Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002604

Physical Location & Seq

Genomic Coordinates Reverse (-)

2409865 .. 2412777

Gene Structure 2913 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G07780.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 828 bp

ATGTCAACAGGAATATCCACTGATCTCCATGTCCATTTTGGAGCTCTAAATTTCTCAAAAACCTACAAATCTGGTTTAAGCAATCGAACGGTGTCTTTTTCGAGAGTCGGGTATGCTCAGAACAGGAAATTGAGCTGCAGTGTTTCCAACACAGAGAATGTAGCTCCTAAGGATGATGAAAGAGGAAAGGATAGACCTTTGGTTAAGATGTGTGGCATCACATCAGCCAGAGATGCAGCTATGGCAGTTGAGGCTGGTGCCGATTTTATTGGGATGATTATTTGGCCACATTCAAAACGATCTATTTCTCTTTCTGTCGCAAAGGATATCTCCAAAGTGGCCAGGGAAGGTGGGGCCAAACCTGTTGGTGTTTTTGTTGAAGATGATGAGAACACGATACTGAGAGCAGCTGATTCCTCTGACCTTGAGCTTGTGCAGCTTCATGGTAATGGTTCGCGTGCTGCTTTCTCGAGGTTAGTACGCAAGAGGAGAGTCATATATGTCCTTAATGCAAATCAGGATGGAAAGCTCTTGAATGAAGTTCCTGAAGAGGATTGTCATCTTGCTGATTGGATTCTTGTGGATAGTGCAACGGGTGGGAGTGGACACGGATTTAACTGGGCTCAATTCAAGTTGCCTTCCGTCAGAAGCAGAAATGGGTGGCTCTTAGCTGGGGGAATCAATCCAACAAATGTTTCAGAAGCTCTTTCTATCCTTCAACCTGATGGAATTGATGTTAGTAGCGGTATTTGCGGTACAGACGGTATCCAGAAGGATAAGTCTAAGATAAGCTCCTTTATAACTGCAGTTCGCTCTGTACACTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000162 GO:0003674 GO:0003824 GO:0004640 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006568 GO:0006576 GO:0006586 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009072 GO:0009073 GO:0009308 GO:0009309 GO:0009314 GO:0009411 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009987 GO:0016053 GO:0016853 GO:0016860 GO:0016861 GO:0018130 GO:0019438 GO:0019752 GO:0032501 GO:0032502 GO:0034641 GO:0040007 GO:0042401 GO:0042430 GO:0042435 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044106 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046219 GO:0046394 GO:0046483 GO:0048856 GO:0050896 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00400 ko01100 ko01110 ko01130 ko01230 map00400 map01100 map01110 map01130 map01230

Pfam Domains

Protein Families

PRAI

Protein Analysis

275

Amino Acids

29.63

Weight (kDa)

8.63

Isoelectric Point (pI)

34.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PRAI	PF00697	68 - 201	1.1e-16	N-(5'phosphoribosyl)anthranilate (PRA) isomerase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002604)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07780 AT1G07780 AT1G07780 AT1G07780 AT1G07780 AT1G07780 AT1G07780 AT1G07780 AT1G07780 AT1G07780 AT1G07780 AT1G07780 AT1G07780 AT1G29410 AT1G29410 AT1G29410 AT1G29410 AT1G29410 AT1G29410 AT1G29410 AT5G05590 AT5G05590 AT5G05590 AT5G05590
fragaria_vesca	FvH4_4g21980 FvH4_7g24571
malus_domestica	MD07G1223000.v1.1
prunus_persica	Prupe.2G251100_v2.0.a1
pyrus_communis	pycom07g20160
rosa_chinensis	RchiOBHm_Chr1g0370411
rosa_laevigata	RLG00000027050
rosa_multiflora	Rmu_sc0005656.1_g000005
rosa_roxburghii	Rroxscaffold_4G00286600
rosa_rugosa	Rorug01G0356200
rosa_samantha	Rh1AG364700 Rh1BG327900 Rh1CG340900 Rh1DG358200
rosa_wichuraiana	Rw1G032090 Rw1G032140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	800
AccB1I	GGYRCC	1 cut(s)	257
AccII	CGCG	1 cut(s)	457
AciI	CCGC	2 cut(s)	744, 753
AcoI	YGGCCR	2 cut(s)	284, 339
AcsI	RAATTY	1 cut(s)	49
AcuI	CTGAAG	1 cut(s)	567
AfaI	GTAC	3 cut(s)	480, 757, 819
AgsI	TTSAA	5 cut(s)	294, 380, 535, 631, 719
AjnI	CCWGG	1 cut(s)	341
AjuI	GAANNNNNNNTTGG	2 cut(s)	679, 711
Alw21I	GWGCWC	1 cut(s)	46
Ama87I	CYCGRG	1 cut(s)	469
AoxI	GGCC	3 cut(s)	284, 339, 354
ApeKI	GCWGC	5 cut(s)	135, 236, 407, 436, 461
ApoI	RAATTY	1 cut(s)	49
AspS9I	GGNCC	1 cut(s)	354
AvaI	CYCGRG	1 cut(s)	469
AxyI	CCTNAGG	1 cut(s)	168
BalI	TGGCCA	2 cut(s)	286, 341
BanI	GGYRCC	1 cut(s)	257
BanII	GRGCYC	2 cut(s)	46, 625
Bbv12I	GWGCWC	1 cut(s)	46
BbvI	GCAGC	5 cut(s)	122, 248, 419, 448, 448
BccI	CCATC	2 cut(s)	515, 719
BciT130I	CCWGG	1 cut(s)	343
BciVI	GTATCC	1 cut(s)	776
BfmI	CTRYAG	2 cut(s)	136, 804
BfuI	GTATCC	1 cut(s)	776
BisI	GCNGC	5 cut(s)	136, 237, 408, 437, 462
BlsI	GCNGC	5 cut(s)	137, 238, 409, 438, 463
Bme1390I	CCNGG	1 cut(s)	343
BmeT110I	CYCGRG	1 cut(s)	469
BmgT120I	GGNCC	1 cut(s)	354
BmiI	GGNNCC	2 cut(s)	259, 355
BmrFI	CCNGG	1 cut(s)	343
BmrI	ACTGGG	1 cut(s)	628
BmsI	GCATC	2 cut(s)	223, 225
BmuI	ACTGGG	1 cut(s)	628
BpuEI	CTTGAG	1 cut(s)	446
BsaBI	GATNNNNATC	1 cut(s)	558
BsaJI	CCNNGG	1 cut(s)	342
Bse1I	ACTGG	1 cut(s)	623
Bse21I	CCTNAGG	1 cut(s)	168
Bse8I	GATNNNNATC	1 cut(s)	558
BseBI	CCWGG	1 cut(s)	343
BseDI	CCNNGG	1 cut(s)	342
BseGI	GGATG	3 cut(s)	178, 279, 526
BseJI	GATNNNNATC	1 cut(s)	558
BseMII	CTCAG	2 cut(s)	131, 392
BseNI	ACTGG	1 cut(s)	623
BseRI	GAGGAG	1 cut(s)	502
BseXI	GCAGC	5 cut(s)	122, 248, 419, 448, 448
BseYI	CCCAGC	1 cut(s)	671
BsgI	GTGCAG	1 cut(s)	455
Bsh1236I	CGCG	1 cut(s)	457
BshFI	GGCC	3 cut(s)	286, 341, 356
BshNI	GGYRCC	1 cut(s)	257
BsiHKAI	GWGCWC	1 cut(s)	46
BsiHKCI	CYCGRG	1 cut(s)	469
BsnI	GGCC	3 cut(s)	286, 341, 356
BsoBI	CYCGRG	1 cut(s)	469
Bsp1286I	GDGCHC	2 cut(s)	46, 625
Bsp1407I	TGTACA	1 cut(s)	817
Bsp143I	GATC	2 cut(s)	22, 299
BspACI	CCGC	2 cut(s)	744, 753
BspANI	GGCC	3 cut(s)	286, 341, 356
BspCNI	CTCAG	2 cut(s)	130, 393
BspFNI	CGCG	1 cut(s)	457
BspLI	GGNNCC	2 cut(s)	259, 355
BspMAI	CTGCAG	2 cut(s)	140, 808
BspT107I	GGYRCC	1 cut(s)	257
BsrGI	TGTACA	1 cut(s)	817
BsrI	ACTGG	1 cut(s)	623
BssECI	CCNNGG	1 cut(s)	342
BssMI	GATC	2 cut(s)	22, 299
Bst2UI	CCWGG	1 cut(s)	343
Bst4CI	ACNGT	2 cut(s)	91, 764
Bst6I	CTCTTC	1 cut(s)	543
BstAUI	TGTACA	1 cut(s)	817
BstC8I	GCNNGC	1 cut(s)	459
BstDEI	CTNAG	5 cut(s)	117, 168, 401, 667, 783
BstF5I	GGATG	3 cut(s)	178, 279, 526
BstFNI	CGCG	1 cut(s)	457
BstKTI	GATC	2 cut(s)	25, 302
BstMBI	GATC	2 cut(s)	22, 299
BstMWI	GCNNNNNNNGC	5 cut(s)	233, 242, 251, 436, 750
BstNI	CCWGG	1 cut(s)	343
BstSCI	CCNGG	1 cut(s)	341
BstSFI	CTRYAG	2 cut(s)	136, 804
BstUI	CGCG	1 cut(s)	457
BstV1I	GCAGC	5 cut(s)	122, 248, 419, 448, 448
Bsu36I	CCTNAGG	1 cut(s)	168
BsuI	GTATCC	1 cut(s)	776
BsuRI	GGCC	3 cut(s)	286, 341, 356
BtsCI	GGATG	3 cut(s)	178, 279, 526
BtsI	GCAGTG	1 cut(s)	145
BtsIMutI	CAGTG	2 cut(s)	18, 145
Cac8I	GCNNGC	1 cut(s)	459
Cfr13I	GGNCC	1 cut(s)	354
Csp6I	GTAC	3 cut(s)	479, 756, 818
CviAII	CATG	2 cut(s)	29, 443
CviQI	GTAC	3 cut(s)	479, 756, 818
DdeI	CTNAG	5 cut(s)	117, 168, 401, 667, 783
DpnI	GATC	2 cut(s)	24, 301
DpnII	GATC	2 cut(s)	22, 299
EaeI	YGGCCR	2 cut(s)	284, 339
Eam1104I	CTCTTC	1 cut(s)	543
EarI	CTCTTC	1 cut(s)	543
Ecl136II	GAGCTC	1 cut(s)	44
Eco24I	GRGCYC	2 cut(s)	46, 625
Eco32I	GATATC	1 cut(s)	328
Eco53kI	GAGCTC	1 cut(s)	44
Eco57I	CTGAAG	1 cut(s)	567
Eco81I	CCTNAGG	1 cut(s)	168
Eco88I	CYCGRG	1 cut(s)	469
EcoICRI	GAGCTC	1 cut(s)	44
EcoRII	CCWGG	1 cut(s)	341
EcoRV	GATATC	1 cut(s)	328
EcoT38I	GRGCYC	2 cut(s)	46, 625
FaeI	CATG	2 cut(s)	32, 446
FaiI	YATR	8 cut(s)	30, 114, 242, 444, 497, 499, 501, 800
FatI	CATG	2 cut(s)	28, 442
Fnu4HI	GCNGC	5 cut(s)	136, 237, 408, 437, 462
FokI	GGATG	3 cut(s)	185, 286, 533
FriOI	GRGCYC	2 cut(s)	46, 625
Fsp4HI	GCNGC	5 cut(s)	136, 237, 408, 437, 462
GluI	GCNGC	5 cut(s)	136, 237, 408, 437, 462
GsaI	CCCAGC	1 cut(s)	675
HaeIII	GGCC	3 cut(s)	286, 341, 356
Hin1II	CATG	2 cut(s)	32, 446
HincII	GTYRAC	1 cut(s)	6
HindII	GTYRAC	1 cut(s)	6
HinfI	GANTC	5 cut(s)	105, 413, 492, 574, 678
Hpy166II	GTNNAC	3 cut(s)	6, 605, 820
Hpy188I	TCNGA	4 cut(s)	120, 421, 647, 700
Hpy188III	TCNNGA	6 cut(s)	102, 469, 518, 532, 545, 769
Hpy8I	GTNNAC	3 cut(s)	6, 605, 820
HpyAV	CCTTC	4 cut(s)	341, 648, 725, 766
HpyCH4III	ACNGT	2 cut(s)	91, 764
HpyCH4V	TGCA	6 cut(s)	138, 236, 436, 512, 590, 806
HpyF10VI	GCNNNNNNNGC	5 cut(s)	233, 242, 251, 436, 750
HpyF3I	CTNAG	5 cut(s)	117, 168, 401, 667, 783
Hsp92II	CATG	2 cut(s)	32, 446
Kzo9I	GATC	2 cut(s)	22, 299
LmnI	GCTCC	3 cut(s)	41, 169, 797
Lsp1109I	GCAGC	5 cut(s)	122, 248, 419, 448, 448
LweI	GCATC	2 cut(s)	223, 225
MalI	GATC	2 cut(s)	24, 301
MboI	GATC	2 cut(s)	22, 299
MboII	GAAGA	2 cut(s)	392, 560
MhlI	GDGCHC	2 cut(s)	46, 625
MlsI	TGGCCA	2 cut(s)	286, 341
MluCI	AATT	4 cut(s)	49, 128, 626, 729
MluNI	TGGCCA	2 cut(s)	286, 341
MlyI	GAGTC	2 cut(s)	114, 501
MmeI	TCCRAC	2 cut(s)	171, 710
MnlI	CCTC	6 cut(s)	176, 244, 427, 465, 480, 544
Mox20I	TGGCCA	2 cut(s)	286, 341
MscI	TGGCCA	2 cut(s)	286, 341
MseI	TTAA	4 cut(s)	77, 204, 507, 615
MslI	CAYNNNNRTG	1 cut(s)	447
Msp20I	TGGCCA	2 cut(s)	286, 341
MspA1I	CMGCKG	1 cut(s)	410
MspR9I	CCNGG	1 cut(s)	343
MvaI	CCWGG	1 cut(s)	343
MvnI	CGCG	1 cut(s)	457
MwoI	GCNNNNNNNGC	5 cut(s)	233, 242, 251, 436, 750
NdeII	GATC	2 cut(s)	22, 299
NlaIII	CATG	2 cut(s)	32, 446
NlaIV	GGNNCC	2 cut(s)	259, 355
PaeR7I	CTCGAG	1 cut(s)	469
PfeI	GAWTC	3 cut(s)	413, 574, 678
PkrI	GCNGC	5 cut(s)	137, 238, 409, 438, 463
PleI	GAGTC	2 cut(s)	113, 500
PpsI	GAGTC	2 cut(s)	113, 500
PsiI	TTATAA	1 cut(s)	800
Psp124BI	GAGCTC	1 cut(s)	46
Psp6I	CCWGG	1 cut(s)	341
PspFI	CCCAGC	1 cut(s)	671
PspGI	CCWGG	1 cut(s)	341
PspN4I	GGNNCC	2 cut(s)	259, 355
PspPI	GGNCC	1 cut(s)	354
PstI	CTGCAG	2 cut(s)	140, 808
PvuII	CAGCTG	1 cut(s)	410
RsaI	GTAC	3 cut(s)	480, 757, 819
RsaNI	GTAC	3 cut(s)	479, 756, 818
RseI	CAYNNNNRTG	1 cut(s)	447
SacI	GAGCTC	1 cut(s)	46
SaqAI	TTAA	4 cut(s)	77, 204, 507, 615
SatI	GCNGC	5 cut(s)	136, 237, 408, 437, 462
Sau3AI	GATC	2 cut(s)	22, 299
Sau96I	GGNCC	1 cut(s)	354
SchI	GAGTC	2 cut(s)	114, 501
ScrFI	CCNGG	1 cut(s)	343
SduI	GDGCHC	2 cut(s)	46, 625
SfaNI	GCATC	2 cut(s)	223, 225
SfcI	CTRYAG	2 cut(s)	136, 804
Sfr274I	CTCGAG	1 cut(s)	469
SlaI	CTCGAG	1 cut(s)	469
SmiMI	CAYNNNNRTG	1 cut(s)	447
SmlI	CTYRAG	2 cut(s)	425, 469
SmoI	CTYRAG	2 cut(s)	425, 469
Sse9I	AATT	4 cut(s)	49, 128, 626, 729
SsiI	CCGC	2 cut(s)	744, 753
SstI	GAGCTC	1 cut(s)	46
StyD4I	CCNGG	1 cut(s)	341
TaaI	ACNGT	2 cut(s)	91, 764
TaqI	TCGA	3 cut(s)	85, 101, 470
TasI	AATT	4 cut(s)	49, 128, 626, 729
TatI	WGTACW	1 cut(s)	817
TfiI	GAWTC	3 cut(s)	413, 574, 678
Tru1I	TTAA	4 cut(s)	77, 204, 507, 615
Tru9I	TTAA	4 cut(s)	77, 204, 507, 615
TscAI	CASTG	2 cut(s)	25, 145
TseI	GCWGC	5 cut(s)	135, 236, 407, 436, 461
TspDTI	ATGAA	3 cut(s)	192, 431, 552
TspGWI	ACGGA	2 cut(s)	624, 631
TspRI	CASTG	2 cut(s)	25, 145
XapI	RAATTY	1 cut(s)	49
XcmI	CCANNNNNNNNNTGG	1 cut(s)	35
XhoI	CTCGAG	1 cut(s)	469

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.