Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0016913

Physical Location & Seq

Genomic Coordinates Reverse (-)

39900296 .. 39901663

Gene Structure 1368 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000029529

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1368 bp

ATGGCCTCAGCCACGCAAGCAGCGACGATCTACGGCGGTCTCTTAACCGCCGCCGCTCCTCTCCAAACAAAGCGTCGGTCTTTCACCTGCAGAATCACAGCCTCATCAAACTCCTCCAACCCACCCTTCGTCGGCCGTAAGCTCCGCGCCGCCGTCATCGGCGCCGGTCCCGCCGGGTCCTCCGCCGCCGAGGCCTTGGCCGCCGGCGGAGCCGAGTGCTTCCTCTTCGAGCGAGCCCCCTCGGAAGCCAAGCCCTGCGGCGGAGCCATCCCTCTCTGCATGCTCGACGAGTTCGACATCCCGGCCCGCCTCATCGACCGCCACGTCACCCGCATGAGGATCTTCTCCCCCTCCAACCTCGCCGTCGACTTCGGCAAGACCCTCCGCCCCCACGAGTTCATCGCCATGCTCCGCCGCGAGGTCCTCGACTCCTTCCTCCGCGACCGCGCCCAGTCCCGCGGCGCCTCCCTCATCTCCGGCCTCGTCACCCGCCTCGAGATCCCCGCCTCCTCCTCCCCACACGCGCCCTACGTCGTCCACTACACCAAGGACCACGCGCGCCACGCGCTCGCCGTGGACGTCGTCGTCGGCGCAGACGGCGCCAACAGCCGCGTCGCCAAGTCGATCAACGCCGGAAGCTACGCCTGCGCCATCGCTTTCCAGGAGAGGATCAAACTCCCAGACGACAAAATGGCCTACTACGAAGACCTCGCCGAAATGTACGTCGGAAACGACGTGTCGCCCGACTTTTACGCCTGGGTCTTCCCCAAATGCGACCACGTGGCAGTGGGCACCGGCACTGTGTGCTCCAAGCAGGACATCAAGGTCTTCCAAAGGGCCATCAGGGCCAGAGCCAATGCCAAGATCAGCGGTGGCAGAGTCATCAAGGTGGAGGCCCACCCGATACCCGAGCACCCCCGCCCCACGCGCGTGAGGGGGCGCGTGGCGCTAATTGGCGACGCCGCCGGGTACGTGACGAAATGTTCCGGCGAGGGGATTTACTTTGCGGCGAAATCGGGGAGAATGTGCGGTGAGGCGATAATAAAGGCGTCGGAGGGAGGGGAGAGGATGATAAATGAGGAGGATTTGAAGAGGGAGTATTTGAAAGAGTGGGATGCTAAGTACATTACGACGTTTAGGTTCTTGGACTTGTTGCAGAAGGTGTTTTATGGTAGTGATGCGGCTAGAGAAGCTTTGGTGGAGCTGTGTGGGGATGAGTATGTGCAGCGCATGACATTCGAGAGTTACTTGTACAAGAAGTTAGCTGATGGGAATAGGTGGGATGATGCTAAGATGGTTTTGAATACCGTTGGGAGTTTGATGAGGTGTAGCATTTTGGGGAGGAAAATGGAGGCTTTGAAGATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006629 GO:0006644 GO:0006720 GO:0006721 GO:0006725 GO:0006766 GO:0006775 GO:0006778 GO:0006779 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0008654 GO:0009058 GO:0009110 GO:0009987 GO:0010189 GO:0015994 GO:0015995 GO:0016114 GO:0016491 GO:0018130 GO:0019438 GO:0019637 GO:0033013 GO:0033014 GO:0033385 GO:0033519 GO:0033521 GO:0034641 GO:0042360 GO:0042362 GO:0042440 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044271 GO:0044281 GO:0044283 GO:0045550 GO:0046148 GO:0046483 GO:0051186 GO:0051188 GO:0055114 GO:0071704 GO:0090407 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00860 ko00900 ko01100 ko01110 map00860 map00900 map01100 map01110

Pfam Domains

Protein Families

FAD_binding_3

Protein Analysis

456

Amino Acids

49.72

Weight (kDa)

9.05

Isoelectric Point (pI)

37.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_3	PF01494	49 - 338	3.9e-09	FAD binding domain
GGR_cat	PF22578	233 - 275	1.5e-06	Geranylgeranyl reductase catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016913)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g06120
malus_domestica	MD00G1178300.v1.1
prunus_persica	Prupe.6G153000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0333811
rosa_laevigata	RLG00000029529
rosa_multiflora	Rmu_sc0000026.1_g000018 Rmu_sc0007177.1_g000004
rosa_roxburghii	Rroxscaffold_4G00317220
rosa_rugosa	Rorug01G0112000
rosa_samantha	Rh1AG134400 Rh1BG102900 Rh1CG128000 Rh1DG139900
rosa_wichuraiana	Rw1G011210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	95
AasI	GACNNNNNNGTC	3 cut(s)	323, 584, 824
AatII	GACGTC	1 cut(s)	582
Acc36I	ACCTGC	1 cut(s)	95
AccB1I	GGYRCC	4 cut(s)	161, 461, 599, 791
AccBSI	CCGCTC	1 cut(s)	56
AccI	GTMKAC	1 cut(s)	366
AclWI	GGATC	3 cut(s)	347, 493, 677
AcoI	YGGCCR	2 cut(s)	133, 198
AcvI	CACGTG	1 cut(s)	781
AcyI	GRCGYC	6 cut(s)	162, 462, 579, 600, 960, 1049
AdeI	CACNNNGTG	1 cut(s)	804
AfaI	GTAC	4 cut(s)	722, 971, 1124, 1253
AfiI	CCNNNNNNNGG	5 cut(s)	131, 260, 336, 418, 993
AflIII	ACRYGT	1 cut(s)	735
AgsI	TTSAA	4 cut(s)	1090, 1105, 1303, 1360
AjiI	CACGTC	2 cut(s)	325, 736
AjnI	CCWGG	2 cut(s)	660, 755
AjuI	GAANNNNNNNTTGG	2 cut(s)	110, 142
AleI	CACNNNNGTG	1 cut(s)	929
AluBI	AGCT	5 cut(s)	142, 639, 1193, 1204, 1265
AluI	AGCT	5 cut(s)	142, 639, 1193, 1204, 1265
Alw21I	GWGCWC	2 cut(s)	809, 915
Alw26I	GTCTC	1 cut(s)	44
AlwI	GGATC	3 cut(s)	347, 493, 677
Ama87I	CYCGRG	2 cut(s)	494, 908
ApeKI	GCWGC	2 cut(s)	20, 1225
ArsI	GACNNNNNNTTYG	6 cut(s)	58, 62, 90, 94, 708, 740
AspS9I	GGNCC	8 cut(s)	167, 177, 304, 421, 550, 837, 846, 895
AsuC2I	CCSGG	3 cut(s)	175, 302, 967
AsuHPI	GGTGA	4 cut(s)	76, 319, 478, 1043
AvaI	CYCGRG	2 cut(s)	494, 908
AvaII	GGWCC	4 cut(s)	167, 177, 421, 550
BaeGI	GKGCMC	1 cut(s)	794
BanI	GGYRCC	4 cut(s)	161, 461, 599, 791
BanII	GRGCYC	1 cut(s)	238
BauI	CACGAG	1 cut(s)	392
BbrPI	CACGTG	1 cut(s)	781
BbsI	GAAGAC	3 cut(s)	711, 754, 820
Bbv12I	GWGCWC	2 cut(s)	809, 915
BbvCI	CCTCAGC	1 cut(s)	7
BbvI	GCAGC	2 cut(s)	32, 1237
BccI	CCATC	5 cut(s)	275, 659, 848, 1262, 1288
BceAI	ACGGC	6 cut(s)	49, 120, 137, 347, 557, 613
BcgI	CGANNNNNNTGC	2 cut(s)	1219, 1253
BciT130I	CCWGG	2 cut(s)	662, 757
BcnI	CCSGG	3 cut(s)	175, 302, 967
BcoDI	GTCTC	1 cut(s)	44
BfaI	CTAG	1 cut(s)	1185
BfmI	CTRYAG	1 cut(s)	88
BfoI	RGCGCY	4 cut(s)	165, 465, 603, 950
BfuAI	ACCTGC	1 cut(s)	95
BglI	GCCNNNNNGGC	2 cut(s)	191, 845
Bme1390I	CCNGG	5 cut(s)	175, 302, 662, 757, 967
Bme18I	GGWCC	4 cut(s)	167, 177, 421, 550
BmeT110I	CYCGRG	2 cut(s)	494, 908
BmgBI	CACGTC	2 cut(s)	325, 736
BmgT120I	GGNCC	8 cut(s)	167, 177, 304, 421, 550, 837, 846, 895
BmiI	GGNNCC	8 cut(s)	163, 169, 178, 211, 265, 463, 601, 793
BmrFI	CCNGG	5 cut(s)	175, 302, 662, 757, 967
BmrI	ACTGGG	1 cut(s)	445
BmsI	GCATC	3 cut(s)	1105, 1168, 1276
BmuI	ACTGGG	1 cut(s)	445
BpiI	GAAGAC	3 cut(s)	711, 754, 820
Bpu10I	CCTNAGC	1 cut(s)	7
BpuMI	CCSGG	3 cut(s)	175, 302, 967
BsaAI	YACGTR	2 cut(s)	781, 973
BsaHI	GRCGYC	6 cut(s)	162, 462, 579, 600, 960, 1049
BsaI	GGTCTC	1 cut(s)	44
BsaJI	CCNNGG	7 cut(s)	189, 195, 240, 457, 546, 573, 756
Bsc4I	CCNNNNNNNGG	5 cut(s)	131, 260, 336, 418, 993
Bse118I	RCCGGY	3 cut(s)	164, 203, 794
Bse1I	ACTGG	1 cut(s)	451
BseBI	CCWGG	2 cut(s)	662, 757
BseDI	CCNNGG	7 cut(s)	189, 195, 240, 457, 546, 573, 756
BseGI	GGATG	6 cut(s)	267, 297, 1074, 1120, 1219, 1288
BseLI	CCNNNNNNNGG	5 cut(s)	131, 260, 336, 418, 993
BseMII	CTCAG	1 cut(s)	21
BseNI	ACTGG	1 cut(s)	451
BsePI	GCGCGC	1 cut(s)	557
BseRI	GAGGAG	5 cut(s)	48, 103, 499, 502, 1094
BseSI	GKGCMC	1 cut(s)	794
BseX3I	CGGCCG	1 cut(s)	133
BseXI	GCAGC	2 cut(s)	32, 1237
BsgI	GTGCAG	1 cut(s)	1244
Bsh1285I	CGRYCG	3 cut(s)	136, 319, 445
BshNI	GGYRCC	4 cut(s)	161, 461, 599, 791
BsiEI	CGRYCG	3 cut(s)	136, 319, 445
BsiHKAI	GWGCWC	2 cut(s)	809, 915
BsiHKCI	CYCGRG	2 cut(s)	494, 908
BsiSI	CCGG	9 cut(s)	165, 174, 204, 302, 477, 633, 795, 966, 987
BslFI	GGGAC	2 cut(s)	153, 439
BslI	CCNNNNNNNGG	5 cut(s)	131, 260, 336, 418, 993
BsmAI	GTCTC	1 cut(s)	44
BsmFI	GGGAC	2 cut(s)	153, 439
Bso31I	GGTCTC	1 cut(s)	44
BsoBI	CYCGRG	2 cut(s)	494, 908
Bsp1286I	GDGCHC	4 cut(s)	238, 794, 809, 915
Bsp1407I	TGTACA	1 cut(s)	1251
Bsp143I	GATC	6 cut(s)	27, 339, 498, 624, 669, 864
BspCNI	CTCAG	1 cut(s)	20
BspLI	GGNNCC	8 cut(s)	163, 169, 178, 211, 265, 463, 601, 793
BspMAI	CTGCAG	1 cut(s)	92
BspMI	ACCTGC	1 cut(s)	95
BspPI	GGATC	3 cut(s)	347, 493, 677
BspT107I	GGYRCC	4 cut(s)	161, 461, 599, 791
BspTNI	GGTCTC	1 cut(s)	44
BsrBI	CCGCTC	1 cut(s)	56
BsrFI	RCCGGY	3 cut(s)	164, 203, 794
BsrGI	TGTACA	1 cut(s)	1251
BsrI	ACTGG	1 cut(s)	451
BssAI	RCCGGY	3 cut(s)	164, 203, 794
BssECI	CCNNGG	7 cut(s)	189, 195, 240, 457, 546, 573, 756
BssHII	GCGCGC	1 cut(s)	557
BssMI	GATC	6 cut(s)	27, 339, 498, 624, 669, 864
BssNI	GRCGYC	6 cut(s)	162, 462, 579, 600, 960, 1049
BssSI	CACGAG	1 cut(s)	392
BssT1I	CCWWGG	2 cut(s)	195, 546
Bst2BI	CACGAG	1 cut(s)	392
Bst2UI	CCWGG	2 cut(s)	662, 757
Bst4CI	ACNGT	2 cut(s)	802, 1309
Bst6I	CTCTTC	2 cut(s)	230, 1085
BstACI	GRCGYC	6 cut(s)	162, 462, 579, 600, 960, 1049
BstAPI	GCANNNNNTGC	1 cut(s)	804
BstAUI	TGTACA	1 cut(s)	1251
BstBAI	YACGTR	2 cut(s)	781, 973
BstC8I	GCNNGC	8 cut(s)	18, 205, 234, 281, 307, 559, 570, 646
BstDEI	CTNAG	3 cut(s)	7, 1119, 1290
BstDSI	CCRYGG	2 cut(s)	457, 573
BstF5I	GGATG	6 cut(s)	267, 297, 1074, 1120, 1219, 1288
BstH2I	RGCGCY	4 cut(s)	165, 465, 603, 950
BstKTI	GATC	6 cut(s)	30, 342, 501, 627, 672, 867
BstMAI	GTCTC	1 cut(s)	44
BstMBI	GATC	6 cut(s)	27, 339, 498, 624, 669, 864
BstMCI	CGRYCG	3 cut(s)	136, 319, 445
BstNI	CCWGG	2 cut(s)	662, 757
BstNSI	RCATGY	1 cut(s)	283
BstSCI	CCNGG	5 cut(s)	173, 300, 660, 755, 965
BstSFI	CTRYAG	1 cut(s)	88
BstSLI	GKGCMC	1 cut(s)	794
BstV1I	GCAGC	2 cut(s)	32, 1237
BstV2I	GAAGAC	3 cut(s)	711, 754, 820
BstX2I	RGATCY	2 cut(s)	339, 498
BstYI	RGATCY	2 cut(s)	339, 498
BstZI	CGGCCG	1 cut(s)	133
BtgI	CCRYGG	2 cut(s)	457, 573
BtgZI	GCGATG	2 cut(s)	385, 637
BtrI	CACGTC	2 cut(s)	325, 736
BtsCI	GGATG	6 cut(s)	267, 297, 1074, 1120, 1219, 1288
BtsI	GCAGTG	1 cut(s)	792
BtsIMutI	CAGTG	2 cut(s)	792, 798
BveI	ACCTGC	1 cut(s)	95
Cac8I	GCNNGC	8 cut(s)	18, 205, 234, 281, 307, 559, 570, 646
Cfr10I	RCCGGY	3 cut(s)	164, 203, 794
Cfr13I	GGNCC	8 cut(s)	167, 177, 304, 421, 550, 837, 846, 895
Cfr42I	CCGCGG	1 cut(s)	460
CseI	GACGC	4 cut(s)	62, 601, 968, 1038
Csp6I	GTAC	4 cut(s)	721, 970, 1123, 1252
CviAII	CATG	4 cut(s)	280, 334, 406, 1231
CviQI	GTAC	4 cut(s)	721, 970, 1123, 1252
DdeI	CTNAG	3 cut(s)	7, 1119, 1290
DinI	GGCGCC	3 cut(s)	163, 463, 601
DpnI	GATC	6 cut(s)	29, 341, 500, 626, 671, 866
DpnII	GATC	6 cut(s)	27, 339, 498, 624, 669, 864
DraIII	CACNNNGTG	1 cut(s)	804
DrdI	GACNNNNNNGTC	3 cut(s)	323, 584, 824
DseDI	GACNNNNNNGTC	3 cut(s)	323, 584, 824
EaeI	YGGCCR	2 cut(s)	133, 198
EagI	CGGCCG	1 cut(s)	133
Eam1104I	CTCTTC	2 cut(s)	230, 1085
EarI	CTCTTC	2 cut(s)	230, 1085
EciI	GGCGGA	5 cut(s)	172, 222, 276, 374, 401
EclXI	CGGCCG	1 cut(s)	133
Eco130I	CCWWGG	2 cut(s)	195, 546
Eco147I	AGGCCT	1 cut(s)	194
Eco24I	GRGCYC	1 cut(s)	238
Eco31I	GGTCTC	1 cut(s)	44
Eco47I	GGWCC	4 cut(s)	167, 177, 421, 550
Eco52I	CGGCCG	1 cut(s)	133
Eco72I	CACGTG	1 cut(s)	781
Eco88I	CYCGRG	2 cut(s)	494, 908
EcoO109I	RGGNCCY	2 cut(s)	177, 421
EcoRII	CCWGG	2 cut(s)	660, 755
EcoT14I	CCWWGG	2 cut(s)	195, 546
EcoT38I	GRGCYC	1 cut(s)	238
EgeI	GGCGCC	3 cut(s)	163, 463, 601
EheI	GGCGCC	3 cut(s)	163, 463, 601
ErhI	CCWWGG	2 cut(s)	195, 546
FaeI	CATG	4 cut(s)	283, 337, 409, 1234
FaiI	YATR	6 cut(s)	281, 335, 407, 1170, 1221, 1232
FaqI	GGGAC	2 cut(s)	153, 439
FatI	CATG	4 cut(s)	279, 333, 405, 1230
FauI	CCCGC	7 cut(s)	178, 314, 338, 464, 497, 511, 926
FblI	GTMKAC	1 cut(s)	366
FokI	GGATG	6 cut(s)	254, 284, 1081, 1127, 1226, 1295
FriOI	GRGCYC	1 cut(s)	238
FspBI	CTAG	1 cut(s)	1185
HaeII	RGCGCY	4 cut(s)	165, 465, 603, 950
HapII	CCGG	9 cut(s)	165, 174, 204, 302, 477, 633, 795, 966, 987
HgaI	GACGC	4 cut(s)	62, 601, 968, 1038
Hin1I	GRCGYC	6 cut(s)	162, 462, 579, 600, 960, 1049
Hin1II	CATG	4 cut(s)	283, 337, 409, 1234
HincII	GTYRAC	1 cut(s)	367
HindII	GTYRAC	1 cut(s)	367
HindIII	AAGCTT	1 cut(s)	1191
HinfI	GANTC	3 cut(s)	93, 428, 879
HpaII	CCGG	9 cut(s)	165, 174, 204, 302, 477, 633, 795, 966, 987
HphI	GGTGA	4 cut(s)	76, 319, 478, 1043
Hpy166II	GTNNAC	3 cut(s)	367, 538, 577
Hpy188I	TCNGA	3 cut(s)	244, 728, 1054
Hpy188III	TCNNGA	2 cut(s)	496, 1240
Hpy8I	GTNNAC	3 cut(s)	367, 538, 577
HpyAV	CCTTC	3 cut(s)	136, 442, 1153
HpyCH4III	ACNGT	2 cut(s)	802, 1309
HpyCH4IV	ACGT	8 cut(s)	324, 531, 579, 723, 735, 780, 972, 1133
HpyCH4V	TGCA	4 cut(s)	90, 279, 1156, 1225
HpyF3I	CTNAG	3 cut(s)	7, 1119, 1290
HpySE526I	ACGT	8 cut(s)	324, 531, 579, 723, 735, 780, 972, 1133
Hsp92I	GRCGYC	6 cut(s)	162, 462, 579, 600, 960, 1049
Hsp92II	CATG	4 cut(s)	283, 337, 409, 1234
KasI	GGCGCC	3 cut(s)	161, 461, 599
KroI	GCCGGC	1 cut(s)	203
KroNI	GCCGGC	1 cut(s)	205
KspI	CCGCGG	1 cut(s)	460
Kzo9I	GATC	6 cut(s)	27, 339, 498, 624, 669, 864
LmnI	GCTCC	7 cut(s)	61, 147, 209, 263, 414, 812, 1201
Lsp1109I	GCAGC	2 cut(s)	32, 1237
LweI	GCATC	3 cut(s)	1105, 1168, 1276
MaeI	CTAG	1 cut(s)	1185
MaeII	ACGT	8 cut(s)	324, 531, 579, 723, 735, 780, 972, 1133
MaeIII	GTNAC	4 cut(s)	325, 484, 973, 1244
MalI	GATC	6 cut(s)	29, 341, 500, 626, 671, 866
MbiI	CCGCTC	1 cut(s)	56
MboI	GATC	6 cut(s)	27, 339, 498, 624, 669, 864
MboII	GAAGA	6 cut(s)	217, 334, 716, 754, 820, 1102
MflI	RGATCY	2 cut(s)	339, 498
MhlI	GDGCHC	4 cut(s)	238, 794, 809, 915
MluCI	AATT	1 cut(s)	951
Mly113I	GGCGCC	3 cut(s)	162, 462, 600
MlyI	GAGTC	2 cut(s)	422, 888
MmeI	TCCRAC	4 cut(s)	141, 378, 706, 1032
MreI	CGCCGGCG	1 cut(s)	203
MroNI	GCCGGC	1 cut(s)	203
MseI	TTAA	1 cut(s)	44
MslI	CAYNNNNRTG	4 cut(s)	332, 404, 887, 929
MspA1I	CMGCKG	2 cut(s)	459, 870
MspI	CCGG	9 cut(s)	165, 174, 204, 302, 477, 633, 795, 966, 987
MspR9I	CCNGG	5 cut(s)	175, 302, 662, 757, 967
MvaI	CCWGG	2 cut(s)	662, 757
NaeI	GCCGGC	1 cut(s)	205
NarI	GGCGCC	3 cut(s)	162, 462, 600
NciI	CCSGG	3 cut(s)	175, 302, 967
NdeII	GATC	6 cut(s)	27, 339, 498, 624, 669, 864
NgoMIV	GCCGGC	1 cut(s)	203
NlaIII	CATG	4 cut(s)	283, 337, 409, 1234
NlaIV	GGNNCC	8 cut(s)	163, 169, 178, 211, 265, 463, 601, 793
NmeAIII	GCCGAG	2 cut(s)	214, 238
NmuCI	GTSAC	3 cut(s)	325, 484, 973
NspI	RCATGY	1 cut(s)	283
OliI	CACNNNNGTG	1 cut(s)	929
PaeI	GCATGC	1 cut(s)	283
PaeR7I	CTCGAG	1 cut(s)	494
PaqCI	CACCTGC	1 cut(s)	95
PauI	GCGCGC	1 cut(s)	557
PceI	AGGCCT	1 cut(s)	194
PcsI	WCGNNNNNNNCGW	9 cut(s)	20, 291, 321, 528, 570, 576, 729, 732, 741
PdiI	GCCGGC	1 cut(s)	205
PfeI	GAWTC	1 cut(s)	93
PflFI	GACNNNGTC	1 cut(s)	581
PfoI	TCCNGGA	1 cut(s)	660
PleI	GAGTC	2 cut(s)	422, 887
PluTI	GGCGCC	3 cut(s)	165, 465, 603
PmaCI	CACGTG	1 cut(s)	781
PmlI	CACGTG	1 cut(s)	781
PpsI	GAGTC	2 cut(s)	422, 887
Ppu21I	YACGTR	2 cut(s)	781, 973
PpuMI	RGGWCCY	2 cut(s)	177, 421
Psp5II	RGGWCCY	2 cut(s)	177, 421
Psp6I	CCWGG	2 cut(s)	660, 755
PspCI	CACGTG	1 cut(s)	781
PspGI	CCWGG	2 cut(s)	660, 755
PspN4I	GGNNCC	8 cut(s)	163, 169, 178, 211, 265, 463, 601, 793
PspPI	GGNCC	8 cut(s)	167, 177, 304, 421, 550, 837, 846, 895
PspPPI	RGGWCCY	2 cut(s)	177, 421
PstI	CTGCAG	1 cut(s)	92
PsuI	RGATCY	2 cut(s)	339, 498
PsyI	GACNNNGTC	1 cut(s)	581
PteI	GCGCGC	1 cut(s)	557
RsaI	GTAC	4 cut(s)	722, 971, 1124, 1253
RsaNI	GTAC	4 cut(s)	721, 970, 1123, 1252
RseI	CAYNNNNRTG	4 cut(s)	332, 404, 887, 929
SacII	CCGCGG	1 cut(s)	460
SalI	GTCGAC	1 cut(s)	365
SaqAI	TTAA	1 cut(s)	44
Sau3AI	GATC	6 cut(s)	27, 339, 498, 624, 669, 864
Sau96I	GGNCC	8 cut(s)	167, 177, 304, 421, 550, 837, 846, 895
SchI	GAGTC	2 cut(s)	422, 888
ScrFI	CCNGG	5 cut(s)	175, 302, 662, 757, 967
SduI	GDGCHC	4 cut(s)	238, 794, 809, 915
SfaNI	GCATC	3 cut(s)	1105, 1168, 1276
SfcI	CTRYAG	1 cut(s)	88
SfiI	GGCCNNNNNGGCC	1 cut(s)	845
SfoI	GGCGCC	3 cut(s)	163, 463, 601
Sfr274I	CTCGAG	1 cut(s)	494
Sfr303I	CCGCGG	1 cut(s)	460
SgrAI	CRCCGGYG	1 cut(s)	203
SgrBI	CCGCGG	1 cut(s)	460
SinI	GGWCC	4 cut(s)	167, 177, 421, 550
SlaI	CTCGAG	1 cut(s)	494
SmiMI	CAYNNNNRTG	4 cut(s)	332, 404, 887, 929
SmlI	CTYRAG	1 cut(s)	494
SmoI	CTYRAG	1 cut(s)	494
SphI	GCATGC	1 cut(s)	283
Sse9I	AATT	1 cut(s)	951
SseBI	AGGCCT	1 cut(s)	194
SspDI	GGCGCC	3 cut(s)	161, 461, 599
SspMI	CTAG	1 cut(s)	1185
StuI	AGGCCT	1 cut(s)	194
StyD4I	CCNGG	5 cut(s)	173, 300, 660, 755, 965
StyI	CCWWGG	2 cut(s)	195, 546
TaaI	ACNGT	2 cut(s)	802, 1309
TaiI	ACGT	8 cut(s)	327, 534, 582, 726, 738, 783, 975, 1136
TaqI	TCGA	9 cut(s)	228, 285, 294, 315, 366, 426, 495, 623, 1239
TaqII	GACCGA	1 cut(s)	66
TasI	AATT	1 cut(s)	951
TatI	WGTACW	2 cut(s)	1122, 1251
TfiI	GAWTC	1 cut(s)	93
Tru1I	TTAA	1 cut(s)	44
Tru9I	TTAA	1 cut(s)	44
TscAI	CASTG	2 cut(s)	792, 805
TseFI	GTSAC	3 cut(s)	325, 484, 973
TseI	GCWGC	2 cut(s)	20, 1225
Tsp45I	GTSAC	3 cut(s)	325, 484, 973
TspDTI	ATGAA	1 cut(s)	388
TspRI	CASTG	2 cut(s)	792, 805
Tth111I	GACNNNGTC	1 cut(s)	581
VpaK11BI	GGWCC	4 cut(s)	167, 177, 421, 550
XceI	RCATGY	1 cut(s)	283
XhoI	CTCGAG	1 cut(s)	494
XmiI	GTMKAC	1 cut(s)	366
XspI	CTAG	1 cut(s)	1185
ZraI	GACGTC	1 cut(s)	580

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.