Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr00

Orthogroup ID

OG0012342

Physical Location & Seq

Genomic Coordinates Reverse (-)

19936731 .. 19938588

Gene Structure 1858 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD00G1095800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1503 bp

ATGGATCCGAAGCTCTTTGCCAAAACCCTAATCCGAAATGCGATAGCGAGCAGGTCCTACTACACGAGCAGGACCAAGAAGCCGACCCTATACAACAAAATCAGTCCGCTCGGAAACCCTAGCCTGAACGTGGTTCCGGAGCTCGACGACTGGGTCTTCAATGGCAACAAGGTCCGAGTCGCGGAGCTTCAGCGCATCATTCACGACCTCCGCAAGCGGAAACGCTTCTCACAAGCCCTCCAGATTTCGGAGTGGATGAAACAGAAGGGGATTTGCATATTTTCGCCGGTTGAGCATGCCGTGCAGCTGGATTTGATTGGGAAGGTGCGCGGGTTTGTTTCCGTGGAAGAATATTTCGATGATTTGAGGGAGGAAGATAAGAACTTCAAGACGTATGGTGCTCTTCTGAATTGCTATGTCCGGCAGCGCCAAGTGGATAAGTCCCTCGCTCATTTGCAAAAAATGAAGGAGATGGGATTTGTTTCTTCGCCTCTAACTTACAACGACATCATGTGTTTGTATACGAATGTTGGCCAGCATGAGAAGGTCCCGGGCGTTCTAGCTGAGATGAAGGAGAACAATGTCCCTCCCGACAACTTCAGCTATAGAATCTGCATCAATTCGTATGGTGTGAGGTCTGATCTTGAAGGAATGGAGAAGGTTTTTAAAGAGATGGAAAGCCAGCCTCACTTCGTCGTGGACTGGAACACATATGCTGTCGTTGCCAATTTCTATATAAAAGAAGGCCAAACCGACAAGGCAATGGATGCTTTAAAGAAGTCGGAAGAGAGGCTGGAAAGCAAAGACGGACTTGGCTACAATCATCTGATTTCGCTCTATGCGAGTATGGGGAATAAGGGTGAAGTTTTGAGATTATGGGGTGTTGAGAAGAGTGCTTGTAAGAGATGCATAAACAGGGATTATATGGGCATGTTGGTATCTCTGGTGAGGCTCGGTGAGCTCGATGAAGCTGAGAAGGTGATGGAGGAGTGGGAATTGTCCGGAAACTGTTACGATTTTCGGGTGCCACAAACTCTCATTATAGGCTACACGGTAAAGGGATTATATGAGAGAGCAGAAGCTCTGCTTGAAGACTTGATGGAGAAGGGAAAAACAACCACCGCGAGAAGTTGGGAAATAGTGGCTGCTGGGTATGCAAATAGGGGTGAGACGGAGAAGGTTTTCGAGTGCATGAAGGCGGCTCTCTGTCTGTCTTCCGAGAAACGGTGGAAACCTAACCTTGGAGTTGTGACAACCGTATTGAGTTGGCTTGGTGATGAAGGCAGTGCCGAAGATACGGAAGCTTTTGTTGGGGCGTTGAGGAATGTCATCCTGGTGAACAAGCACATGTATCGTGCGTTGTTAAAGGCATATGTAAGAGAGGGTAAAGAAGTAAGTAGTGTTACGGATCGTATGGAAGCTGATGAAATTGATGTTGATGACGAAGAAGCAGAGGACATCTTTGCCACTAAAGAAAACAAAGAACACATATCCGCAGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

501

Amino Acids

57.13

Weight (kDa)

5.66

Isoelectric Point (pI)

37.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	166 - 209	6e-09	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012342)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21705
fragaria_vesca	FvH4_3g09350
malus_domestica	MD00G1095800.v1.1 MD05G1313800.v1.1
prunus_persica	Prupe.4G045900_v2.0.a1
pyrus_communis	pycom05g29160 pycom10g24750
rosa_chinensis	RchiOBHm_Chr5g0008241
rosa_laevigata	RLG00000031552
rosa_multiflora	Rmu_co8293593.1_g000001 Rmu_sc0001387.1_g000002 Rmu_sc0001626.1_g000024
rosa_roxburghii	Rroxscaffold_1G00068250
rosa_rugosa	Rorug04G0434700
rosa_samantha	Rh5AG063000 Rh5BG059200 Rh5CG069900 Rh5DG058800
rosa_wichuraiana	Rw5G005800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	152
Acc36I	ACCTGC	1 cut(s)	42
AccB1I	GGYRCC	1 cut(s)	1024
AccBSI	CCGCTC	1 cut(s)	109
AccI	GTMKAC	1 cut(s)	521
AccII	CGCG	3 cut(s)	182, 330, 1124
AccIII	TCCGGA	2 cut(s)	136, 1001
AciI	CCGC	8 cut(s)	107, 182, 211, 217, 330, 1122, 1199, 1494
AclWI	GGATC	2 cut(s)	12, 1416
AcoI	YGGCCR	1 cut(s)	532
AcuI	CTGAAG	2 cut(s)	173, 583
AfiI	CCNNNNNNNGG	5 cut(s)	130, 181, 247, 1224, 1241
AflIII	ACRYGT	1 cut(s)	1347
AgsI	TTSAA	4 cut(s)	160, 388, 647, 1091
AjnI	CCWGG	1 cut(s)	1332
AjuI	GAANNNNNNNTTGG	2 cut(s)	1293, 1325
Alw21I	GWGCWC	3 cut(s)	144, 403, 963
Alw26I	GTCTC	1 cut(s)	1163
AlwI	GGATC	2 cut(s)	12, 1416
Ama87I	CYCGRG	1 cut(s)	550
Aor13HI	TCCGGA	2 cut(s)	136, 1001
AoxI	GGCC	2 cut(s)	532, 745
ApeKI	GCWGC	3 cut(s)	304, 424, 1145
Asp700I	GAANNNNTTC	2 cut(s)	224, 1181
AspLEI	GCGC	3 cut(s)	195, 330, 429
AspS9I	GGNCC	4 cut(s)	54, 72, 172, 547
AsuC2I	CCSGG	2 cut(s)	551, 552
AsuHPI	GGTGA	7 cut(s)	872, 958, 968, 991, 1178, 1286, 1348
AvaI	CYCGRG	1 cut(s)	550
AvaII	GGWCC	4 cut(s)	54, 72, 172, 547
BalI	TGGCCA	1 cut(s)	534
BamHI	GGATCC	1 cut(s)	4
BanI	GGYRCC	1 cut(s)	1024
BanII	GRGCYC	2 cut(s)	144, 963
BauI	CACGAG	1 cut(s)	64
BbsI	GAAGAC	3 cut(s)	148, 1098, 1206
Bbv12I	GWGCWC	3 cut(s)	144, 403, 963
BbvI	GCAGC	3 cut(s)	316, 436, 1132
BccI	CCATC	4 cut(s)	466, 667, 976, 1093
BceAI	ACGGC	1 cut(s)	284
BcgI	CGANNNNNNTGC	2 cut(s)	1334, 1368
BciT130I	CCWGG	1 cut(s)	1334
BcnI	CCSGG	2 cut(s)	551, 552
BcoDI	GTCTC	1 cut(s)	1163
BfaI	CTAG	2 cut(s)	120, 560
BfmI	CTRYAG	1 cut(s)	604
BfoI	RGCGCY	1 cut(s)	430
BfuAI	ACCTGC	1 cut(s)	42
BisI	GCNGC	4 cut(s)	305, 425, 1146, 1200
BlsI	GCNGC	4 cut(s)	306, 426, 1147, 1201
Bme1390I	CCNGG	3 cut(s)	551, 552, 1334
Bme18I	GGWCC	4 cut(s)	54, 72, 172, 547
BmeT110I	CYCGRG	1 cut(s)	550
BmgT120I	GGNCC	4 cut(s)	54, 72, 172, 547
BmiI	GGNNCC	4 cut(s)	6, 135, 549, 1026
BmrFI	CCNGG	3 cut(s)	551, 552, 1334
BmrI	ACTGGG	1 cut(s)	160
BmsI	GCATC	4 cut(s)	204, 624, 757, 896
BmuI	ACTGGG	1 cut(s)	160
BpiI	GAAGAC	3 cut(s)	148, 1098, 1206
BpmI	CTGGAG	1 cut(s)	224
BpuMI	CCSGG	2 cut(s)	551, 552
BsaJI	CCNNGG	3 cut(s)	342, 550, 1240
BsaWI	WCCGGW	2 cut(s)	136, 1001
BsaXI	ACNNNNNCTCC	2 cut(s)	222, 252
Bsc4I	CCNNNNNNNGG	5 cut(s)	130, 181, 247, 1224, 1241
Bse118I	RCCGGY	1 cut(s)	286
Bse1I	ACTGG	2 cut(s)	155, 707
Bse3DI	GCAATG	1 cut(s)	768
BseAI	TCCGGA	2 cut(s)	136, 1001
BseBI	CCWGG	1 cut(s)	1334
BseDI	CCNNGG	3 cut(s)	342, 550, 1240
BseGI	GGATG	3 cut(s)	261, 772, 1329
BseLI	CCNNNNNNNGG	5 cut(s)	130, 181, 247, 1224, 1241
BseMI	GCAATG	1 cut(s)	768
BseMII	CTCAG	2 cut(s)	555, 963
BseNI	ACTGG	2 cut(s)	155, 707
BseRI	GAGGAG	1 cut(s)	1001
BseXI	GCAGC	3 cut(s)	316, 436, 1132
BseYI	CCCAGC	1 cut(s)	1148
BsgI	GTGCAG	1 cut(s)	323
Bsh1236I	CGCG	3 cut(s)	182, 330, 1124
BshFI	GGCC	2 cut(s)	534, 747
BshNI	GGYRCC	1 cut(s)	1024
BsiHKAI	GWGCWC	3 cut(s)	144, 403, 963
BsiHKCI	CYCGRG	1 cut(s)	550
BsiSI	CCGG	5 cut(s)	137, 287, 421, 551, 1002
BslFI	GGGAC	3 cut(s)	427, 533, 569
BslI	CCNNNNNNNGG	5 cut(s)	130, 181, 247, 1224, 1241
BsmAI	GTCTC	1 cut(s)	1163
BsmBI	CGTCTC	1 cut(s)	1163
BsmFI	GGGAC	3 cut(s)	427, 533, 569
BsnI	GGCC	2 cut(s)	534, 747
BsoBI	CYCGRG	1 cut(s)	550
Bsp1286I	GDGCHC	3 cut(s)	144, 403, 963
Bsp13I	TCCGGA	2 cut(s)	136, 1001
Bsp143I	GATC	3 cut(s)	4, 640, 1408
BspACI	CCGC	8 cut(s)	107, 182, 211, 217, 330, 1122, 1199, 1494
BspANI	GGCC	2 cut(s)	534, 747
BspCNI	CTCAG	2 cut(s)	556, 964
BspEI	TCCGGA	2 cut(s)	136, 1001
BspFNI	CGCG	3 cut(s)	182, 330, 1124
BspLI	GGNNCC	4 cut(s)	6, 135, 549, 1026
BspMI	ACCTGC	1 cut(s)	42
BspPI	GGATC	2 cut(s)	12, 1416
BspQI	GCTCTTC	1 cut(s)	408
BspT107I	GGYRCC	1 cut(s)	1024
BsrBI	CCGCTC	1 cut(s)	109
BsrDI	GCAATG	1 cut(s)	768
BsrFI	RCCGGY	1 cut(s)	286
BsrI	ACTGG	2 cut(s)	155, 707
BssAI	RCCGGY	1 cut(s)	286
BssECI	CCNNGG	3 cut(s)	342, 550, 1240
BssMI	GATC	3 cut(s)	4, 640, 1408
BssNAI	GTATAC	1 cut(s)	522
BssSI	CACGAG	1 cut(s)	64
BssT1I	CCWWGG	1 cut(s)	1240
Bst1107I	GTATAC	1 cut(s)	522
Bst2BI	CACGAG	1 cut(s)	64
Bst2UI	CCWGG	1 cut(s)	1334
Bst4CI	ACNGT	4 cut(s)	1010, 1054, 1227, 1258
Bst6I	CTCTTC	3 cut(s)	408, 780, 884
BstAPI	GCANNNNNTGC	2 cut(s)	301, 767
BstC8I	GCNNGC	5 cut(s)	49, 215, 297, 536, 683
BstDEI	CTNAG	2 cut(s)	564, 972
BstDSI	CCRYGG	1 cut(s)	342
BstF5I	GGATG	3 cut(s)	261, 772, 1329
BstFNI	CGCG	3 cut(s)	182, 330, 1124
BstH2I	RGCGCY	1 cut(s)	430
BstHHI	GCGC	3 cut(s)	195, 330, 429
BstKTI	GATC	3 cut(s)	7, 643, 1411
BstMAI	GTCTC	1 cut(s)	1163
BstMBI	GATC	3 cut(s)	4, 640, 1408
BstMWI	GCNNNNNNNGC	6 cut(s)	292, 301, 722, 767, 958, 1154
BstNI	CCWGG	1 cut(s)	1334
BstNSI	RCATGY	3 cut(s)	299, 934, 1351
BstSCI	CCNGG	3 cut(s)	549, 550, 1332
BstSFI	CTRYAG	1 cut(s)	604
BstUI	CGCG	3 cut(s)	182, 330, 1124
BstV1I	GCAGC	3 cut(s)	316, 436, 1132
BstV2I	GAAGAC	3 cut(s)	148, 1098, 1206
BstX2I	RGATCY	1 cut(s)	4
BstYI	RGATCY	1 cut(s)	4
BstZ17I	GTATAC	1 cut(s)	522
BsuRI	GGCC	2 cut(s)	534, 747
BtgI	CCRYGG	1 cut(s)	342
BtsCI	GGATG	3 cut(s)	261, 772, 1329
BtsI	GCAGTG	1 cut(s)	1291
BtsIMutI	CAGTG	1 cut(s)	1291
BveI	ACCTGC	1 cut(s)	42
Cac8I	GCNNGC	5 cut(s)	49, 215, 297, 536, 683
CfoI	GCGC	3 cut(s)	195, 330, 429
Cfr10I	RCCGGY	1 cut(s)	286
Cfr13I	GGNCC	4 cut(s)	54, 72, 172, 547
Cfr9I	CCCGGG	1 cut(s)	550
CviAII	CATG	6 cut(s)	296, 511, 539, 931, 1192, 1348
DdeI	CTNAG	2 cut(s)	564, 972
DpnI	GATC	3 cut(s)	6, 642, 1410
DpnII	GATC	3 cut(s)	4, 640, 1408
DraI	TTTAAA	2 cut(s)	667, 774
DrdI	GACNNNNNNGTC	1 cut(s)	152
DseDI	GACNNNNNNGTC	1 cut(s)	152
EaeI	YGGCCR	1 cut(s)	532
Eam1104I	CTCTTC	3 cut(s)	408, 780, 884
EarI	CTCTTC	3 cut(s)	408, 780, 884
Ecl136II	GAGCTC	2 cut(s)	142, 961
Eco130I	CCWWGG	1 cut(s)	1240
Eco24I	GRGCYC	2 cut(s)	144, 963
Eco47I	GGWCC	4 cut(s)	54, 72, 172, 547
Eco53kI	GAGCTC	2 cut(s)	142, 961
Eco57I	CTGAAG	2 cut(s)	173, 583
Eco88I	CYCGRG	1 cut(s)	550
EcoICRI	GAGCTC	2 cut(s)	142, 961
EcoO109I	RGGNCCY	2 cut(s)	54, 547
EcoRII	CCWGG	1 cut(s)	1332
EcoT14I	CCWWGG	1 cut(s)	1240
EcoT22I	ATGCAT	1 cut(s)	911
EcoT38I	GRGCYC	2 cut(s)	144, 963
ErhI	CCWWGG	1 cut(s)	1240
Esp3I	CGTCTC	1 cut(s)	1163
FaeI	CATG	6 cut(s)	299, 514, 542, 934, 1195, 1351
FalI	AAGNNNNNCTT	4 cut(s)	795, 827, 1071, 1103
FaqI	GGGAC	3 cut(s)	427, 533, 569
FatI	CATG	6 cut(s)	295, 510, 538, 930, 1191, 1347
FauI	CCCGC	1 cut(s)	323
FauNDI	CATATG	2 cut(s)	712, 1372
FblI	GTMKAC	1 cut(s)	521
Fnu4HI	GCNGC	4 cut(s)	305, 425, 1146, 1200
FokI	GGATG	3 cut(s)	268, 779, 1316
FriOI	GRGCYC	2 cut(s)	144, 963
Fsp4HI	GCNGC	4 cut(s)	305, 425, 1146, 1200
FspBI	CTAG	2 cut(s)	120, 560
GlaI	GCGC	3 cut(s)	194, 329, 428
GluI	GCNGC	4 cut(s)	305, 425, 1146, 1200
GsaI	CCCAGC	1 cut(s)	1152
GsuI	CTGGAG	1 cut(s)	224
HaeII	RGCGCY	1 cut(s)	430
HaeIII	GGCC	2 cut(s)	534, 747
HapII	CCGG	5 cut(s)	137, 287, 421, 551, 1002
HhaI	GCGC	3 cut(s)	195, 330, 429
Hin1II	CATG	6 cut(s)	299, 514, 542, 934, 1195, 1351
Hin6I	GCGC	3 cut(s)	193, 328, 427
HinP1I	GCGC	3 cut(s)	193, 328, 427
HindIII	AAGCTT	1 cut(s)	1302
HinfI	GANTC	2 cut(s)	177, 609
HpaII	CCGG	5 cut(s)	137, 287, 421, 551, 1002
HphI	GGTGA	7 cut(s)	872, 958, 968, 991, 1178, 1286, 1348
Hpy166II	GTNNAC	3 cut(s)	522, 700, 1339
Hpy188III	TCNNGA	7 cut(s)	137, 203, 241, 388, 590, 644, 1002
Hpy8I	GTNNAC	3 cut(s)	522, 700, 1339
Hpy99I	CGWCG	2 cut(s)	149, 698
HpyCH4III	ACNGT	4 cut(s)	1010, 1054, 1227, 1258
HpyCH4IV	ACGT	2 cut(s)	129, 392
HpyCH4V	TGCA	7 cut(s)	276, 304, 457, 615, 909, 1157, 1191
HpyF10VI	GCNNNNNNNGC	6 cut(s)	292, 301, 722, 767, 958, 1154
HpyF3I	CTNAG	2 cut(s)	564, 972
HpySE526I	ACGT	2 cut(s)	129, 392
Hsp92II	CATG	6 cut(s)	299, 514, 542, 934, 1195, 1351
HspAI	GCGC	3 cut(s)	193, 328, 427
Kpn2I	TCCGGA	2 cut(s)	136, 1001
Kzo9I	GATC	3 cut(s)	4, 640, 1408
LguI	GCTCTTC	1 cut(s)	408
LmnI	GCTCC	2 cut(s)	139, 184
Lsp1109I	GCAGC	3 cut(s)	316, 436, 1132
LweI	GCATC	4 cut(s)	204, 624, 757, 896
MaeI	CTAG	2 cut(s)	120, 560
MaeII	ACGT	2 cut(s)	129, 392
MaeIII	GTNAC	3 cut(s)	1010, 1249, 1402
MalI	GATC	3 cut(s)	6, 642, 1410
MbiI	CCGCTC	1 cut(s)	109
MboI	GATC	3 cut(s)	4, 640, 1408
MflI	RGATCY	1 cut(s)	4
MhlI	GDGCHC	3 cut(s)	144, 403, 963
MlsI	TGGCCA	1 cut(s)	534
MluCI	AATT	5 cut(s)	409, 619, 727, 995, 1428
MluNI	TGGCCA	1 cut(s)	534
MlyI	GAGTC	1 cut(s)	186
MmeI	TCCRAC	1 cut(s)	762
Mox20I	TGGCCA	1 cut(s)	534
Mph1103I	ATGCAT	1 cut(s)	911
MroI	TCCGGA	2 cut(s)	136, 1001
MroXI	GAANNNNTTC	2 cut(s)	224, 1181
MscI	TGGCCA	1 cut(s)	534
MseI	TTAA	3 cut(s)	666, 773, 1364
MslI	CAYNNNNRTG	1 cut(s)	1334
Msp20I	TGGCCA	1 cut(s)	534
MspA1I	CMGCKG	1 cut(s)	307
MspI	CCGG	5 cut(s)	137, 287, 421, 551, 1002
MspR9I	CCNGG	3 cut(s)	551, 552, 1334
MvaI	CCWGG	1 cut(s)	1334
MvnI	CGCG	3 cut(s)	182, 330, 1124
MwoI	GCNNNNNNNGC	6 cut(s)	292, 301, 722, 767, 958, 1154
NciI	CCSGG	2 cut(s)	551, 552
NdeI	CATATG	2 cut(s)	712, 1372
NdeII	GATC	3 cut(s)	4, 640, 1408
NlaIII	CATG	6 cut(s)	299, 514, 542, 934, 1195, 1351
NlaIV	GGNNCC	4 cut(s)	6, 135, 549, 1026
NmuCI	GTSAC	1 cut(s)	1249
NsiI	ATGCAT	1 cut(s)	911
NspI	RCATGY	3 cut(s)	299, 934, 1351
PaeI	GCATGC	1 cut(s)	299
PciI	ACATGT	1 cut(s)	1347
PciSI	GCTCTTC	1 cut(s)	408
PcsI	WCGNNNNNNNCGW	2 cut(s)	839, 960
PdmI	GAANNNNTTC	2 cut(s)	224, 1181
PfeI	GAWTC	1 cut(s)	609
PflFI	GACNNNGTC	1 cut(s)	152
PkrI	GCNGC	4 cut(s)	306, 426, 1147, 1201
PleI	GAGTC	1 cut(s)	185
PpsI	GAGTC	1 cut(s)	185
PpuMI	RGGWCCY	2 cut(s)	54, 547
PscI	ACATGT	1 cut(s)	1347
Psp124BI	GAGCTC	2 cut(s)	144, 963
Psp5II	RGGWCCY	2 cut(s)	54, 547
Psp6I	CCWGG	1 cut(s)	1332
PspFI	CCCAGC	1 cut(s)	1148
PspGI	CCWGG	1 cut(s)	1332
PspN4I	GGNNCC	4 cut(s)	6, 135, 549, 1026
PspPI	GGNCC	4 cut(s)	54, 72, 172, 547
PspPPI	RGGWCCY	2 cut(s)	54, 547
PsuI	RGATCY	1 cut(s)	4
PsyI	GACNNNGTC	1 cut(s)	152
PvuII	CAGCTG	1 cut(s)	307
RseI	CAYNNNNRTG	1 cut(s)	1334
SacI	GAGCTC	2 cut(s)	144, 963
SapI	GCTCTTC	1 cut(s)	408
SaqAI	TTAA	3 cut(s)	666, 773, 1364
SatI	GCNGC	4 cut(s)	305, 425, 1146, 1200
Sau3AI	GATC	3 cut(s)	4, 640, 1408
Sau96I	GGNCC	4 cut(s)	54, 72, 172, 547
SchI	GAGTC	1 cut(s)	186
ScrFI	CCNGG	3 cut(s)	551, 552, 1334
SduI	GDGCHC	3 cut(s)	144, 403, 963
SfaNI	GCATC	4 cut(s)	204, 624, 757, 896
SfcI	CTRYAG	1 cut(s)	604
SinI	GGWCC	4 cut(s)	54, 72, 172, 547
SmaI	CCCGGG	1 cut(s)	552
SmiMI	CAYNNNNRTG	1 cut(s)	1334
SphI	GCATGC	1 cut(s)	299
Sse9I	AATT	5 cut(s)	409, 619, 727, 995, 1428
SsiI	CCGC	8 cut(s)	107, 182, 211, 217, 330, 1122, 1199, 1494
SspI	AATATT	1 cut(s)	353
SspMI	CTAG	2 cut(s)	120, 560
SstI	GAGCTC	2 cut(s)	144, 963
StyD4I	CCNGG	3 cut(s)	549, 550, 1332
StyI	CCWWGG	1 cut(s)	1240
TaaI	ACNGT	4 cut(s)	1010, 1054, 1227, 1258
TaiI	ACGT	2 cut(s)	132, 395
TaqI	TCGA	4 cut(s)	144, 357, 963, 1185
TasI	AATT	5 cut(s)	409, 619, 727, 995, 1428
TauI	GCSGC	1 cut(s)	1202
TfiI	GAWTC	1 cut(s)	609
Tru1I	TTAA	3 cut(s)	666, 773, 1364
Tru9I	TTAA	3 cut(s)	666, 773, 1364
TscAI	CASTG	1 cut(s)	1291
TseFI	GTSAC	1 cut(s)	1249
TseI	GCWGC	3 cut(s)	304, 424, 1145
Tsp45I	GTSAC	1 cut(s)	1249
TspDTI	ATGAA	7 cut(s)	272, 479, 584, 981, 1208, 1293, 1440
TspGWI	ACGGA	5 cut(s)	331, 822, 1187, 1313, 1421
TspMI	CCCGGG	1 cut(s)	550
TspRI	CASTG	1 cut(s)	1291
Tth111I	GACNNNGTC	1 cut(s)	152
VpaK11BI	GGWCC	4 cut(s)	54, 72, 172, 547
XceI	RCATGY	3 cut(s)	299, 934, 1351
XmaI	CCCGGG	1 cut(s)	550
XmiI	GTMKAC	1 cut(s)	521
XmnI	GAANNNNTTC	2 cut(s)	224, 1181
XspI	CTAG	2 cut(s)	120, 560
Zsp2I	ATGCAT	1 cut(s)	911

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.