Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0008299

Physical Location & Seq

Genomic Coordinates Forward (+)

16531167 .. 16533119

Gene Structure 1953 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g17130.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1953 bp

ATGGAAAGCGAATTCCAGAAGCAGAAATCGGTTTTGGTCGAATTGTCCGCCTCGGACAATCTCGAAGCTTTCAGGACTGAAGTAGAAGAGAAGGGTTTCCATATTGATGAGGCCGGCTTTTGGTATGGAAGAAGAATCGGGTCAAAGAAGATGGGGTTCGAAGAGAGGACGCCGCTTATGATCGCTGCCATGTTCGGTAGCACTAGGGTTCTGAAGTATATAATTCAGTCTGGCATGGCTGATGTCAACAGGTGTTGCGGCTCAGATAGGGTCACTGCCCTTCACTGTGCCGCTGCTGGCGGTTCCACTGCTTCACTTGAGGTTGTCAAGCTCTTGCTTGATGCATCTGCTGATGCTGATTGCGTCAATGCTAACGGAAACAAGCCTGTTGACTTGATTGCCCCAGCTTTGAAGTCGCCCTGCAGCTCAAGAAGGAAGGCCATGGAGATGCTGTTGAGAGGCGATAAGTCAATTATGGAAAGCGATACTGAAGAGGGAGACCAACAGAAGGTTTCGAGCCCCCAGATGTCGAAAGAGGGAAGTGAGAAGAAAGAATATCCGATTGATATATCGTTGCCTGATATCAACAATGGGATATATGGTACAGATGAGTTCAGAATGTTCACTTTCAAGGTGAAGCCGTGCTCGAGGGCCTACTCTCATGACTGGACAGAGTGCCCTTTTGTTCACCCAGGCGAAAACGCCAGGAGGAGAGACCCAAAAAAGTACCCATACAGCTGTGTTCCCTGCCCTGAATTCCGCAAAGGATCGTGCCAGAAGCGAGATGTCTGTGAGTATGCTCATGGTGTCTTTGAGTCCTGGCTTCATCCTGCTCAGTATCGAACCCGCCTTTGCAAAGATGAAACCGGTTGCACGAGGAAAGTGTGCTTCTTTGCTCACCGACCCGAAGAACTACGCCCGGTGTATGCTTCTACGGGTTCAGCCATGCCTTCACCAAGGTCAATGTCAGTTAGTGCAGCAGATATGGCAGCCTTGAGCCCGTTAGCTCTGGGTTCATCAGCTATGTCTATGCCAGCTACATCAACACCGCCCATGTCTCCACTGGCGGCCGCTTCATCTCCTAAGAGCGGAGGTTTGTGGCAGAACAAAGTTAACCTCACCCCGCCTGCCTTGCAGCTTCCGGGTAGCAGGCTTAAGAGTGCGTGTAGTGCCCGAGATTTGGAGTTGGAGATGGAATTGCTAGGACTAGATAGTCATTCAAGCCAACAACAACAGCAACAGCAGCAACAGCACTTGTGGGATGAGATATCTCGTCTCTCCTCCTCGCCGTCCTACAGCAGGCATGGAGAATTGAAGCCAACTAACCTTGATGATGCTTTCGGATCCTTCGATCCTTCTTTGTCGTCTCAATTGCAGGGACTCTCTCTAAAGCCTTCAACCCCAAACCATCGCCAAAACATGAACCAGCTTCGTTCGAGCTACCCAACCAACTTGTCATCCTCTCCGGTGAGGAAGCCCTCATCATTTGGGCTCGACTCACCCAGTGCTCTTGCAGCAGCCGTTATGAATTCCAGGTCTGCTGCATTTGCACAGCAGCGGAGCCAGAGTTTCATTGACCGCGGAGCAATGAACCATCTTCCCGGGCTTAATGCCCCAGTTAATTCTTCCACCATGAGGCAGTCCTCAGATTGGGGCTCACCTGGTGGGAAATTGGATTGGGGAATGCAAGGAGACGAGCTGAACAAGCTGACGAAGTCTGCTTCTTTTGGGTTCCGAAGCAACAATGCCGGACCACCTGGCTTTAAGACTCCGGCGGTTGAGGAGCCGGATGTCTCTTGGGTCAATACCCTAGTTAGGGATGTTTCTTCCGAGAGGTCTGAGCTGTTTGGTGCAGACAAGAAGCAAAGGTATCATCACCTCAACAATGGGGGTCACGAAATGCTTCCGTCGTGGGCGGAGCTGATGTACATAGAACAGGAGCAGAGGGCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0006950 GO:0006952 GO:0008150 GO:0009266 GO:0009409 GO:0009605 GO:0009607 GO:0009620 GO:0009628 GO:0009889 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0042221 GO:0042493 GO:0043207 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0080090 GO:0098542 GO:0140110 GO:1901698 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank Ank_2 Ank_4 zf-CCCH

Protein Analysis

651

Amino Acids

71.47

Weight (kDa)

7.21

Isoelectric Point (pI)

60.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ank_2	PF12796	54 - 120	4.1e-10	Ankyrin repeats (3 copies)
Ank_4	PF13637	60 - 106	1.2e-06	Ankyrin repeats (many copies)
zf-CCCH_AtC3H23	PF25512	204 - 237	1.8e-20	AtC3H23-like, CCCH zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008299)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40140 AT2G40140 AT3G55980 AT3G55980
fragaria_vesca	FvH4_7g24560
malus_domestica	MD01G1154000.v1.1 MD07G1222900.v1.1
prunus_persica	Prupe.2G251000_v2.0.a1 Prupe.2G251000_v2.0.a1
pyrus_communis	pycom01g17130 pycom07g20150
rosa_chinensis	RchiOBHm_Chr1g0370401
rosa_laevigata	RLG00000027051
rosa_multiflora	Rmu_co8338923.1_g000001 Rmu_sc0005656.1_g000004
rosa_roxburghii	Rroxscaffold_4G00286610
rosa_rugosa	Rorug01G0356200
rosa_samantha	Rh1AG364600 Rh1BG327800 Rh1CG340800 Rh1DG358100
rosa_wichuraiana	Rw1G032080 Rw1G032130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1212
AccBSI	CCGCTC	1 cut(s)	1089
AccII	CGCG	1 cut(s)	1581
AclWI	GGATC	4 cut(s)	775, 1338, 1346, 1351
AcoI	YGGCCR	1 cut(s)	1068
AcsI	RAATTY	3 cut(s)	11, 755, 1528
AcuI	CTGAAG	3 cut(s)	99, 233, 510
AcyI	GRCGYC	1 cut(s)	170
AdeI	CACNNNGTG	2 cut(s)	1505, 1664
AfaI	GTAC	3 cut(s)	604, 728, 1928
AfiI	CCNNNNNNNGG	9 cut(s)	120, 508, 1088, 1180, 1299, 1635, 1650, 1815, 1816
AflII	CTTAAG	1 cut(s)	1154
AgeI	ACCGGT	1 cut(s)	866
AgsI	TTSAA	5 cut(s)	412, 631, 1221, 1315, 1398
AjnI	CCWGG	6 cut(s)	691, 704, 818, 1532, 1660, 1756
AjuI	GAANNNNNNNTTGG	2 cut(s)	17, 49
Alw21I	GWGCWC	2 cut(s)	647, 1510
Alw26I	GTCTC	7 cut(s)	492, 708, 1062, 1280, 1371, 1686, 1798
AlwI	GGATC	4 cut(s)	775, 1338, 1346, 1351
Ama87I	CYCGRG	3 cut(s)	646, 1173, 1601
AoxI	GGCC	4 cut(s)	111, 438, 651, 1068
ApoI	RAATTY	3 cut(s)	11, 755, 1528
AsiGI	ACCGGT	1 cut(s)	866
Asp700I	GAANNNNTTC	2 cut(s)	95, 1902
AspS9I	GGNCC	2 cut(s)	651, 1751
AsuC2I	CCSGG	4 cut(s)	920, 1143, 1602, 1603
AsuHPI	GGTGA	9 cut(s)	646, 680, 890, 945, 1111, 1480, 1491, 1650, 1868
AsuII	TTCGAA	1 cut(s)	159
AvaI	CYCGRG	3 cut(s)	646, 1173, 1601
AvaII	GGWCC	1 cut(s)	1751
BaeGI	GKGCMC	2 cut(s)	680, 1174
BamHI	GGATCC	1 cut(s)	1343
BanII	GRGCYC	4 cut(s)	521, 1001, 1494, 1658
BauI	CACGAG	1 cut(s)	874
Bbv12I	GWGCWC	2 cut(s)	647, 1510
BccI	CCATC	4 cut(s)	145, 1186, 1416, 1602
BceAI	ACGGC	3 cut(s)	625, 1273, 1505
BciT130I	CCWGG	6 cut(s)	693, 706, 820, 1534, 1662, 1758
BcnI	CCSGG	4 cut(s)	920, 1143, 1602, 1603
BcoDI	GTCTC	7 cut(s)	492, 708, 1062, 1280, 1371, 1686, 1798
BfaI	CTAG	4 cut(s)	204, 1202, 1208, 1811
BfmI	CTRYAG	2 cut(s)	421, 1294
BfrI	CTTAAG	1 cut(s)	1154
Bme18I	GGWCC	1 cut(s)	1751
BmeT110I	CYCGRG	3 cut(s)	646, 1173, 1601
BmgT120I	GGNCC	2 cut(s)	651, 1751
BmiI	GGNNCC	5 cut(s)	304, 1345, 1562, 1733, 1785
BmrI	ACTGGG	2 cut(s)	1497, 1610
BmsI	GCATC	5 cut(s)	331, 343, 353, 438, 1324
BmuI	ACTGGG	2 cut(s)	1497, 1610
Bpu14I	TTCGAA	1 cut(s)	159
BpuEI	CTTGAG	3 cut(s)	338, 412, 1015
BpuMI	CCSGG	4 cut(s)	920, 1143, 1602, 1603
BsaHI	GRCGYC	1 cut(s)	170
BsaI	GGTCTC	2 cut(s)	492, 708
BsaJI	CCNNGG	6 cut(s)	51, 441, 691, 956, 1579, 1601
BsaWI	WCCGGW	2 cut(s)	866, 1465
BsaXI	ACNNNNNCTCC	6 cut(s)	437, 467, 1552, 1582, 1910, 1940
Bsc4I	CCNNNNNNNGG	9 cut(s)	120, 508, 1088, 1180, 1299, 1635, 1650, 1815, 1816
Bse118I	RCCGGY	2 cut(s)	113, 866
Bse1I	ACTGG	4 cut(s)	671, 1068, 1503, 1616
Bse3DI	GCAATG	1 cut(s)	1593
BseBI	CCWGG	6 cut(s)	693, 706, 820, 1534, 1662, 1758
BseDI	CCNNGG	6 cut(s)	51, 441, 691, 956, 1579, 1601
BseGI	GGATG	5 cut(s)	826, 1267, 1457, 1795, 1825
BseLI	CCNNNNNNNGG	9 cut(s)	120, 508, 1088, 1180, 1299, 1635, 1650, 1815, 1816
BseMI	GCAATG	1 cut(s)	1593
BseMII	CTCAG	4 cut(s)	276, 848, 1659, 1830
BseNI	ACTGG	4 cut(s)	671, 1068, 1503, 1616
BseRI	GAGGAG	4 cut(s)	724, 1270, 1273, 1796
BseSI	GKGCMC	2 cut(s)	680, 1174
BseX3I	CGGCCG	1 cut(s)	1068
BseYI	CCCAGC	1 cut(s)	403
BsgI	GTGCAG	2 cut(s)	996, 1872
Bsh1236I	CGCG	1 cut(s)	1581
Bsh1285I	CGRYCG	1 cut(s)	1071
BshFI	GGCC	4 cut(s)	113, 440, 653, 1070
BshTI	ACCGGT	1 cut(s)	866
BsiEI	CGRYCG	1 cut(s)	1071
BsiHKAI	GWGCWC	2 cut(s)	647, 1510
BsiHKCI	CYCGRG	3 cut(s)	646, 1173, 1601
BsiSI	CCGG	9 cut(s)	114, 867, 920, 1142, 1466, 1602, 1749, 1772, 1787
BslFI	GGGAC	1 cut(s)	1392
BslI	CCNNNNNNNGG	9 cut(s)	120, 508, 1088, 1180, 1299, 1635, 1650, 1815, 1816
BsmAI	GTCTC	7 cut(s)	492, 708, 1062, 1280, 1371, 1686, 1798
BsmBI	CGTCTC	3 cut(s)	1280, 1371, 1686
BsmFI	GGGAC	1 cut(s)	1392
BsmI	GAATGC	1 cut(s)	1689
BsnI	GGCC	4 cut(s)	113, 440, 653, 1070
Bso31I	GGTCTC	2 cut(s)	492, 708
BsoBI	CYCGRG	3 cut(s)	646, 1173, 1601
Bsp119I	TTCGAA	1 cut(s)	159
Bsp1286I	GDGCHC	8 cut(s)	521, 647, 680, 1001, 1174, 1494, 1510, 1658
Bsp1407I	TGTACA	1 cut(s)	1926
Bsp143I	GATC	4 cut(s)	180, 767, 1343, 1351
Bsp19I	CCATGG	1 cut(s)	441
BspANI	GGCC	4 cut(s)	113, 440, 653, 1070
BspCNI	CTCAG	4 cut(s)	275, 847, 1658, 1831
BspFNI	CGCG	1 cut(s)	1581
BspHI	TCATGA	1 cut(s)	661
BspLI	GGNNCC	5 cut(s)	304, 1345, 1562, 1733, 1785
BspMAI	CTGCAG	1 cut(s)	425
BspPI	GGATC	4 cut(s)	775, 1338, 1346, 1351
BspT104I	TTCGAA	1 cut(s)	159
BspTI	CTTAAG	1 cut(s)	1154
BspTNI	GGTCTC	2 cut(s)	492, 708
BsrBI	CCGCTC	1 cut(s)	1089
BsrDI	GCAATG	1 cut(s)	1593
BsrFI	RCCGGY	2 cut(s)	113, 866
BsrGI	TGTACA	1 cut(s)	1926
BsrI	ACTGG	4 cut(s)	671, 1068, 1503, 1616
BssAI	RCCGGY	2 cut(s)	113, 866
BssECI	CCNNGG	6 cut(s)	51, 441, 691, 956, 1579, 1601
BssMI	GATC	4 cut(s)	180, 767, 1343, 1351
BssNI	GRCGYC	1 cut(s)	170
BssSI	CACGAG	1 cut(s)	874
BssT1I	CCWWGG	2 cut(s)	441, 956
Bst2BI	CACGAG	1 cut(s)	874
Bst2UI	CCWGG	6 cut(s)	693, 706, 820, 1534, 1662, 1758
Bst4CI	ACNGT	1 cut(s)	287
Bst6I	CTCTTC	3 cut(s)	81, 156, 486
BstACI	GRCGYC	1 cut(s)	170
BstAFI	CTTAAG	1 cut(s)	1154
BstAUI	TGTACA	1 cut(s)	1926
BstBI	TTCGAA	1 cut(s)	159
BstC8I	GCNNGC	6 cut(s)	115, 298, 1035, 1128, 1151, 1301
BstDEI	CTNAG	5 cut(s)	262, 834, 1083, 1645, 1839
BstDSI	CCRYGG	2 cut(s)	441, 1579
BstENI	CCTNNNNNAGG	1 cut(s)	1297
BstF5I	GGATG	5 cut(s)	826, 1267, 1457, 1795, 1825
BstFNI	CGCG	1 cut(s)	1581
BstKTI	GATC	4 cut(s)	183, 770, 1346, 1354
BstMAI	GTCTC	7 cut(s)	492, 708, 1062, 1280, 1371, 1686, 1798
BstMBI	GATC	4 cut(s)	180, 767, 1343, 1351
BstMCI	CGRYCG	1 cut(s)	1071
BstMWI	GCNNNNNNNGC	8 cut(s)	986, 1132, 1169, 1243, 1249, 1514, 1547, 1705
BstNI	CCWGG	6 cut(s)	693, 706, 820, 1534, 1662, 1758
BstSFI	CTRYAG	2 cut(s)	421, 1294
BstSLI	GKGCMC	2 cut(s)	680, 1174
BstUI	CGCG	1 cut(s)	1581
BstX2I	RGATCY	1 cut(s)	1343
BstYI	RGATCY	1 cut(s)	1343
BstZI	CGGCCG	1 cut(s)	1068
BsuRI	GGCC	4 cut(s)	113, 440, 653, 1070
BtgI	CCRYGG	2 cut(s)	441, 1579
BtgZI	GCGATG	1 cut(s)	1394
BtsCI	GGATG	5 cut(s)	826, 1267, 1457, 1795, 1825
BtsI	GCAGTG	2 cut(s)	273, 306
BtsIMutI	CAGTG	5 cut(s)	273, 283, 306, 1061, 1510
Cac8I	GCNNGC	6 cut(s)	115, 298, 1035, 1128, 1151, 1301
CciI	TCATGA	1 cut(s)	661
CciNI	GCGGCCGC	1 cut(s)	1068
Cfr10I	RCCGGY	2 cut(s)	113, 866
Cfr13I	GGNCC	2 cut(s)	651, 1751
Cfr42I	CCGCGG	1 cut(s)	1582
Cfr9I	CCCGGG	1 cut(s)	1601
CseI	GACGC	2 cut(s)	178, 352
CsiI	ACCWGGT	1 cut(s)	1660
Csp6I	GTAC	3 cut(s)	603, 727, 1927
CspAI	ACCGGT	1 cut(s)	866
CviQI	GTAC	3 cut(s)	603, 727, 1927
DdeI	CTNAG	5 cut(s)	262, 834, 1083, 1645, 1839
DpnI	GATC	4 cut(s)	182, 769, 1345, 1353
DpnII	GATC	4 cut(s)	180, 767, 1343, 1351
DraIII	CACNNNGTG	2 cut(s)	1505, 1664
DrdI	GACNNNNNNGTC	1 cut(s)	1212
DseDI	GACNNNNNNGTC	1 cut(s)	1212
EaeI	YGGCCR	1 cut(s)	1068
EagI	CGGCCG	1 cut(s)	1068
Eam1104I	CTCTTC	3 cut(s)	81, 156, 486
EarI	CTCTTC	3 cut(s)	81, 156, 486
EciI	GGCGGA	2 cut(s)	37, 1931
EclXI	CGGCCG	1 cut(s)	1068
Eco130I	CCWWGG	2 cut(s)	441, 956
Eco24I	GRGCYC	4 cut(s)	521, 1001, 1494, 1658
Eco31I	GGTCTC	2 cut(s)	492, 708
Eco32I	GATATC	2 cut(s)	583, 1269
Eco47I	GGWCC	1 cut(s)	1751
Eco52I	CGGCCG	1 cut(s)	1068
Eco57I	CTGAAG	3 cut(s)	99, 233, 510
Eco88I	CYCGRG	3 cut(s)	646, 1173, 1601
EcoNI	CCTNNNNNAGG	1 cut(s)	1297
EcoO109I	RGGNCCY	1 cut(s)	651
EcoRI	GAATTC	3 cut(s)	11, 755, 1528
EcoRII	CCWGG	6 cut(s)	691, 704, 818, 1532, 1660, 1756
EcoRV	GATATC	2 cut(s)	583, 1269
EcoT14I	CCWWGG	2 cut(s)	441, 956
EcoT22I	ATGCAT	1 cut(s)	346
EcoT38I	GRGCYC	4 cut(s)	521, 1001, 1494, 1658
ErhI	CCWWGG	2 cut(s)	441, 956
Esp3I	CGTCTC	3 cut(s)	1280, 1371, 1686
FaqI	GGGAC	1 cut(s)	1392
FauI	CCCGC	2 cut(s)	854, 1131
FokI	GGATG	5 cut(s)	813, 1274, 1444, 1802, 1832
FriOI	GRGCYC	4 cut(s)	521, 1001, 1494, 1658
FspBI	CTAG	4 cut(s)	204, 1202, 1208, 1811
GsaI	CCCAGC	1 cut(s)	407
HaeIII	GGCC	4 cut(s)	113, 440, 653, 1070
HapII	CCGG	9 cut(s)	114, 867, 920, 1142, 1466, 1602, 1749, 1772, 1787
HgaI	GACGC	2 cut(s)	178, 352
Hin1I	GRCGYC	1 cut(s)	170
HincII	GTYRAC	3 cut(s)	247, 391, 1114
HindII	GTYRAC	3 cut(s)	247, 391, 1114
HindIII	AAGCTT	1 cut(s)	66
HinfI	GANTC	5 cut(s)	135, 815, 1380, 1496, 1768
HpaI	GTTAAC	1 cut(s)	1114
HpaII	CCGG	9 cut(s)	114, 867, 920, 1142, 1466, 1602, 1749, 1772, 1787
HphI	GGTGA	9 cut(s)	646, 680, 890, 945, 1111, 1480, 1491, 1650, 1868
Hpy166II	GTNNAC	5 cut(s)	247, 391, 624, 688, 1114
Hpy188III	TCNNGA	6 cut(s)	16, 62, 73, 429, 662, 1895
Hpy8I	GTNNAC	5 cut(s)	247, 391, 624, 688, 1114
Hpy99I	CGWCG	1 cut(s)	1912
HpyAV	CCTTC	9 cut(s)	85, 290, 426, 430, 502, 960, 1357, 1365, 1404
HpyCH4III	ACNGT	1 cut(s)	287
HpyF10VI	GCNNNNNNNGC	8 cut(s)	986, 1132, 1169, 1243, 1249, 1514, 1547, 1705
HpyF3I	CTNAG	5 cut(s)	262, 834, 1083, 1645, 1839
Hsp92I	GRCGYC	1 cut(s)	170
KroI	GCCGGC	1 cut(s)	113
KroNI	GCCGGC	1 cut(s)	115
KspAI	GTTAAC	1 cut(s)	1114
KspI	CCGCGG	1 cut(s)	1582
Kzo9I	GATC	4 cut(s)	180, 767, 1343, 1351
LmnI	GCTCC	5 cut(s)	1560, 1583, 1783, 1918, 1939
LweI	GCATC	5 cut(s)	331, 343, 353, 438, 1324
MabI	ACCWGGT	1 cut(s)	1660
MaeI	CTAG	4 cut(s)	204, 1202, 1208, 1811
MaeIII	GTNAC	2 cut(s)	271, 1892
MalI	GATC	4 cut(s)	182, 769, 1345, 1353
MbiI	CCGCTC	1 cut(s)	1089
MboI	GATC	4 cut(s)	180, 767, 1343, 1351
MfeI	CAATTG	1 cut(s)	1370
MflI	RGATCY	1 cut(s)	1343
MhlI	GDGCHC	8 cut(s)	521, 647, 680, 1001, 1174, 1494, 1510, 1658
MlyI	GAGTC	4 cut(s)	824, 1374, 1490, 1762
MmeI	TCCRAC	1 cut(s)	1167
Mph1103I	ATGCAT	1 cut(s)	346
MroNI	GCCGGC	1 cut(s)	113
MroXI	GAANNNNTTC	2 cut(s)	95, 1902
MseI	TTAA	5 cut(s)	1113, 1155, 1608, 1620, 1764
MslI	CAYNNNNRTG	2 cut(s)	105, 446
MspA1I	CMGCKG	4 cut(s)	293, 738, 1558, 1581
MspCI	CTTAAG	1 cut(s)	1154
MspI	CCGG	9 cut(s)	114, 867, 920, 1142, 1466, 1602, 1749, 1772, 1787
MunI	CAATTG	1 cut(s)	1370
Mva1269I	GAATGC	1 cut(s)	1689
MvaI	CCWGG	6 cut(s)	693, 706, 820, 1534, 1662, 1758
MvnI	CGCG	1 cut(s)	1581
MwoI	GCNNNNNNNGC	8 cut(s)	986, 1132, 1169, 1243, 1249, 1514, 1547, 1705
NaeI	GCCGGC	1 cut(s)	115
NciI	CCSGG	4 cut(s)	920, 1143, 1602, 1603
NcoI	CCATGG	1 cut(s)	441
NdeII	GATC	4 cut(s)	180, 767, 1343, 1351
NgoMIV	GCCGGC	1 cut(s)	113
NlaIV	GGNNCC	5 cut(s)	304, 1345, 1562, 1733, 1785
NmuCI	GTSAC	2 cut(s)	271, 1892
NotI	GCGGCCGC	1 cut(s)	1068
NsiI	ATGCAT	1 cut(s)	346
NspV	TTCGAA	1 cut(s)	159
PaeR7I	CTCGAG	1 cut(s)	646
PagI	TCATGA	1 cut(s)	661
PcsI	WCGNNNNNNNCGW	1 cut(s)	1347
PctI	GAATGC	1 cut(s)	1689
PdiI	GCCGGC	1 cut(s)	115
PdmI	GAANNNNTTC	2 cut(s)	95, 1902
PfeI	GAWTC	1 cut(s)	135
PflFI	GACNNNGTC	1 cut(s)	1714
PinAI	ACCGGT	1 cut(s)	866
PleI	GAGTC	4 cut(s)	823, 1374, 1490, 1762
PpsI	GAGTC	4 cut(s)	823, 1374, 1490, 1762
Psp6I	CCWGG	6 cut(s)	691, 704, 818, 1532, 1660, 1756
PspFI	CCCAGC	1 cut(s)	403
PspGI	CCWGG	6 cut(s)	691, 704, 818, 1532, 1660, 1756
PspN4I	GGNNCC	5 cut(s)	304, 1345, 1562, 1733, 1785
PspPI	GGNCC	2 cut(s)	651, 1751
PspXI	VCTCGAGB	1 cut(s)	646
PstI	CTGCAG	1 cut(s)	425
PsuI	RGATCY	1 cut(s)	1343
PsyI	GACNNNGTC	1 cut(s)	1714
PvuII	CAGCTG	1 cut(s)	738
RsaI	GTAC	3 cut(s)	604, 728, 1928
RsaNI	GTAC	3 cut(s)	603, 727, 1927
RseI	CAYNNNNRTG	2 cut(s)	105, 446
SacII	CCGCGG	1 cut(s)	1582
SaqAI	TTAA	5 cut(s)	1113, 1155, 1608, 1620, 1764
Sau3AI	GATC	4 cut(s)	180, 767, 1343, 1351
Sau96I	GGNCC	2 cut(s)	651, 1751
SchI	GAGTC	4 cut(s)	824, 1374, 1490, 1762
SduI	GDGCHC	8 cut(s)	521, 647, 680, 1001, 1174, 1494, 1510, 1658
SexAI	ACCWGGT	1 cut(s)	1660
SfaNI	GCATC	5 cut(s)	331, 343, 353, 438, 1324
SfcI	CTRYAG	2 cut(s)	421, 1294
Sfr274I	CTCGAG	1 cut(s)	646
Sfr303I	CCGCGG	1 cut(s)	1582
SfuI	TTCGAA	1 cut(s)	159
SgrBI	CCGCGG	1 cut(s)	1582
SinI	GGWCC	1 cut(s)	1751
SlaI	CTCGAG	1 cut(s)	646
SmaI	CCCGGG	1 cut(s)	1603
SmiMI	CAYNNNNRTG	2 cut(s)	105, 446
SmlI	CTYRAG	5 cut(s)	317, 427, 646, 994, 1154
SmoI	CTYRAG	5 cut(s)	317, 427, 646, 994, 1154
SspMI	CTAG	4 cut(s)	204, 1202, 1208, 1811
StyI	CCWWGG	2 cut(s)	441, 956
TaaI	ACNGT	1 cut(s)	287
TatI	WGTACW	1 cut(s)	1926
TauI	GCSGC	5 cut(s)	175, 261, 293, 1070, 1073
TfiI	GAWTC	1 cut(s)	135
Tru1I	TTAA	5 cut(s)	1113, 1155, 1608, 1620, 1764
Tru9I	TTAA	5 cut(s)	1113, 1155, 1608, 1620, 1764
TscAI	CASTG	5 cut(s)	280, 290, 313, 1068, 1510
TseFI	GTSAC	2 cut(s)	271, 1892
Tsp45I	GTSAC	2 cut(s)	271, 1892
TspDTI	ATGAA	8 cut(s)	815, 876, 1005, 1065, 1436, 1541, 1561, 1604
TspGWI	ACGGA	2 cut(s)	390, 1896
TspMI	CCCGGG	1 cut(s)	1601
TspRI	CASTG	5 cut(s)	280, 290, 313, 1068, 1510
Tth111I	GACNNNGTC	1 cut(s)	1714
Vha464I	CTTAAG	1 cut(s)	1154
VpaK11BI	GGWCC	1 cut(s)	1751
XagI	CCTNNNNNAGG	1 cut(s)	1297
XapI	RAATTY	3 cut(s)	11, 755, 1528
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1060
XhoI	CTCGAG	1 cut(s)	646
XmaI	CCCGGG	1 cut(s)	1601
XmnI	GAANNNNTTC	2 cut(s)	95, 1902
XspI	CTAG	4 cut(s)	204, 1202, 1208, 1811
Zsp2I	ATGCAT	1 cut(s)	346

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.