Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0002604

Physical Location & Seq

Genomic Coordinates Reverse (-)

47228256 .. 47232049

Gene Structure 3794 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0356200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2025 bp

ATGGAATCCACACGAGTTTCACCAAGTGTTATAGCAAAGTTAATGGGTCTTGCTGAATCGCCACAGCAGCAGCCTGTCCAAAGAAGAAGAAGAGTACTATCTGAGAATTACTTTCACAGAGTTGCTTCTATTGGCGTCAGAGAGAAATGTCATTCATTGAGGTCGGTAGTAGGCCATCAAGATTGTAAGGATGTCTTTGAAGTTGTAAGTCCACTAAAAGGGGATAATGGCTTTAACCTGTCAGTTCATAAGGGAACAGAAAACTCGGGATTGTCAGAATTGAAGATGGAGACTAGGCAGGAGGAATTTCAAGTGTCATCAGAAAAGTATGAATGTCTACCAGGGGAAGTTGGTCTTGATGGCTTACATAAGTTTTTGAGGTCTCCATTGAAGTCAAATAGAAAAGGATGCTCCCCCAGTAGTGGAGTTGTTGCTTTGAAACCCAAGCATGGCTTGGCCGACAGTTCTGCAAGATCCTTCCCTCCAATGAGTTCCCTTGAAGCTTATCAGTTAGTTGATGAGAACTGCGCCGAGTTTCCTAGCCCTAGCAATGGGAAGATACACGGTAAAGGAATAGAACCAATTGGAAAGGTATCAAGGCCAAGGTCCAGAGGTGGCAACTCCATTGCAATGGCATCTGAACTCCTGAGGTCTCCTTCCTTGAATTTATCTGATCGGAGGAACCAATACCAGTCTTTTTCTTATTCAGATGAACCATACGTAGCCAGGGAAGCCAAAGAGCAACTCTCAGAACAATGGAAGAAGACTAAGAAGTTTGAAGGGTGTGGAAGGGCTGACAGAGGCATTACCCTTGGCGATTTACTTGCCATGCCTGTCCATGAAATAGGGCCAAGAAACTTGGATTACAAGCTTGGTATGCATTTTCGACCAAGAAAAAAGCCTGTTAAGCATGATCTGAAGGACCTGGACCTCAGTAAGTTTAGAAAACATCAAGATAAATATGAAGCTCTCTGTAATGAGTGGCCTTTCACGCCTAAAAGGTCTATCAATTGGGCGCAGAGCAGGTCATGTGAGTACAATTTCAACTATAAGGATCGTTCAAGACCTATAAATTTGAGAACCAACAATAAGAAATTTCAATCTTTTCCTAGCCTGGAATCAGAAGGTAGTTTTACAGTAGAAAATACTTGCATGGTCCATAATGATCTGAAGAATGGAACTGAGGAGAAAGACAGTAATACTACAGATACTTCAGTCCAAAAGGAAACATCCATGGAAGTTGATGAAGAAAGCAATTTTTCTTTGCACTGCTTCACCACGTCAGATTGTATGGCAAGCTTGGAGGAAGTTTACCAGCCTAGTCCAGTTTCAGTTCTGGAACCACTATTTAGAGGAGATAATTCACCTTCGCCGGAACGCTTGGGAAGTGTCAATGTTGACACCAGTGAATACTCCGATACATGCTCCGAAGGTTCTGGAATGATTGTGTCAAGTGATGATGATACTAGTGAAAGATCTGTGAAAGACTATAAGGAAAGCAGTTTAGTGGGGTTGTTCAAAGTTGAAGAAAGTAGAGATTTTTCCTACCTCATTGATGTGTTATTGGAGGCAGGCTTTTATAGTCGGGGAGTAGAAGTGGACTGTGATACCTGGTGCTTTCAAGAATGCCCGATGAGCCATTATGTCTTTGAGAGCCTGGAGAAGAAATTTGGTGATCAGGTGTCTTGGAATAGGTCAGACCGGAGGCTTTTGTTTGATCGTATAAATGATGGGCTAATAGAGATTCTCCAGCCATCTATGGGTGAACCCATATGGACCAAGCCTGTATCTAGAAGGATTAGAACGCAGTCTGGTCAGGAGATGATAGAGGAAGATCTGTGGATGTTGCTTGTTAATCAAGAGAAGGAAGGAATGGAAGCAAGAAAGAACTTGGTAGAGAAGCTGCTGAGAAGTGGAATTGGGAATTTAGATTTAGGAGATGAAATTGATTTTATTGGTAGAGAAGTAGAGAGATTGTTGATTGATGAGCTTGTAGAAGAGTTAGTTAGCAACTTAGCACAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000162 GO:0003674 GO:0003824 GO:0004640 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006568 GO:0006576 GO:0006586 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009072 GO:0009073 GO:0009308 GO:0009309 GO:0009314 GO:0009411 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009987 GO:0016053 GO:0016853 GO:0016860 GO:0016861 GO:0018130 GO:0019438 GO:0019752 GO:0032501 GO:0032502 GO:0034641 GO:0040007 GO:0042401 GO:0042430 GO:0042435 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044106 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046219 GO:0046394 GO:0046483 GO:0048856 GO:0050896 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00400 ko01100 ko01110 ko01130 ko01230 map00400 map01100 map01110 map01130 map01230

Pfam Domains

Protein Families

PRAI

Protein Analysis

674

Amino Acids

76.38

Weight (kDa)

5.51

Isoelectric Point (pI)

61.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF4378	PF14309	513 - 667	7.9e-27	Domain of unknown function (DUF4378)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002604)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07780 AT1G07780 AT1G07780 AT1G07780 AT1G07780 AT1G07780 AT1G07780 AT1G07780 AT1G07780 AT1G07780 AT1G07780 AT1G07780 AT1G07780 AT1G29410 AT1G29410 AT1G29410 AT1G29410 AT1G29410 AT1G29410 AT1G29410 AT5G05590 AT5G05590 AT5G05590 AT5G05590
fragaria_vesca	FvH4_4g21980 FvH4_7g24571
malus_domestica	MD07G1223000.v1.1
prunus_persica	Prupe.2G251100_v2.0.a1
pyrus_communis	pycom07g20160
rosa_chinensis	RchiOBHm_Chr1g0370411
rosa_laevigata	RLG00000027050
rosa_multiflora	Rmu_sc0005656.1_g000005
rosa_roxburghii	Rroxscaffold_4G00286600
rosa_rugosa	Rorug01G0356200
rosa_samantha	Rh1AG364700 Rh1BG327900 Rh1CG340900 Rh1DG358200
rosa_wichuraiana	Rw1G032090 Rw1G032140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1014
AccI	GTMKAC	1 cut(s)	337
AclWI	GGATC	2 cut(s)	468, 1062
AcoI	YGGCCR	1 cut(s)	456
AcsI	RAATTY	6 cut(s)	305, 664, 1072, 1094, 1667, 1924
AcuI	CTGAAG	3 cut(s)	938, 1190, 1197
AcyI	GRCGYC	1 cut(s)	135
AdeI	CACNNNGTG	1 cut(s)	26
AfaI	GTAC	2 cut(s)	96, 1037
AfiI	CCNNNNNNNGG	5 cut(s)	218, 422, 449, 551, 1760
AhlI	ACTAGT	1 cut(s)	1466
AjiI	CACGTC	1 cut(s)	1281
AjnI	CCWGG	6 cut(s)	340, 725, 924, 1113, 1610, 1656
AluBI	AGCT	6 cut(s)	503, 871, 968, 1299, 1903, 1990
AluI	AGCT	6 cut(s)	503, 871, 968, 1299, 1903, 1990
Alw26I	GTCTC	3 cut(s)	284, 387, 657
AlwI	GGATC	2 cut(s)	468, 1062
Ama87I	CYCGRG	1 cut(s)	265
AoxI	GGCC	5 cut(s)	172, 456, 599, 848, 983
ApeKI	GCWGC	3 cut(s)	67, 70, 1903
ApoI	RAATTY	6 cut(s)	305, 664, 1072, 1094, 1667, 1924
AspLEI	GCGC	2 cut(s)	530, 1018
AspS9I	GGNCC	6 cut(s)	606, 848, 922, 928, 1156, 1776
AsuHPI	GGTGA	5 cut(s)	12, 1267, 1356, 1685, 1775
AvaI	CYCGRG	1 cut(s)	265
AvaII	GGWCC	5 cut(s)	606, 922, 928, 1156, 1776
AxyI	CCTNAGG	1 cut(s)	647
BaeI	ACNNNNGTAYC	2 cut(s)	1200, 1233
BauI	CACGAG	1 cut(s)	12
BbsI	GAAGAC	1 cut(s)	770
BbvI	GCAGC	3 cut(s)	79, 82, 1890
BccI	CCATC	5 cut(s)	183, 280, 353, 1724, 1762
BcgI	CGANNNNNNTGC	4 cut(s)	449, 483, 806, 840
BciT130I	CCWGG	6 cut(s)	342, 727, 926, 1115, 1612, 1658
BclI	TGATCA	1 cut(s)	1675
BcoDI	GTCTC	3 cut(s)	284, 387, 657
BcuI	ACTAGT	1 cut(s)	1466
BfaI	CTAG	7 cut(s)	294, 540, 546, 1110, 1320, 1467, 1791
BfmI	CTRYAG	1 cut(s)	1203
BfuAI	ACCTGC	1 cut(s)	1014
BglII	AGATCT	2 cut(s)	1475, 1834
BisI	GCNGC	3 cut(s)	68, 71, 1904
BlsI	GCNGC	3 cut(s)	69, 72, 1905
BmcAI	AGTACT	1 cut(s)	96
Bme1390I	CCNGG	6 cut(s)	342, 727, 926, 1115, 1612, 1658
Bme18I	GGWCC	5 cut(s)	606, 922, 928, 1156, 1776
BmeT110I	CYCGRG	1 cut(s)	265
BmgBI	CACGTC	1 cut(s)	1281
BmgT120I	GGNCC	6 cut(s)	606, 848, 922, 928, 1156, 1776
BmiI	GGNNCC	2 cut(s)	683, 1341
BmrFI	CCNGG	6 cut(s)	342, 727, 926, 1115, 1612, 1658
BmrI	ACTGGG	1 cut(s)	411
BmsI	GCATC	2 cut(s)	398, 644
BmuI	ACTGGG	1 cut(s)	411
BpiI	GAAGAC	1 cut(s)	770
BplI	GAGNNNNNCTC	2 cut(s)	731, 763
BpmI	CTGGAG	2 cut(s)	1679, 1733
BsaAI	YACGTR	1 cut(s)	721
BsaHI	GRCGYC	1 cut(s)	135
BsaI	GGTCTC	2 cut(s)	387, 657
BsaJI	CCNNGG	5 cut(s)	341, 602, 726, 811, 1233
BsaWI	WCCGGW	1 cut(s)	1701
BsaXI	ACNNNNNCTCC	2 cut(s)	1581, 1611
Bsc4I	CCNNNNNNNGG	5 cut(s)	218, 422, 449, 551, 1760
Bse1I	ACTGG	4 cut(s)	417, 691, 1325, 1404
Bse21I	CCTNAGG	1 cut(s)	647
Bse3DI	GCAATG	3 cut(s)	556, 624, 636
BseBI	CCWGG	6 cut(s)	342, 727, 926, 1115, 1612, 1658
BseDI	CCNNGG	5 cut(s)	341, 602, 726, 811, 1233
BseGI	GGATG	4 cut(s)	196, 413, 1229, 1848
BseLI	CCNNNNNNNGG	5 cut(s)	218, 422, 449, 551, 1760
BseMI	GCAATG	3 cut(s)	556, 624, 636
BseMII	CTCAG	6 cut(s)	93, 638, 762, 946, 1173, 1898
BseNI	ACTGG	4 cut(s)	417, 691, 1325, 1404
BseRI	GAGGAG	2 cut(s)	1199, 1368
BseXI	GCAGC	3 cut(s)	79, 82, 1890
BshFI	GGCC	5 cut(s)	174, 458, 601, 850, 985
BsiHKCI	CYCGRG	1 cut(s)	265
BsiSI	CCGG	2 cut(s)	1373, 1702
BslI	CCNNNNNNNGG	5 cut(s)	218, 422, 449, 551, 1760
BsmAI	GTCTC	3 cut(s)	284, 387, 657
BsmI	GAATGC	1 cut(s)	1631
BsnI	GGCC	5 cut(s)	174, 458, 601, 850, 985
Bso31I	GGTCTC	2 cut(s)	387, 657
BsoBI	CYCGRG	1 cut(s)	265
Bsp143I	GATC	9 cut(s)	473, 673, 913, 1054, 1165, 1475, 1675, 1717, 1834
Bsp19I	CCATGG	1 cut(s)	1233
BspANI	GGCC	5 cut(s)	174, 458, 601, 850, 985
BspCNI	CTCAG	6 cut(s)	94, 639, 761, 945, 1174, 1899
BspLI	GGNNCC	2 cut(s)	683, 1341
BspMI	ACCTGC	1 cut(s)	1014
BspPI	GGATC	2 cut(s)	468, 1062
BspTNI	GGTCTC	2 cut(s)	387, 657
BsrDI	GCAATG	3 cut(s)	556, 624, 636
BsrI	ACTGG	4 cut(s)	417, 691, 1325, 1404
BssECI	CCNNGG	5 cut(s)	341, 602, 726, 811, 1233
BssMI	GATC	9 cut(s)	473, 673, 913, 1054, 1165, 1475, 1675, 1717, 1834
BssNI	GRCGYC	1 cut(s)	135
BssSI	CACGAG	1 cut(s)	12
BssT1I	CCWWGG	3 cut(s)	602, 811, 1233
Bst2BI	CACGAG	1 cut(s)	12
Bst2UI	CCWGG	6 cut(s)	342, 727, 926, 1115, 1612, 1658
Bst4CI	ACNGT	6 cut(s)	464, 566, 1138, 1196, 1604, 2022
Bst6I	CTCTTC	2 cut(s)	85, 1992
BstACI	GRCGYC	1 cut(s)	135
BstBAI	YACGTR	1 cut(s)	721
BstC8I	GCNNGC	2 cut(s)	1297, 1573
BstDEI	CTNAG	8 cut(s)	102, 647, 748, 768, 932, 1182, 1907, 2014
BstDSI	CCRYGG	1 cut(s)	1233
BstF5I	GGATG	4 cut(s)	196, 413, 1229, 1848
BstHHI	GCGC	2 cut(s)	530, 1018
BstKTI	GATC	9 cut(s)	476, 676, 916, 1057, 1168, 1478, 1678, 1720, 1837
BstMAI	GTCTC	3 cut(s)	284, 387, 657
BstMBI	GATC	9 cut(s)	473, 673, 913, 1054, 1165, 1475, 1675, 1717, 1834
BstMWI	GCNNNNNNNGC	6 cut(s)	67, 731, 877, 907, 991, 1635
BstNI	CCWGG	6 cut(s)	342, 727, 926, 1115, 1612, 1658
BstNSI	RCATGY	1 cut(s)	1425
BstSCI	CCNGG	6 cut(s)	340, 725, 924, 1113, 1610, 1656
BstSFI	CTRYAG	1 cut(s)	1203
BstSNI	TACGTA	1 cut(s)	721
BstV1I	GCAGC	3 cut(s)	79, 82, 1890
BstV2I	GAAGAC	1 cut(s)	770
BstX2I	RGATCY	3 cut(s)	473, 1475, 1834
BstXI	CCANNNNNNTGG	1 cut(s)	631
BstYI	RGATCY	3 cut(s)	473, 1475, 1834
Bsu36I	CCTNAGG	1 cut(s)	647
BsuRI	GGCC	5 cut(s)	174, 458, 601, 850, 985
BtgI	CCRYGG	1 cut(s)	1233
BtrI	CACGTC	1 cut(s)	1281
BtsCI	GGATG	4 cut(s)	196, 413, 1229, 1848
BtsI	GCAGTG	1 cut(s)	1267
BtsIMutI	CAGTG	2 cut(s)	1267, 1411
BveI	ACCTGC	1 cut(s)	1014
Cac8I	GCNNGC	2 cut(s)	1297, 1573
CfoI	GCGC	2 cut(s)	530, 1018
Cfr13I	GGNCC	6 cut(s)	606, 848, 922, 928, 1156, 1776
CseI	GACGC	1 cut(s)	124
CsiI	ACCWGGT	1 cut(s)	1610
Csp6I	GTAC	2 cut(s)	95, 1036
CviAII	CATG	8 cut(s)	449, 829, 839, 911, 1029, 1153, 1234, 1422
CviQI	GTAC	2 cut(s)	95, 1036
DdeI	CTNAG	8 cut(s)	102, 647, 748, 768, 932, 1182, 1907, 2014
DpnI	GATC	9 cut(s)	475, 675, 915, 1056, 1167, 1477, 1677, 1719, 1836
DpnII	GATC	9 cut(s)	473, 673, 913, 1054, 1165, 1475, 1675, 1717, 1834
DraIII	CACNNNGTG	1 cut(s)	26
EaeI	YGGCCR	1 cut(s)	456
Eam1104I	CTCTTC	2 cut(s)	85, 1992
EarI	CTCTTC	2 cut(s)	85, 1992
Eco105I	TACGTA	1 cut(s)	721
Eco130I	CCWWGG	3 cut(s)	602, 811, 1233
Eco31I	GGTCTC	2 cut(s)	387, 657
Eco47I	GGWCC	5 cut(s)	606, 922, 928, 1156, 1776
Eco57I	CTGAAG	3 cut(s)	938, 1190, 1197
Eco81I	CCTNAGG	1 cut(s)	647
Eco88I	CYCGRG	1 cut(s)	265
EcoO109I	RGGNCCY	1 cut(s)	922
EcoRII	CCWGG	6 cut(s)	340, 725, 924, 1113, 1610, 1656
EcoT14I	CCWWGG	3 cut(s)	602, 811, 1233
EcoT22I	ATGCAT	1 cut(s)	882
ErhI	CCWWGG	3 cut(s)	602, 811, 1233
FaeI	CATG	8 cut(s)	452, 832, 842, 914, 1032, 1156, 1237, 1425
FalI	AAGNNNNNCTT	6 cut(s)	179, 211, 339, 371, 437, 469
FatI	CATG	8 cut(s)	448, 828, 838, 910, 1028, 1152, 1233, 1421
FauNDI	CATATG	1 cut(s)	1772
FbaI	TGATCA	1 cut(s)	1675
FblI	GTMKAC	1 cut(s)	337
Fnu4HI	GCNGC	3 cut(s)	68, 71, 1904
FokI	GGATG	4 cut(s)	203, 420, 1216, 1855
Fsp4HI	GCNGC	3 cut(s)	68, 71, 1904
FspBI	CTAG	7 cut(s)	294, 540, 546, 1110, 1320, 1467, 1791
GlaI	GCGC	2 cut(s)	529, 1017
GluI	GCNGC	3 cut(s)	68, 71, 1904
GsuI	CTGGAG	2 cut(s)	1679, 1733
HaeIII	GGCC	5 cut(s)	174, 458, 601, 850, 985
HapII	CCGG	2 cut(s)	1373, 1702
HgaI	GACGC	1 cut(s)	124
HhaI	GCGC	2 cut(s)	530, 1018
Hin1I	GRCGYC	1 cut(s)	135
Hin1II	CATG	8 cut(s)	452, 832, 842, 914, 1032, 1156, 1237, 1425
Hin6I	GCGC	2 cut(s)	528, 1016
HinP1I	GCGC	2 cut(s)	528, 1016
HincII	GTYRAC	1 cut(s)	1399
HindII	GTYRAC	1 cut(s)	1399
HindIII	AAGCTT	3 cut(s)	501, 869, 1297
HinfI	GANTC	4 cut(s)	5, 56, 1118, 1744
HpaII	CCGG	2 cut(s)	1373, 1702
HphI	GGTGA	5 cut(s)	12, 1267, 1356, 1685, 1775
Hpy166II	GTNNAC	6 cut(s)	212, 338, 1312, 1399, 1600, 1766
Hpy8I	GTNNAC	6 cut(s)	212, 338, 1312, 1399, 1600, 1766
HpyCH4III	ACNGT	6 cut(s)	464, 566, 1138, 1196, 1604, 2022
HpyCH4IV	ACGT	2 cut(s)	720, 1280
HpyCH4V	TGCA	5 cut(s)	470, 629, 880, 1152, 1267
HpyF10VI	GCNNNNNNNGC	6 cut(s)	67, 731, 877, 907, 991, 1635
HpyF3I	CTNAG	8 cut(s)	102, 647, 748, 768, 932, 1182, 1907, 2014
HpySE526I	ACGT	2 cut(s)	720, 1280
Hsp92I	GRCGYC	1 cut(s)	135
Hsp92II	CATG	8 cut(s)	452, 832, 842, 914, 1032, 1156, 1237, 1425
HspAI	GCGC	2 cut(s)	528, 1016
Ksp22I	TGATCA	1 cut(s)	1675
Kzo9I	GATC	9 cut(s)	473, 673, 913, 1054, 1165, 1475, 1675, 1717, 1834
LmnI	GCTCC	2 cut(s)	416, 1430
Lsp1109I	GCAGC	3 cut(s)	79, 82, 1890
LweI	GCATC	2 cut(s)	398, 644
MabI	ACCWGGT	1 cut(s)	1610
MaeI	CTAG	7 cut(s)	294, 540, 546, 1110, 1320, 1467, 1791
MaeII	ACGT	2 cut(s)	720, 1280
MalI	GATC	9 cut(s)	475, 675, 915, 1056, 1167, 1477, 1677, 1719, 1836
MboI	GATC	9 cut(s)	473, 673, 913, 1054, 1165, 1475, 1675, 1717, 1834
MfeI	CAATTG	2 cut(s)	582, 1009
MflI	RGATCY	3 cut(s)	473, 1475, 1834
Mph1103I	ATGCAT	1 cut(s)	882
MseI	TTAA	4 cut(s)	41, 234, 906, 1854
MslI	CAYNNNNRTG	2 cut(s)	629, 1556
MspI	CCGG	2 cut(s)	1373, 1702
MspR9I	CCNGG	6 cut(s)	342, 727, 926, 1115, 1612, 1658
MunI	CAATTG	2 cut(s)	582, 1009
Mva1269I	GAATGC	1 cut(s)	1631
MvaI	CCWGG	6 cut(s)	342, 727, 926, 1115, 1612, 1658
MwoI	GCNNNNNNNGC	6 cut(s)	67, 731, 877, 907, 991, 1635
NcoI	CCATGG	1 cut(s)	1233
NdeI	CATATG	1 cut(s)	1772
NdeII	GATC	9 cut(s)	473, 673, 913, 1054, 1165, 1475, 1675, 1717, 1834
NlaIII	CATG	8 cut(s)	452, 832, 842, 914, 1032, 1156, 1237, 1425
NlaIV	GGNNCC	2 cut(s)	683, 1341
NmeAIII	GCCGAG	1 cut(s)	556
NsiI	ATGCAT	1 cut(s)	882
NspI	RCATGY	1 cut(s)	1425
PctI	GAATGC	1 cut(s)	1631
PfeI	GAWTC	4 cut(s)	5, 56, 1118, 1744
PkrI	GCNGC	3 cut(s)	69, 72, 1905
Ppu21I	YACGTR	1 cut(s)	721
PpuMI	RGGWCCY	1 cut(s)	922
Psp5II	RGGWCCY	1 cut(s)	922
Psp6I	CCWGG	6 cut(s)	340, 725, 924, 1113, 1610, 1656
PspGI	CCWGG	6 cut(s)	340, 725, 924, 1113, 1610, 1656
PspN4I	GGNNCC	2 cut(s)	683, 1341
PspPI	GGNCC	6 cut(s)	606, 848, 922, 928, 1156, 1776
PspPPI	RGGWCCY	1 cut(s)	922
PsuI	RGATCY	3 cut(s)	473, 1475, 1834
RsaI	GTAC	2 cut(s)	96, 1037
RsaNI	GTAC	2 cut(s)	95, 1036
RseI	CAYNNNNRTG	2 cut(s)	629, 1556
SaqAI	TTAA	4 cut(s)	41, 234, 906, 1854
SatI	GCNGC	3 cut(s)	68, 71, 1904
Sau3AI	GATC	9 cut(s)	473, 673, 913, 1054, 1165, 1475, 1675, 1717, 1834
Sau96I	GGNCC	6 cut(s)	606, 848, 922, 928, 1156, 1776
ScaI	AGTACT	1 cut(s)	96
ScrFI	CCNGG	6 cut(s)	342, 727, 926, 1115, 1612, 1658
SexAI	ACCWGGT	1 cut(s)	1610
SfaNI	GCATC	2 cut(s)	398, 644
SfcI	CTRYAG	1 cut(s)	1203
SinI	GGWCC	5 cut(s)	606, 922, 928, 1156, 1776
SmiMI	CAYNNNNRTG	2 cut(s)	629, 1556
SnaBI	TACGTA	1 cut(s)	721
SpeI	ACTAGT	1 cut(s)	1466
SspMI	CTAG	7 cut(s)	294, 540, 546, 1110, 1320, 1467, 1791
StyD4I	CCNGG	6 cut(s)	340, 725, 924, 1113, 1610, 1656
StyI	CCWWGG	3 cut(s)	602, 811, 1233
TaaI	ACNGT	6 cut(s)	464, 566, 1138, 1196, 1604, 2022
TaiI	ACGT	2 cut(s)	723, 1283
TaqI	TCGA	1 cut(s)	886
TatI	WGTACW	2 cut(s)	94, 1035
TfiI	GAWTC	4 cut(s)	5, 56, 1118, 1744
Tru1I	TTAA	4 cut(s)	41, 234, 906, 1854
Tru9I	TTAA	4 cut(s)	41, 234, 906, 1854
TscAI	CASTG	2 cut(s)	1274, 1411
TseI	GCWGC	3 cut(s)	67, 70, 1903
TspDTI	ATGAA	8 cut(s)	144, 236, 345, 726, 855, 978, 1260, 1956
TspRI	CASTG	2 cut(s)	1274, 1411
VpaK11BI	GGWCC	5 cut(s)	606, 922, 928, 1156, 1776
XapI	RAATTY	6 cut(s)	305, 664, 1072, 1094, 1667, 1924
XbaI	TCTAGA	1 cut(s)	1790
XceI	RCATGY	1 cut(s)	1425
XcmI	CCANNNNNNNNNTGG	1 cut(s)	451
XmiI	GTMKAC	1 cut(s)	337
XspI	CTAG	7 cut(s)	294, 540, 546, 1110, 1320, 1467, 1791
ZrmI	AGTACT	1 cut(s)	96
Zsp2I	ATGCAT	1 cut(s)	882

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.