Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr00

Orthogroup ID

OG0016913

Physical Location & Seq

Genomic Coordinates Forward (+)

41605951 .. 41607444

Gene Structure 1494 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD00G1178300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1353 bp

ATGGCCACAGCAACTCAAGCGACCTTGAGTCTCTTTGCCGCTCCGCTGCCGGCCAAACCCCGCTCTCTCACCATCCGATGCTTAAAGTCCACCACTAGGACCACCAACCCACCCATCGTCGGCCGGAAGCTCCGAGCCGCCGTGATCGGAGCGGGCCCAGCTGGGTCCTCTGCCGCTGAGGCCTTGGCCACCGGCGGAGTGGAGTGTTTCATGTTCGAGCGGAGCGGTCCGTCCACCGCGAAACCATGCGGCGGAGCGATCCCTCTCTGCATGCTTGACGAGTTCGACATCCCATCCCACCTCATCGACCGCCAAGTCACTCGCATGAGGATCTTCTCCCCTTCGAATCTCGCCGTCGATTTCGGCAAAACCCTCCTCCCCCACGAGTTCATCGCCATGCTCCGCCGCGAAGTGCTCGACTCCTACCTCCGCACCCGCGCCCAGTCGCGCGGAGCCAACCTCATCTCAGGCCTCGTCACGGATCTCGAGGTCCCCACCTCGGTCGACGCGCCGTACGTGATCAGCTACACGGCGGACAACAAGCGGGAGTCGCTGGCGGTGGACGTCGTGATCGGGGCGGACGGCGCCAACAGCCGAGTCGCCAAGTCCATCAAGGCCGGAGACTACGCGTGCGCCATTGCGTTCCAGGAGAGGATTAAACTCCCGGACGATAAAATGGACTACTACCAAGATCTCGCCGAGATGTACGTGGGAAACGACGTGTCGCCCGATTTTTACGCGTGGGTTTTTCCCAAGTGCGACCACGTGGCCGTGGGGACTGGCACGGTGTGCTCCAAACAGGATATTAAGGTGTTCCAAAGGGCAATTAGGGCTAGGGCCCATTCTAAAATCAGCGGAGGGAAAGTGATCAAAGTGGAGGCCCATCCGATACCCGAACACCCCCGACCAACACGCGTTAGAGGACGCGTGGCATTGGTTGGGGATGCGGCAGGGTATGTGACGAAATGTTCGGGGGAGGGGATATACTTTGCGGCGAAATCGGGCAGATTGTGCGGCGAAGCGATCGTGAAGGCGTCAGAAGGAGGAGAGAGGATGATAAACGAAGGGGATTTGAAGAGGGAGTATTTGAAAGAGTGGGATGGCAAGTACATTACAACGTTTAGGTTTTTGGATTTGTTGCAAAAGGTGTTTTACGGGAGCGACGCGGCGAGGGAGGCGTTGGTGGAGTTGTGCGGCGACGAGTACGTGCAGCGGATGACGTTTGAGAGTTACTTGTACAAGAAGTTAGCGGATGGGAATAGGTGGGAGGATGCTAAGATGGTTTTGAATACCATTGGGAGTTTGGTGAGGTGTAACATTTTGGGCACGAAAATGGAGGGTTTGAAGTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006629 GO:0006644 GO:0006720 GO:0006721 GO:0006725 GO:0006766 GO:0006775 GO:0006778 GO:0006779 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0008654 GO:0009058 GO:0009110 GO:0009987 GO:0010189 GO:0015994 GO:0015995 GO:0016114 GO:0016491 GO:0018130 GO:0019438 GO:0019637 GO:0033013 GO:0033014 GO:0033385 GO:0033519 GO:0033521 GO:0034641 GO:0042360 GO:0042362 GO:0042440 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044271 GO:0044281 GO:0044283 GO:0045550 GO:0046148 GO:0046483 GO:0051186 GO:0051188 GO:0055114 GO:0071704 GO:0090407 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00860 ko00900 ko01100 ko01110 map00860 map00900 map01100 map01110

Pfam Domains

Protein Families

FAD_binding_3

Protein Analysis

451

Amino Acids

49.16

Weight (kDa)

8.81

Isoelectric Point (pI)

30.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_3	PF01494	45 - 331	1.2e-11	FAD binding domain
GGR_cat	PF22578	226 - 274	6.4e-07	Geranylgeranyl reductase catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016913)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g06120
malus_domestica	MD00G1178300.v1.1
prunus_persica	Prupe.6G153000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0333811
rosa_laevigata	RLG00000029529
rosa_multiflora	Rmu_sc0000026.1_g000018 Rmu_sc0007177.1_g000004
rosa_roxburghii	Rroxscaffold_4G00317220
rosa_rugosa	Rorug01G0112000
rosa_samantha	Rh1AG134400 Rh1BG102900 Rh1CG128000 Rh1DG139900
rosa_wichuraiana	Rw1G011210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	314
AatII	GACGTC	1 cut(s)	567
AccB1I	GGYRCC	1 cut(s)	584
AccBSI	CCGCTC	5 cut(s)	41, 63, 152, 220, 225
AccI	GTMKAC	1 cut(s)	504
AclI	AACGTT	1 cut(s)	1118
AclWI	GGATC	3 cut(s)	253, 338, 489
AcoI	YGGCCR	5 cut(s)	3, 51, 121, 186, 768
AcvI	CACGTG	1 cut(s)	766
AcyI	GRCGYC	3 cut(s)	564, 585, 1034
AdeI	CACNNNGTG	1 cut(s)	789
AfaI	GTAC	5 cut(s)	515, 707, 1109, 1205, 1238
AfiI	CCNNNNNNNGG	5 cut(s)	96, 119, 251, 478, 499
AflIII	ACRYGT	5 cut(s)	627, 720, 738, 913, 925
AgsI	TTSAA	4 cut(s)	1075, 1090, 1288, 1345
AhdI	GACNNNNNGTC	1 cut(s)	27
AjiI	CACGTC	1 cut(s)	721
AjnI	CCWGG	1 cut(s)	645
AluBI	AGCT	3 cut(s)	130, 161, 525
AluI	AGCT	3 cut(s)	130, 161, 525
Alw21I	GWGCWC	2 cut(s)	417, 794
Alw26I	GTCTC	2 cut(s)	35, 615
AlwI	GGATC	3 cut(s)	253, 338, 489
Ama87I	CYCGRG	1 cut(s)	485
ApaI	GGGCCC	2 cut(s)	158, 841
ApeKI	GCWGC	2 cut(s)	46, 1210
ArsI	GACNNNNNNTTYG	2 cut(s)	952, 984
AspLEI	GCGC	5 cut(s)	440, 450, 511, 587, 635
AspS9I	GGNCC	9 cut(s)	99, 154, 155, 165, 227, 490, 837, 838, 880
AsuC2I	CCSGG	1 cut(s)	665
AsuHPI	GGTGA	2 cut(s)	61, 1318
AsuII	TTCGAA	1 cut(s)	344
AvaI	CYCGRG	1 cut(s)	485
AvaII	GGWCC	4 cut(s)	99, 165, 227, 490
BaeGI	GKGCMC	3 cut(s)	158, 841, 1328
BalI	TGGCCA	2 cut(s)	5, 188
BanI	GGYRCC	1 cut(s)	584
BanII	GRGCYC	2 cut(s)	158, 841
BauI	CACGAG	1 cut(s)	383
BbrPI	CACGTG	1 cut(s)	766
Bbv12I	GWGCWC	2 cut(s)	417, 794
BbvCI	CCTCAGC	1 cut(s)	177
BbvI	GCAGC	2 cut(s)	33, 1222
BccI	CCATC	8 cut(s)	80, 122, 301, 617, 891, 1094, 1247, 1273
BceAI	ACGGC	6 cut(s)	125, 338, 496, 546, 598, 755
BciT130I	CCWGG	1 cut(s)	647
BclI	TGATCA	2 cut(s)	519, 867
BcnI	CCSGG	1 cut(s)	665
BcoDI	GTCTC	2 cut(s)	35, 615
BfaI	CTAG	2 cut(s)	96, 834
BfoI	RGCGCY	1 cut(s)	588
BglI	GCCNNNNNGGC	1 cut(s)	179
BglII	AGATCT	1 cut(s)	691
Bme1390I	CCNGG	2 cut(s)	647, 665
Bme18I	GGWCC	4 cut(s)	99, 165, 227, 490
BmeRI	GACNNNNNGTC	1 cut(s)	27
BmeT110I	CYCGRG	1 cut(s)	485
BmgBI	CACGTC	1 cut(s)	721
BmgT120I	GGNCC	9 cut(s)	99, 154, 155, 165, 227, 490, 837, 838, 880
BmiI	GGNNCC	6 cut(s)	156, 166, 454, 492, 586, 839
BmrFI	CCNGG	2 cut(s)	647, 665
BmrI	ACTGGG	1 cut(s)	436
BmsI	GCATC	3 cut(s)	68, 934, 1261
BmuI	ACTGGG	1 cut(s)	436
BplI	GAGNNNNNCTC	2 cut(s)	444, 476
Bpu10I	CCTNAGC	1 cut(s)	177
Bpu14I	TTCGAA	1 cut(s)	344
BpuEI	CTTGAG	1 cut(s)	46
BpuMI	CCSGG	1 cut(s)	665
BsaAI	YACGTR	4 cut(s)	517, 709, 766, 1207
BsaHI	GRCGYC	3 cut(s)	564, 585, 1034
BsaJI	CCNNGG	3 cut(s)	183, 498, 771
BsaXI	ACNNNNNCTCC	2 cut(s)	849, 879
Bsc4I	CCNNNNNNNGG	5 cut(s)	96, 119, 251, 478, 499
Bse118I	RCCGGY	2 cut(s)	49, 191
Bse1I	ACTGG	2 cut(s)	442, 784
Bse3DI	GCAATG	1 cut(s)	636
BseBI	CCWGG	1 cut(s)	647
BseDI	CCNNGG	3 cut(s)	183, 498, 771
BseLI	CCNNNNNNNGG	5 cut(s)	96, 119, 251, 478, 499
BseMI	GCAATG	1 cut(s)	636
BseMII	CTCAG	2 cut(s)	168, 480
BseNI	ACTGG	2 cut(s)	442, 784
BseRI	GAGGAG	2 cut(s)	365, 1059
BseSI	GKGCMC	3 cut(s)	158, 841, 1328
BseX3I	CGGCCG	1 cut(s)	121
BseXI	GCAGC	2 cut(s)	33, 1222
BseYI	CCCAGC	2 cut(s)	157, 161
BsgI	GTGCAG	1 cut(s)	1229
Bsh1285I	CGRYCG	4 cut(s)	124, 310, 504, 1026
BshNI	GGYRCC	1 cut(s)	584
BsiEI	CGRYCG	4 cut(s)	124, 310, 504, 1026
BsiHKAI	GWGCWC	2 cut(s)	417, 794
BsiHKCI	CYCGRG	1 cut(s)	485
BsiSI	CCGG	5 cut(s)	50, 124, 192, 618, 665
BsiWI	CGTACG	1 cut(s)	513
BslFI	GGGAC	2 cut(s)	476, 790
BslI	CCNNNNNNNGG	5 cut(s)	96, 119, 251, 478, 499
BsmAI	GTCTC	2 cut(s)	35, 615
BsmFI	GGGAC	2 cut(s)	476, 790
BsoBI	CYCGRG	1 cut(s)	485
Bsp119I	TTCGAA	1 cut(s)	344
Bsp120I	GGGCCC	2 cut(s)	154, 837
Bsp1286I	GDGCHC	5 cut(s)	158, 417, 794, 841, 1328
Bsp1407I	TGTACA	1 cut(s)	1236
Bsp143I	GATC	9 cut(s)	144, 258, 330, 481, 519, 570, 691, 867, 1023
BspCNI	CTCAG	2 cut(s)	169, 479
BspLI	GGNNCC	6 cut(s)	156, 166, 454, 492, 586, 839
BspPI	GGATC	3 cut(s)	253, 338, 489
BspT104I	TTCGAA	1 cut(s)	344
BspT107I	GGYRCC	1 cut(s)	584
BsrBI	CCGCTC	5 cut(s)	41, 63, 152, 220, 225
BsrDI	GCAATG	1 cut(s)	636
BsrFI	RCCGGY	2 cut(s)	49, 191
BsrGI	TGTACA	1 cut(s)	1236
BsrI	ACTGG	2 cut(s)	442, 784
BssAI	RCCGGY	2 cut(s)	49, 191
BssECI	CCNNGG	3 cut(s)	183, 498, 771
BssMI	GATC	9 cut(s)	144, 258, 330, 481, 519, 570, 691, 867, 1023
BssNI	GRCGYC	3 cut(s)	564, 585, 1034
BssSI	CACGAG	1 cut(s)	383
BssT1I	CCWWGG	1 cut(s)	183
Bst2BI	CACGAG	1 cut(s)	383
Bst2UI	CCWGG	1 cut(s)	647
Bst4CI	ACNGT	1 cut(s)	787
Bst6I	CTCTTC	1 cut(s)	1070
BstACI	GRCGYC	3 cut(s)	564, 585, 1034
BstAPI	GCANNNNNTGC	2 cut(s)	789, 1011
BstAUI	TGTACA	1 cut(s)	1236
BstBAI	YACGTR	4 cut(s)	517, 709, 766, 1207
BstBI	TTCGAA	1 cut(s)	344
BstC8I	GCNNGC	5 cut(s)	51, 154, 272, 555, 631
BstDEI	CTNAG	3 cut(s)	177, 466, 1275
BstDSI	CCRYGG	1 cut(s)	771
BstH2I	RGCGCY	1 cut(s)	588
BstHHI	GCGC	5 cut(s)	440, 450, 511, 587, 635
BstKTI	GATC	9 cut(s)	147, 261, 333, 484, 522, 573, 694, 870, 1026
BstMAI	GTCTC	2 cut(s)	35, 615
BstMBI	GATC	9 cut(s)	144, 258, 330, 481, 519, 570, 691, 867, 1023
BstMCI	CGRYCG	4 cut(s)	124, 310, 504, 1026
BstNI	CCWGG	1 cut(s)	647
BstNSI	RCATGY	1 cut(s)	274
BstSCI	CCNGG	2 cut(s)	645, 663
BstSLI	GKGCMC	3 cut(s)	158, 841, 1328
BstV1I	GCAGC	2 cut(s)	33, 1222
BstX2I	RGATCY	3 cut(s)	330, 481, 691
BstYI	RGATCY	3 cut(s)	330, 481, 691
BstZI	CGGCCG	1 cut(s)	121
BtgI	CCRYGG	1 cut(s)	771
BtgZI	GCGATG	1 cut(s)	376
BtrI	CACGTC	1 cut(s)	721
Cac8I	GCNNGC	5 cut(s)	51, 154, 272, 555, 631
CfoI	GCGC	5 cut(s)	440, 450, 511, 587, 635
Cfr10I	RCCGGY	2 cut(s)	49, 191
Cfr13I	GGNCC	9 cut(s)	99, 154, 155, 165, 227, 490, 837, 838, 880
CpoI	CGGWCCG	1 cut(s)	227
CseI	GACGC	4 cut(s)	515, 933, 1023, 1172
Csp6I	GTAC	5 cut(s)	514, 706, 1108, 1204, 1237
CspI	CGGWCCG	1 cut(s)	227
CviAII	CATG	5 cut(s)	211, 246, 271, 325, 397
CviQI	GTAC	5 cut(s)	514, 706, 1108, 1204, 1237
DdeI	CTNAG	3 cut(s)	177, 466, 1275
DinI	GGCGCC	1 cut(s)	586
DpnI	GATC	9 cut(s)	146, 260, 332, 483, 521, 572, 693, 869, 1025
DpnII	GATC	9 cut(s)	144, 258, 330, 481, 519, 570, 691, 867, 1023
DraIII	CACNNNGTG	1 cut(s)	789
DrdI	GACNNNNNNGTC	1 cut(s)	314
DriI	GACNNNNNGTC	1 cut(s)	27
DseDI	GACNNNNNNGTC	1 cut(s)	314
EaeI	YGGCCR	5 cut(s)	3, 51, 121, 186, 768
EagI	CGGCCG	1 cut(s)	121
Eam1104I	CTCTTC	1 cut(s)	1070
Eam1105I	GACNNNNNGTC	1 cut(s)	27
EarI	CTCTTC	1 cut(s)	1070
EciI	GGCGGA	5 cut(s)	210, 267, 392, 548, 593
EclXI	CGGCCG	1 cut(s)	121
Eco130I	CCWWGG	1 cut(s)	183
Eco147I	AGGCCT	2 cut(s)	182, 471
Eco24I	GRGCYC	2 cut(s)	158, 841
Eco47I	GGWCC	4 cut(s)	99, 165, 227, 490
Eco52I	CGGCCG	1 cut(s)	121
Eco72I	CACGTG	1 cut(s)	766
Eco88I	CYCGRG	1 cut(s)	485
EcoO109I	RGGNCCY	3 cut(s)	165, 490, 837
EcoRII	CCWGG	1 cut(s)	645
EcoT14I	CCWWGG	1 cut(s)	183
EcoT38I	GRGCYC	2 cut(s)	158, 841
EgeI	GGCGCC	1 cut(s)	586
EheI	GGCGCC	1 cut(s)	586
ErhI	CCWWGG	1 cut(s)	183
FaeI	CATG	5 cut(s)	214, 249, 274, 328, 400
FaiI	YATR	7 cut(s)	212, 247, 272, 326, 398, 957, 985
FaqI	GGGAC	2 cut(s)	476, 790
FatI	CATG	5 cut(s)	210, 245, 270, 324, 396
FauI	CCCGC	4 cut(s)	68, 145, 443, 537
FbaI	TGATCA	2 cut(s)	519, 867
FblI	GTMKAC	1 cut(s)	504
FriOI	GRGCYC	2 cut(s)	158, 841
FspBI	CTAG	2 cut(s)	96, 834
GlaI	GCGC	5 cut(s)	439, 449, 510, 586, 634
GsaI	CCCAGC	2 cut(s)	161, 165
HaeII	RGCGCY	1 cut(s)	588
HapII	CCGG	5 cut(s)	50, 124, 192, 618, 665
HgaI	GACGC	4 cut(s)	515, 933, 1023, 1172
HhaI	GCGC	5 cut(s)	440, 450, 511, 587, 635
Hin1I	GRCGYC	3 cut(s)	564, 585, 1034
Hin1II	CATG	5 cut(s)	214, 249, 274, 328, 400
Hin6I	GCGC	5 cut(s)	438, 448, 509, 585, 633
HinP1I	GCGC	5 cut(s)	438, 448, 509, 585, 633
HincII	GTYRAC	1 cut(s)	505
HindII	GTYRAC	1 cut(s)	505
HinfI	GANTC	5 cut(s)	28, 346, 419, 548, 597
HpaII	CCGG	5 cut(s)	50, 124, 192, 618, 665
HphI	GGTGA	2 cut(s)	61, 1318
Hpy166II	GTNNAC	4 cut(s)	90, 234, 505, 562
Hpy188I	TCNGA	5 cut(s)	77, 134, 149, 888, 1039
Hpy188III	TCNNGA	3 cut(s)	485, 568, 1027
Hpy8I	GTNNAC	4 cut(s)	90, 234, 505, 562
Hpy99I	CGWCG	7 cut(s)	122, 359, 509, 569, 722, 1166, 1202
HpyAV	CCTTC	4 cut(s)	351, 1024, 1034, 1058
HpyCH4III	ACNGT	1 cut(s)	787
HpyCH4IV	ACGT	8 cut(s)	516, 564, 708, 720, 765, 1118, 1206, 1220
HpyCH4V	TGCA	3 cut(s)	270, 1141, 1210
HpyF3I	CTNAG	3 cut(s)	177, 466, 1275
HpySE526I	ACGT	8 cut(s)	516, 564, 708, 720, 765, 1118, 1206, 1220
Hsp92I	GRCGYC	3 cut(s)	564, 585, 1034
Hsp92II	CATG	5 cut(s)	214, 249, 274, 328, 400
HspAI	GCGC	5 cut(s)	438, 448, 509, 585, 633
KasI	GGCGCC	1 cut(s)	584
KroI	GCCGGC	1 cut(s)	49
KroNI	GCCGGC	1 cut(s)	51
Ksp22I	TGATCA	2 cut(s)	519, 867
Kzo9I	GATC	9 cut(s)	144, 258, 330, 481, 519, 570, 691, 867, 1023
LmnI	GCTCC	9 cut(s)	46, 135, 149, 222, 254, 405, 452, 797, 1158
Lsp1109I	GCAGC	2 cut(s)	33, 1222
LweI	GCATC	3 cut(s)	68, 934, 1261
MaeI	CTAG	2 cut(s)	96, 834
MaeII	ACGT	8 cut(s)	516, 564, 708, 720, 765, 1118, 1206, 1220
MaeIII	GTNAC	5 cut(s)	316, 475, 958, 1229, 1313
MalI	GATC	9 cut(s)	146, 260, 332, 483, 521, 572, 693, 869, 1025
MbiI	CCGCTC	5 cut(s)	41, 63, 152, 220, 225
MboI	GATC	9 cut(s)	144, 258, 330, 481, 519, 570, 691, 867, 1023
MboII	GAAGA	2 cut(s)	325, 1087
MflI	RGATCY	3 cut(s)	330, 481, 691
MhlI	GDGCHC	5 cut(s)	158, 417, 794, 841, 1328
MlsI	TGGCCA	2 cut(s)	5, 188
MluCI	AATT	1 cut(s)	825
MluI	ACGCGT	4 cut(s)	627, 738, 913, 925
MluNI	TGGCCA	2 cut(s)	5, 188
Mly113I	GGCGCC	1 cut(s)	585
MlyI	GAGTC	4 cut(s)	37, 413, 557, 606
Mox20I	TGGCCA	2 cut(s)	5, 188
MroNI	GCCGGC	1 cut(s)	49
MscI	TGGCCA	2 cut(s)	5, 188
MseI	TTAA	3 cut(s)	83, 657, 807
MslI	CAYNNNNRTG	3 cut(s)	323, 395, 1331
Msp20I	TGGCCA	2 cut(s)	5, 188
MspA1I	CMGCKG	5 cut(s)	46, 161, 176, 855, 1213
MspI	CCGG	5 cut(s)	50, 124, 192, 618, 665
MspR9I	CCNGG	2 cut(s)	647, 665
MvaI	CCWGG	1 cut(s)	647
NaeI	GCCGGC	1 cut(s)	51
NarI	GGCGCC	1 cut(s)	585
NciI	CCSGG	1 cut(s)	665
NdeII	GATC	9 cut(s)	144, 258, 330, 481, 519, 570, 691, 867, 1023
NgoMIV	GCCGGC	1 cut(s)	49
NlaIII	CATG	5 cut(s)	214, 249, 274, 328, 400
NlaIV	GGNNCC	6 cut(s)	156, 166, 454, 492, 586, 839
NmeAIII	GCCGAG	2 cut(s)	620, 724
NmuCI	GTSAC	3 cut(s)	316, 475, 958
NspI	RCATGY	1 cut(s)	274
NspV	TTCGAA	1 cut(s)	344
PaeI	GCATGC	1 cut(s)	274
PaeR7I	CTCGAG	1 cut(s)	485
PceI	AGGCCT	2 cut(s)	182, 471
PcsI	WCGNNNNNNNCGW	3 cut(s)	513, 714, 726
PdiI	GCCGGC	1 cut(s)	51
PfeI	GAWTC	1 cut(s)	346
Pfl23II	CGTACG	1 cut(s)	513
PfoI	TCCNGGA	2 cut(s)	645, 663
Ple19I	CGATCG	1 cut(s)	1026
PleI	GAGTC	4 cut(s)	36, 413, 556, 605
PluTI	GGCGCC	1 cut(s)	588
PmaCI	CACGTG	1 cut(s)	766
PmlI	CACGTG	1 cut(s)	766
PpsI	GAGTC	4 cut(s)	36, 413, 556, 605
Ppu21I	YACGTR	4 cut(s)	517, 709, 766, 1207
PpuMI	RGGWCCY	2 cut(s)	165, 490
Psp1406I	AACGTT	1 cut(s)	1118
Psp5II	RGGWCCY	2 cut(s)	165, 490
Psp6I	CCWGG	1 cut(s)	645
PspCI	CACGTG	1 cut(s)	766
PspFI	CCCAGC	2 cut(s)	157, 161
PspGI	CCWGG	1 cut(s)	645
PspLI	CGTACG	1 cut(s)	513
PspN4I	GGNNCC	6 cut(s)	156, 166, 454, 492, 586, 839
PspOMI	GGGCCC	2 cut(s)	154, 837
PspPI	GGNCC	9 cut(s)	99, 154, 155, 165, 227, 490, 837, 838, 880
PspPPI	RGGWCCY	2 cut(s)	165, 490
PsuI	RGATCY	3 cut(s)	330, 481, 691
PvuI	CGATCG	1 cut(s)	1026
PvuII	CAGCTG	1 cut(s)	161
RsaI	GTAC	5 cut(s)	515, 707, 1109, 1205, 1238
RsaNI	GTAC	5 cut(s)	514, 706, 1108, 1204, 1237
RseI	CAYNNNNRTG	3 cut(s)	323, 395, 1331
Rsr2I	CGGWCCG	1 cut(s)	227
RsrII	CGGWCCG	1 cut(s)	227
SalI	GTCGAC	1 cut(s)	503
SaqAI	TTAA	3 cut(s)	83, 657, 807
Sau3AI	GATC	9 cut(s)	144, 258, 330, 481, 519, 570, 691, 867, 1023
Sau96I	GGNCC	9 cut(s)	99, 154, 155, 165, 227, 490, 837, 838, 880
SchI	GAGTC	4 cut(s)	37, 413, 557, 606
ScrFI	CCNGG	2 cut(s)	647, 665
SduI	GDGCHC	5 cut(s)	158, 417, 794, 841, 1328
SfaNI	GCATC	3 cut(s)	68, 934, 1261
SfoI	GGCGCC	1 cut(s)	586
Sfr274I	CTCGAG	1 cut(s)	485
SfuI	TTCGAA	1 cut(s)	344
SgrAI	CRCCGGYG	1 cut(s)	191
SinI	GGWCC	4 cut(s)	99, 165, 227, 490
SlaI	CTCGAG	1 cut(s)	485
SmiMI	CAYNNNNRTG	3 cut(s)	323, 395, 1331
SmlI	CTYRAG	3 cut(s)	15, 25, 485
SmoI	CTYRAG	3 cut(s)	15, 25, 485
SphI	GCATGC	1 cut(s)	274
Sse9I	AATT	1 cut(s)	825
SseBI	AGGCCT	2 cut(s)	182, 471
SspDI	GGCGCC	1 cut(s)	584
SspMI	CTAG	2 cut(s)	96, 834
StuI	AGGCCT	2 cut(s)	182, 471
StyD4I	CCNGG	2 cut(s)	645, 663
StyI	CCWWGG	1 cut(s)	183
TaaI	ACNGT	1 cut(s)	787
TaiI	ACGT	8 cut(s)	519, 567, 711, 723, 768, 1121, 1209, 1223
TaqI	TCGA	8 cut(s)	216, 285, 306, 344, 357, 417, 486, 504
TaqII	GACCGA	1 cut(s)	490
TasI	AATT	1 cut(s)	825
TatI	WGTACW	2 cut(s)	1107, 1236
TfiI	GAWTC	1 cut(s)	346
Tru1I	TTAA	3 cut(s)	83, 657, 807
Tru9I	TTAA	3 cut(s)	83, 657, 807
TseFI	GTSAC	3 cut(s)	316, 475, 958
TseI	GCWGC	2 cut(s)	46, 1210
Tsp45I	GTSAC	3 cut(s)	316, 475, 958
TspDTI	ATGAA	2 cut(s)	199, 379
TspGWI	ACGGA	2 cut(s)	219, 494
VpaK11BI	GGWCC	4 cut(s)	99, 165, 227, 490
XceI	RCATGY	1 cut(s)	274
XcmI	CCANNNNNNNNNTGG	2 cut(s)	196, 1300
XhoI	CTCGAG	1 cut(s)	485
XmiI	GTMKAC	1 cut(s)	504
XspI	CTAG	2 cut(s)	96, 834
ZraI	GACGTC	1 cut(s)	565

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.