Polypyrimidine tract-binding protein homolog
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G53180 AT5G53180 AT5G53180 AT5G53180 AT5G53180 AT5G53180 |
| fragaria_vesca | FvH4_7g31120 |
| malus_domestica | MD01G1216000.v1.1 MD07G1285900.v1.1 |
| prunus_persica | Prupe.2G308000_v2.0.a1 |
| pyrus_communis | pycom01g22680 pycom07g25930 |
| rosa_chinensis | RchiOBHm_Chr1g0380181 |
| rosa_laevigata | RLG00000026322 |
| rosa_multiflora | Rmu_co8519101.1_g000001 Rmu_sc0001232.1_g000021 Rmu_sc0016989.1_g000003 |
| rosa_roxburghii | Rroxscaffold_4G00279590 |
| rosa_rugosa | Rorug01G0418700 |
| rosa_samantha | Rh1AG443600 Rh1BG398500 Rh1CG411900 Rh1DG429200 |
| rosa_wichuraiana | Rw1G038520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 564 |
| Acc65I | GGTACC | 1 cut(s) | 1168 |
| AccB1I | GGYRCC | 1 cut(s) | 1168 |
| AccI | GTMKAC | 1 cut(s) | 267 |
| AccII | CGCG | 1 cut(s) | 1286 |
| AciI | CCGC | 1 cut(s) | 449 |
| AcsI | RAATTY | 4 cut(s) | 182, 505, 608, 1297 |
| AcuI | CTGAAG | 1 cut(s) | 1140 |
| AdeI | CACNNNGTG | 1 cut(s) | 144 |
| AfaI | GTAC | 6 cut(s) | 57, 88, 278, 336, 1170, 1248 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 912, 1160 |
| AgsI | TTSAA | 4 cut(s) | 107, 182, 196, 353 |
| AjiI | CACGTC | 2 cut(s) | 952, 965 |
| AjnI | CCWGG | 2 cut(s) | 393, 1264 |
| AluBI | AGCT | 7 cut(s) | 173, 203, 407, 534, 887, 946, 1091 |
| AluI | AGCT | 7 cut(s) | 173, 203, 407, 534, 887, 946, 1091 |
| Alw21I | GWGCWC | 1 cut(s) | 1117 |
| Alw26I | GTCTC | 3 cut(s) | 572, 958, 1002 |
| Alw44I | GTGCAC | 1 cut(s) | 1113 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 463 |
| AoxI | GGCC | 1 cut(s) | 809 |
| ApaLI | GTGCAC | 1 cut(s) | 1113 |
| ApeKI | GCWGC | 3 cut(s) | 314, 1091, 1288 |
| ApoI | RAATTY | 4 cut(s) | 182, 505, 608, 1297 |
| Asp718I | GGTACC | 1 cut(s) | 1168 |
| AspLEI | GCGC | 2 cut(s) | 1286, 1288 |
| AspS9I | GGNCC | 4 cut(s) | 466, 557, 809, 1262 |
| AsuC2I | CCSGG | 1 cut(s) | 1278 |
| AsuHPI | GGTGA | 2 cut(s) | 368, 1048 |
| AvaII | GGWCC | 3 cut(s) | 466, 557, 1262 |
| BaeGI | GKGCMC | 1 cut(s) | 1117 |
| BanI | GGYRCC | 1 cut(s) | 1168 |
| BbsI | GAAGAC | 2 cut(s) | 449, 787 |
| Bbv12I | GWGCWC | 1 cut(s) | 1117 |
| BbvI | GCAGC | 3 cut(s) | 301, 1078, 1300 |
| BccI | CCATC | 8 cut(s) | 55, 509, 668, 670, 698, 755, 923, 1243 |
| BceAI | ACGGC | 2 cut(s) | 61, 383 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1195, 1229 |
| BciT130I | CCWGG | 2 cut(s) | 395, 1266 |
| BciVI | GTATCC | 1 cut(s) | 879 |
| BcnI | CCSGG | 1 cut(s) | 1278 |
| BcoDI | GTCTC | 3 cut(s) | 572, 958, 1002 |
| BfaI | CTAG | 2 cut(s) | 531, 1058 |
| BfmI | CTRYAG | 4 cut(s) | 272, 315, 1128, 1173 |
| BfuI | GTATCC | 1 cut(s) | 879 |
| BisI | GCNGC | 3 cut(s) | 315, 1092, 1289 |
| BlsI | GCNGC | 3 cut(s) | 316, 1093, 1290 |
| BmcAI | AGTACT | 1 cut(s) | 278 |
| Bme1390I | CCNGG | 3 cut(s) | 395, 1266, 1278 |
| Bme18I | GGWCC | 3 cut(s) | 466, 557, 1262 |
| BmgBI | CACGTC | 2 cut(s) | 952, 965 |
| BmgT120I | GGNCC | 4 cut(s) | 466, 557, 809, 1262 |
| BmiI | GGNNCC | 3 cut(s) | 558, 1170, 1263 |
| BmrFI | CCNGG | 3 cut(s) | 395, 1266, 1278 |
| BmrI | ACTGGG | 1 cut(s) | 119 |
| BmsI | GCATC | 8 cut(s) | 352, 469, 487, 752, 1134, 1197, 1203, 1263 |
| BmuI | ACTGGG | 1 cut(s) | 119 |
| BpiI | GAAGAC | 2 cut(s) | 449, 787 |
| BpuEI | CTTGAG | 1 cut(s) | 231 |
| BpuMI | CCSGG | 1 cut(s) | 1278 |
| BsaJI | CCNNGG | 5 cut(s) | 51, 77, 492, 774, 906 |
| BsaWI | WCCGGW | 1 cut(s) | 162 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 912, 1160 |
| Bse118I | RCCGGY | 1 cut(s) | 241 |
| Bse1I | ACTGG | 5 cut(s) | 15, 114, 468, 516, 1070 |
| Bse3DI | GCAATG | 2 cut(s) | 154, 916 |
| BseBI | CCWGG | 2 cut(s) | 395, 1266 |
| BseDI | CCNNGG | 5 cut(s) | 51, 77, 492, 774, 906 |
| BseGI | GGATG | 6 cut(s) | 47, 502, 520, 525, 709, 743 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 912, 1160 |
| BseMI | GCAATG | 2 cut(s) | 154, 916 |
| BseMII | CTCAG | 5 cut(s) | 53, 583, 714, 991, 1208 |
| BseNI | ACTGG | 5 cut(s) | 15, 114, 468, 516, 1070 |
| BsePI | GCGCGC | 1 cut(s) | 1284 |
| BseRI | GAGGAG | 2 cut(s) | 107, 1086 |
| BseSI | GKGCMC | 1 cut(s) | 1117 |
| BseXI | GCAGC | 3 cut(s) | 301, 1078, 1300 |
| BseYI | CCCAGC | 1 cut(s) | 1087 |
| BsgI | GTGCAG | 1 cut(s) | 770 |
| Bsh1236I | CGCG | 1 cut(s) | 1286 |
| BshFI | GGCC | 1 cut(s) | 811 |
| BshNI | GGYRCC | 1 cut(s) | 1168 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1117 |
| BsiSI | CCGG | 3 cut(s) | 163, 242, 1277 |
| BslFI | GGGAC | 2 cut(s) | 570, 644 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 912, 1160 |
| BsmAI | GTCTC | 3 cut(s) | 572, 958, 1002 |
| BsmBI | CGTCTC | 1 cut(s) | 958 |
| BsmFI | GGGAC | 2 cut(s) | 570, 644 |
| BsnI | GGCC | 1 cut(s) | 811 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1117 |
| Bsp1407I | TGTACA | 1 cut(s) | 86 |
| Bsp143I | GATC | 2 cut(s) | 822, 973 |
| BspACI | CCGC | 1 cut(s) | 449 |
| BspANI | GGCC | 1 cut(s) | 811 |
| BspCNI | CTCAG | 5 cut(s) | 52, 582, 715, 990, 1207 |
| BspFNI | CGCG | 1 cut(s) | 1286 |
| BspLI | GGNNCC | 3 cut(s) | 558, 1170, 1263 |
| BspMAI | CTGCAG | 1 cut(s) | 319 |
| BspT107I | GGYRCC | 1 cut(s) | 1168 |
| BsrDI | GCAATG | 2 cut(s) | 154, 916 |
| BsrFI | RCCGGY | 1 cut(s) | 241 |
| BsrGI | TGTACA | 1 cut(s) | 86 |
| BsrI | ACTGG | 5 cut(s) | 15, 114, 468, 516, 1070 |
| BssAI | RCCGGY | 1 cut(s) | 241 |
| BssECI | CCNNGG | 5 cut(s) | 51, 77, 492, 774, 906 |
| BssHII | GCGCGC | 1 cut(s) | 1284 |
| BssMI | GATC | 2 cut(s) | 822, 973 |
| BssT1I | CCWWGG | 3 cut(s) | 51, 774, 906 |
| Bst2UI | CCWGG | 2 cut(s) | 395, 1266 |
| Bst4CI | ACNGT | 7 cut(s) | 27, 265, 276, 1027, 1106, 1177, 1246 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 323, 488, 1121 |
| BstAUI | TGTACA | 1 cut(s) | 86 |
| BstC8I | GCNNGC | 2 cut(s) | 944, 1286 |
| BstDEI | CTNAG | 5 cut(s) | 39, 569, 723, 977, 1194 |
| BstDSI | CCRYGG | 2 cut(s) | 77, 492 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1158 |
| BstF5I | GGATG | 6 cut(s) | 47, 502, 520, 525, 709, 743 |
| BstFNI | CGCG | 1 cut(s) | 1286 |
| BstHHI | GCGC | 2 cut(s) | 1286, 1288 |
| BstKTI | GATC | 2 cut(s) | 825, 976 |
| BstMAI | GTCTC | 3 cut(s) | 572, 958, 1002 |
| BstMBI | GATC | 2 cut(s) | 822, 973 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 323, 488, 497, 665, 893, 902, 1121 |
| BstNI | CCWGG | 2 cut(s) | 395, 1266 |
| BstNSI | RCATGY | 2 cut(s) | 760, 1234 |
| BstSCI | CCNGG | 3 cut(s) | 393, 1264, 1276 |
| BstSFI | CTRYAG | 4 cut(s) | 272, 315, 1128, 1173 |
| BstSLI | GKGCMC | 1 cut(s) | 1117 |
| BstUI | CGCG | 1 cut(s) | 1286 |
| BstV1I | GCAGC | 3 cut(s) | 301, 1078, 1300 |
| BstV2I | GAAGAC | 2 cut(s) | 449, 787 |
| BsuI | GTATCC | 1 cut(s) | 879 |
| BsuRI | GGCC | 1 cut(s) | 811 |
| BtgI | CCRYGG | 2 cut(s) | 77, 492 |
| BtrI | CACGTC | 2 cut(s) | 952, 965 |
| BtsCI | GGATG | 6 cut(s) | 47, 502, 520, 525, 709, 743 |
| BtsIMutI | CAGTG | 4 cut(s) | 15, 461, 509, 1111 |
| Cac8I | GCNNGC | 2 cut(s) | 944, 1286 |
| CaiI | CAGNNNCTG | 1 cut(s) | 463 |
| CfoI | GCGC | 2 cut(s) | 1286, 1288 |
| Cfr10I | RCCGGY | 1 cut(s) | 241 |
| Cfr13I | GGNCC | 4 cut(s) | 466, 557, 809, 1262 |
| CsiI | ACCWGGT | 1 cut(s) | 393 |
| Csp6I | GTAC | 6 cut(s) | 56, 87, 277, 335, 1169, 1247 |
| CviAII | CATG | 8 cut(s) | 757, 790, 829, 1078, 1201, 1231, 1270, 1322 |
| CviQI | GTAC | 6 cut(s) | 56, 87, 277, 335, 1169, 1247 |
| DdeI | CTNAG | 5 cut(s) | 39, 569, 723, 977, 1194 |
| DpnI | GATC | 2 cut(s) | 824, 975 |
| DpnII | GATC | 2 cut(s) | 822, 973 |
| DraIII | CACNNNGTG | 1 cut(s) | 144 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 564 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 564 |
| Eco130I | CCWWGG | 3 cut(s) | 51, 774, 906 |
| Eco32I | GATATC | 1 cut(s) | 216 |
| Eco47I | GGWCC | 3 cut(s) | 466, 557, 1262 |
| Eco57I | CTGAAG | 1 cut(s) | 1140 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1158 |
| EcoO109I | RGGNCCY | 2 cut(s) | 557, 1262 |
| EcoRII | CCWGG | 2 cut(s) | 393, 1264 |
| EcoRV | GATATC | 1 cut(s) | 216 |
| EcoT14I | CCWWGG | 3 cut(s) | 51, 774, 906 |
| ErhI | CCWWGG | 3 cut(s) | 51, 774, 906 |
| Esp3I | CGTCTC | 1 cut(s) | 958 |
| FaeI | CATG | 8 cut(s) | 760, 793, 832, 1081, 1204, 1234, 1273, 1325 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 890, 922 |
| FaqI | GGGAC | 2 cut(s) | 570, 644 |
| FatI | CATG | 8 cut(s) | 756, 789, 828, 1077, 1200, 1230, 1269, 1321 |
| FauI | CCCGC | 1 cut(s) | 442 |
| FblI | GTMKAC | 1 cut(s) | 267 |
| Fnu4HI | GCNGC | 3 cut(s) | 315, 1092, 1289 |
| FokI | GGATG | 6 cut(s) | 34, 509, 512, 527, 716, 730 |
| Fsp4HI | GCNGC | 3 cut(s) | 315, 1092, 1289 |
| FspBI | CTAG | 2 cut(s) | 531, 1058 |
| GlaI | GCGC | 2 cut(s) | 1285, 1287 |
| GluI | GCNGC | 3 cut(s) | 315, 1092, 1289 |
| GsaI | CCCAGC | 1 cut(s) | 1091 |
| HaeIII | GGCC | 1 cut(s) | 811 |
| HapII | CCGG | 3 cut(s) | 163, 242, 1277 |
| HhaI | GCGC | 2 cut(s) | 1286, 1288 |
| Hin1II | CATG | 8 cut(s) | 760, 793, 832, 1081, 1204, 1234, 1273, 1325 |
| Hin6I | GCGC | 2 cut(s) | 1284, 1286 |
| HinP1I | GCGC | 2 cut(s) | 1284, 1286 |
| HindIII | AAGCTT | 2 cut(s) | 171, 944 |
| HinfI | GANTC | 5 cut(s) | 166, 196, 616, 862, 1054 |
| HpaII | CCGG | 3 cut(s) | 163, 242, 1277 |
| HphI | GGTGA | 2 cut(s) | 368, 1048 |
| Hpy166II | GTNNAC | 8 cut(s) | 87, 136, 268, 301, 991, 1039, 1075, 1115 |
| Hpy188I | TCNGA | 6 cut(s) | 32, 238, 478, 615, 687, 882 |
| Hpy188III | TCNNGA | 5 cut(s) | 571, 585, 751, 872, 1239 |
| Hpy8I | GTNNAC | 8 cut(s) | 87, 136, 268, 301, 991, 1039, 1075, 1115 |
| HpyAV | CCTTC | 4 cut(s) | 347, 659, 1164, 1200 |
| HpyCH4III | ACNGT | 7 cut(s) | 27, 265, 276, 1027, 1106, 1177, 1246 |
| HpyCH4IV | ACGT | 4 cut(s) | 732, 780, 951, 964 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 323, 488, 497, 665, 893, 902, 1121 |
| HpyF3I | CTNAG | 5 cut(s) | 39, 569, 723, 977, 1194 |
| HpySE526I | ACGT | 4 cut(s) | 732, 780, 951, 964 |
| Hsp92II | CATG | 8 cut(s) | 760, 793, 832, 1081, 1204, 1234, 1273, 1325 |
| HspAI | GCGC | 2 cut(s) | 1284, 1286 |
| KpnI | GGTACC | 1 cut(s) | 1172 |
| Kzo9I | GATC | 2 cut(s) | 822, 973 |
| LmnI | GCTCC | 6 cut(s) | 155, 546, 664, 1002, 1099, 1129 |
| Lsp1109I | GCAGC | 3 cut(s) | 301, 1078, 1300 |
| LweI | GCATC | 8 cut(s) | 352, 469, 487, 752, 1134, 1197, 1203, 1263 |
| MabI | ACCWGGT | 1 cut(s) | 393 |
| MaeI | CTAG | 2 cut(s) | 531, 1058 |
| MaeII | ACGT | 4 cut(s) | 732, 780, 951, 964 |
| MaeIII | GTNAC | 3 cut(s) | 343, 728, 769 |
| MalI | GATC | 2 cut(s) | 824, 975 |
| MboI | GATC | 2 cut(s) | 822, 973 |
| MboII | GAAGA | 4 cut(s) | 371, 454, 531, 787 |
| MfeI | CAATTG | 1 cut(s) | 348 |
| MhlI | GDGCHC | 1 cut(s) | 1117 |
| MluCI | AATT | 8 cut(s) | 182, 348, 470, 486, 505, 608, 1118, 1297 |
| MlyI | GAGTC | 1 cut(s) | 625 |
| MmeI | TCCRAC | 1 cut(s) | 133 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1205 |
| MspA1I | CMGCKG | 3 cut(s) | 449, 887, 1091 |
| MspI | CCGG | 3 cut(s) | 163, 242, 1277 |
| MspR9I | CCNGG | 3 cut(s) | 395, 1266, 1278 |
| MunI | CAATTG | 1 cut(s) | 348 |
| MvaI | CCWGG | 2 cut(s) | 395, 1266 |
| MvnI | CGCG | 1 cut(s) | 1286 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 323, 488, 497, 665, 893, 902, 1121 |
| NciI | CCSGG | 1 cut(s) | 1278 |
| NdeII | GATC | 2 cut(s) | 822, 973 |
| NlaIII | CATG | 8 cut(s) | 760, 793, 832, 1081, 1204, 1234, 1273, 1325 |
| NlaIV | GGNNCC | 3 cut(s) | 558, 1170, 1263 |
| NspI | RCATGY | 2 cut(s) | 760, 1234 |
| PauI | GCGCGC | 1 cut(s) | 1284 |
| PfeI | GAWTC | 4 cut(s) | 166, 196, 862, 1054 |
| PkrI | GCNGC | 3 cut(s) | 316, 1093, 1290 |
| PleI | GAGTC | 1 cut(s) | 624 |
| PpsI | GAGTC | 1 cut(s) | 624 |
| PpuMI | RGGWCCY | 2 cut(s) | 557, 1262 |
| Psp5II | RGGWCCY | 2 cut(s) | 557, 1262 |
| Psp6I | CCWGG | 2 cut(s) | 393, 1264 |
| PspFI | CCCAGC | 1 cut(s) | 1087 |
| PspGI | CCWGG | 2 cut(s) | 393, 1264 |
| PspN4I | GGNNCC | 3 cut(s) | 558, 1170, 1263 |
| PspPI | GGNCC | 4 cut(s) | 466, 557, 809, 1262 |
| PspPPI | RGGWCCY | 2 cut(s) | 557, 1262 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1161, 1193 |
| PstI | CTGCAG | 1 cut(s) | 319 |
| PstNI | CAGNNNCTG | 1 cut(s) | 463 |
| PteI | GCGCGC | 1 cut(s) | 1284 |
| PvuII | CAGCTG | 2 cut(s) | 887, 1091 |
| RsaI | GTAC | 6 cut(s) | 57, 88, 278, 336, 1170, 1248 |
| RsaNI | GTAC | 6 cut(s) | 56, 87, 277, 335, 1169, 1247 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1205 |
| SatI | GCNGC | 3 cut(s) | 315, 1092, 1289 |
| Sau3AI | GATC | 2 cut(s) | 822, 973 |
| Sau96I | GGNCC | 4 cut(s) | 466, 557, 809, 1262 |
| ScaI | AGTACT | 1 cut(s) | 278 |
| SchI | GAGTC | 1 cut(s) | 625 |
| ScrFI | CCNGG | 3 cut(s) | 395, 1266, 1278 |
| SduI | GDGCHC | 1 cut(s) | 1117 |
| SexAI | ACCWGGT | 1 cut(s) | 393 |
| SfaNI | GCATC | 8 cut(s) | 352, 469, 487, 752, 1134, 1197, 1203, 1263 |
| SfcI | CTRYAG | 4 cut(s) | 272, 315, 1128, 1173 |
| SinI | GGWCC | 3 cut(s) | 466, 557, 1262 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1205 |
| SmlI | CTYRAG | 1 cut(s) | 246 |
| SmoI | CTYRAG | 1 cut(s) | 246 |
| Sse9I | AATT | 8 cut(s) | 182, 348, 470, 486, 505, 608, 1118, 1297 |
| SsiI | CCGC | 1 cut(s) | 449 |
| SspMI | CTAG | 2 cut(s) | 531, 1058 |
| StyD4I | CCNGG | 3 cut(s) | 393, 1264, 1276 |
| StyI | CCWWGG | 3 cut(s) | 51, 774, 906 |
| TaaI | ACNGT | 7 cut(s) | 27, 265, 276, 1027, 1106, 1177, 1246 |
| TaiI | ACGT | 4 cut(s) | 735, 783, 954, 967 |
| TaqI | TCGA | 3 cut(s) | 622, 750, 1052 |
| TasI | AATT | 8 cut(s) | 182, 348, 470, 486, 505, 608, 1118, 1297 |
| TatI | WGTACW | 3 cut(s) | 86, 276, 334 |
| TfiI | GAWTC | 4 cut(s) | 166, 196, 862, 1054 |
| TscAI | CASTG | 4 cut(s) | 15, 468, 516, 1111 |
| TseI | GCWGC | 3 cut(s) | 314, 1091, 1288 |
| TspDTI | ATGAA | 1 cut(s) | 1097 |
| TspGWI | ACGGA | 1 cut(s) | 509 |
| TspRI | CASTG | 4 cut(s) | 15, 468, 516, 1111 |
| VneI | GTGCAC | 1 cut(s) | 1113 |
| VpaK11BI | GGWCC | 3 cut(s) | 466, 557, 1262 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1158 |
| XapI | RAATTY | 4 cut(s) | 182, 505, 608, 1297 |
| XceI | RCATGY | 2 cut(s) | 760, 1234 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1262 |
| XmiI | GTMKAC | 1 cut(s) | 267 |
| XspI | CTAG | 2 cut(s) | 531, 1058 |
| ZrmI | AGTACT | 1 cut(s) | 278 |