Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0007635

Physical Location & Seq

Genomic Coordinates Forward (+)

20174892 .. 20178615

Gene Structure 3724 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g22680.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1317 bp

ATGGCTTCTGTGTCCAGTCAGCCACAGTTCCGGTACACTCAGCCACCATCTAAGGTGCTTCATTTGAGGAACTTGCCGTGGGAGTGTACAGAGGAGGAATTGATAGAACTGGGAAAACCGTTTGGTAAAGTTGTCAACACAAAGTGCAATGTAGGAGCAAACCGTAACCAGGCATTTATTGAATTTGCAGATTTAAATCAAGCTATTGCAATGATATCATATTATGCGTCATCTTCAGAACCTGCTCAAGTAAGAGGGAAAACTGTTTACCTACAGTACTCCAACAGGCAAGAAATAGTGAACAACAAAACTGCCGCGGATGTTGCAGGAAATGTACTGTTAGTAACAATTGAAGGTGCGGATGCACGCCTTGTCAGCATAGATATTTTACACCTGGTATTTTCAGCTTTTGGGTTTGTGCACAAGATAACTACTTTTGAGAAGACTGCGGGATTCCAGGCACTCGTGCAATTTTCAGATGCAGAAACTGCCACTTCTGCCAAAACTGCACTGGATTCAAGAATCATCCCTAGGTATCTGCTTCCCGAGCATGTGGGACCATGTACTCTCAGGATAACATATTCTGGACACACTGATTTGAGTGTGAAATTTCAAAGTCACCGAAGCAGGGACTACACTAATCCTAACCTTCCAGTTGCTCCATCAGCCATAGATGGAAGTGGTCAGCTAATTGTGGGATTGGATGGGAAAAAGCTAGAACCGGAGAGTAATGTGCTTCTTGCATCCATCGAAAACATGCAGTATGCTGTCACCTTGGACGTTTTACACATGGTCTTTTCTGCTTTCGGGCCTATTCAAAAGATCGCCATGTTTGATAAGAATGGAGGGGTTCAGGCCTTGATTCAGTATCCAGAGGTTCAGACGGCTGTTGTTGCCAAGGAGGCCTTAGAAGGGCACTCCATATATGATGGAGGGTTCTGCAAGCTCCACATCTCATATTCACGCCATACCGATCTCAGCATAAAGGTGAACAATGATCGGAGCAGAGACTATACAATCCCTACCATTCCAATTGTGGCCGCACAACCGTCAATTCTGGGACAACAGCCAGTTCATCAGAGTGCCACGGTGCCTCCATACAGCGGGGCTCAGTATGCTGATCAGGCTGTGATGCCTCAGCCTTCTGCAGGGTGGGGACCAACTGTTCCGGCAGTTCCTCAGTCCATGCCATTTCAGATGCATAATCAACCGTACATGCCACCCGGAACTATACCTATATCTTCTCCTCAAATGGGCCCTGGGATGATGCAGAGTGGTCCGCCGCCTCCGCCCTATCACCATGGTCATGTGCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000381 GO:0000932 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006417 GO:0007275 GO:0008150 GO:0009791 GO:0009845 GO:0009889 GO:0010468 GO:0010556 GO:0010608 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0032268 GO:0032501 GO:0032502 GO:0032991 GO:0034248 GO:0035770 GO:0036464 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043484 GO:0044424 GO:0044444 GO:0044464 GO:0048024 GO:0048856 GO:0050684 GO:0050789 GO:0050794 GO:0051171 GO:0051246 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0090351 GO:0097159 GO:1901363 GO:1903311 GO:1990904 GO:2000112

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 RRM_5

Protein Analysis

439

Amino Acids

47.75

Weight (kDa)

6.42

Isoelectric Point (pI)

53.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	22 - 73	7.9e-08	RNA recognition motif
RRM_8	PF11835	243 - 321	5.5e-08	RRM-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007635)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G53180 AT5G53180 AT5G53180 AT5G53180 AT5G53180 AT5G53180
fragaria_vesca	FvH4_7g31120
malus_domestica	MD01G1216000.v1.1 MD07G1285900.v1.1
prunus_persica	Prupe.2G308000_v2.0.a1
pyrus_communis	pycom01g22680 pycom07g25930
rosa_chinensis	RchiOBHm_Chr1g0380181
rosa_laevigata	RLG00000026322
rosa_multiflora	Rmu_co8519101.1_g000001 Rmu_sc0001232.1_g000021 Rmu_sc0016989.1_g000003
rosa_roxburghii	Rroxscaffold_4G00279590
rosa_rugosa	Rorug01G0418700
rosa_samantha	Rh1AG443600 Rh1BG398500 Rh1CG411900 Rh1DG429200
rosa_wichuraiana	Rw1G038520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	250
AccB1I	GGYRCC	1 cut(s)	1090
AccII	CGCG	1 cut(s)	317
AciI	CCGC	9 cut(s)	315, 317, 359, 449, 1041, 1104, 1280, 1283, 1289
AcoI	YGGCCR	1 cut(s)	1038
AcsI	RAATTY	2 cut(s)	182, 608
AcuI	CTGAAG	1 cut(s)	219
AdeI	CACNNNGTG	1 cut(s)	144
AfaI	GTAC	6 cut(s)	35, 88, 278, 336, 565, 1214
AfiI	CCNNNNNNNGG	6 cut(s)	169, 628, 912, 1103, 1148, 1253
AgsI	TTSAA	5 cut(s)	182, 353, 519, 614, 818
AjnI	CCWGG	4 cut(s)	168, 393, 456, 1258
AloI	GAACNNNNNNTCC	2 cut(s)	1149, 1181
AluBI	AGCT	5 cut(s)	203, 407, 688, 715, 946
AluI	AGCT	5 cut(s)	203, 407, 688, 715, 946
Alw21I	GWGCWC	1 cut(s)	423
Alw26I	GTCTC	1 cut(s)	1002
Alw44I	GTGCAC	1 cut(s)	419
AlwNI	CAGNNNCTG	2 cut(s)	242, 488
Ama87I	CYCGRG	1 cut(s)	545
AoxI	GGCC	5 cut(s)	809, 855, 903, 1038, 1255
ApaI	GGGCCC	1 cut(s)	1259
ApaLI	GTGCAC	1 cut(s)	419
ApoI	RAATTY	2 cut(s)	182, 608
AspA2I	CCTAGG	1 cut(s)	530
AspS9I	GGNCC	6 cut(s)	557, 809, 1157, 1255, 1256, 1277
AsuC2I	CCSGG	1 cut(s)	1224
AsuHPI	GGTGA	4 cut(s)	611, 763, 1000, 1289
AvaI	CYCGRG	1 cut(s)	545
AvaII	GGWCC	3 cut(s)	557, 1157, 1277
AvrII	CCTAGG	1 cut(s)	530
BaeGI	GKGCMC	3 cut(s)	423, 918, 1259
BanI	GGYRCC	1 cut(s)	1090
BanII	GRGCYC	2 cut(s)	1111, 1259
BauI	CACGAG	1 cut(s)	464
BbsI	GAAGAC	1 cut(s)	449
Bbv12I	GWGCWC	1 cut(s)	423
BbvCI	CCTCAGC	1 cut(s)	1137
BccI	CCATC	6 cut(s)	55, 668, 670, 698, 755, 923
BceAI	ACGGC	2 cut(s)	61, 900
BciT130I	CCWGG	4 cut(s)	170, 395, 458, 1260
BciVI	GTATCC	1 cut(s)	879
BclI	TGATCA	1 cut(s)	1120
BcnI	CCSGG	1 cut(s)	1224
BcoDI	GTCTC	1 cut(s)	1002
BfaI	CTAG	2 cut(s)	531, 716
BfmI	CTRYAG	2 cut(s)	272, 1146
BfuAI	ACCTGC	1 cut(s)	250
BfuI	GTATCC	1 cut(s)	879
BglI	GCCNNNNNGGC	1 cut(s)	902
BisI	GCNGC	3 cut(s)	315, 1041, 1283
BlnI	CCTAGG	1 cut(s)	530
BlsI	GCNGC	3 cut(s)	316, 1042, 1284
BmcAI	AGTACT	1 cut(s)	278
Bme1390I	CCNGG	5 cut(s)	170, 395, 458, 1224, 1260
Bme18I	GGWCC	3 cut(s)	557, 1157, 1277
BmeT110I	CYCGRG	1 cut(s)	545
BmgT120I	GGNCC	6 cut(s)	557, 809, 1157, 1255, 1256, 1277
BmiI	GGNNCC	4 cut(s)	558, 1092, 1158, 1257
BmrFI	CCNGG	5 cut(s)	170, 395, 458, 1224, 1260
BmrI	ACTGGG	1 cut(s)	119
BmsI	GCATC	6 cut(s)	352, 469, 752, 1122, 1188, 1257
BmuI	ACTGGG	1 cut(s)	119
BpiI	GAAGAC	1 cut(s)	449
Bpu10I	CCTNAGC	1 cut(s)	1137
BpuEI	CTTGAG	1 cut(s)	231
BpuMI	CCSGG	1 cut(s)	1224
BsaBI	GATNNNNATC	1 cut(s)	195
BsaJI	CCNNGG	9 cut(s)	77, 315, 530, 774, 897, 1086, 1258, 1259, 1300
BsaWI	WCCGGW	2 cut(s)	30, 721
BsaXI	ACNNNNNCTCC	2 cut(s)	1078, 1108
Bsc4I	CCNNNNNNNGG	6 cut(s)	169, 628, 912, 1103, 1148, 1253
Bse1I	ACTGG	5 cut(s)	15, 114, 516, 653, 1070
Bse3DI	GCAATG	2 cut(s)	154, 216
Bse8I	GATNNNNATC	1 cut(s)	195
BseBI	CCWGG	4 cut(s)	170, 395, 458, 1260
BseDI	CCNNGG	9 cut(s)	77, 315, 530, 774, 897, 1086, 1258, 1259, 1300
BseGI	GGATG	6 cut(s)	325, 367, 525, 709, 743, 1269
BseJI	GATNNNNATC	1 cut(s)	195
BseLI	CCNNNNNNNGG	6 cut(s)	169, 628, 912, 1103, 1148, 1253
BseMI	GCAATG	2 cut(s)	154, 216
BseMII	CTCAG	6 cut(s)	53, 583, 991, 1124, 1151, 1193
BseNI	ACTGG	5 cut(s)	15, 114, 516, 653, 1070
BseRI	GAGGAG	2 cut(s)	107, 1236
BseSI	GKGCMC	3 cut(s)	423, 918, 1259
BsgI	GTGCAG	1 cut(s)	492
Bsh1236I	CGCG	1 cut(s)	317
BshFI	GGCC	5 cut(s)	811, 857, 905, 1040, 1257
BshNI	GGYRCC	1 cut(s)	1090
BsiHKAI	GWGCWC	1 cut(s)	423
BsiHKCI	CYCGRG	1 cut(s)	545
BsiSI	CCGG	4 cut(s)	31, 722, 1169, 1224
BslFI	GGGAC	4 cut(s)	570, 644, 1074, 1170
BslI	CCNNNNNNNGG	6 cut(s)	169, 628, 912, 1103, 1148, 1253
BsmAI	GTCTC	1 cut(s)	1002
BsmFI	GGGAC	4 cut(s)	570, 644, 1074, 1170
BsnI	GGCC	5 cut(s)	811, 857, 905, 1040, 1257
BsoBI	CYCGRG	1 cut(s)	545
Bsp120I	GGGCCC	1 cut(s)	1255
Bsp1286I	GDGCHC	4 cut(s)	423, 918, 1111, 1259
Bsp1407I	TGTACA	1 cut(s)	86
Bsp143I	GATC	4 cut(s)	822, 973, 997, 1120
Bsp19I	CCATGG	1 cut(s)	1300
BspACI	CCGC	9 cut(s)	315, 317, 359, 449, 1041, 1104, 1280, 1283, 1289
BspANI	GGCC	5 cut(s)	811, 857, 905, 1040, 1257
BspCNI	CTCAG	6 cut(s)	52, 582, 990, 1123, 1150, 1192
BspFNI	CGCG	1 cut(s)	317
BspLI	GGNNCC	4 cut(s)	558, 1092, 1158, 1257
BspMAI	CTGCAG	1 cut(s)	1150
BspMI	ACCTGC	1 cut(s)	250
BspT107I	GGYRCC	1 cut(s)	1090
BsrDI	GCAATG	2 cut(s)	154, 216
BsrGI	TGTACA	1 cut(s)	86
BsrI	ACTGG	5 cut(s)	15, 114, 516, 653, 1070
BssECI	CCNNGG	9 cut(s)	77, 315, 530, 774, 897, 1086, 1258, 1259, 1300
BssMI	GATC	4 cut(s)	822, 973, 997, 1120
BssSI	CACGAG	1 cut(s)	464
BssT1I	CCWWGG	4 cut(s)	530, 774, 897, 1300
Bst2BI	CACGAG	1 cut(s)	464
Bst2UI	CCWGG	4 cut(s)	170, 395, 458, 1260
BstAPI	GCANNNNNTGC	1 cut(s)	488
BstAUI	TGTACA	1 cut(s)	86
BstC8I	GCNNGC	2 cut(s)	367, 944
BstDEI	CTNAG	8 cut(s)	39, 51, 569, 907, 977, 1110, 1137, 1179
BstDSI	CCRYGG	4 cut(s)	77, 315, 1086, 1300
BstENI	CCTNNNNNAGG	1 cut(s)	1146
BstF5I	GGATG	6 cut(s)	325, 367, 525, 709, 743, 1269
BstFNI	CGCG	1 cut(s)	317
BstKTI	GATC	4 cut(s)	825, 976, 1000, 1123
BstMAI	GTCTC	1 cut(s)	1002
BstMBI	GATC	4 cut(s)	822, 973, 997, 1120
BstNI	CCWGG	4 cut(s)	170, 395, 458, 1260
BstNSI	RCATGY	3 cut(s)	554, 760, 1219
BstSCI	CCNGG	5 cut(s)	168, 393, 456, 1222, 1258
BstSFI	CTRYAG	2 cut(s)	272, 1146
BstSLI	GKGCMC	3 cut(s)	423, 918, 1259
BstUI	CGCG	1 cut(s)	317
BstV2I	GAAGAC	1 cut(s)	449
BsuI	GTATCC	1 cut(s)	879
BsuRI	GGCC	5 cut(s)	811, 857, 905, 1040, 1257
BtgI	CCRYGG	4 cut(s)	77, 315, 1086, 1300
BtsCI	GGATG	6 cut(s)	325, 367, 525, 709, 743, 1269
BtsIMutI	CAGTG	2 cut(s)	509, 591
BveI	ACCTGC	1 cut(s)	250
Cac8I	GCNNGC	2 cut(s)	367, 944
CaiI	CAGNNNCTG	2 cut(s)	242, 488
Cfr13I	GGNCC	6 cut(s)	557, 809, 1157, 1255, 1256, 1277
Cfr42I	CCGCGG	1 cut(s)	318
CseI	GACGC	1 cut(s)	216
CsiI	ACCWGGT	1 cut(s)	393
Csp6I	GTAC	6 cut(s)	34, 87, 277, 335, 564, 1213
CviAII	CATG	9 cut(s)	551, 561, 757, 790, 829, 1186, 1216, 1301, 1307
CviQI	GTAC	6 cut(s)	34, 87, 277, 335, 564, 1213
DdeI	CTNAG	8 cut(s)	39, 51, 569, 907, 977, 1110, 1137, 1179
DpnI	GATC	4 cut(s)	824, 975, 999, 1122
DpnII	GATC	4 cut(s)	822, 973, 997, 1120
DraI	TTTAAA	1 cut(s)	195
DraIII	CACNNNGTG	1 cut(s)	144
EaeI	YGGCCR	1 cut(s)	1038
EciI	GGCGGA	2 cut(s)	1269, 1278
Eco130I	CCWWGG	4 cut(s)	530, 774, 897, 1300
Eco147I	AGGCCT	2 cut(s)	857, 905
Eco24I	GRGCYC	2 cut(s)	1111, 1259
Eco32I	GATATC	1 cut(s)	216
Eco47I	GGWCC	3 cut(s)	557, 1157, 1277
Eco57I	CTGAAG	1 cut(s)	219
Eco88I	CYCGRG	1 cut(s)	545
EcoNI	CCTNNNNNAGG	1 cut(s)	1146
EcoO109I	RGGNCCY	1 cut(s)	1256
EcoRII	CCWGG	4 cut(s)	168, 393, 456, 1258
EcoRV	GATATC	1 cut(s)	216
EcoT14I	CCWWGG	4 cut(s)	530, 774, 897, 1300
EcoT22I	ATGCAT	1 cut(s)	1203
EcoT38I	GRGCYC	2 cut(s)	1111, 1259
ErhI	CCWWGG	4 cut(s)	530, 774, 897, 1300
FaeI	CATG	9 cut(s)	554, 564, 760, 793, 832, 1189, 1219, 1304, 1310
FalI	AAGNNNNNCTT	2 cut(s)	890, 922
FaqI	GGGAC	4 cut(s)	570, 644, 1074, 1170
FatI	CATG	9 cut(s)	550, 560, 756, 789, 828, 1185, 1215, 1300, 1306
FauI	CCCGC	2 cut(s)	442, 1097
FbaI	TGATCA	1 cut(s)	1120
Fnu4HI	GCNGC	3 cut(s)	315, 1041, 1283
FokI	GGATG	6 cut(s)	332, 374, 512, 716, 730, 1276
FriOI	GRGCYC	2 cut(s)	1111, 1259
Fsp4HI	GCNGC	3 cut(s)	315, 1041, 1283
FspBI	CTAG	2 cut(s)	531, 716
GluI	GCNGC	3 cut(s)	315, 1041, 1283
HaeIII	GGCC	5 cut(s)	811, 857, 905, 1040, 1257
HapII	CCGG	4 cut(s)	31, 722, 1169, 1224
HgaI	GACGC	1 cut(s)	216
Hin1II	CATG	9 cut(s)	554, 564, 760, 793, 832, 1189, 1219, 1304, 1310
HincII	GTYRAC	1 cut(s)	136
HindII	GTYRAC	1 cut(s)	136
HinfI	GANTC	4 cut(s)	453, 515, 522, 862
HpaII	CCGG	4 cut(s)	31, 722, 1169, 1224
HphI	GGTGA	4 cut(s)	611, 763, 1000, 1289
Hpy166II	GTNNAC	7 cut(s)	36, 87, 136, 268, 301, 421, 991
Hpy188I	TCNGA	6 cut(s)	238, 478, 882, 1002, 1080, 1197
Hpy188III	TCNNGA	5 cut(s)	519, 545, 571, 585, 872
Hpy8I	GTNNAC	7 cut(s)	36, 87, 136, 268, 301, 421, 991
HpyAV	CCTTC	4 cut(s)	347, 659, 905, 1152
HpyCH4IV	ACGT	1 cut(s)	780
HpyF3I	CTNAG	8 cut(s)	39, 51, 569, 907, 977, 1110, 1137, 1179
HpySE526I	ACGT	1 cut(s)	780
Hsp92II	CATG	9 cut(s)	554, 564, 760, 793, 832, 1189, 1219, 1304, 1310
Ksp22I	TGATCA	1 cut(s)	1120
KspI	CCGCGG	1 cut(s)	318
Kzo9I	GATC	4 cut(s)	822, 973, 997, 1120
LmnI	GCTCC	4 cut(s)	155, 664, 951, 1002
LweI	GCATC	6 cut(s)	352, 469, 752, 1122, 1188, 1257
MabI	ACCWGGT	1 cut(s)	393
MaeI	CTAG	2 cut(s)	531, 716
MaeII	ACGT	1 cut(s)	780
MaeIII	GTNAC	4 cut(s)	164, 343, 617, 769
MalI	GATC	4 cut(s)	824, 975, 999, 1122
MboI	GATC	4 cut(s)	822, 973, 997, 1120
MboII	GAAGA	3 cut(s)	225, 454, 1233
MfeI	CAATTG	2 cut(s)	348, 1032
MhlI	GDGCHC	4 cut(s)	423, 918, 1111, 1259
MluCI	AATT	8 cut(s)	98, 182, 348, 470, 608, 690, 1032, 1053
MmeI	TCCRAC	1 cut(s)	306
Mph1103I	ATGCAT	1 cut(s)	1203
MseI	TTAA	1 cut(s)	194
MslI	CAYNNNNRTG	3 cut(s)	986, 1080, 1305
MspA1I	CMGCKG	2 cut(s)	317, 1104
MspI	CCGG	4 cut(s)	31, 722, 1169, 1224
MspR9I	CCNGG	5 cut(s)	170, 395, 458, 1224, 1260
MunI	CAATTG	2 cut(s)	348, 1032
MvaI	CCWGG	4 cut(s)	170, 395, 458, 1260
MvnI	CGCG	1 cut(s)	317
NciI	CCSGG	1 cut(s)	1224
NcoI	CCATGG	1 cut(s)	1300
NdeII	GATC	4 cut(s)	822, 973, 997, 1120
NlaIII	CATG	9 cut(s)	554, 564, 760, 793, 832, 1189, 1219, 1304, 1310
NlaIV	GGNNCC	4 cut(s)	558, 1092, 1158, 1257
NmuCI	GTSAC	2 cut(s)	617, 769
NsiI	ATGCAT	1 cut(s)	1203
NspI	RCATGY	3 cut(s)	554, 760, 1219
PasI	CCCWGGG	1 cut(s)	1259
PceI	AGGCCT	2 cut(s)	857, 905
PfeI	GAWTC	4 cut(s)	453, 515, 522, 862
PkrI	GCNGC	3 cut(s)	316, 1042, 1284
Psp6I	CCWGG	4 cut(s)	168, 393, 456, 1258
PspGI	CCWGG	4 cut(s)	168, 393, 456, 1258
PspN4I	GGNNCC	4 cut(s)	558, 1092, 1158, 1257
PspOMI	GGGCCC	1 cut(s)	1255
PspPI	GGNCC	6 cut(s)	557, 809, 1157, 1255, 1256, 1277
PstI	CTGCAG	1 cut(s)	1150
PstNI	CAGNNNCTG	2 cut(s)	242, 488
RsaI	GTAC	6 cut(s)	35, 88, 278, 336, 565, 1214
RsaNI	GTAC	6 cut(s)	34, 87, 277, 335, 564, 1213
RseI	CAYNNNNRTG	3 cut(s)	986, 1080, 1305
SacII	CCGCGG	1 cut(s)	318
SaqAI	TTAA	1 cut(s)	194
SatI	GCNGC	3 cut(s)	315, 1041, 1283
Sau3AI	GATC	4 cut(s)	822, 973, 997, 1120
Sau96I	GGNCC	6 cut(s)	557, 809, 1157, 1255, 1256, 1277
ScaI	AGTACT	1 cut(s)	278
ScrFI	CCNGG	5 cut(s)	170, 395, 458, 1224, 1260
SduI	GDGCHC	4 cut(s)	423, 918, 1111, 1259
SexAI	ACCWGGT	1 cut(s)	393
SfaNI	GCATC	6 cut(s)	352, 469, 752, 1122, 1188, 1257
SfcI	CTRYAG	2 cut(s)	272, 1146
Sfr303I	CCGCGG	1 cut(s)	318
SgrBI	CCGCGG	1 cut(s)	318
SinI	GGWCC	3 cut(s)	557, 1157, 1277
SmiI	ATTTAAAT	1 cut(s)	195
SmiMI	CAYNNNNRTG	3 cut(s)	986, 1080, 1305
SmlI	CTYRAG	1 cut(s)	246
SmoI	CTYRAG	1 cut(s)	246
Sse9I	AATT	8 cut(s)	98, 182, 348, 470, 608, 690, 1032, 1053
SseBI	AGGCCT	2 cut(s)	857, 905
SsiI	CCGC	9 cut(s)	315, 317, 359, 449, 1041, 1104, 1280, 1283, 1289
SspMI	CTAG	2 cut(s)	531, 716
StuI	AGGCCT	2 cut(s)	857, 905
StyD4I	CCNGG	5 cut(s)	168, 393, 456, 1222, 1258
StyI	CCWWGG	4 cut(s)	530, 774, 897, 1300
SwaI	ATTTAAAT	1 cut(s)	195
TaiI	ACGT	1 cut(s)	783
TaqI	TCGA	1 cut(s)	750
TasI	AATT	8 cut(s)	98, 182, 348, 470, 608, 690, 1032, 1053
TatI	WGTACW	4 cut(s)	86, 276, 334, 563
TauI	GCSGC	3 cut(s)	317, 1043, 1285
TfiI	GAWTC	4 cut(s)	453, 515, 522, 862
Tru1I	TTAA	1 cut(s)	194
Tru9I	TTAA	1 cut(s)	194
TscAI	CASTG	2 cut(s)	516, 598
TseFI	GTSAC	2 cut(s)	617, 769
Tsp45I	GTSAC	2 cut(s)	617, 769
TspDTI	ATGAA	2 cut(s)	50, 1064
TspRI	CASTG	2 cut(s)	516, 598
VneI	GTGCAC	1 cut(s)	419
VpaK11BI	GGWCC	3 cut(s)	557, 1157, 1277
XagI	CCTNNNNNAGG	1 cut(s)	1146
XapI	RAATTY	2 cut(s)	182, 608
XceI	RCATGY	3 cut(s)	554, 760, 1219
XcmI	CCANNNNNNNNNTGG	2 cut(s)	508, 1033
XmaJI	CCTAGG	1 cut(s)	530
XspI	CTAG	2 cut(s)	531, 716
ZrmI	AGTACT	1 cut(s)	278
Zsp2I	ATGCAT	1 cut(s)	1203

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.