Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr00

Orthogroup ID

OG0007072

Physical Location & Seq

Genomic Coordinates Reverse (-)

5201286 .. 5205822

Gene Structure 4537 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD00G1031200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1053 bp

ATGAGGCTGAACGGCGAGCTTCCTCCGTGCTACGACGGAAGAGCGGAGGGGGAGGAGAATGGAGAAAATGAGAGAGAATTGAATTCAATCGGCAGCGTTGGGATTTCTCTGCCGCCAAAACTCGTCGTCGGGTACGCCTTGACCTCCAAGAAGAAGAAGAGCTTCTTGCAGCCCAAACTCGTTGTCTTGGCTAGGAATAAGGGGATCTTCTTCATTGCAATTGATGTAAACAAGCCACTTTCAGATCAAGGACCCTTTGATGTTGTTTTGCATAAGTTGTCGGGAAAAGAGTGGTCCGAGGTTATTGAGGATTACAGACAAAAACATCCAGAAGTAACTGTTCTTGATCCCCCAAATTCAGTAGAACATCTATACAACCGCCAGTCCATGCTTCAGGAAGTGGCTGATCTAAACTTGTCTGATTGCTATGGCAAGGTTGGTGTTCCAAAGCAGTTGATTGTCACTAAAGATCCATCATCTATTCCAAATGAAGTTGATAAAGCTGGGCTAAAATTGCCTCTGGTTGTCAAACCACTGGTTGTGGATGGTAGTGCCAAGTCACATGAACTATTTCTTGCTTACGACCAATGCTCCCTCTCAGAACTCGAACCTCCCTTGGTCCTGCAGGAGTTTGTAAATCACGGTGGTGTTCTCTTTAAAGTTTATATCGTTGGGGAAGCCATAAAGGTTGTAAGGCGTTTCTCTCTTCCCAATATCAGTAAACGTGAACTAGAAAAGCTTGCTGGTGTCTTCCGTTTCCCAAGGGTTTCATGTGCTGCGGCTTCAGCAGACGATGCAGACCTTGACCCTAGTGTTGCTGAACTTCCTCAACGGCCTTTGTTAGAGAACCTTGCAAGGGAGCTCCGCCAACGATTGGGCCTTCGGCTATTCAATGTTGATATGATTCGAGAGCATGGGACAAAGGATGTTTTTTATGTCATTGACATCAACTACTTTCCAGGTTACGGCAAAATGCCAGACTACGAGCACATATTTACAGATTTCCTACTAAGCCTTGTGCAGAGCCAGCATAAGAAAAGACTCGCTGCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006793 GO:0006796 GO:0006950 GO:0007275 GO:0008150 GO:0008152 GO:0009611 GO:0009791 GO:0009987 GO:0010154 GO:0010214 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0022414 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044464 GO:0047325 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051765 GO:0051766 GO:0052725 GO:0052726 GO:0061458

KEGG Pathways

Metabolic & Signaling

ko00562 ko01100 ko04070 map00562 map01100 map04070

Pfam Domains

Protein Families

Ins134_P3_kin

Protein Analysis

351

Amino Acids

39.2

Weight (kDa)

6.28

Isoelectric Point (pI)

35.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ins134_P3_kin_N	PF17927	42 - 120	4.5e-35	Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain
Ins134_P3_kin	PF05770	143 - 337	1.9e-92	Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007072)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33770
fragaria_vesca	FvH4_2g03090 FvH4_2g03090 FvH4_2g03090 FvH4_2g03090 FvH4_2g03090 FvH4_2g03090 FvH4_2g03090 FvH4_2g03090
malus_domestica	MD00G1031200.v1.1
prunus_persica	Prupe.8G151200_v2.0.a1 Prupe.8G151200_v2.0.a1
pyrus_communis	pycom10g09690
rosa_chinensis	RchiOBHm_Chr6g0247961
rosa_laevigata	RLG00000015167
rosa_multiflora	Rmu_ssc0000139.1_g000003
rosa_roxburghii	Rroxscaffold_179G00449320 Rroxscaffold_7G00213550
rosa_rugosa	Rorug05G0529800 Rorug05G0529800
rosa_samantha	Rh6AG044600 Rh6BG039600 Rh6CG038200 Rh6DG035200
rosa_wichuraiana	Rw6G003880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	874
AccBSI	CCGCTC	1 cut(s)	44
AciI	CCGC	5 cut(s)	44, 113, 379, 779, 865
AclWI	GGATC	3 cut(s)	212, 341, 464
AcsI	RAATTY	2 cut(s)	82, 355
AcuI	CTGAAG	2 cut(s)	377, 768
AfaI	GTAC	1 cut(s)	134
AfiI	CCNNNNNNNGG	3 cut(s)	856, 874, 965
AgsI	TTSAA	3 cut(s)	82, 87, 892
AjnI	CCWGG	1 cut(s)	958
AleI	CACNNNNGTG	1 cut(s)	645
AluBI	AGCT	5 cut(s)	19, 162, 503, 739, 862
AluI	AGCT	5 cut(s)	19, 162, 503, 739, 862
Alw21I	GWGCWC	2 cut(s)	864, 990
AlwI	GGATC	3 cut(s)	212, 341, 464
AoxI	GGCC	2 cut(s)	833, 877
ApeKI	GCWGC	4 cut(s)	93, 169, 776, 1046
ApoI	RAATTY	2 cut(s)	82, 355
ArsI	GACNNNNNNTTYG	2 cut(s)	168, 200
Asp700I	GAANNNNTTC	2 cut(s)	161, 570
AspS9I	GGNCC	4 cut(s)	251, 294, 619, 877
AvaII	GGWCC	3 cut(s)	251, 294, 619
BanII	GRGCYC	1 cut(s)	864
BbsI	GAAGAC	1 cut(s)	742
Bbv12I	GWGCWC	2 cut(s)	864, 990
BbvI	GCAGC	4 cut(s)	105, 181, 763, 1033
BccI	CCATC	2 cut(s)	481, 539
BceAI	ACGGC	3 cut(s)	28, 848, 982
BciT130I	CCWGG	1 cut(s)	960
BfaI	CTAG	3 cut(s)	192, 731, 810
BfmI	CTRYAG	1 cut(s)	623
BisI	GCNGC	6 cut(s)	94, 113, 170, 777, 780, 1047
BlsI	GCNGC	6 cut(s)	95, 114, 171, 778, 781, 1048
Bme1390I	CCNGG	1 cut(s)	960
Bme18I	GGWCC	3 cut(s)	251, 294, 619
BmgT120I	GGNCC	4 cut(s)	251, 294, 619, 877
BmiI	GGNNCC	1 cut(s)	253
BmrFI	CCNGG	1 cut(s)	960
BmsI	GCATC	1 cut(s)	784
BpiI	GAAGAC	1 cut(s)	742
BsaJI	CCNNGG	3 cut(s)	297, 615, 761
BsaXI	ACNNNNNCTCC	2 cut(s)	575, 605
Bsc4I	CCNNNNNNNGG	3 cut(s)	856, 874, 965
Bse1I	ACTGG	2 cut(s)	382, 540
Bse3DI	GCAATG	1 cut(s)	213
BseBI	CCWGG	1 cut(s)	960
BseDI	CCNNGG	3 cut(s)	297, 615, 761
BseGI	GGATG	3 cut(s)	325, 550, 931
BseLI	CCNNNNNNNGG	3 cut(s)	856, 874, 965
BseMI	GCAATG	1 cut(s)	213
BseMII	CTCAG	1 cut(s)	612
BseNI	ACTGG	2 cut(s)	382, 540
BseRI	GAGGAG	1 cut(s)	68
BseXI	GCAGC	4 cut(s)	105, 181, 763, 1033
BseYI	CCCAGC	1 cut(s)	503
BsgI	GTGCAG	1 cut(s)	1040
BshFI	GGCC	2 cut(s)	835, 879
BsiHKAI	GWGCWC	2 cut(s)	864, 990
BslFI	GGGAC	1 cut(s)	931
BslI	CCNNNNNNNGG	3 cut(s)	856, 874, 965
BsmFI	GGGAC	1 cut(s)	931
BsnI	GGCC	2 cut(s)	835, 879
Bsp1286I	GDGCHC	2 cut(s)	864, 990
Bsp143I	GATC	5 cut(s)	204, 244, 346, 406, 469
BspACI	CCGC	5 cut(s)	44, 113, 379, 779, 865
BspANI	GGCC	2 cut(s)	835, 879
BspCNI	CTCAG	1 cut(s)	611
BspLI	GGNNCC	1 cut(s)	253
BspMAI	CTGCAG	1 cut(s)	627
BspPI	GGATC	3 cut(s)	212, 341, 464
BspQI	GCTCTTC	2 cut(s)	34, 152
BsrBI	CCGCTC	1 cut(s)	44
BsrDI	GCAATG	1 cut(s)	213
BsrI	ACTGG	2 cut(s)	382, 540
BssECI	CCNNGG	3 cut(s)	297, 615, 761
BssMI	GATC	5 cut(s)	204, 244, 346, 406, 469
BssT1I	CCWWGG	2 cut(s)	615, 761
Bst2UI	CCWGG	1 cut(s)	960
Bst4CI	ACNGT	2 cut(s)	340, 644
Bst6I	CTCTTC	3 cut(s)	34, 152, 711
BstAPI	GCANNNNNTGC	1 cut(s)	794
BstC8I	GCNNGC	3 cut(s)	17, 741, 1028
BstDEI	CTNAG	2 cut(s)	598, 1010
BstF5I	GGATG	3 cut(s)	325, 550, 931
BstKTI	GATC	5 cut(s)	207, 247, 349, 409, 472
BstMBI	GATC	5 cut(s)	204, 244, 346, 406, 469
BstMWI	GCNNNNNNNGC	4 cut(s)	514, 785, 794, 1027
BstNI	CCWGG	1 cut(s)	960
BstSCI	CCNGG	1 cut(s)	958
BstSFI	CTRYAG	1 cut(s)	623
BstV1I	GCAGC	4 cut(s)	105, 181, 763, 1033
BstV2I	GAAGAC	1 cut(s)	742
BstX2I	RGATCY	2 cut(s)	204, 469
BstYI	RGATCY	2 cut(s)	204, 469
BsuRI	GGCC	2 cut(s)	835, 879
BtsCI	GGATG	3 cut(s)	325, 550, 931
BtsIMutI	CAGTG	1 cut(s)	533
Cac8I	GCNNGC	3 cut(s)	17, 741, 1028
Cfr13I	GGNCC	4 cut(s)	251, 294, 619, 877
Csp6I	GTAC	1 cut(s)	133
CviAII	CATG	4 cut(s)	388, 563, 771, 914
CviQI	GTAC	1 cut(s)	133
DdeI	CTNAG	2 cut(s)	598, 1010
DpnI	GATC	5 cut(s)	206, 246, 348, 408, 471
DpnII	GATC	5 cut(s)	204, 244, 346, 406, 469
DraI	TTTAAA	1 cut(s)	658
Eam1104I	CTCTTC	3 cut(s)	34, 152, 711
EarI	CTCTTC	3 cut(s)	34, 152, 711
EciI	GGCGGA	1 cut(s)	854
Ecl136II	GAGCTC	1 cut(s)	862
Eco130I	CCWWGG	2 cut(s)	615, 761
Eco24I	GRGCYC	1 cut(s)	864
Eco47I	GGWCC	3 cut(s)	251, 294, 619
Eco53kI	GAGCTC	1 cut(s)	862
Eco57I	CTGAAG	2 cut(s)	377, 768
EcoICRI	GAGCTC	1 cut(s)	862
EcoO109I	RGGNCCY	1 cut(s)	251
EcoRI	GAATTC	1 cut(s)	82
EcoRII	CCWGG	1 cut(s)	958
EcoT14I	CCWWGG	2 cut(s)	615, 761
EcoT38I	GRGCYC	1 cut(s)	864
ErhI	CCWWGG	2 cut(s)	615, 761
FaeI	CATG	4 cut(s)	391, 566, 774, 917
FalI	AAGNNNNNCTT	6 cut(s)	146, 178, 149, 181, 191, 223
FaqI	GGGAC	1 cut(s)	931
FatI	CATG	4 cut(s)	387, 562, 770, 913
Fnu4HI	GCNGC	6 cut(s)	94, 113, 170, 777, 780, 1047
FokI	GGATG	3 cut(s)	312, 557, 938
FriOI	GRGCYC	1 cut(s)	864
Fsp4HI	GCNGC	6 cut(s)	94, 113, 170, 777, 780, 1047
FspBI	CTAG	3 cut(s)	192, 731, 810
GluI	GCNGC	6 cut(s)	94, 113, 170, 777, 780, 1047
GsaI	CCCAGC	1 cut(s)	507
HaeIII	GGCC	2 cut(s)	835, 879
Hin1II	CATG	4 cut(s)	391, 566, 774, 917
HindIII	AAGCTT	1 cut(s)	737
HinfI	GANTC	2 cut(s)	904, 1041
Hpy166II	GTNNAC	3 cut(s)	229, 722, 728
Hpy188I	TCNGA	4 cut(s)	244, 298, 421, 601
Hpy188III	TCNNGA	5 cut(s)	282, 329, 344, 395, 908
Hpy8I	GTNNAC	3 cut(s)	229, 722, 728
Hpy99I	CGWCG	3 cut(s)	38, 128, 131
HpyAV	CCTTC	1 cut(s)	890
HpyCH4III	ACNGT	2 cut(s)	340, 644
HpyCH4IV	ACGT	1 cut(s)	724
HpyCH4V	TGCA	7 cut(s)	169, 218, 271, 625, 797, 854, 1021
HpyF10VI	GCNNNNNNNGC	4 cut(s)	514, 785, 794, 1027
HpyF3I	CTNAG	2 cut(s)	598, 1010
HpySE526I	ACGT	1 cut(s)	724
Hsp92II	CATG	4 cut(s)	391, 566, 774, 917
Kzo9I	GATC	5 cut(s)	204, 244, 346, 406, 469
LguI	GCTCTTC	2 cut(s)	34, 152
LmnI	GCTCC	3 cut(s)	596, 859, 867
Lsp1109I	GCAGC	4 cut(s)	105, 181, 763, 1033
LweI	GCATC	1 cut(s)	784
MaeI	CTAG	3 cut(s)	192, 731, 810
MaeII	ACGT	1 cut(s)	724
MaeIII	GTNAC	4 cut(s)	334, 460, 558, 962
MalI	GATC	5 cut(s)	206, 246, 348, 408, 471
MbiI	CCGCTC	1 cut(s)	44
MboI	GATC	5 cut(s)	204, 244, 346, 406, 469
MboII	GAAGA	8 cut(s)	51, 163, 166, 169, 199, 202, 698, 742
MfeI	CAATTG	1 cut(s)	219
MflI	RGATCY	2 cut(s)	204, 469
MhlI	GDGCHC	2 cut(s)	864, 990
MluCI	AATT	5 cut(s)	77, 82, 219, 355, 512
MlyI	GAGTC	1 cut(s)	1035
MroXI	GAANNNNTTC	2 cut(s)	161, 570
MseI	TTAA	1 cut(s)	657
MslI	CAYNNNNRTG	1 cut(s)	645
MspR9I	CCNGG	1 cut(s)	960
MunI	CAATTG	1 cut(s)	219
MvaI	CCWGG	1 cut(s)	960
MwoI	GCNNNNNNNGC	4 cut(s)	514, 785, 794, 1027
NdeII	GATC	5 cut(s)	204, 244, 346, 406, 469
NlaIII	CATG	4 cut(s)	391, 566, 774, 917
NlaIV	GGNNCC	1 cut(s)	253
NmuCI	GTSAC	2 cut(s)	460, 558
OliI	CACNNNNGTG	1 cut(s)	645
PciSI	GCTCTTC	2 cut(s)	34, 152
PdmI	GAANNNNTTC	2 cut(s)	161, 570
PfeI	GAWTC	1 cut(s)	904
PflMI	CCANNNNNTGG	1 cut(s)	874
PkrI	GCNGC	6 cut(s)	95, 114, 171, 778, 781, 1048
PleI	GAGTC	1 cut(s)	1035
PpsI	GAGTC	1 cut(s)	1035
PpuMI	RGGWCCY	1 cut(s)	251
Psp124BI	GAGCTC	1 cut(s)	864
Psp5II	RGGWCCY	1 cut(s)	251
Psp6I	CCWGG	1 cut(s)	958
PspFI	CCCAGC	1 cut(s)	503
PspGI	CCWGG	1 cut(s)	958
PspN4I	GGNNCC	1 cut(s)	253
PspPI	GGNCC	4 cut(s)	251, 294, 619, 877
PspPPI	RGGWCCY	1 cut(s)	251
PstI	CTGCAG	1 cut(s)	627
PsuI	RGATCY	2 cut(s)	204, 469
RsaI	GTAC	1 cut(s)	134
RsaNI	GTAC	1 cut(s)	133
RseI	CAYNNNNRTG	1 cut(s)	645
SacI	GAGCTC	1 cut(s)	864
SapI	GCTCTTC	2 cut(s)	34, 152
SaqAI	TTAA	1 cut(s)	657
SatI	GCNGC	6 cut(s)	94, 113, 170, 777, 780, 1047
Sau3AI	GATC	5 cut(s)	204, 244, 346, 406, 469
Sau96I	GGNCC	4 cut(s)	251, 294, 619, 877
SbfI	CCTGCAGG	1 cut(s)	627
SchI	GAGTC	1 cut(s)	1035
ScrFI	CCNGG	1 cut(s)	960
SdaI	CCTGCAGG	1 cut(s)	627
SduI	GDGCHC	2 cut(s)	864, 990
SfaNI	GCATC	1 cut(s)	784
SfcI	CTRYAG	1 cut(s)	623
SinI	GGWCC	3 cut(s)	251, 294, 619
SmiMI	CAYNNNNRTG	1 cut(s)	645
Sse8387I	CCTGCAGG	1 cut(s)	627
Sse9I	AATT	5 cut(s)	77, 82, 219, 355, 512
SsiI	CCGC	5 cut(s)	44, 113, 379, 779, 865
SspMI	CTAG	3 cut(s)	192, 731, 810
SstI	GAGCTC	1 cut(s)	864
StyD4I	CCNGG	1 cut(s)	958
StyI	CCWWGG	2 cut(s)	615, 761
TaaI	ACNGT	2 cut(s)	340, 644
TaiI	ACGT	1 cut(s)	727
TaqI	TCGA	2 cut(s)	606, 907
TasI	AATT	5 cut(s)	77, 82, 219, 355, 512
TauI	GCSGC	2 cut(s)	115, 782
TfiI	GAWTC	1 cut(s)	904
Tru1I	TTAA	1 cut(s)	657
Tru9I	TTAA	1 cut(s)	657
TscAI	CASTG	1 cut(s)	540
TseFI	GTSAC	2 cut(s)	460, 558
TseI	GCWGC	4 cut(s)	93, 169, 776, 1046
Tsp45I	GTSAC	2 cut(s)	460, 558
TspDTI	ATGAA	4 cut(s)	202, 504, 579, 759
TspGWI	ACGGA	3 cut(s)	15, 51, 743
TspRI	CASTG	1 cut(s)	540
Van91I	CCANNNNNTGG	1 cut(s)	874
VpaK11BI	GGWCC	3 cut(s)	251, 294, 619
XapI	RAATTY	2 cut(s)	82, 355
XmnI	GAANNNNTTC	2 cut(s)	161, 570
XspI	CTAG	3 cut(s)	192, 731, 810

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.