Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001387.1

Orthogroup ID

OG0012342

Physical Location & Seq

Genomic Coordinates Reverse (-)

2153 .. 3888

Gene Structure 1736 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001387.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1482 bp

atggatcccaagctctcctccgtcaaaaccctcatccgaaacgcgattacgagcaggtcctactatacgagccggaccaagaagcctaccctctacacgaaaatcagtcctctcggaaatccgaaccaaagcgtggttccggagctcgacgactgggtctccaaaggcaacaaggtcagcgtcggcgagctccaacgcatcattcgcgaccttcgcaagcgcaagcgcttctctcaagccctacagatttctgagtggatgaatgagaagggggtatgcaagtttcggccgagtgagcatgccgtgcagctggatttgataggaagggttcgggggtttgtttcggcagaagagtatttcagtaatttgggggatggagataaggactgtaggacatatggtgctcttttgaattgctatgtccggcagctccagacggagaagtcccttggtcatttgcgcaaaatgcaggagatggggtttgcttcttcgcctcttgattacaatgggatcatgtgtttgtatacaaatggcggtcagcatgagaaggtccctggtgtgctggctgagatgaaggagaataatgtatctcctgacaacttcagctatagaatctgcatcaactcttatggggtgaggtctgatcttgaaggagtcgaaaaggttttgaaagagatggagggacagccttacattgtcatggactggaatacttatgctgttgttgctgatttctatataaaggcaggccaaaccaacaaggcgattgatgccttaaagaagtcggaagagaggttggatacggaaaaagggcttggctacaactttttgatttccctctatgcgaatatggggagtaaggatgaagttttgaggttatggggtcttgagaagagtgcttgtaagagatgcataaacagggactatatatgcatgttggtgtctctggtgaggcttggtgagtttgaagaagctgagatggttttgaaggaatgggaaatgtctggaaactgttatgattttcgagtgccacagactgtggtagtagggtattcagcaaaggggttgtatgagagagcagaagctctgcttgaagacttgatggagaagggaaaagcaaccacccttaaaagttgggaaatagtagctgctggatatgtcgctaacggtgagatggaaaaagctttaaagtgcatggaggttgcgctcagtgtgtggacagaggaaggacggaaacccaacaatagtttgatcacaaccttactgagttggcttggtgatgaatgcagtgttgaagatgcggaagtttttgttggatcattgaggaaggttatcccagtgaacaagcagatgtatcatgcattgttgaaggcatatgtaagacgcggtgaagaagtagatagaattctggatcgtatgaagactgataaaatagatcatgatgaagaaacaaggaagatccttgacatgaggccaacctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

493

Amino Acids

56.15

Weight (kDa)

6.96

Isoelectric Point (pI)

34.03

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012342)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21705
fragaria_vesca	FvH4_3g09350
malus_domestica	MD00G1095800.v1.1 MD05G1313800.v1.1
prunus_persica	Prupe.4G045900_v2.0.a1
pyrus_communis	pycom05g29160 pycom10g24750
rosa_chinensis	RchiOBHm_Chr5g0008241
rosa_laevigata	RLG00000031552
rosa_multiflora	Rmu_co8293593.1_g000001 Rmu_sc0001387.1_g000002 Rmu_sc0001626.1_g000024
rosa_roxburghii	Rroxscaffold_1G00068250
rosa_rugosa	Rorug04G0434700
rosa_samantha	Rh5AG063000 Rh5BG059200 Rh5CG069900 Rh5DG058800
rosa_wichuraiana	Rw5G005800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	155, 442
Acc16I	TGCGCA	1 cut(s)	461
Acc36I	ACCTGC	1 cut(s)	45
AccB7I	CCANNNNNTGG	1 cut(s)	133
AccI	GTMKAC	1 cut(s)	524
AccII	CGCG	3 cut(s)	44, 207, 1386
AccIII	TCCGGA	1 cut(s)	139
AciI	CCGC	3 cut(s)	534, 1301, 1386
AclWI	GGATC	5 cut(s)	12, 518, 1324, 1419, 1453
AcoI	YGGCCR	1 cut(s)	287
AcsI	RAATTY	1 cut(s)	1404
AcuI	CTGAAG	1 cut(s)	586
AfeI	AGCGCT	1 cut(s)	227
AfiI	CCNNNNNNNGG	1 cut(s)	133
AgsI	TTSAA	8 cut(s)	412, 650, 670, 968, 988, 1094, 1295, 1369
AjnI	CCWGG	1 cut(s)	553
AjuI	GAANNNNNNNTTGG	8 cut(s)	120, 152, 186, 218, 798, 830, 1296, 1328
Alw21I	GWGCWC	3 cut(s)	147, 192, 406
Alw26I	GTCTC	2 cut(s)	163, 948
AlwI	GGATC	5 cut(s)	12, 518, 1324, 1419, 1453
Aor13HI	TCCGGA	1 cut(s)	139
Aor51HI	AGCGCT	1 cut(s)	227
AoxI	GGCC	3 cut(s)	287, 748, 1472
ApeKI	GCWGC	3 cut(s)	307, 427, 1148
ApoI	RAATTY	1 cut(s)	1404
AspLEI	GCGC	4 cut(s)	222, 228, 462, 1207
AspS9I	GGNCC	3 cut(s)	57, 75, 550
AsuHPI	GGTGA	6 cut(s)	646, 961, 971, 1181, 1289, 1400
AvaII	GGWCC	3 cut(s)	57, 75, 550
BamHI	GGATCC	1 cut(s)	4
BanII	GRGCYC	2 cut(s)	147, 192
BbsI	GAAGAC	2 cut(s)	1101, 1427
Bbv12I	GWGCWC	3 cut(s)	147, 192, 406
BbvI	GCAGC	3 cut(s)	319, 439, 1135
BccI	CCATC	6 cut(s)	368, 469, 670, 973, 1096, 1168
BceAI	ACGGC	1 cut(s)	287
BciT130I	CCWGG	1 cut(s)	555
BciVI	GTATCC	1 cut(s)	793
BclI	TGATCA	1 cut(s)	1251
BcoDI	GTCTC	2 cut(s)	163, 948
BfaI	CTAG	1 cut(s)	1480
BfmI	CTRYAG	3 cut(s)	242, 388, 607
BfoI	RGCGCY	1 cut(s)	229
BfuAI	ACCTGC	1 cut(s)	45
BfuI	GTATCC	1 cut(s)	793
BisI	GCNGC	3 cut(s)	308, 428, 1149
BlsI	GCNGC	3 cut(s)	309, 429, 1150
Bme1390I	CCNGG	1 cut(s)	555
Bme18I	GGWCC	3 cut(s)	57, 75, 550
BmgT120I	GGNCC	3 cut(s)	57, 75, 550
BmiI	GGNNCC	3 cut(s)	6, 138, 552
BmrFI	CCNGG	1 cut(s)	555
BmrI	ACTGGG	2 cut(s)	163, 1331
BmsI	GCATC	5 cut(s)	207, 627, 760, 899, 1288
BmuI	ACTGGG	2 cut(s)	163, 1331
BpiI	GAAGAC	2 cut(s)	1101, 1427
BpmI	CTGGAG	1 cut(s)	416
BpuEI	CTTGAG	2 cut(s)	219, 908
BsaI	GGTCTC	1 cut(s)	163
BsaJI	CCNNGG	2 cut(s)	448, 553
BsaWI	WCCGGW	1 cut(s)	139
BsaXI	ACNNNNNCTCC	4 cut(s)	143, 173, 464, 494
Bsc4I	CCNNNNNNNGG	1 cut(s)	133
Bse1I	ACTGG	3 cut(s)	158, 710, 1337
BseAI	TCCGGA	1 cut(s)	139
BseBI	CCWGG	1 cut(s)	555
BseDI	CCNNGG	2 cut(s)	448, 553
BseGI	GGATG	4 cut(s)	33, 264, 379, 868
BseLI	CCNNNNNNNGG	1 cut(s)	133
BseMII	CTCAG	5 cut(s)	243, 558, 966, 1222, 1256
BseNI	ACTGG	3 cut(s)	158, 710, 1337
BseRI	GAGGAG	1 cut(s)	7
BseX3I	CGGCCG	1 cut(s)	287
BseXI	GCAGC	3 cut(s)	319, 439, 1135
BsgI	GTGCAG	1 cut(s)	326
Bsh1236I	CGCG	3 cut(s)	44, 207, 1386
Bsh1285I	CGRYCG	1 cut(s)	290
BshFI	GGCC	3 cut(s)	289, 750, 1474
BsiEI	CGRYCG	1 cut(s)	290
BsiHKAI	GWGCWC	3 cut(s)	147, 192, 406
BsiSI	CCGG	3 cut(s)	73, 140, 424
BslFI	GGGAC	4 cut(s)	430, 536, 696, 935
BslI	CCNNNNNNNGG	1 cut(s)	133
BsmAI	GTCTC	2 cut(s)	163, 948
BsmFI	GGGAC	4 cut(s)	430, 536, 696, 935
BsmI	GAATGC	1 cut(s)	1289
BsnI	GGCC	3 cut(s)	289, 750, 1474
Bso31I	GGTCTC	1 cut(s)	163
Bsp1286I	GDGCHC	3 cut(s)	147, 192, 406
Bsp13I	TCCGGA	1 cut(s)	139
Bsp143I	GATC	8 cut(s)	4, 510, 643, 1251, 1316, 1411, 1435, 1458
Bsp68I	TCGCGA	1 cut(s)	207
BspACI	CCGC	3 cut(s)	534, 1301, 1386
BspANI	GGCC	3 cut(s)	289, 750, 1474
BspCNI	CTCAG	5 cut(s)	244, 559, 967, 1221, 1257
BspEI	TCCGGA	1 cut(s)	139
BspFNI	CGCG	3 cut(s)	44, 207, 1386
BspHI	TCATGA	1 cut(s)	1438
BspLI	GGNNCC	3 cut(s)	6, 138, 552
BspMI	ACCTGC	1 cut(s)	45
BspPI	GGATC	5 cut(s)	12, 518, 1324, 1419, 1453
BspTNI	GGTCTC	1 cut(s)	163
BsrI	ACTGG	3 cut(s)	158, 710, 1337
BssECI	CCNNGG	2 cut(s)	448, 553
BssMI	GATC	8 cut(s)	4, 510, 643, 1251, 1316, 1411, 1435, 1458
BssNAI	GTATAC	1 cut(s)	525
BssT1I	CCWWGG	1 cut(s)	448
Bst1107I	GTATAC	1 cut(s)	525
Bst2UI	CCWGG	1 cut(s)	555
Bst4CI	ACNGT	4 cut(s)	389, 1013, 1039, 1169
Bst6I	CTCTTC	3 cut(s)	345, 783, 887
BstAPI	GCANNNNNTGC	1 cut(s)	304
BstC8I	GCNNGC	6 cut(s)	188, 218, 224, 300, 564, 748
BstDEI	CTNAG	5 cut(s)	252, 567, 975, 1208, 1265
BstF5I	GGATG	4 cut(s)	33, 264, 379, 868
BstFNI	CGCG	3 cut(s)	44, 207, 1386
BstH2I	RGCGCY	1 cut(s)	229
BstHHI	GCGC	4 cut(s)	222, 228, 462, 1207
BstKTI	GATC	8 cut(s)	7, 513, 646, 1254, 1319, 1414, 1438, 1461
BstMAI	GTCTC	2 cut(s)	163, 948
BstMBI	GATC	8 cut(s)	4, 510, 643, 1251, 1316, 1411, 1435, 1458
BstMCI	CGRYCG	1 cut(s)	290
BstMWI	GCNNNNNNNGC	7 cut(s)	204, 213, 295, 304, 466, 725, 770
BstNI	CCWGG	1 cut(s)	555
BstNSI	RCATGY	2 cut(s)	302, 937
BstSCI	CCNGG	1 cut(s)	553
BstSFI	CTRYAG	3 cut(s)	242, 388, 607
BstUI	CGCG	3 cut(s)	44, 207, 1386
BstV1I	GCAGC	3 cut(s)	319, 439, 1135
BstV2I	GAAGAC	2 cut(s)	1101, 1427
BstX2I	RGATCY	2 cut(s)	4, 1458
BstYI	RGATCY	2 cut(s)	4, 1458
BstZ17I	GTATAC	1 cut(s)	525
BstZI	CGGCCG	1 cut(s)	287
BsuI	GTATCC	1 cut(s)	793
BsuRI	GGCC	3 cut(s)	289, 750, 1474
BtsCI	GGATG	4 cut(s)	33, 264, 379, 868
BtsI	GCAGTG	1 cut(s)	1294
BtsIMutI	CAGTG	3 cut(s)	1216, 1294, 1344
BtuMI	TCGCGA	1 cut(s)	207
BveI	ACCTGC	1 cut(s)	45
Cac8I	GCNNGC	6 cut(s)	188, 218, 224, 300, 564, 748
CciI	TCATGA	1 cut(s)	1438
CfoI	GCGC	4 cut(s)	222, 228, 462, 1207
Cfr13I	GGNCC	3 cut(s)	57, 75, 550
CseI	GACGC	2 cut(s)	169, 1392
CviAII	CATG	9 cut(s)	299, 514, 542, 700, 934, 1195, 1358, 1439, 1468
DdeI	CTNAG	5 cut(s)	252, 567, 975, 1208, 1265
DpnI	GATC	8 cut(s)	6, 512, 645, 1253, 1318, 1413, 1437, 1460
DpnII	GATC	8 cut(s)	4, 510, 643, 1251, 1316, 1411, 1435, 1458
DraI	TTTAAA	1 cut(s)	1188
DrdI	GACNNNNNNGTC	2 cut(s)	155, 442
DseDI	GACNNNNNNGTC	2 cut(s)	155, 442
EaeI	YGGCCR	1 cut(s)	287
EagI	CGGCCG	1 cut(s)	287
Eam1104I	CTCTTC	3 cut(s)	345, 783, 887
EarI	CTCTTC	3 cut(s)	345, 783, 887
Ecl136II	GAGCTC	2 cut(s)	145, 190
EclXI	CGGCCG	1 cut(s)	287
Eco130I	CCWWGG	1 cut(s)	448
Eco24I	GRGCYC	2 cut(s)	147, 192
Eco31I	GGTCTC	1 cut(s)	163
Eco47I	GGWCC	3 cut(s)	57, 75, 550
Eco47III	AGCGCT	1 cut(s)	227
Eco52I	CGGCCG	1 cut(s)	287
Eco53kI	GAGCTC	2 cut(s)	145, 190
Eco57I	CTGAAG	1 cut(s)	586
EcoICRI	GAGCTC	2 cut(s)	145, 190
EcoO109I	RGGNCCY	2 cut(s)	57, 550
EcoRI	GAATTC	1 cut(s)	1404
EcoRII	CCWGG	1 cut(s)	553
EcoT14I	CCWWGG	1 cut(s)	448
EcoT22I	ATGCAT	3 cut(s)	914, 935, 1363
EcoT38I	GRGCYC	2 cut(s)	147, 192
ErhI	CCWWGG	1 cut(s)	448
FaeI	CATG	9 cut(s)	302, 517, 545, 703, 937, 1198, 1361, 1442, 1471
FalI	AAGNNNNNCTT	2 cut(s)	1074, 1106
FaqI	GGGAC	4 cut(s)	430, 536, 696, 935
FatI	CATG	9 cut(s)	298, 513, 541, 699, 933, 1194, 1357, 1438, 1467
FauNDI	CATATG	2 cut(s)	397, 1375
FbaI	TGATCA	1 cut(s)	1251
FblI	GTMKAC	1 cut(s)	524
Fnu4HI	GCNGC	3 cut(s)	308, 428, 1149
FokI	GGATG	4 cut(s)	20, 271, 386, 875
FriOI	GRGCYC	2 cut(s)	147, 192
Fsp4HI	GCNGC	3 cut(s)	308, 428, 1149
FspBI	CTAG	1 cut(s)	1480
FspI	TGCGCA	1 cut(s)	461
GlaI	GCGC	4 cut(s)	221, 227, 461, 1206
GluI	GCNGC	3 cut(s)	308, 428, 1149
GsuI	CTGGAG	1 cut(s)	416
HaeII	RGCGCY	1 cut(s)	229
HaeIII	GGCC	3 cut(s)	289, 750, 1474
HapII	CCGG	3 cut(s)	73, 140, 424
HgaI	GACGC	2 cut(s)	169, 1392
HhaI	GCGC	4 cut(s)	222, 228, 462, 1207
Hin1II	CATG	9 cut(s)	302, 517, 545, 703, 937, 1198, 1361, 1442, 1471
Hin6I	GCGC	4 cut(s)	220, 226, 460, 1205
HinP1I	GCGC	4 cut(s)	220, 226, 460, 1205
HindIII	AAGCTT	1 cut(s)	1182
HinfI	GANTC	2 cut(s)	612, 654
HpaII	CCGG	3 cut(s)	73, 140, 424
HphI	GGTGA	6 cut(s)	646, 961, 971, 1181, 1289, 1400
Hpy166II	GTNNAC	3 cut(s)	525, 1218, 1342
Hpy188I	TCNGA	6 cut(s)	38, 116, 123, 253, 643, 787
Hpy8I	GTNNAC	3 cut(s)	525, 1218, 1342
Hpy99I	CGWCG	2 cut(s)	152, 185
HpyCH4III	ACNGT	4 cut(s)	389, 1013, 1039, 1169
HpyCH4V	TGCA	9 cut(s)	279, 307, 469, 618, 912, 933, 1194, 1287, 1361
HpyF10VI	GCNNNNNNNGC	7 cut(s)	204, 213, 295, 304, 466, 725, 770
HpyF3I	CTNAG	5 cut(s)	252, 567, 975, 1208, 1265
Hsp92II	CATG	9 cut(s)	302, 517, 545, 703, 937, 1198, 1361, 1442, 1471
HspAI	GCGC	4 cut(s)	220, 226, 460, 1205
Kpn2I	TCCGGA	1 cut(s)	139
Ksp22I	TGATCA	1 cut(s)	1251
Kzo9I	GATC	8 cut(s)	4, 510, 643, 1251, 1316, 1411, 1435, 1458
LmnI	GCTCC	3 cut(s)	142, 195, 435
Lsp1109I	GCAGC	3 cut(s)	319, 439, 1135
LweI	GCATC	5 cut(s)	207, 627, 760, 899, 1288
MaeI	CTAG	1 cut(s)	1480
MalI	GATC	8 cut(s)	6, 512, 645, 1253, 1318, 1413, 1437, 1460
MboI	GATC	8 cut(s)	4, 510, 643, 1251, 1316, 1411, 1435, 1458
MflI	RGATCY	2 cut(s)	4, 1458
MhlI	GDGCHC	3 cut(s)	147, 192, 406
MluCI	AATT	3 cut(s)	364, 412, 1404
MlyI	GAGTC	1 cut(s)	663
MmeI	TCCRAC	4 cut(s)	217, 765, 777, 1294
Mph1103I	ATGCAT	3 cut(s)	914, 935, 1363
MroI	TCCGGA	1 cut(s)	139
MseI	TTAA	3 cut(s)	776, 1128, 1187
MslI	CAYNNNNRTG	2 cut(s)	698, 938
MspA1I	CMGCKG	1 cut(s)	310
MspI	CCGG	3 cut(s)	73, 140, 424
MspR9I	CCNGG	1 cut(s)	555
Mva1269I	GAATGC	1 cut(s)	1289
MvaI	CCWGG	1 cut(s)	555
MvnI	CGCG	3 cut(s)	44, 207, 1386
MwoI	GCNNNNNNNGC	7 cut(s)	204, 213, 295, 304, 466, 725, 770
NdeI	CATATG	2 cut(s)	397, 1375
NdeII	GATC	8 cut(s)	4, 510, 643, 1251, 1316, 1411, 1435, 1458
NlaIII	CATG	9 cut(s)	302, 517, 545, 703, 937, 1198, 1361, 1442, 1471
NlaIV	GGNNCC	3 cut(s)	6, 138, 552
NmeAIII	GCCGAG	1 cut(s)	315
NruI	TCGCGA	1 cut(s)	207
NsbI	TGCGCA	1 cut(s)	461
NsiI	ATGCAT	3 cut(s)	914, 935, 1363
NspI	RCATGY	2 cut(s)	302, 937
PaeI	GCATGC	1 cut(s)	302
PagI	TCATGA	1 cut(s)	1438
PctI	GAATGC	1 cut(s)	1289
PfeI	GAWTC	1 cut(s)	612
PflFI	GACNNNGTC	1 cut(s)	155
PflMI	CCANNNNNTGG	1 cut(s)	133
PkrI	GCNGC	3 cut(s)	309, 429, 1150
PleI	GAGTC	1 cut(s)	662
PpsI	GAGTC	1 cut(s)	662
PpuMI	RGGWCCY	2 cut(s)	57, 550
Psp124BI	GAGCTC	2 cut(s)	147, 192
Psp5II	RGGWCCY	2 cut(s)	57, 550
Psp6I	CCWGG	1 cut(s)	553
PspGI	CCWGG	1 cut(s)	553
PspN4I	GGNNCC	3 cut(s)	6, 138, 552
PspPI	GGNCC	3 cut(s)	57, 75, 550
PspPPI	RGGWCCY	2 cut(s)	57, 550
PsuI	RGATCY	2 cut(s)	4, 1458
PsyI	GACNNNGTC	1 cut(s)	155
PvuII	CAGCTG	1 cut(s)	310
RruI	TCGCGA	1 cut(s)	207
RseI	CAYNNNNRTG	2 cut(s)	698, 938
SacI	GAGCTC	2 cut(s)	147, 192
SaqAI	TTAA	3 cut(s)	776, 1128, 1187
SatI	GCNGC	3 cut(s)	308, 428, 1149
Sau3AI	GATC	8 cut(s)	4, 510, 643, 1251, 1316, 1411, 1435, 1458
Sau96I	GGNCC	3 cut(s)	57, 75, 550
SchI	GAGTC	1 cut(s)	663
ScrFI	CCNGG	1 cut(s)	555
SduI	GDGCHC	3 cut(s)	147, 192, 406
SfaNI	GCATC	5 cut(s)	207, 627, 760, 899, 1288
SfcI	CTRYAG	3 cut(s)	242, 388, 607
SinI	GGWCC	3 cut(s)	57, 75, 550
SmiMI	CAYNNNNRTG	2 cut(s)	698, 938
SmlI	CTYRAG	2 cut(s)	234, 887
SmoI	CTYRAG	2 cut(s)	234, 887
SphI	GCATGC	1 cut(s)	302
Sse9I	AATT	3 cut(s)	364, 412, 1404
SsiI	CCGC	3 cut(s)	534, 1301, 1386
SspMI	CTAG	1 cut(s)	1480
SstI	GAGCTC	2 cut(s)	147, 192
StyD4I	CCNGG	1 cut(s)	553
StyI	CCWWGG	1 cut(s)	448
TaaI	ACNGT	4 cut(s)	389, 1013, 1039, 1169
TaqI	TCGA	3 cut(s)	147, 657, 1024
TasI	AATT	3 cut(s)	364, 412, 1404
TfiI	GAWTC	1 cut(s)	612
Tru1I	TTAA	3 cut(s)	776, 1128, 1187
Tru9I	TTAA	3 cut(s)	776, 1128, 1187
TscAI	CASTG	3 cut(s)	1216, 1294, 1344
TseI	GCWGC	3 cut(s)	307, 427, 1148
TspDTI	ATGAA	6 cut(s)	275, 587, 879, 1296, 1433, 1458
TspGWI	ACGGA	4 cut(s)	10, 452, 818, 1246
TspRI	CASTG	3 cut(s)	1216, 1294, 1344
Tth111I	GACNNNGTC	1 cut(s)	155
Van91I	CCANNNNNTGG	1 cut(s)	133
VpaK11BI	GGWCC	3 cut(s)	57, 75, 550
XapI	RAATTY	1 cut(s)	1404
XceI	RCATGY	2 cut(s)	302, 937
XmiI	GTMKAC	1 cut(s)	524
XspI	CTAG	1 cut(s)	1480
Zsp2I	ATGCAT	3 cut(s)	914, 935, 1363

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.