Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr00

Orthogroup ID

OG0010654

Physical Location & Seq

Genomic Coordinates Reverse (-)

30846679 .. 30853443

Gene Structure 6765 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD00G1141200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 954 bp

ATGGGCGAAAACAAATCCGAAACTTTGTATTTTGATCTGAATACGGGAGCTAAGATCCCATCTGTTGGTCTTGGAACGTGGAAGGCTGAACCAGGCGTGGTCGGTCAAGCTGTCATCGCTGCAGTCAAGAATGGCTACAGGCATATTGACTGTGCATCAGTCTACGGAAACGAAAAAGAGGTAGGGGTGGCACTGAAGGAACTATTTTCAACTGGCGTAGTACAGCGTAGCGAACTCTTCATTACATCTAAGTTATGGTGCAGTGACCATGCCCCTGAAGACGTATCTAAGGCACTGAGCAAGACTTTAGAAGATCTGCAGCTTGATTATATTGATCTATATCTTATACACTATCCACTTCGTACAAAGCCGGGCTCAGTAGGTTTTGCTCCTGAAGTCATGGTTCCATTGTGCCTTCCAGAGACTTGGAATGCAATGGAAGGCCTGTACGCATCTGGTCAGGCACGAGCAATCGGGGTGAGCAACTACTCGTCTAAGAAGCTGCAGGACCTCCTTTCTTATGCAAAAGTTCCACCTGCAGTAAATCAAGTGGAGTGCCACCCTATCTGGCAGCAACCGGCTCTTCACAATTTGTGCAAATCTGCTGGAATTCATCTGTCGGCATATTCTCCTCTGGGTTCTCCAGGGGTTTTGGTGAAGGGGGAAGTTCTGAAGGATCCAGTACTGAATGAAATCGCCAAGAAACTCAACAAGTCAACCGCGCAAGTATGTCTTCGTTGGGGCATTCAGAGTGGACACAGCGTCCTTCCAAAGAGTGTAAATGAAAGTAGGATCAAGGAAAATCTAAGCTTATTCGACTGGTCCATTCCCCCAGAGCTCTTCTCGAAAATTTTGGGAATCCACCAGCAAAGGCTCCTACGGGGTGATTTCGTAGTCCATGAGAGCTTGAGTCCTTATAAAAGCGTTGAAGAACTGTGGGATGGTGAAATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001101 GO:0003674 GO:0003824 GO:0004033 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006950 GO:0006970 GO:0008106 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009414 GO:0009415 GO:0009507 GO:0009536 GO:0009628 GO:0009651 GO:0010035 GO:0016229 GO:0016491 GO:0016614 GO:0016616 GO:0036094 GO:0042221 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048037 GO:0050661 GO:0050662 GO:0050896 GO:0055114 GO:0070401 GO:0097159 GO:1901265 GO:1901363 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00010 ko00040 ko00051 ko00052 ko00561 ko00790 ko00930 ko01100 ko01110 ko01120 ko01130 ko01220 map00010 map00040 map00051 map00052 map00561 map00790 map00930 map01100 map01110 map01120 map01130 map01220

Pfam Domains

Protein Families

Aldo_ket_red

Protein Analysis

318

Amino Acids

34.83

Weight (kDa)

6.32

Isoelectric Point (pI)

45.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aldo_ket_red	PF00248	23 - 284	3.1e-52	Aldo/keto reductase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010654)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37760 AT2G37760 AT2G37760 AT2G37760 AT2G37760 AT2G37760 AT2G37760
fragaria_vesca	FvH4_6g12990
malus_domestica	MD00G1141200.v1.1
prunus_persica	Prupe.6G262200_v2.0.a1 Prupe.6G262200_v2.0.a1
pyrus_communis	pycom04g12390
rosa_chinensis	RchiOBHm_Chr3g0465121
rosa_multiflora	Rmu_sc0018026.1_g000001
rosa_roxburghii	Rroxscaffold_6G00415230
rosa_rugosa	Rorug03G0075600 Rorug03G0075600
rosa_samantha	Rh3BG139200 Rh3DG140500
rosa_wichuraiana	Rw3G011390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	918
AarI	CACCTGC	1 cut(s)	544
Acc36I	ACCTGC	1 cut(s)	544
AccB7I	CCANNNNNTGG	1 cut(s)	65
AccI	GTMKAC	1 cut(s)	162
AccII	CGCG	1 cut(s)	722
AciI	CCGC	1 cut(s)	720
AclWI	GGATC	4 cut(s)	49, 671, 684, 800
AcsI	RAATTY	2 cut(s)	609, 849
AcuI	CTGAAG	4 cut(s)	215, 297, 414, 692
AfaI	GTAC	4 cut(s)	222, 364, 449, 684
AfiI	CCNNNNNNNGG	1 cut(s)	65
AgsI	TTSAA	2 cut(s)	210, 929
AhdI	GACNNNNNGTC	1 cut(s)	761
AjnI	CCWGG	2 cut(s)	91, 643
AluBI	AGCT	7 cut(s)	50, 110, 322, 502, 810, 838, 906
AluI	AGCT	7 cut(s)	50, 110, 322, 502, 810, 838, 906
Alw21I	GWGCWC	1 cut(s)	840
Alw26I	GTCTC	1 cut(s)	416
AlwI	GGATC	4 cut(s)	49, 671, 684, 800
AoxI	GGCC	1 cut(s)	442
ApeKI	GCWGC	4 cut(s)	119, 319, 502, 571
ApoI	RAATTY	2 cut(s)	609, 849
AspLEI	GCGC	1 cut(s)	724
AspS9I	GGNCC	2 cut(s)	508, 822
AsuC2I	CCSGG	1 cut(s)	372
AsuHPI	GGTGA	3 cut(s)	490, 667, 896
AvaII	GGWCC	2 cut(s)	508, 822
BamHI	GGATCC	1 cut(s)	676
BanII	GRGCYC	2 cut(s)	377, 840
BauI	CACGAG	1 cut(s)	465
BbsI	GAAGAC	2 cut(s)	285, 725
Bbv12I	GWGCWC	1 cut(s)	840
BbvI	GCAGC	4 cut(s)	106, 331, 489, 583
BccI	CCATC	2 cut(s)	67, 935
BciT130I	CCWGG	2 cut(s)	93, 645
BcnI	CCSGG	1 cut(s)	372
BcoDI	GTCTC	1 cut(s)	416
BfmI	CTRYAG	5 cut(s)	120, 136, 317, 503, 537
BfuAI	ACCTGC	1 cut(s)	544
BglII	AGATCT	1 cut(s)	313
BisI	GCNGC	4 cut(s)	120, 320, 503, 572
BlsI	GCNGC	4 cut(s)	121, 321, 504, 573
BmcAI	AGTACT	1 cut(s)	684
Bme1390I	CCNGG	3 cut(s)	93, 372, 645
Bme18I	GGWCC	2 cut(s)	508, 822
BmeRI	GACNNNNNGTC	1 cut(s)	761
BmgT120I	GGNCC	2 cut(s)	508, 822
BmiI	GGNNCC	3 cut(s)	405, 678, 875
BmrFI	CCNGG	3 cut(s)	93, 372, 645
BmsI	GCATC	2 cut(s)	164, 461
BpiI	GAAGAC	2 cut(s)	285, 725
BplI	GAGNNNNNCTC	2 cut(s)	827, 859
BpmI	CTGGAG	1 cut(s)	627
BpuEI	CTTGAG	1 cut(s)	928
BpuMI	CCSGG	1 cut(s)	372
BsaBI	GATNNNNATC	1 cut(s)	339
BsaJI	CCNNGG	1 cut(s)	644
Bsc4I	CCNNNNNNNGG	1 cut(s)	65
Bse118I	RCCGGY	1 cut(s)	577
Bse1I	ACTGG	3 cut(s)	217, 680, 824
Bse3DI	GCAATG	1 cut(s)	441
Bse8I	GATNNNNATC	1 cut(s)	339
BseBI	CCWGG	2 cut(s)	93, 645
BseDI	CCNNGG	1 cut(s)	644
BseGI	GGATG	1 cut(s)	946
BseJI	GATNNNNATC	1 cut(s)	339
BseLI	CCNNNNNNNGG	1 cut(s)	65
BseMI	GCAATG	1 cut(s)	441
BseMII	CTCAG	2 cut(s)	287, 390
BseNI	ACTGG	3 cut(s)	217, 680, 824
BseRI	GAGGAG	1 cut(s)	621
BseXI	GCAGC	4 cut(s)	106, 331, 489, 583
BsgI	GTGCAG	1 cut(s)	280
Bsh1236I	CGCG	1 cut(s)	722
BshFI	GGCC	1 cut(s)	444
BsiHKAI	GWGCWC	1 cut(s)	840
BsiSI	CCGG	2 cut(s)	371, 578
BslI	CCNNNNNNNGG	1 cut(s)	65
BsmAI	GTCTC	1 cut(s)	416
BsmI	GAATGC	2 cut(s)	436, 744
BsnI	GGCC	1 cut(s)	444
Bsp1286I	GDGCHC	2 cut(s)	377, 840
Bsp143I	GATC	6 cut(s)	34, 54, 313, 334, 676, 792
BspACI	CCGC	1 cut(s)	720
BspANI	GGCC	1 cut(s)	444
BspCNI	CTCAG	2 cut(s)	288, 389
BspFNI	CGCG	1 cut(s)	722
BspLI	GGNNCC	3 cut(s)	405, 678, 875
BspMAI	CTGCAG	4 cut(s)	124, 321, 507, 541
BspMI	ACCTGC	1 cut(s)	544
BspPI	GGATC	4 cut(s)	49, 671, 684, 800
BspQI	GCTCTTC	2 cut(s)	588, 845
BsrDI	GCAATG	1 cut(s)	441
BsrFI	RCCGGY	1 cut(s)	577
BsrI	ACTGG	3 cut(s)	217, 680, 824
BssAI	RCCGGY	1 cut(s)	577
BssECI	CCNNGG	1 cut(s)	644
BssMI	GATC	6 cut(s)	34, 54, 313, 334, 676, 792
BssSI	CACGAG	1 cut(s)	465
Bst2BI	CACGAG	1 cut(s)	465
Bst2UI	CCWGG	2 cut(s)	93, 645
Bst4CI	ACNGT	2 cut(s)	152, 936
Bst6I	CTCTTC	3 cut(s)	242, 588, 845
BstDEI	CTNAG	7 cut(s)	51, 249, 288, 296, 376, 495, 806
BstF5I	GGATG	1 cut(s)	946
BstFNI	CGCG	1 cut(s)	722
BstHHI	GCGC	1 cut(s)	724
BstKTI	GATC	6 cut(s)	37, 57, 316, 337, 679, 795
BstMAI	GTCTC	1 cut(s)	416
BstMBI	GATC	6 cut(s)	34, 54, 313, 334, 676, 792
BstMWI	GCNNNNNNNGC	1 cut(s)	116
BstNI	CCWGG	2 cut(s)	93, 645
BstSCI	CCNGG	3 cut(s)	91, 370, 643
BstSFI	CTRYAG	5 cut(s)	120, 136, 317, 503, 537
BstUI	CGCG	1 cut(s)	722
BstV1I	GCAGC	4 cut(s)	106, 331, 489, 583
BstV2I	GAAGAC	2 cut(s)	285, 725
BstX2I	RGATCY	3 cut(s)	54, 313, 676
BstXI	CCANNNNNNTGG	1 cut(s)	426
BstYI	RGATCY	3 cut(s)	54, 313, 676
BsuRI	GGCC	1 cut(s)	444
BtgZI	GCGATG	1 cut(s)	100
BtsCI	GGATG	1 cut(s)	946
BtsI	GCAGTG	1 cut(s)	268
BtsIMutI	CAGTG	3 cut(s)	191, 268, 293
BveI	ACCTGC	1 cut(s)	544
CfoI	GCGC	1 cut(s)	724
Cfr10I	RCCGGY	1 cut(s)	577
Cfr13I	GGNCC	2 cut(s)	508, 822
CseI	GACGC	1 cut(s)	751
Csp6I	GTAC	4 cut(s)	221, 363, 448, 683
CviAII	CATG	3 cut(s)	269, 400, 899
CviQI	GTAC	4 cut(s)	221, 363, 448, 683
DdeI	CTNAG	7 cut(s)	51, 249, 288, 296, 376, 495, 806
DpnI	GATC	6 cut(s)	36, 56, 315, 336, 678, 794
DpnII	GATC	6 cut(s)	34, 54, 313, 334, 676, 792
DriI	GACNNNNNGTC	1 cut(s)	761
Eam1104I	CTCTTC	3 cut(s)	242, 588, 845
Eam1105I	GACNNNNNGTC	1 cut(s)	761
EarI	CTCTTC	3 cut(s)	242, 588, 845
Ecl136II	GAGCTC	1 cut(s)	838
Eco147I	AGGCCT	1 cut(s)	444
Eco24I	GRGCYC	2 cut(s)	377, 840
Eco47I	GGWCC	2 cut(s)	508, 822
Eco53kI	GAGCTC	1 cut(s)	838
Eco57I	CTGAAG	4 cut(s)	215, 297, 414, 692
EcoICRI	GAGCTC	1 cut(s)	838
EcoO109I	RGGNCCY	1 cut(s)	508
EcoRI	GAATTC	1 cut(s)	609
EcoRII	CCWGG	2 cut(s)	91, 643
EcoT38I	GRGCYC	2 cut(s)	377, 840
FaeI	CATG	3 cut(s)	272, 403, 902
FalI	AAGNNNNNCTT	2 cut(s)	717, 749
FatI	CATG	3 cut(s)	268, 399, 898
FblI	GTMKAC	1 cut(s)	162
Fnu4HI	GCNGC	4 cut(s)	120, 320, 503, 572
FriOI	GRGCYC	2 cut(s)	377, 840
Fsp4HI	GCNGC	4 cut(s)	120, 320, 503, 572
GlaI	GCGC	1 cut(s)	723
GluI	GCNGC	4 cut(s)	120, 320, 503, 572
GsuI	CTGGAG	1 cut(s)	627
HaeIII	GGCC	1 cut(s)	444
HapII	CCGG	2 cut(s)	371, 578
HgaI	GACGC	1 cut(s)	751
HhaI	GCGC	1 cut(s)	724
Hin1II	CATG	3 cut(s)	272, 403, 902
Hin6I	GCGC	1 cut(s)	722
HinP1I	GCGC	1 cut(s)	722
HincII	GTYRAC	1 cut(s)	717
HindII	GTYRAC	1 cut(s)	717
HindIII	AAGCTT	1 cut(s)	808
HinfI	GANTC	2 cut(s)	858, 910
HpaII	CCGG	2 cut(s)	371, 578
HphI	GGTGA	3 cut(s)	490, 667, 896
Hpy166II	GTNNAC	3 cut(s)	163, 717, 755
Hpy188I	TCNGA	4 cut(s)	19, 39, 672, 750
Hpy188III	TCNNGA	4 cut(s)	127, 392, 419, 844
Hpy8I	GTNNAC	3 cut(s)	163, 717, 755
HpyAV	CCTTC	7 cut(s)	76, 190, 425, 434, 652, 667, 776
HpyCH4III	ACNGT	2 cut(s)	152, 936
HpyCH4IV	ACGT	2 cut(s)	77, 282
HpyCH4V	TGCA	9 cut(s)	122, 155, 261, 319, 434, 505, 524, 539, 597
HpyF10VI	GCNNNNNNNGC	1 cut(s)	116
HpyF3I	CTNAG	7 cut(s)	51, 249, 288, 296, 376, 495, 806
HpySE526I	ACGT	2 cut(s)	77, 282
Hsp92II	CATG	3 cut(s)	272, 403, 902
HspAI	GCGC	1 cut(s)	722
Kzo9I	GATC	6 cut(s)	34, 54, 313, 334, 676, 792
LguI	GCTCTTC	2 cut(s)	588, 845
LmnI	GCTCC	3 cut(s)	47, 394, 879
Lsp1109I	GCAGC	4 cut(s)	106, 331, 489, 583
LweI	GCATC	2 cut(s)	164, 461
MaeII	ACGT	2 cut(s)	77, 282
MaeIII	GTNAC	1 cut(s)	263
MalI	GATC	6 cut(s)	36, 56, 315, 336, 678, 794
MboI	GATC	6 cut(s)	34, 54, 313, 334, 676, 792
MboII	GAAGA	7 cut(s)	229, 290, 323, 575, 725, 832, 941
MflI	RGATCY	3 cut(s)	54, 313, 676
MhlI	GDGCHC	2 cut(s)	377, 840
MluCI	AATT	3 cut(s)	589, 609, 849
MlyI	GAGTC	1 cut(s)	919
MnlI	CCTC	3 cut(s)	172, 521, 642
MspI	CCGG	2 cut(s)	371, 578
MspR9I	CCNGG	3 cut(s)	93, 372, 645
Mva1269I	GAATGC	2 cut(s)	436, 744
MvaI	CCWGG	2 cut(s)	93, 645
MvnI	CGCG	1 cut(s)	722
MwoI	GCNNNNNNNGC	1 cut(s)	116
NciI	CCSGG	1 cut(s)	372
NdeII	GATC	6 cut(s)	34, 54, 313, 334, 676, 792
NlaIII	CATG	3 cut(s)	272, 403, 902
NlaIV	GGNNCC	3 cut(s)	405, 678, 875
NmuCI	GTSAC	1 cut(s)	263
PaqCI	CACCTGC	1 cut(s)	544
PceI	AGGCCT	1 cut(s)	444
PciSI	GCTCTTC	2 cut(s)	588, 845
PctI	GAATGC	2 cut(s)	436, 744
PfeI	GAWTC	1 cut(s)	858
PflMI	CCANNNNNTGG	1 cut(s)	65
PkrI	GCNGC	4 cut(s)	121, 321, 504, 573
PleI	GAGTC	1 cut(s)	918
PpsI	GAGTC	1 cut(s)	918
PpuMI	RGGWCCY	1 cut(s)	508
PsiI	TTATAA	1 cut(s)	918
Psp124BI	GAGCTC	1 cut(s)	840
Psp5II	RGGWCCY	1 cut(s)	508
Psp6I	CCWGG	2 cut(s)	91, 643
PspGI	CCWGG	2 cut(s)	91, 643
PspN4I	GGNNCC	3 cut(s)	405, 678, 875
PspPI	GGNCC	2 cut(s)	508, 822
PspPPI	RGGWCCY	1 cut(s)	508
PstI	CTGCAG	4 cut(s)	124, 321, 507, 541
PsuI	RGATCY	3 cut(s)	54, 313, 676
RsaI	GTAC	4 cut(s)	222, 364, 449, 684
RsaNI	GTAC	4 cut(s)	221, 363, 448, 683
SacI	GAGCTC	1 cut(s)	840
SapI	GCTCTTC	2 cut(s)	588, 845
SatI	GCNGC	4 cut(s)	120, 320, 503, 572
Sau3AI	GATC	6 cut(s)	34, 54, 313, 334, 676, 792
Sau96I	GGNCC	2 cut(s)	508, 822
ScaI	AGTACT	1 cut(s)	684
SchI	GAGTC	1 cut(s)	919
ScrFI	CCNGG	3 cut(s)	93, 372, 645
SduI	GDGCHC	2 cut(s)	377, 840
SfaNI	GCATC	2 cut(s)	164, 461
SfcI	CTRYAG	5 cut(s)	120, 136, 317, 503, 537
SinI	GGWCC	2 cut(s)	508, 822
SmlI	CTYRAG	1 cut(s)	907
SmoI	CTYRAG	1 cut(s)	907
Sse9I	AATT	3 cut(s)	589, 609, 849
SseBI	AGGCCT	1 cut(s)	444
SsiI	CCGC	1 cut(s)	720
SstI	GAGCTC	1 cut(s)	840
StuI	AGGCCT	1 cut(s)	444
StyD4I	CCNGG	3 cut(s)	91, 370, 643
TaaI	ACNGT	2 cut(s)	152, 936
TaiI	ACGT	2 cut(s)	80, 285
TaqI	TCGA	2 cut(s)	816, 845
TaqII	GACCGA	1 cut(s)	92
TasI	AATT	3 cut(s)	589, 609, 849
TatI	WGTACW	2 cut(s)	220, 682
TfiI	GAWTC	1 cut(s)	858
TscAI	CASTG	3 cut(s)	198, 268, 300
TseFI	GTSAC	1 cut(s)	263
TseI	GCWGC	4 cut(s)	119, 319, 502, 571
Tsp45I	GTSAC	1 cut(s)	263
TspDTI	ATGAA	4 cut(s)	229, 602, 705, 798
TspGWI	ACGGA	1 cut(s)	180
TspRI	CASTG	3 cut(s)	198, 268, 300
Van91I	CCANNNNNTGG	1 cut(s)	65
VpaK11BI	GGWCC	2 cut(s)	508, 822
XapI	RAATTY	2 cut(s)	609, 849
XmiI	GTMKAC	1 cut(s)	162
ZrmI	AGTACT	1 cut(s)	684

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.