 cut(s)	271, 1448, 1748, 1886
MalI	GATC	4 cut(s)	486, 778, 1354, 1362
MbiI	CCGCTC	1 cut(s)	1846
MboI	GATC	4 cut(s)	484, 776, 1352, 1360
MfeI	CAATTG	1 cut(s)	1379
MflI	RGATCY	1 cut(s)	1352
MhlI	GDGCHC	8 cut(s)	530, 656, 689, 1010, 1183, 1519, 1667, 1906
MlyI	GAGTC	3 cut(s)	236, 833, 1499
MmeI	TCCRAC	1 cut(s)	1176
MroXI	GAANNNNTTC	1 cut(s)	95
MseI	TTAA	4 cut(s)	1617, 1629, 1776, 1827
MslI	CAYNNNNRTG	1 cut(s)	446
MspA1I	CMGCKG	6 cut(s)	293, 350, 747, 1550, 1567, 1590
MspI	CCGG	8 cut(s)	404, 876, 929, 1152, 1475, 1611, 1758, 1799
MunI	CAATTG	1 cut(s)	1379
MvaI	CCWGG	6 cut(s)	702, 829, 1543, 1671, 1770, 1823
MvnI	CGCG	2 cut(s)	1172, 1590
MwoI	GCNNNNNNNGC	8 cut(s)	995, 1141, 1178, 1252, 1523, 1556, 1714, 1852
NciI	CCSGG	4 cut(s)	404, 929, 1152, 1612
NcoI	CCATGG	1 cut(s)	441
NdeII	GATC	4 cut(s)	484, 776, 1352, 1360
NlaIV	GGNNCC	6 cut(s)	304, 1354, 1571, 1742, 1903, 1904
NmuCI	GTSAC	2 cut(s)	271, 1886
NspV	TTCGAA	1 cut(s)	159
PaeR7I	CTCGAG	1 cut(s)	655
PagI	TCATGA	1 cut(s)	670
PcsI	WCGNNNNNNNCGW	1 cut(s)	1905
PdmI	GAANNNNTTC	1 cut(s)	95
PfeI	GAWTC	1 cut(s)	135
PinAI	ACCGGT	1 cut(s)	875
PleI	GAGTC	3 cut(s)	235, 832, 1499
PpsI	GAGTC	3 cut(s)	235, 832, 1499
PpuMI	RGGWCCY	1 cut(s)	252
Psp124BI	GAGCTC	1 cut(s)	1667
Psp5II	RGGWCCY	1 cut(s)	252
Psp6I	CCWGG	6 cut(s)	700, 827, 1541, 1669, 1768, 1821
PspGI	CCWGG	6 cut(s)	700, 827, 1541, 1669, 1768, 1821
PspN4I	GGNNCC	6 cut(s)	304, 1354, 1571, 1742, 1903, 1904
PspOMI	GGGCCC	1 cut(s)	1902
PspPI	GGNCC	7 cut(s)	252, 384, 660, 1545, 1848, 1902, 1903
PspPPI	RGGWCCY	1 cut(s)	252
PspXI	VCTCGAGB	1 cut(s)	655
PstI	CTGCAG	2 cut(s)	425, 991
PstNI	CAGNNNCTG	1 cut(s)	255
PsuI	RGATCY	1 cut(s)	1352
PvuII	CAGCTG	1 cut(s)	747
RsaI	GTAC	3 cut(s)	613, 737, 1940
RsaNI	GTAC	3 cut(s)	612, 736, 1939
RseI	CAYNNNNRTG	1 cut(s)	446
Rsr2I	CGGWCCG	1 cut(s)	1848
RsrII	CGGWCCG	1 cut(s)	1848
SacI	GAGCTC	1 cut(s)	1667
SacII	CCGCGG	1 cut(s)	1591
SaqAI	TTAA	4 cut(s)	1617, 1629, 1776, 1827
Sau3AI	GATC	4 cut(s)	484, 776, 1352, 1360
Sau96I	GGNCC	7 cut(s)	252, 384, 660, 1545, 1848, 1902, 1903
SchI	GAGTC	3 cut(s)	236, 833, 1499
SduI	GDGCHC	8 cut(s)	530, 656, 689, 1010, 1183, 1519, 1667, 1906
SexAI	ACCWGGT	1 cut(s)	1669
SfaNI	GCATC	7 cut(s)	55, 331, 343, 438, 525, 784, 1333
SfcI	CTRYAG	3 cut(s)	421, 987, 1303
Sfr274I	CTCGAG	1 cut(s)	655
Sfr303I	CCGCGG	1 cut(s)	1591
SfuI	TTCGAA	1 cut(s)	159
SgrBI	CCGCGG	1 cut(s)	1591
SinI	GGWCC	3 cut(s)	252, 1545, 1848
SlaI	CTCGAG	1 cut(s)	655
SmiMI	CAYNNNNRTG	1 cut(s)	446
SmlI	CTYRAG	4 cut(s)	317, 427, 655, 1337
SmoI	CTYRAG	4 cut(s)	317, 427, 655, 1337
SspMI	CTAG	3 cut(s)	1019, 1211, 1217
SstI	GAGCTC	1 cut(s)	1667
StyI	CCWWGG	2 cut(s)	441, 965
TaaI	ACNGT	1 cut(s)	287
TaiI	ACGT	1 cut(s)	1836
TaqI	TCGA	9 cut(s)	39, 63, 159, 498, 524, 656, 850, 1359, 1445
TatI	WGTACW	1 cut(s)	1938
TauI	GCSGC	3 cut(s)	175, 293, 1082
TfiI	GAWTC	1 cut(s)	135
Tru1I	TTAA	4 cut(s)	1617, 1629, 1776, 1827
Tru9I	TTAA	4 cut(s)	1617, 1629, 1776, 1827
TscAI	CASTG	6 cut(s)	280, 290, 313, 988, 1077, 1519
TseFI	GTSAC	2 cut(s)	271, 1886
Tsp45I	GTSAC	2 cut(s)	271, 1886
TspGWI	ACGGA	2 cut(s)	390, 529
TspRI	CASTG	6 cut(s)	280, 290, 313, 988, 1077, 1519
VpaK11BI	GGWCC	3 cut(s)	252, 1545, 1848
XagI	CCTNNNNNAGG	1 cut(s)	1306
XapI	RAATTY	3 cut(s)	11, 1537, 1692
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1069
XhoI	CTCGAG	1 cut(s)	655
XmnI	GAANNNNTTC	1 cut(s)	95
XspI	CTAG	3 cut(s)	1019, 1211, 1217

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.