Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0016913

Physical Location & Seq

Genomic Coordinates Forward (+)

25324125 .. 25326069

Gene Structure 1945 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G011210.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1365 bp

ATGGCCTCAGCCACGCAAGCAGCGACGATCTACGGCGGTCTCTTCACCGCCGCCGCTCCTCTCCAAACAAAGCGTCGGTCTTTCACCTTCAGAATCACAGCCTCATCAAACTCCTCCAACCCACCCTTCGTCGGCCGTAAGCTCCGCGCCGCCGTCATCGGCGCCGGTCCCGCCGGGTCCTCCGCCGCCGAGGCCTTGGCCGCCGGCGGAGCCGAGTGCTTCCTCTTCGAGCGAGCCCCCTCGGAAGCCAAGCCCTGCGGCGGAGCCATCCCTCTCTGCATGCTCGATGAGTTCGACATCCCGGCCCGCCTCATCGACCGCCACGTCACCCGCATGAGGATCTTCTCCCCCTCCAACCTCGCCGTCGACTTCGGCAAGACCCTCCGCCCCCACGAGTTCATCGCCATGCTCCGCCGCGAGGTCCTCGACTCCTTCCTCCGCGACCGCGCCCAGTCCCGCGGCGCCTCCCTCATCTCCGGCCTCGTCACCCGCCTCGAGATCCCCTCCTCCTCCCCCCACGCGCCCTACGTCGTCCACTACACCAAGGACCACGCGCGCCACTCGCTCGCCGTGGACGTCGTCGTCGGCGCGGACGGCGCCAACAGCCGCGTCGCCAAGTCGATCAGAGCCGGAAGCTACGCCTGCGCCATCGCTTTCCAGGAGAGGATCAAACTCCCAGACGACAAAATGGCCTACTACGAAGACCTTGCCGAAATGTACGTCGGAAACGACGTGTCGCCCGACTTTTACGCCTGGGTCTTTCCCAAATGCGACCACGTGGCAGTGGGCACCGGCACTGTGTGCTCCAAGCAGGACATCAAGGTCTTCCAAAGGGCCATCAGGGCCAGAGCCAATGCCAAGATCAGCGGTGGCAGAGTCATCAAGGTGGAGGCCCACCCGATACCTGAGCACCCCCGCCCCACGCGCGTGAGGGGGCGCGTGGCGCTAATTGGCGACGCCGCCGGGTACGTGACAAAGTGTTCCGGCGAGGGGATCTACTTTGCGGCGAAATCGGGGAGAATGTGCGGCGAGGCAATAATAAAGGCGTCGGAGGGAGGGGAGAGGATGATCAATGAGGAGGATTTGAAGAGGGAGTATTTGAAAGAGTGGGATGCCAAGTACATTACGACGTTTAGGTTCTTGGACTTGTTGCAGAAGGTGTTTTATGGCAGTGATGCGGCTAGAGAAGCTTTGGTGGAGCTGTGTGGGGATGAGTATGTGCAGCGCATGACGTTCGAGAGTTACTTGTACAAGAAGTTAGCCGATGGGAATAGGTGGGATGATGCTAAGATGGTTTTGAATACCGTTGGGAGTTTGATGAGATGTAACGTTTTGGGGAGGAAAATGGAGGCTTTGAAGATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006629 GO:0006644 GO:0006720 GO:0006721 GO:0006725 GO:0006766 GO:0006775 GO:0006778 GO:0006779 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0008654 GO:0009058 GO:0009110 GO:0009987 GO:0010189 GO:0015994 GO:0015995 GO:0016114 GO:0016491 GO:0018130 GO:0019438 GO:0019637 GO:0033013 GO:0033014 GO:0033385 GO:0033519 GO:0033521 GO:0034641 GO:0042360 GO:0042362 GO:0042440 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044271 GO:0044281 GO:0044283 GO:0045550 GO:0046148 GO:0046483 GO:0051186 GO:0051188 GO:0055114 GO:0071704 GO:0090407 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00860 ko00900 ko01100 ko01110 map00860 map00900 map01100 map01110

Pfam Domains

Protein Families

FAD_binding_3

Protein Analysis

454

Amino Acids

49.8

Weight (kDa)

9.15

Isoelectric Point (pI)

37.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_3	PF01494	49 - 337	4.5e-09	FAD binding domain
GGR_cat	PF22578	232 - 274	1.5e-06	Geranylgeranyl reductase catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016913)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g06120
malus_domestica	MD00G1178300.v1.1
prunus_persica	Prupe.6G153000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0333811
rosa_laevigata	RLG00000029529
rosa_multiflora	Rmu_sc0000026.1_g000018 Rmu_sc0007177.1_g000004
rosa_roxburghii	Rroxscaffold_4G00317220
rosa_rugosa	Rorug01G0112000
rosa_samantha	Rh1AG134400 Rh1BG102900 Rh1CG128000 Rh1DG139900
rosa_wichuraiana	Rw1G011210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	323, 581, 821
AatII	GACGTC	1 cut(s)	579
AccB1I	GGYRCC	4 cut(s)	161, 461, 596, 788
AccBSI	CCGCTC	1 cut(s)	56
AccI	GTMKAC	1 cut(s)	366
AclI	AACGTT	1 cut(s)	1329
AclWI	GGATC	4 cut(s)	347, 493, 674, 1001
AcoI	YGGCCR	2 cut(s)	133, 198
AcuI	CTGAAG	1 cut(s)	73
AcvI	CACGTG	1 cut(s)	778
AcyI	GRCGYC	6 cut(s)	162, 462, 576, 597, 957, 1046
AdeI	CACNNNGTG	1 cut(s)	801
AfaI	GTAC	4 cut(s)	719, 968, 1121, 1250
AfiI	CCNNNNNNNGG	5 cut(s)	131, 260, 336, 418, 990
AflIII	ACRYGT	1 cut(s)	732
AgsI	TTSAA	4 cut(s)	1087, 1102, 1300, 1357
AjiI	CACGTC	2 cut(s)	325, 733
AjnI	CCWGG	2 cut(s)	657, 752
AjuI	GAANNNNNNNTTGG	2 cut(s)	110, 142
AleI	CACNNNNGTG	1 cut(s)	926
AluBI	AGCT	4 cut(s)	142, 636, 1190, 1201
AluI	AGCT	4 cut(s)	142, 636, 1190, 1201
Alw21I	GWGCWC	2 cut(s)	806, 912
Alw26I	GTCTC	1 cut(s)	44
AlwI	GGATC	4 cut(s)	347, 493, 674, 1001
Ama87I	CYCGRG	1 cut(s)	494
ApeKI	GCWGC	2 cut(s)	20, 1222
ArsI	GACNNNNNNTTYG	6 cut(s)	58, 62, 90, 94, 705, 737
AspS9I	GGNCC	8 cut(s)	167, 177, 304, 421, 547, 834, 843, 892
AsuC2I	CCSGG	3 cut(s)	175, 302, 964
AsuHPI	GGTGA	4 cut(s)	37, 76, 319, 478
AvaI	CYCGRG	1 cut(s)	494
AvaII	GGWCC	4 cut(s)	167, 177, 421, 547
BaeGI	GKGCMC	1 cut(s)	791
BanI	GGYRCC	4 cut(s)	161, 461, 596, 788
BanII	GRGCYC	1 cut(s)	238
BauI	CACGAG	1 cut(s)	392
BbrPI	CACGTG	1 cut(s)	778
BbsI	GAAGAC	2 cut(s)	708, 817
Bbv12I	GWGCWC	2 cut(s)	806, 912
BbvCI	CCTCAGC	1 cut(s)	7
BbvI	GCAGC	2 cut(s)	32, 1234
BccI	CCATC	5 cut(s)	275, 656, 845, 1259, 1285
BceAI	ACGGC	6 cut(s)	49, 120, 137, 347, 554, 610
BcgI	CGANNNNNNTGC	4 cut(s)	689, 723, 1216, 1250
BciT130I	CCWGG	2 cut(s)	659, 754
BclI	TGATCA	1 cut(s)	1068
BcnI	CCSGG	3 cut(s)	175, 302, 964
BcoDI	GTCTC	1 cut(s)	44
BfaI	CTAG	1 cut(s)	1182
BfoI	RGCGCY	4 cut(s)	165, 465, 600, 947
BglI	GCCNNNNNGGC	2 cut(s)	191, 842
Bme1390I	CCNGG	5 cut(s)	175, 302, 659, 754, 964
Bme18I	GGWCC	4 cut(s)	167, 177, 421, 547
BmeT110I	CYCGRG	1 cut(s)	494
BmgBI	CACGTC	2 cut(s)	325, 733
BmgT120I	GGNCC	8 cut(s)	167, 177, 304, 421, 547, 834, 843, 892
BmiI	GGNNCC	8 cut(s)	163, 169, 178, 211, 265, 463, 598, 790
BmrFI	CCNGG	5 cut(s)	175, 302, 659, 754, 964
BmrI	ACTGGG	1 cut(s)	445
BmsI	GCATC	3 cut(s)	1102, 1165, 1273
BmuI	ACTGGG	1 cut(s)	445
BpiI	GAAGAC	2 cut(s)	708, 817
BplI	GAGNNNNNCTC	2 cut(s)	488, 520
Bpu10I	CCTNAGC	2 cut(s)	7, 906
BpuMI	CCSGG	3 cut(s)	175, 302, 964
BsaAI	YACGTR	2 cut(s)	778, 970
BsaHI	GRCGYC	6 cut(s)	162, 462, 576, 597, 957, 1046
BsaI	GGTCTC	1 cut(s)	44
BsaJI	CCNNGG	7 cut(s)	189, 195, 240, 457, 543, 570, 753
Bsc4I	CCNNNNNNNGG	5 cut(s)	131, 260, 336, 418, 990
Bse118I	RCCGGY	3 cut(s)	164, 203, 791
Bse1I	ACTGG	1 cut(s)	451
BseBI	CCWGG	2 cut(s)	659, 754
BseDI	CCNNGG	7 cut(s)	189, 195, 240, 457, 543, 570, 753
BseGI	GGATG	6 cut(s)	267, 297, 1071, 1117, 1216, 1285
BseLI	CCNNNNNNNGG	5 cut(s)	131, 260, 336, 418, 990
BseMII	CTCAG	2 cut(s)	21, 897
BseNI	ACTGG	1 cut(s)	451
BsePI	GCGCGC	1 cut(s)	554
BseRI	GAGGAG	5 cut(s)	48, 103, 496, 499, 1091
BseSI	GKGCMC	1 cut(s)	791
BseX3I	CGGCCG	1 cut(s)	133
BseXI	GCAGC	2 cut(s)	32, 1234
BsgI	GTGCAG	1 cut(s)	1241
Bsh1285I	CGRYCG	3 cut(s)	136, 319, 445
BshNI	GGYRCC	4 cut(s)	161, 461, 596, 788
BsiEI	CGRYCG	3 cut(s)	136, 319, 445
BsiHKAI	GWGCWC	2 cut(s)	806, 912
BsiHKCI	CYCGRG	1 cut(s)	494
BsiSI	CCGG	9 cut(s)	165, 174, 204, 302, 477, 630, 792, 963, 984
BslFI	GGGAC	2 cut(s)	153, 439
BslI	CCNNNNNNNGG	5 cut(s)	131, 260, 336, 418, 990
BsmAI	GTCTC	1 cut(s)	44
BsmFI	GGGAC	2 cut(s)	153, 439
Bso31I	GGTCTC	1 cut(s)	44
BsoBI	CYCGRG	1 cut(s)	494
Bsp1286I	GDGCHC	4 cut(s)	238, 791, 806, 912
Bsp1407I	TGTACA	1 cut(s)	1248
Bsp143I	GATC	8 cut(s)	27, 339, 498, 621, 666, 861, 993, 1068
BspCNI	CTCAG	2 cut(s)	20, 898
BspLI	GGNNCC	8 cut(s)	163, 169, 178, 211, 265, 463, 598, 790
BspPI	GGATC	4 cut(s)	347, 493, 674, 1001
BspT107I	GGYRCC	4 cut(s)	161, 461, 596, 788
BspTNI	GGTCTC	1 cut(s)	44
BsrBI	CCGCTC	1 cut(s)	56
BsrFI	RCCGGY	3 cut(s)	164, 203, 791
BsrGI	TGTACA	1 cut(s)	1248
BsrI	ACTGG	1 cut(s)	451
BssAI	RCCGGY	3 cut(s)	164, 203, 791
BssECI	CCNNGG	7 cut(s)	189, 195, 240, 457, 543, 570, 753
BssHII	GCGCGC	1 cut(s)	554
BssMI	GATC	8 cut(s)	27, 339, 498, 621, 666, 861, 993, 1068
BssNI	GRCGYC	6 cut(s)	162, 462, 576, 597, 957, 1046
BssSI	CACGAG	1 cut(s)	392
BssT1I	CCWWGG	2 cut(s)	195, 543
Bst2BI	CACGAG	1 cut(s)	392
Bst2UI	CCWGG	2 cut(s)	659, 754
Bst4CI	ACNGT	2 cut(s)	799, 1306
Bst6I	CTCTTC	3 cut(s)	47, 230, 1082
BstACI	GRCGYC	6 cut(s)	162, 462, 576, 597, 957, 1046
BstAPI	GCANNNNNTGC	1 cut(s)	801
BstAUI	TGTACA	1 cut(s)	1248
BstBAI	YACGTR	2 cut(s)	778, 970
BstC8I	GCNNGC	8 cut(s)	18, 205, 234, 281, 307, 556, 567, 643
BstDEI	CTNAG	3 cut(s)	7, 906, 1287
BstDSI	CCRYGG	2 cut(s)	457, 570
BstF5I	GGATG	6 cut(s)	267, 297, 1071, 1117, 1216, 1285
BstH2I	RGCGCY	4 cut(s)	165, 465, 600, 947
BstKTI	GATC	8 cut(s)	30, 342, 501, 624, 669, 864, 996, 1071
BstMAI	GTCTC	1 cut(s)	44
BstMBI	GATC	8 cut(s)	27, 339, 498, 621, 666, 861, 993, 1068
BstMCI	CGRYCG	3 cut(s)	136, 319, 445
BstNI	CCWGG	2 cut(s)	659, 754
BstNSI	RCATGY	1 cut(s)	283
BstSCI	CCNGG	5 cut(s)	173, 300, 657, 752, 962
BstSLI	GKGCMC	1 cut(s)	791
BstV1I	GCAGC	2 cut(s)	32, 1234
BstV2I	GAAGAC	2 cut(s)	708, 817
BstX2I	RGATCY	3 cut(s)	339, 498, 993
BstYI	RGATCY	3 cut(s)	339, 498, 993
BstZI	CGGCCG	1 cut(s)	133
BtgI	CCRYGG	2 cut(s)	457, 570
BtgZI	GCGATG	2 cut(s)	385, 634
BtrI	CACGTC	2 cut(s)	325, 733
BtsCI	GGATG	6 cut(s)	267, 297, 1071, 1117, 1216, 1285
BtsI	GCAGTG	2 cut(s)	789, 1177
BtsIMutI	CAGTG	3 cut(s)	789, 795, 1177
Cac8I	GCNNGC	8 cut(s)	18, 205, 234, 281, 307, 556, 567, 643
Cfr10I	RCCGGY	3 cut(s)	164, 203, 791
Cfr13I	GGNCC	8 cut(s)	167, 177, 304, 421, 547, 834, 843, 892
Cfr42I	CCGCGG	1 cut(s)	460
CseI	GACGC	4 cut(s)	62, 598, 965, 1035
Csp6I	GTAC	4 cut(s)	718, 967, 1120, 1249
CviAII	CATG	4 cut(s)	280, 334, 406, 1228
CviQI	GTAC	4 cut(s)	718, 967, 1120, 1249
DdeI	CTNAG	3 cut(s)	7, 906, 1287
DinI	GGCGCC	3 cut(s)	163, 463, 598
DpnI	GATC	8 cut(s)	29, 341, 500, 623, 668, 863, 995, 1070
DpnII	GATC	8 cut(s)	27, 339, 498, 621, 666, 861, 993, 1068
DraIII	CACNNNGTG	1 cut(s)	801
DrdI	GACNNNNNNGTC	3 cut(s)	323, 581, 821
DseDI	GACNNNNNNGTC	3 cut(s)	323, 581, 821
EaeI	YGGCCR	2 cut(s)	133, 198
EagI	CGGCCG	1 cut(s)	133
Eam1104I	CTCTTC	3 cut(s)	47, 230, 1082
EarI	CTCTTC	3 cut(s)	47, 230, 1082
EciI	GGCGGA	5 cut(s)	172, 222, 276, 374, 401
EclXI	CGGCCG	1 cut(s)	133
Eco130I	CCWWGG	2 cut(s)	195, 543
Eco147I	AGGCCT	1 cut(s)	194
Eco24I	GRGCYC	1 cut(s)	238
Eco31I	GGTCTC	1 cut(s)	44
Eco47I	GGWCC	4 cut(s)	167, 177, 421, 547
Eco52I	CGGCCG	1 cut(s)	133
Eco57I	CTGAAG	1 cut(s)	73
Eco72I	CACGTG	1 cut(s)	778
Eco88I	CYCGRG	1 cut(s)	494
EcoO109I	RGGNCCY	2 cut(s)	177, 421
EcoRII	CCWGG	2 cut(s)	657, 752
EcoT14I	CCWWGG	2 cut(s)	195, 543
EcoT38I	GRGCYC	1 cut(s)	238
EgeI	GGCGCC	3 cut(s)	163, 463, 598
EheI	GGCGCC	3 cut(s)	163, 463, 598
ErhI	CCWWGG	2 cut(s)	195, 543
FaeI	CATG	4 cut(s)	283, 337, 409, 1231
FaiI	YATR	6 cut(s)	281, 335, 407, 1167, 1218, 1229
FaqI	GGGAC	2 cut(s)	153, 439
FatI	CATG	4 cut(s)	279, 333, 405, 1227
FauI	CCCGC	6 cut(s)	178, 314, 338, 464, 497, 923
FbaI	TGATCA	1 cut(s)	1068
FblI	GTMKAC	1 cut(s)	366
FokI	GGATG	6 cut(s)	254, 284, 1078, 1124, 1223, 1292
FriOI	GRGCYC	1 cut(s)	238
FspBI	CTAG	1 cut(s)	1182
HaeII	RGCGCY	4 cut(s)	165, 465, 600, 947
HapII	CCGG	9 cut(s)	165, 174, 204, 302, 477, 630, 792, 963, 984
HgaI	GACGC	4 cut(s)	62, 598, 965, 1035
Hin1I	GRCGYC	6 cut(s)	162, 462, 576, 597, 957, 1046
Hin1II	CATG	4 cut(s)	283, 337, 409, 1231
HincII	GTYRAC	1 cut(s)	367
HindII	GTYRAC	1 cut(s)	367
HindIII	AAGCTT	1 cut(s)	1188
HinfI	GANTC	3 cut(s)	93, 428, 876
HpaII	CCGG	9 cut(s)	165, 174, 204, 302, 477, 630, 792, 963, 984
HphI	GGTGA	4 cut(s)	37, 76, 319, 478
Hpy166II	GTNNAC	3 cut(s)	367, 535, 574
Hpy188I	TCNGA	5 cut(s)	92, 244, 626, 725, 1051
Hpy188III	TCNNGA	2 cut(s)	496, 1237
Hpy8I	GTNNAC	3 cut(s)	367, 535, 574
HpyAV	CCTTC	4 cut(s)	97, 136, 442, 1150
HpyCH4III	ACNGT	2 cut(s)	799, 1306
HpyCH4V	TGCA	3 cut(s)	279, 1153, 1222
HpyF3I	CTNAG	3 cut(s)	7, 906, 1287
Hsp92I	GRCGYC	6 cut(s)	162, 462, 576, 597, 957, 1046
Hsp92II	CATG	4 cut(s)	283, 337, 409, 1231
KasI	GGCGCC	3 cut(s)	161, 461, 596
KroI	GCCGGC	1 cut(s)	203
KroNI	GCCGGC	1 cut(s)	205
Ksp22I	TGATCA	1 cut(s)	1068
KspI	CCGCGG	1 cut(s)	460
Kzo9I	GATC	8 cut(s)	27, 339, 498, 621, 666, 861, 993, 1068
LmnI	GCTCC	7 cut(s)	61, 147, 209, 263, 414, 809, 1198
Lsp1109I	GCAGC	2 cut(s)	32, 1234
LweI	GCATC	3 cut(s)	1102, 1165, 1273
MaeI	CTAG	1 cut(s)	1182
MaeIII	GTNAC	5 cut(s)	325, 484, 970, 1241, 1325
MalI	GATC	8 cut(s)	29, 341, 500, 623, 668, 863, 995, 1070
MbiI	CCGCTC	1 cut(s)	56
MboI	GATC	8 cut(s)	27, 339, 498, 621, 666, 861, 993, 1068
MboII	GAAGA	6 cut(s)	34, 217, 334, 713, 817, 1099
MflI	RGATCY	3 cut(s)	339, 498, 993
MhlI	GDGCHC	4 cut(s)	238, 791, 806, 912
MluCI	AATT	1 cut(s)	948
Mly113I	GGCGCC	3 cut(s)	162, 462, 597
MlyI	GAGTC	2 cut(s)	422, 885
MmeI	TCCRAC	4 cut(s)	141, 378, 703, 1029
MreI	CGCCGGCG	1 cut(s)	203
MroNI	GCCGGC	1 cut(s)	203
MslI	CAYNNNNRTG	4 cut(s)	332, 404, 884, 926
MspA1I	CMGCKG	2 cut(s)	459, 867
MspI	CCGG	9 cut(s)	165, 174, 204, 302, 477, 630, 792, 963, 984
MspR9I	CCNGG	5 cut(s)	175, 302, 659, 754, 964
MvaI	CCWGG	2 cut(s)	659, 754
NaeI	GCCGGC	1 cut(s)	205
NarI	GGCGCC	3 cut(s)	162, 462, 597
NciI	CCSGG	3 cut(s)	175, 302, 964
NdeII	GATC	8 cut(s)	27, 339, 498, 621, 666, 861, 993, 1068
NgoMIV	GCCGGC	1 cut(s)	203
NlaIII	CATG	4 cut(s)	283, 337, 409, 1231
NlaIV	GGNNCC	8 cut(s)	163, 169, 178, 211, 265, 463, 598, 790
NmeAIII	GCCGAG	2 cut(s)	214, 238
NmuCI	GTSAC	3 cut(s)	325, 484, 970
NspI	RCATGY	1 cut(s)	283
OliI	CACNNNNGTG	1 cut(s)	926
PaeI	GCATGC	1 cut(s)	283
PaeR7I	CTCGAG	1 cut(s)	494
PauI	GCGCGC	1 cut(s)	554
PceI	AGGCCT	1 cut(s)	194
PcsI	WCGNNNNNNNCGW	8 cut(s)	20, 291, 321, 525, 573, 726, 729, 738
PdiI	GCCGGC	1 cut(s)	205
PfeI	GAWTC	1 cut(s)	93
PflFI	GACNNNGTC	1 cut(s)	578
PfoI	TCCNGGA	1 cut(s)	657
PleI	GAGTC	2 cut(s)	422, 884
PluTI	GGCGCC	3 cut(s)	165, 465, 600
PmaCI	CACGTG	1 cut(s)	778
PmlI	CACGTG	1 cut(s)	778
PpsI	GAGTC	2 cut(s)	422, 884
Ppu21I	YACGTR	2 cut(s)	778, 970
PpuMI	RGGWCCY	2 cut(s)	177, 421
Psp1406I	AACGTT	1 cut(s)	1329
Psp5II	RGGWCCY	2 cut(s)	177, 421
Psp6I	CCWGG	2 cut(s)	657, 752
PspCI	CACGTG	1 cut(s)	778
PspGI	CCWGG	2 cut(s)	657, 752
PspN4I	GGNNCC	8 cut(s)	163, 169, 178, 211, 265, 463, 598, 790
PspPI	GGNCC	8 cut(s)	167, 177, 304, 421, 547, 834, 843, 892
PspPPI	RGGWCCY	2 cut(s)	177, 421
PsuI	RGATCY	3 cut(s)	339, 498, 993
PsyI	GACNNNGTC	1 cut(s)	578
PteI	GCGCGC	1 cut(s)	554
RsaI	GTAC	4 cut(s)	719, 968, 1121, 1250
RsaNI	GTAC	4 cut(s)	718, 967, 1120, 1249
RseI	CAYNNNNRTG	4 cut(s)	332, 404, 884, 926
SacII	CCGCGG	1 cut(s)	460
SalI	GTCGAC	1 cut(s)	365
Sau3AI	GATC	8 cut(s)	27, 339, 498, 621, 666, 861, 993, 1068
Sau96I	GGNCC	8 cut(s)	167, 177, 304, 421, 547, 834, 843, 892
SchI	GAGTC	2 cut(s)	422, 885
ScrFI	CCNGG	5 cut(s)	175, 302, 659, 754, 964
SduI	GDGCHC	4 cut(s)	238, 791, 806, 912
SfaNI	GCATC	3 cut(s)	1102, 1165, 1273
SfiI	GGCCNNNNNGGCC	1 cut(s)	842
SfoI	GGCGCC	3 cut(s)	163, 463, 598
Sfr274I	CTCGAG	1 cut(s)	494
Sfr303I	CCGCGG	1 cut(s)	460
SgrAI	CRCCGGYG	1 cut(s)	203
SgrBI	CCGCGG	1 cut(s)	460
SinI	GGWCC	4 cut(s)	167, 177, 421, 547
SlaI	CTCGAG	1 cut(s)	494
SmiMI	CAYNNNNRTG	4 cut(s)	332, 404, 884, 926
SmlI	CTYRAG	1 cut(s)	494
SmoI	CTYRAG	1 cut(s)	494
SphI	GCATGC	1 cut(s)	283
Sse9I	AATT	1 cut(s)	948
SseBI	AGGCCT	1 cut(s)	194
SspDI	GGCGCC	3 cut(s)	161, 461, 596
SspMI	CTAG	1 cut(s)	1182
StuI	AGGCCT	1 cut(s)	194
StyD4I	CCNGG	5 cut(s)	173, 300, 657, 752, 962
StyI	CCWWGG	2 cut(s)	195, 543
TaaI	ACNGT	2 cut(s)	799, 1306
TaqI	TCGA	9 cut(s)	228, 285, 294, 315, 366, 426, 495, 620, 1236
TaqII	GACCGA	1 cut(s)	66
TasI	AATT	1 cut(s)	948
TatI	WGTACW	2 cut(s)	1119, 1248
TfiI	GAWTC	1 cut(s)	93
TscAI	CASTG	3 cut(s)	789, 802, 1177
TseFI	GTSAC	3 cut(s)	325, 484, 970
TseI	GCWGC	2 cut(s)	20, 1222
Tsp45I	GTSAC	3 cut(s)	325, 484, 970
TspDTI	ATGAA	1 cut(s)	388
TspRI	CASTG	3 cut(s)	789, 802, 1177
Tth111I	GACNNNGTC	1 cut(s)	578
VpaK11BI	GGWCC	4 cut(s)	167, 177, 421, 547
XceI	RCATGY	1 cut(s)	283
XhoI	CTCGAG	1 cut(s)	494
XmiI	GTMKAC	1 cut(s)	366
XspI	CTAG	1 cut(s)	1182
ZraI	GACGTC	1 cut(s)	577

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.