Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0008299

Physical Location & Seq

Genomic Coordinates Reverse (-)

7943140 .. 7945113

Gene Structure 1974 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000027051

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1974 bp

ATGGAAAATGAATTTCAGAATCAGAACGGTGGCAGCCTGTGTAAGTCATCGGTTTTGGTTGAGTTGTCTGCCTCGGACAATCTCGATGCTTTCAGGAGTGAAGTAGAAGAGAAAGGTTTCCATGTTGATGAGGCCAGCTTTTGGTATGGAAGAAGAATTGGGTCAAAGAAGATGGGGTTCGAAGAGAGGACACCGCTTATGATCGCTGCCATGTTTGGTAGCACCAAGGTTTTGAAGTATATAATTGACTCTGGCAAGGTTGATGTCAATAGGTCTTGTGGTTCTGATAGGGTCACTGCCCTTCACTGTGCCACTGCTGGCGGTTCCTCTTCTTCGCTTGAGGTTGTCAAGCTCTTGCTTGATGCATCTGCTGATGCTAATTGTGTCACTGCTAATGGAAACAAGCCTGTTGATTTGATTGCCCCGGCGTTGAAGTCACCTTGCAACTCAAGAAGAAAGGCCATGGAGATGTTGTTGAAGGGCGATATGTCACTTTTGGGAAGTGATATTGATGATCAAGAGGTTCCAAGCCTTCAGTTGTTGAAAGAGGGAAGCGAGAAGAAAGAATATCCGATTGATATTGCATTGCCAGATATCAACAATGGGATTTATGGTTCAGATGAGTTCAGAATGTACACTTTCAAGGTGAAGCCGTGCTCCAGGGCCTACTCTCATGACTGGACCGAGTGCCCTTTTGTTCACCCCGGTGAGAATGCAAGGAGAAGAGACCCAAGGAAGTATCCATACAGCTGTGTCCCCTGCCCTGAGTTCCGCAAAGGCTCATGCCAGAAGGGAGATGTCTGTGAATATGCTCATGGTGTTTTTGAGTCCTGGCTTCATCCTGCTCAATACCGCACTCGCCTTTGCAAGGACGAAACTGGATGCACAAGGAAGGTGTGCTTCTTTGCTCACAAACCTGAAGAGTTGCGCCCAGTGTATGCTTCCACGGGTTCAGCCATGCCTTCACCCAGGTCTATGTCAGCCAGTGCTGGAGATATGACAACCATGAGCCCATTAGCTCTTGGTTCACCATCTCTGTCTATGCCTACTGCATCAACACCACCCATGTCTCCAATTGTAGCCTCTTCTCCTAAGAATGGAGGTCTGTGGCAGAACAAGGTTAACCTCACCCCACCTGCCTTGCAGCTTCCAGGTAGCAGGCTAAAGAGTGCTTCAAGCGCTCGTGATTTGGACTTGGAGATGGAATTTCTAGGGCGTGATAATCACCACGCTAACCAACAGCAACAGCAACAGCATATGTGGGATGAGATGTCTCGTCTCTCCTCTCCATCTTGCTATAATAACAGCAGGATTGGAGAACTGAAGCCAACTAACCTTGACGACCTTTTTGGATCATTGGATCCTTCTTTATTGTCCCAATTGCAGGCACTCTCAACACAAACCCAGTTACAATCTTCACCTGGGCTTCAGAGTCGCCAAAACATGAACCAACTCCGTTCAAGTTACCCATCCAACTTGTCATCCTCTCCTGCGAGGAAGCCCTCGTCATACGGGCTTGACTCACCTGCAGCATTGGCAGCAGCAGTTATGAATTCAAGGTCTGCTGCCTTTGCAAAGCGGAGCCATAGTTTCATTGACCGTGGAGCAGTAACCCATCATCCAGGGTTTACATCGGCTGCTAACTCAAACACCATGATGTCATCTTCGGATTGGAGCTCACCTAGTGGGAAATTGGATTGGGGAATTCAAGGAGATGATCTGAACAAGCTGAGGAAGTCTGCTTCTTTTGGGTTCAGAAGCAACAATGCTGGAACACCAAACAACATGATGCCATCAGCTCTTGACGAGCCAGATGTGTCTTGGGTCAATTCTCTGGTGAAAGATGTTTCTTCCGAGAGGTCCGAGATGTTTGGTGCAGAGAGGCAGAACTATCGTCCGTTGAACAAGGGGGTTCATGAAATGCTTCCGTCATGGGCGGAGCAGATGTATATAGAACAGGAGCAGAGGGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0006950 GO:0006952 GO:0008150 GO:0009266 GO:0009409 GO:0009605 GO:0009607 GO:0009620 GO:0009628 GO:0009889 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0042221 GO:0042493 GO:0043207 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0080090 GO:0098542 GO:0140110 GO:1901698 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank Ank_2 Ank_4 zf-CCCH

Protein Analysis

658

Amino Acids

72.13

Weight (kDa)

6.72

Isoelectric Point (pI)

58.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ank_2	PF12796	61 - 127	3.3e-10	Ankyrin repeats (3 copies)
Ank_4	PF13637	67 - 113	2.7e-06	Ankyrin repeats (many copies)
zf-CCCH_AtC3H23	PF25512	208 - 241	8.8e-21	AtC3H23-like, CCCH zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0008299)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40140 AT2G40140 AT3G55980 AT3G55980
fragaria_vesca	FvH4_7g24560
malus_domestica	MD01G1154000.v1.1 MD07G1222900.v1.1
prunus_persica	Prupe.2G251000_v2.0.a1 Prupe.2G251000_v2.0.a1
pyrus_communis	pycom01g17130 pycom07g20150
rosa_chinensis	RchiOBHm_Chr1g0370401
rosa_laevigata	RLG00000027051
rosa_multiflora	Rmu_co8338923.1_g000001 Rmu_sc0005656.1_g000004
rosa_roxburghii	Rroxscaffold_4G00286610
rosa_rugosa	Rorug01G0356200
rosa_samantha	Rh1AG364600 Rh1BG327800 Rh1CG340800 Rh1DG358100
rosa_wichuraiana	Rw1G032080 Rw1G032130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1144, 1534
Acc36I	ACCTGC	2 cut(s)	1144, 1534
AccB7I	CCANNNNNTGG	1 cut(s)	141
AciI	CCGC	6 cut(s)	194, 321, 772, 853, 1579, 1937
AclWI	GGATC	3 cut(s)	1355, 1360, 1368
AcsI	RAATTY	4 cut(s)	11, 1205, 1552, 1704
AcuI	CTGAAG	4 cut(s)	518, 939, 1343, 1412
AdeI	CACNNNGTG	1 cut(s)	1685
AfaI	GTAC	1 cut(s)	635
AfeI	AGCGCT	1 cut(s)	1180
AfiI	CCNNNNNNNGG	4 cut(s)	141, 868, 1097, 1384
AjnI	CCWGG	6 cut(s)	659, 830, 968, 1150, 1420, 1621
AleI	CACNNNNGTG	1 cut(s)	705
AloI	GAACNNNNNNTCC	2 cut(s)	598, 630
AluBI	AGCT	8 cut(s)	138, 352, 750, 1019, 1147, 1677, 1729, 1799
AluI	AGCT	8 cut(s)	138, 352, 750, 1019, 1147, 1677, 1729, 1799
Alw21I	GWGCWC	2 cut(s)	659, 1679
Alw26I	GTCTC	4 cut(s)	720, 1074, 1278, 1283
AlwI	GGATC	3 cut(s)	1355, 1360, 1368
Aor51HI	AGCGCT	1 cut(s)	1180
AoxI	GGCC	3 cut(s)	132, 459, 663
ApeKI	GCWGC	8 cut(s)	33, 206, 1144, 1529, 1538, 1541, 1565, 1637
ApoI	RAATTY	4 cut(s)	11, 1205, 1552, 1704
ArsI	GACNNNNNNTTYG	2 cut(s)	1331, 1363
Asp700I	GAANNNNTTC	2 cut(s)	116, 1923
AspLEI	GCGC	2 cut(s)	930, 1181
AspS9I	GGNCC	3 cut(s)	663, 681, 1860
AsuC2I	CCSGG	2 cut(s)	425, 705
AsuII	TTCGAA	1 cut(s)	180
AvaII	GGWCC	2 cut(s)	681, 1860
BaeGI	GKGCMC	1 cut(s)	692
BamHI	GGATCC	1 cut(s)	1360
BanII	GRGCYC	2 cut(s)	1013, 1679
BarI	GAAGNNNNNNTAC	2 cut(s)	728, 760
BauI	CACGAG	1 cut(s)	1182
Bbv12I	GWGCWC	2 cut(s)	659, 1679
BbvCI	CCTCAGC	1 cut(s)	1730
BbvI	GCAGC	8 cut(s)	45, 193, 1156, 1541, 1550, 1552, 1553, 1624
BccI	CCATC	7 cut(s)	166, 1039, 1195, 1297, 1477, 1623, 1801
BceAI	ACGGC	1 cut(s)	637
BcgI	CGANNNNNNTGC	2 cut(s)	1874, 1908
BciT130I	CCWGG	6 cut(s)	661, 832, 970, 1152, 1422, 1623
BciVI	GTATCC	1 cut(s)	750
BclI	TGATCA	1 cut(s)	514
BcnI	CCSGG	2 cut(s)	425, 705
BcoDI	GTCTC	4 cut(s)	720, 1074, 1278, 1283
BfaI	CTAG	2 cut(s)	1211, 1683
BfmI	CTRYAG	1 cut(s)	1527
BfoI	RGCGCY	1 cut(s)	1182
BfuAI	ACCTGC	2 cut(s)	1144, 1534
BfuI	GTATCC	1 cut(s)	750
BisI	GCNGC	8 cut(s)	34, 207, 1145, 1530, 1539, 1542, 1566, 1638
BlsI	GCNGC	8 cut(s)	35, 208, 1146, 1531, 1540, 1543, 1567, 1639
Bme1390I	CCNGG	8 cut(s)	425, 661, 705, 832, 970, 1152, 1422, 1623
Bme18I	GGWCC	2 cut(s)	681, 1860
BmgT120I	GGNCC	3 cut(s)	663, 681, 1860
BmiI	GGNNCC	4 cut(s)	325, 525, 1362, 1583
BmrFI	CCNGG	8 cut(s)	425, 661, 705, 832, 970, 1152, 1422, 1623
BmrI	ACTGGG	2 cut(s)	926, 1399
BmsI	GCATC	7 cut(s)	76, 352, 364, 374, 872, 1061, 1779
BmuI	ACTGGG	2 cut(s)	926, 1399
BpmI	CTGGAG	2 cut(s)	643, 1011
Bpu10I	CCTNAGC	1 cut(s)	1730
Bpu14I	TTCGAA	1 cut(s)	180
BpuEI	CTTGAG	2 cut(s)	359, 433
BpuMI	CCSGG	2 cut(s)	425, 705
BsaI	GGTCTC	1 cut(s)	720
BsaXI	ACNNNNNCTCC	6 cut(s)	458, 488, 1573, 1603, 1931, 1961
Bsc4I	CCNNNNNNNGG	4 cut(s)	141, 868, 1097, 1384
Bse1I	ACTGG	5 cut(s)	683, 883, 932, 984, 1405
Bse3DI	GCAATG	1 cut(s)	584
BseBI	CCWGG	6 cut(s)	661, 832, 970, 1152, 1422, 1623
BseGI	GGATG	6 cut(s)	838, 887, 1270, 1469, 1481, 1618
BseLI	CCNNNNNNNGG	4 cut(s)	141, 868, 1097, 1384
BseMI	GCAATG	1 cut(s)	584
BseMII	CTCAG	2 cut(s)	756, 1721
BseNI	ACTGG	5 cut(s)	683, 883, 932, 984, 1405
BseRI	GAGGAG	1 cut(s)	1273
BseSI	GKGCMC	1 cut(s)	692
BseXI	GCAGC	8 cut(s)	45, 193, 1156, 1541, 1550, 1552, 1553, 1624
BsgI	GTGCAG	1 cut(s)	1896
BshFI	GGCC	3 cut(s)	134, 461, 665
BsiHKAI	GWGCWC	2 cut(s)	659, 1679
BsiSI	CCGG	2 cut(s)	425, 705
BslFI	GGGAC	2 cut(s)	740, 1360
BslI	CCNNNNNNNGG	4 cut(s)	141, 868, 1097, 1384
BsmAI	GTCTC	4 cut(s)	720, 1074, 1278, 1283
BsmBI	CGTCTC	1 cut(s)	1283
BsmFI	GGGAC	2 cut(s)	740, 1360
BsmI	GAATGC	1 cut(s)	718
BsnI	GGCC	3 cut(s)	134, 461, 665
Bso31I	GGTCTC	1 cut(s)	720
Bsp119I	TTCGAA	1 cut(s)	180
Bsp1286I	GDGCHC	4 cut(s)	659, 692, 1013, 1679
Bsp1407I	TGTACA	1 cut(s)	633
Bsp143I	GATC	5 cut(s)	201, 514, 1352, 1360, 1717
Bsp19I	CCATGG	1 cut(s)	462
BspACI	CCGC	6 cut(s)	194, 321, 772, 853, 1579, 1937
BspANI	GGCC	3 cut(s)	134, 461, 665
BspCNI	CTCAG	2 cut(s)	757, 1722
BspHI	TCATGA	2 cut(s)	673, 1915
BspLI	GGNNCC	4 cut(s)	325, 525, 1362, 1583
BspMAI	CTGCAG	1 cut(s)	1531
BspMI	ACCTGC	2 cut(s)	1144, 1534
BspPI	GGATC	3 cut(s)	1355, 1360, 1368
BspT104I	TTCGAA	1 cut(s)	180
BspTNI	GGTCTC	1 cut(s)	720
BsrDI	GCAATG	1 cut(s)	584
BsrGI	TGTACA	1 cut(s)	633
BsrI	ACTGG	5 cut(s)	683, 883, 932, 984, 1405
BssMI	GATC	5 cut(s)	201, 514, 1352, 1360, 1717
BssSI	CACGAG	1 cut(s)	1182
BssT1I	CCWWGG	3 cut(s)	225, 462, 731
Bst2BI	CACGAG	1 cut(s)	1182
Bst2UI	CCWGG	6 cut(s)	661, 832, 970, 1152, 1422, 1623
Bst4CI	ACNGT	3 cut(s)	29, 308, 1601
Bst6I	CTCTTC	6 cut(s)	102, 177, 334, 718, 915, 1090
BstAUI	TGTACA	1 cut(s)	633
BstBI	TTCGAA	1 cut(s)	180
BstC8I	GCNNGC	4 cut(s)	136, 319, 1160, 1386
BstDEI	CTNAG	3 cut(s)	765, 1092, 1730
BstDSI	CCRYGG	3 cut(s)	462, 945, 1600
BstENI	CCTNNNNNAGG	1 cut(s)	866
BstF5I	GGATG	6 cut(s)	838, 887, 1270, 1469, 1481, 1618
BstH2I	RGCGCY	1 cut(s)	1182
BstHHI	GCGC	2 cut(s)	930, 1181
BstKTI	GATC	5 cut(s)	204, 517, 1355, 1363, 1720
BstMAI	GTCTC	4 cut(s)	720, 1074, 1278, 1283
BstMBI	GATC	5 cut(s)	201, 514, 1352, 1360, 1717
BstMWI	GCNNNNNNNGC	4 cut(s)	1178, 1535, 1538, 1571
BstNI	CCWGG	6 cut(s)	661, 832, 970, 1152, 1422, 1623
BstSCI	CCNGG	8 cut(s)	423, 659, 703, 830, 968, 1150, 1420, 1621
BstSFI	CTRYAG	1 cut(s)	1527
BstSLI	GKGCMC	1 cut(s)	692
BstV1I	GCAGC	8 cut(s)	45, 193, 1156, 1541, 1550, 1552, 1553, 1624
BstX2I	RGATCY	1 cut(s)	1360
BstYI	RGATCY	1 cut(s)	1360
BsuI	GTATCC	1 cut(s)	750
BsuRI	GGCC	3 cut(s)	134, 461, 665
BtgI	CCRYGG	3 cut(s)	462, 945, 1600
BtsCI	GGATG	6 cut(s)	838, 887, 1270, 1469, 1481, 1618
BtsI	GCAGTG	3 cut(s)	294, 312, 387
BtsIMutI	CAGTG	6 cut(s)	294, 304, 312, 387, 939, 991
BveI	ACCTGC	2 cut(s)	1144, 1534
Cac8I	GCNNGC	4 cut(s)	136, 319, 1160, 1386
CciI	TCATGA	2 cut(s)	673, 1915
CfoI	GCGC	2 cut(s)	930, 1181
Cfr13I	GGNCC	3 cut(s)	663, 681, 1860
Csp6I	GTAC	1 cut(s)	634
CspCI	CAANNNNNGTGG	2 cut(s)	1122, 1157
CviQI	GTAC	1 cut(s)	634
DdeI	CTNAG	3 cut(s)	765, 1092, 1730
DpnI	GATC	5 cut(s)	203, 516, 1354, 1362, 1719
DpnII	GATC	5 cut(s)	201, 514, 1352, 1360, 1717
DraIII	CACNNNGTG	1 cut(s)	1685
Eam1104I	CTCTTC	6 cut(s)	102, 177, 334, 718, 915, 1090
EarI	CTCTTC	6 cut(s)	102, 177, 334, 718, 915, 1090
EciI	GGCGGA	1 cut(s)	1952
Ecl136II	GAGCTC	1 cut(s)	1677
Eco130I	CCWWGG	3 cut(s)	225, 462, 731
Eco24I	GRGCYC	2 cut(s)	1013, 1679
Eco31I	GGTCTC	1 cut(s)	720
Eco32I	GATATC	1 cut(s)	595
Eco47I	GGWCC	2 cut(s)	681, 1860
Eco47III	AGCGCT	1 cut(s)	1180
Eco53kI	GAGCTC	1 cut(s)	1677
Eco57I	CTGAAG	4 cut(s)	518, 939, 1343, 1412
EcoICRI	GAGCTC	1 cut(s)	1677
EcoNI	CCTNNNNNAGG	1 cut(s)	866
EcoO109I	RGGNCCY	1 cut(s)	663
EcoRI	GAATTC	2 cut(s)	1552, 1704
EcoRII	CCWGG	6 cut(s)	659, 830, 968, 1150, 1420, 1621
EcoRV	GATATC	1 cut(s)	595
EcoT14I	CCWWGG	3 cut(s)	225, 462, 731
EcoT22I	ATGCAT	1 cut(s)	367
EcoT38I	GRGCYC	2 cut(s)	1013, 1679
ErhI	CCWWGG	3 cut(s)	225, 462, 731
Esp3I	CGTCTC	1 cut(s)	1283
FalI	AAGNNNNNCTT	2 cut(s)	884, 916
FaqI	GGGAC	2 cut(s)	740, 1360
FauNDI	CATATG	1 cut(s)	1257
FbaI	TGATCA	1 cut(s)	514
Fnu4HI	GCNGC	8 cut(s)	34, 207, 1145, 1530, 1539, 1542, 1566, 1638
FokI	GGATG	6 cut(s)	825, 894, 1277, 1456, 1468, 1605
FriOI	GRGCYC	2 cut(s)	1013, 1679
Fsp4HI	GCNGC	8 cut(s)	34, 207, 1145, 1530, 1539, 1542, 1566, 1638
FspBI	CTAG	2 cut(s)	1211, 1683
GlaI	GCGC	2 cut(s)	929, 1180
GluI	GCNGC	8 cut(s)	34, 207, 1145, 1530, 1539, 1542, 1566, 1638
GsuI	CTGGAG	2 cut(s)	643, 1011
HaeII	RGCGCY	1 cut(s)	1182
HaeIII	GGCC	3 cut(s)	134, 461, 665
HapII	CCGG	2 cut(s)	425, 705
HhaI	GCGC	2 cut(s)	930, 1181
Hin6I	GCGC	2 cut(s)	928, 1179
HinP1I	GCGC	2 cut(s)	928, 1179
HincII	GTYRAC	1 cut(s)	1123
HindII	GTYRAC	1 cut(s)	1123
HinfI	GANTC	5 cut(s)	19, 248, 827, 1432, 1520
HpaI	GTTAAC	1 cut(s)	1123
HpaII	CCGG	2 cut(s)	425, 705
Hpy166II	GTNNAC	5 cut(s)	636, 700, 1028, 1123, 1629
Hpy188III	TCNNGA	8 cut(s)	83, 94, 450, 518, 674, 1184, 1802, 1916
Hpy8I	GTNNAC	5 cut(s)	636, 700, 1028, 1123, 1629
HpyAV	CCTTC	7 cut(s)	311, 472, 542, 784, 886, 972, 1374
HpyCH4III	ACNGT	3 cut(s)	29, 308, 1601
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1178, 1535, 1538, 1571
HpyF3I	CTNAG	3 cut(s)	765, 1092, 1730
HspAI	GCGC	2 cut(s)	928, 1179
Ksp22I	TGATCA	1 cut(s)	514
KspAI	GTTAAC	1 cut(s)	1123
Kzo9I	GATC	5 cut(s)	201, 514, 1352, 1360, 1717
LmnI	GCTCC	6 cut(s)	662, 1581, 1604, 1674, 1939, 1960
Lsp1109I	GCAGC	8 cut(s)	45, 193, 1156, 1541, 1550, 1552, 1553, 1624
LweI	GCATC	7 cut(s)	76, 352, 364, 374, 872, 1061, 1779
MaeI	CTAG	2 cut(s)	1211, 1683
MaeIII	GTNAC	7 cut(s)	292, 385, 435, 489, 1407, 1463, 1609
MalI	GATC	5 cut(s)	203, 516, 1354, 1362, 1719
MboI	GATC	5 cut(s)	201, 514, 1352, 1360, 1717
MfeI	CAATTG	2 cut(s)	1074, 1379
MflI	RGATCY	1 cut(s)	1360
MhlI	GDGCHC	4 cut(s)	659, 692, 1013, 1679
MlyI	GAGTC	4 cut(s)	242, 836, 1441, 1514
MmeI	TCCRAC	1 cut(s)	1497
Mph1103I	ATGCAT	1 cut(s)	367
MroXI	GAANNNNTTC	2 cut(s)	116, 1923
MseI	TTAA	1 cut(s)	1122
MslI	CAYNNNNRTG	4 cut(s)	126, 467, 705, 1655
MspA1I	CMGCKG	1 cut(s)	750
MspI	CCGG	2 cut(s)	425, 705
MspR9I	CCNGG	8 cut(s)	425, 661, 705, 832, 970, 1152, 1422, 1623
MunI	CAATTG	2 cut(s)	1074, 1379
Mva1269I	GAATGC	1 cut(s)	718
MvaI	CCWGG	6 cut(s)	661, 832, 970, 1152, 1422, 1623
MwoI	GCNNNNNNNGC	4 cut(s)	1178, 1535, 1538, 1571
NciI	CCSGG	2 cut(s)	425, 705
NcoI	CCATGG	1 cut(s)	462
NdeI	CATATG	1 cut(s)	1257
NdeII	GATC	5 cut(s)	201, 514, 1352, 1360, 1717
NlaIV	GGNNCC	4 cut(s)	325, 525, 1362, 1583
NmuCI	GTSAC	4 cut(s)	292, 385, 435, 489
NsiI	ATGCAT	1 cut(s)	367
NspV	TTCGAA	1 cut(s)	180
OliI	CACNNNNGTG	1 cut(s)	705
PagI	TCATGA	2 cut(s)	673, 1915
PaqCI	CACCTGC	2 cut(s)	1144, 1534
PctI	GAATGC	1 cut(s)	718
PdmI	GAANNNNTTC	2 cut(s)	116, 1923
PfeI	GAWTC	1 cut(s)	19
PflMI	CCANNNNNTGG	1 cut(s)	141
PkrI	GCNGC	8 cut(s)	35, 208, 1146, 1531, 1540, 1543, 1567, 1639
PleI	GAGTC	4 cut(s)	242, 835, 1440, 1514
PpsI	GAGTC	4 cut(s)	242, 835, 1440, 1514
Psp124BI	GAGCTC	1 cut(s)	1679
Psp6I	CCWGG	6 cut(s)	659, 830, 968, 1150, 1420, 1621
PspGI	CCWGG	6 cut(s)	659, 830, 968, 1150, 1420, 1621
PspN4I	GGNNCC	4 cut(s)	325, 525, 1362, 1583
PspPI	GGNCC	3 cut(s)	663, 681, 1860
PstI	CTGCAG	1 cut(s)	1531
PsuI	RGATCY	1 cut(s)	1360
PvuII	CAGCTG	1 cut(s)	750
RsaI	GTAC	1 cut(s)	635
RsaNI	GTAC	1 cut(s)	634
RseI	CAYNNNNRTG	4 cut(s)	126, 467, 705, 1655
SacI	GAGCTC	1 cut(s)	1679
SaqAI	TTAA	1 cut(s)	1122
SatI	GCNGC	8 cut(s)	34, 207, 1145, 1530, 1539, 1542, 1566, 1638
Sau3AI	GATC	5 cut(s)	201, 514, 1352, 1360, 1717
Sau96I	GGNCC	3 cut(s)	663, 681, 1860
SchI	GAGTC	4 cut(s)	242, 836, 1441, 1514
ScrFI	CCNGG	8 cut(s)	425, 661, 705, 832, 970, 1152, 1422, 1623
SduI	GDGCHC	4 cut(s)	659, 692, 1013, 1679
SfaNI	GCATC	7 cut(s)	76, 352, 364, 374, 872, 1061, 1779
SfcI	CTRYAG	1 cut(s)	1527
SfuI	TTCGAA	1 cut(s)	180
SinI	GGWCC	2 cut(s)	681, 1860
SmiMI	CAYNNNNRTG	4 cut(s)	126, 467, 705, 1655
SmlI	CTYRAG	2 cut(s)	338, 448
SmoI	CTYRAG	2 cut(s)	338, 448
SsiI	CCGC	6 cut(s)	194, 321, 772, 853, 1579, 1937
SspMI	CTAG	2 cut(s)	1211, 1683
SstI	GAGCTC	1 cut(s)	1679
StyD4I	CCNGG	8 cut(s)	423, 659, 703, 830, 968, 1150, 1420, 1621
StyI	CCWWGG	3 cut(s)	225, 462, 731
TaaI	ACNGT	3 cut(s)	29, 308, 1601
TaqI	TCGA	2 cut(s)	84, 180
TaqII	GACCGA	1 cut(s)	698
TatI	WGTACW	1 cut(s)	633
TfiI	GAWTC	1 cut(s)	19
Tru1I	TTAA	1 cut(s)	1122
Tru9I	TTAA	1 cut(s)	1122
TscAI	CASTG	6 cut(s)	301, 311, 319, 394, 939, 991
TseFI	GTSAC	4 cut(s)	292, 385, 435, 489
TseI	GCWGC	8 cut(s)	33, 206, 1144, 1529, 1538, 1541, 1565, 1637
Tsp45I	GTSAC	4 cut(s)	292, 385, 435, 489
TspDTI	ATGAA	7 cut(s)	24, 827, 1460, 1565, 1582, 1904, 1932
TspGWI	ACGGA	3 cut(s)	1445, 1887, 1917
TspRI	CASTG	6 cut(s)	301, 311, 319, 394, 939, 991
Van91I	CCANNNNNTGG	1 cut(s)	141
VpaK11BI	GGWCC	2 cut(s)	681, 1860
XagI	CCTNNNNNAGG	1 cut(s)	866
XapI	RAATTY	4 cut(s)	11, 1205, 1552, 1704
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1818
XmnI	GAANNNNTTC	2 cut(s)	116, 1923
XspI	CTAG	2 cut(s)	1211, 1683
Zsp2I	ATGCAT	1 cut(s)	367

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.