MD00G1179500.v1.1

Histone-lysine N-methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
OG0005087
Physical Location & Seq
Reverse (-)
42102840 .. 42107157
4318 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1179500.v1.1.491

Sequence Viewer

Length: 1875 bp
ATGAACTTGATGGCCTTTCAGGAACATGGCCTAGGCGAGGAAGTAGTGGAACTTGTGAAGGAGTTTATTGGAGCTCCCATTTCAGATATCCTGGCCCGTTATAACACAATCAAGGAAAGGAACCCCGAGAAGTGCGAACATGATGGGTGCATTTCTCTTGATAAGAGTCTTAATGCTGCCTTAGATTCTTTCGATAACCTTTTCTGTCGCCGTTGCTTGGTATTTGATTGTCGTTTGCATGGATGTTCTCAACCTTTAATCTATCCTAGTGAAAAGTCACATTGGTCCGGTCATGACGAGAACCGGGAACCGTGCAGTGATCAATGTTACCTCAGGTGGAGTATAGTACCATCAGAGAGAGAAAGTGCTCCAGGATCATCCATTAATGCCGAGCGACCAAGTTCCCATGGTGGTACTGACCTCTTACACAATGAAAGAAGTATTCCTGGTGAAGCTGTGCCTGCAACTTCAGAAGCCATTCATAGTTCTCATATCTTGAAGATGCACAATGAAAACACAGGGAAGCGCAAGGTTGTGAAGCATACAGATAAAGTGGCAAATGACCTAACTATAGTACCTGATGCTTTCCGGGGTTCTTCTAAGAAACAAAAGAGATTAGATGCTTTGGATTTGGTAACTGCTACTAGTGAACCTATCCCGCTTCAGGTTCACATTCCCAGAGATGAGCCACGAGATGTAACCGAAGTGCCTGAACTGAGGCAAACATCCAATTCTACATGTGAACAAGTTGAGGGGATCTGTAGCAACTCTGAGTGGAAACCAGTGGAGAAAGATTTATACATGAAGGGACTACAGATATTTGGGAGAAACAGTTGCCTCATAGCTAGGAACTTACTCTCTGGCTTGAGGACTTGCATGGAGGTGTCTAGTTACATGCATAATTCTGGAGCTTCAATGCCTAACAGATCTGTGGTTGGACCATCTTCATTTATGGAAGACAATGTGAAATCTGATATGGATCAGACAGAACAAGAGATGTCATCAAAGCCACGGTTACTTCGTAGAAGGGGCAAAGCACGGAGGCTTAAGTATTCTTGGAAGTCTGCTGGGCACCCAACAATGTGGAAAAGAATTGCTGATGGAAAAAACGATTCACGTAAACTATATACGCCATGTGGATGCCAGTCTATGTGTGGAAAGGAATGTTCTTGTATGAGTAATGGAACCTGCTGTGAAAAATACTGTGGGTGTTCAAAGAGCTGCAAAAATAGGTTCAGGGGATGTCACTGTGCAAAGAGTCAATGTAGAAGTCGGCAGTGCCCATGCTTTGCTGCTGGCCGTGAATGTGACCCAGATGTCTGTCGTCATTGTTGGGTTAGTTGTGGGGATGGTTCGCTAGGTGAGCCACCGAGACAGGGAGATAGTCAATGTGGAAACATGAGGCTTCTTCTTCGACAGCAACAGAGGATTCTCCTGGGCAAGTCTGATGTTGCTGGCTGGGGAGCCTTCTTAAAGAACCCCGTAAACAAGAATGATTATCTTGGAGAATACACTGGTGAAATCATCTCCCATCAGGAAGCAGACAAGCGGGGGAAGATTTATGATCGTGTAAACTCGTCATTCCTTTTCGACTTGAATGAACAGTACGTCCTAGATGCTTACCGAAAGGGAGACAAGCTTAAATTTGCAAACCACTCGTCGAATCCTAACTGCCATGCAAAGGTAATGCTGGTCGCGGGTGATCATCGAGTTGGCATATTTGCCAAGGAGCATATTGATGCTGGTGAGGAGCTCTTCTATGATTATTGTTATCTTTCAGAGGCAGCACCTGTATGGGCTCAAAAACCGGAGGGTTCTAAGAGGGACGATTCATCTGCTTCCAGGGGCAGAGCGAAAAAGCACCAACCTCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0003723 GO:0003727 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005677 GO:0005911 GO:0006139 GO:0006325 GO:0006342 GO:0006349 GO:0006355 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008213 GO:0009314 GO:0009416 GO:0009506 GO:0009628 GO:0009642 GO:0009646 GO:0009653 GO:0009791 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010154 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016458 GO:0016569 GO:0016570 GO:0016571 GO:0017053 GO:0018022 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0022414 GO:0030054 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031519 GO:0031974 GO:0031981 GO:0032259 GO:0032501 GO:0032502 GO:0032991 GO:0034641 GO:0034968 GO:0036211 GO:0040029 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043414 GO:0043565 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045814 GO:0045892 GO:0045934 GO:0046483 GO:0048316 GO:0048317 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048587 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051239 GO:0051252 GO:0051253 GO:0051276 GO:0055044 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0070734 GO:0071514 GO:0071704 GO:0071840 GO:0080050 GO:0080090 GO:0090568 GO:0090698 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1901564 GO:1902679 GO:1903506 GO:1903507 GO:2000014 GO:2000026 GO:2000028 GO:2000112 GO:2000113 GO:2000241 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko00310 ko05206 map00310 map05206
Pfam Domains
Protein Families
SET

Protein Analysis

625

Amino Acids

69.96

Weight (kDa)

8.25

Isoelectric Point (pI)

53.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HTH_CLF_N PF25996 4 - 38 9e-12 Histone-lysine N-methyltransferase CLF, N-terminal HTH domain
preSET_CXC PF18264 414 - 445 2.5e-07 CXC domain
SET PF00856 486 - 589 1.5e-20 SET domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 102
AasI GACNNNNNNGTC 1 cut(s) 1316
Acc36I ACCTGC 1 cut(s) 1196
AccB1I GGYRCC 1 cut(s) 1071
AccII CGCG 1 cut(s) 1697
AciI CCGC 3 cut(s) 659, 1549, 1697
AclWI GGATC 3 cut(s) 382, 764, 987
AcoI YGGCCR 1 cut(s) 1297
AcsI RAATTY 1 cut(s) 1643
AcuI CTGAAG 2 cut(s) 453, 647
AfaI GTAC 4 cut(s) 348, 415, 576, 1607
AfiI CCNNNNNNNGG 5 cut(s) 37, 217, 664, 1376, 1681
AflII CTTAAG 1 cut(s) 1046
AflIII ACRYGT 1 cut(s) 737
AgsI TTSAA 4 cut(s) 499, 915, 1215, 1597
AhlI ACTAGT 1 cut(s) 644
AjnI CCWGG 5 cut(s) 90, 370, 445, 1434, 1841
AloI GAACNNNNNNTCC 2 cut(s) 1593, 1625
AluBI AGCT 7 cut(s) 74, 455, 845, 911, 1221, 1639, 1753
AluI AGCT 7 cut(s) 74, 455, 845, 911, 1221, 1639, 1753
Alw21I GWGCWC 3 cut(s) 76, 370, 1755
Alw26I GTCTC 2 cut(s) 1366, 1626
AlwI GGATC 3 cut(s) 382, 764, 987
AlwNI CAGNNNCTG 1 cut(s) 1790
Ama87I CYCGRG 1 cut(s) 125
AoxI GGCC 4 cut(s) 12, 28, 93, 1297
ApeKI GCWGC 4 cut(s) 176, 1221, 1292, 1784
ApoI RAATTY 1 cut(s) 1643
ArsI GACNNNNNNTTYG 2 cut(s) 1643, 1675
AseI ATTAAT 1 cut(s) 384
Asp700I GAANNNNTTC 1 cut(s) 477
AspA2I CCTAGG 1 cut(s) 31
AspLEI GCGC 1 cut(s) 528
AspS9I GGNCC 3 cut(s) 94, 285, 938
AsuC2I CCSGG 2 cut(s) 305, 590
AsuHPI GGTGA 5 cut(s) 461, 1373, 1529, 1712, 1757
AvaI CYCGRG 1 cut(s) 125
AvaII GGWCC 2 cut(s) 285, 938
AvrII CCTAGG 1 cut(s) 31
AxyI CCTNAGG 1 cut(s) 332
BaeGI GKGCMC 2 cut(s) 1074, 1283
BaeI ACNNNNGTAYC 2 cut(s) 558, 591
BanI GGYRCC 1 cut(s) 1071
BanII GRGCYC 3 cut(s) 76, 1755, 1801
BauI CACGAG 1 cut(s) 690
BbsI GAAGAC 1 cut(s) 963
Bbv12I GWGCWC 3 cut(s) 76, 370, 1755
BbvI GCAGC 4 cut(s) 163, 1208, 1279, 1796
BccI CCATC 7 cut(s) 4, 137, 358, 949, 1094, 1343, 1539
BceAI ACGGC 2 cut(s) 195, 1284
BcgI CGANNNNNNTGC 4 cut(s) 1638, 1672, 1817, 1851
BciT130I CCWGG 5 cut(s) 92, 372, 447, 1436, 1843
BclI TGATCA 2 cut(s) 319, 1702
BcnI CCSGG 2 cut(s) 305, 590
BcoDI GTCTC 2 cut(s) 1366, 1626
BcuI ACTAGT 1 cut(s) 644
BfaI CTAG 7 cut(s) 32, 267, 645, 846, 888, 1358, 1613
BfmI CTRYAG 3 cut(s) 570, 760, 812
BfrI CTTAAG 1 cut(s) 1046
BfuAI ACCTGC 1 cut(s) 1196
BglII AGATCT 1 cut(s) 926
BisI GCNGC 4 cut(s) 177, 1222, 1293, 1785
BlnI CCTAGG 1 cut(s) 31
BlsI GCNGC 4 cut(s) 178, 1223, 1294, 1786
Bme1390I CCNGG 7 cut(s) 92, 305, 372, 447, 590, 1436, 1843
Bme18I GGWCC 2 cut(s) 285, 938
BmeT110I CYCGRG 1 cut(s) 125
BmgT120I GGNCC 3 cut(s) 94, 285, 938
BmiI GGNNCC 5 cut(s) 122, 309, 1073, 1186, 1465
BmrFI CCNGG 7 cut(s) 92, 305, 372, 447, 590, 1436, 1843
BmsI GCATC 6 cut(s) 492, 571, 610, 1130, 1606, 1729
BpiI GAAGAC 1 cut(s) 963
BpmI CTGGAG 2 cut(s) 354, 927
BpuEI CTTGAG 1 cut(s) 886
BpuMI CCSGG 2 cut(s) 305, 590
BsaAI YACGTR 1 cut(s) 1118
BsaBI GATNNNNATC 1 cut(s) 978
BsaJI CCNNGG 7 cut(s) 31, 406, 589, 1010, 1435, 1725, 1842
BsaWI WCCGGW 2 cut(s) 287, 1807
BsaXI ACNNNNNCTCC 2 cut(s) 817, 847
Bsc4I CCNNNNNNNGG 5 cut(s) 37, 217, 664, 1376, 1681
Bse1I ACTGG 3 cut(s) 782, 1144, 1519
Bse21I CCTNAGG 1 cut(s) 332
Bse8I GATNNNNATC 1 cut(s) 978
BseBI CCWGG 5 cut(s) 92, 372, 447, 1436, 1843
BseDI CCNNGG 7 cut(s) 31, 406, 589, 1010, 1435, 1725, 1842
BseGI GGATG 6 cut(s) 248, 377, 725, 1145, 1247, 1354
BseJI GATNNNNATC 1 cut(s) 978
BseLI CCNNNNNNNGG 5 cut(s) 37, 217, 664, 1376, 1681
BseMII CTCAG 3 cut(s) 346, 707, 762
BseNI ACTGG 3 cut(s) 782, 1144, 1519
BseRI GAGGAG 1 cut(s) 1763
BseSI GKGCMC 2 cut(s) 1074, 1283
BseXI GCAGC 4 cut(s) 163, 1208, 1279, 1796
BseYI CCCAGC 2 cut(s) 1067, 1458
BsgI GTGCAG 1 cut(s) 334
Bsh1236I CGCG 1 cut(s) 1697
BshFI GGCC 4 cut(s) 14, 30, 95, 1299
BshNI GGYRCC 1 cut(s) 1071
BsiHKAI GWGCWC 3 cut(s) 76, 370, 1755
BsiHKCI CYCGRG 1 cut(s) 125
BsiSI CCGG 4 cut(s) 288, 304, 589, 1808
BslFI GGGAC 2 cut(s) 822, 1838
BslI CCNNNNNNNGG 5 cut(s) 37, 217, 664, 1376, 1681
BsmAI GTCTC 2 cut(s) 1366, 1626
BsmFI GGGAC 2 cut(s) 822, 1838
BsnI GGCC 4 cut(s) 14, 30, 95, 1299
BsoBI CYCGRG 1 cut(s) 125
Bsp1286I GDGCHC 6 cut(s) 76, 370, 1074, 1283, 1755, 1801
Bsp143I GATC 7 cut(s) 319, 374, 756, 926, 979, 1564, 1702
Bsp19I CCATGG 1 cut(s) 406
BspACI CCGC 3 cut(s) 659, 1549, 1697
BspANI GGCC 4 cut(s) 14, 30, 95, 1299
BspCNI CTCAG 3 cut(s) 345, 708, 763
BspFNI CGCG 1 cut(s) 1697
BspHI TCATGA 1 cut(s) 292
BspLI GGNNCC 5 cut(s) 122, 309, 1073, 1186, 1465
BspMI ACCTGC 1 cut(s) 1196
BspPI GGATC 3 cut(s) 382, 764, 987
BspQI GCTCTTC 1 cut(s) 1760
BspT107I GGYRCC 1 cut(s) 1071
BspTI CTTAAG 1 cut(s) 1046
BsrI ACTGG 3 cut(s) 782, 1144, 1519
BssECI CCNNGG 7 cut(s) 31, 406, 589, 1010, 1435, 1725, 1842
BssMI GATC 7 cut(s) 319, 374, 756, 926, 979, 1564, 1702
BssSI CACGAG 1 cut(s) 690
BssT1I CCWWGG 3 cut(s) 31, 406, 1725
Bst2BI CACGAG 1 cut(s) 690
Bst2UI CCWGG 5 cut(s) 92, 372, 447, 1436, 1843
Bst4CI ACNGT 6 cut(s) 312, 833, 1014, 1205, 1250, 1605
Bst6I CTCTTC 1 cut(s) 1760
BstAFI CTTAAG 1 cut(s) 1046
BstBAI YACGTR 1 cut(s) 1118
BstC8I GCNNGC 3 cut(s) 462, 1297, 1456
BstDEI CTNAG 6 cut(s) 181, 332, 600, 716, 771, 1818
BstDSI CCRYGG 2 cut(s) 406, 1010
BstENI CCTNNNNNAGG 1 cut(s) 35
BstF5I GGATG 6 cut(s) 248, 377, 725, 1145, 1247, 1354
BstFNI CGCG 1 cut(s) 1697
BstHHI GCGC 1 cut(s) 528
BstKTI GATC 7 cut(s) 322, 377, 759, 929, 982, 1567, 1705
BstMAI GTCTC 2 cut(s) 1366, 1626
BstMBI GATC 7 cut(s) 319, 374, 756, 926, 979, 1564, 1702
BstMWI GCNNNNNNNGC 2 cut(s) 461, 1363
BstNI CCWGG 5 cut(s) 92, 372, 447, 1436, 1843
BstNSI RCATGY 2 cut(s) 741, 898
BstSCI CCNGG 7 cut(s) 90, 303, 370, 445, 588, 1434, 1841
BstSFI CTRYAG 3 cut(s) 570, 760, 812
BstSLI GKGCMC 2 cut(s) 1074, 1283
BstUI CGCG 1 cut(s) 1697
BstV1I GCAGC 4 cut(s) 163, 1208, 1279, 1796
BstV2I GAAGAC 1 cut(s) 963
BstX2I RGATCY 2 cut(s) 756, 926
BstXI CCANNNNNNTGG 1 cut(s) 1083
BstYI RGATCY 2 cut(s) 756, 926
Bsu36I CCTNAGG 1 cut(s) 332
BsuRI GGCC 4 cut(s) 14, 30, 95, 1299
BtgI CCRYGG 2 cut(s) 406, 1010
BtsCI GGATG 6 cut(s) 248, 377, 725, 1145, 1247, 1354
BtsI GCAGTG 2 cut(s) 322, 1283
BtsIMutI CAGTG 5 cut(s) 322, 789, 1246, 1283, 1512
BveI ACCTGC 1 cut(s) 1196
Cac8I GCNNGC 3 cut(s) 462, 1297, 1456
CaiI CAGNNNCTG 1 cut(s) 1790
CciI TCATGA 1 cut(s) 292
CfoI GCGC 1 cut(s) 528
Cfr13I GGNCC 3 cut(s) 94, 285, 938
Csp6I GTAC 4 cut(s) 347, 414, 575, 1606
CviQI GTAC 4 cut(s) 347, 414, 575, 1606
DdeI CTNAG 6 cut(s) 181, 332, 600, 716, 771, 1818
DpnI GATC 7 cut(s) 321, 376, 758, 928, 981, 1566, 1704
DpnII GATC 7 cut(s) 319, 374, 756, 926, 979, 1564, 1702
DrdI GACNNNNNNGTC 1 cut(s) 1316
DseDI GACNNNNNNGTC 1 cut(s) 1316
EaeI YGGCCR 1 cut(s) 1297
Eam1104I CTCTTC 1 cut(s) 1760
EarI CTCTTC 1 cut(s) 1760
Ecl136II GAGCTC 2 cut(s) 74, 1753
Eco130I CCWWGG 3 cut(s) 31, 406, 1725
Eco24I GRGCYC 3 cut(s) 76, 1755, 1801
Eco32I GATATC 1 cut(s) 88
Eco47I GGWCC 2 cut(s) 285, 938
Eco53kI GAGCTC 2 cut(s) 74, 1753
Eco57I CTGAAG 2 cut(s) 453, 647
Eco81I CCTNAGG 1 cut(s) 332
Eco88I CYCGRG 1 cut(s) 125
EcoICRI GAGCTC 2 cut(s) 74, 1753
EcoNI CCTNNNNNAGG 1 cut(s) 35
EcoRII CCWGG 5 cut(s) 90, 370, 445, 1434, 1841
EcoRV GATATC 1 cut(s) 88
EcoT14I CCWWGG 3 cut(s) 31, 406, 1725
EcoT22I ATGCAT 1 cut(s) 900
EcoT38I GRGCYC 3 cut(s) 76, 1755, 1801
ErhI CCWWGG 3 cut(s) 31, 406, 1725
FaqI GGGAC 2 cut(s) 822, 1838
FauI CCCGC 3 cut(s) 666, 1542, 1690
FbaI TGATCA 2 cut(s) 319, 1702
Fnu4HI GCNGC 4 cut(s) 177, 1222, 1293, 1785
FokI GGATG 6 cut(s) 255, 364, 712, 1152, 1254, 1361
FriOI GRGCYC 3 cut(s) 76, 1755, 1801
Fsp4HI GCNGC 4 cut(s) 177, 1222, 1293, 1785
FspBI CTAG 7 cut(s) 32, 267, 645, 846, 888, 1358, 1613
GlaI GCGC 1 cut(s) 527
GluI GCNGC 4 cut(s) 177, 1222, 1293, 1785
GsaI CCCAGC 2 cut(s) 1071, 1462
GsuI CTGGAG 2 cut(s) 354, 927
HaeIII GGCC 4 cut(s) 14, 30, 95, 1299
HapII CCGG 4 cut(s) 288, 304, 589, 1808
HhaI GCGC 1 cut(s) 528
Hin6I GCGC 1 cut(s) 526
HinP1I GCGC 1 cut(s) 526
HindIII AAGCTT 1 cut(s) 1637
HinfI GANTC 7 cut(s) 166, 185, 1112, 1258, 1429, 1663, 1829
HpaII CCGG 4 cut(s) 288, 304, 589, 1808
HphI GGTGA 5 cut(s) 461, 1373, 1529, 1712, 1757
Hpy166II GTNNAC 6 cut(s) 650, 670, 743, 1121, 1486, 1573
Hpy188I TCNGA 8 cut(s) 85, 355, 472, 772, 973, 984, 1447, 1780
Hpy188III TCNNGA 6 cut(s) 20, 158, 293, 496, 906, 1535
Hpy8I GTNNAC 6 cut(s) 650, 670, 743, 1121, 1486, 1573
Hpy99I CGWCG 1 cut(s) 1663
HpyAV CCTTC 4 cut(s) 52, 799, 1020, 1477
HpyCH4III ACNGT 6 cut(s) 312, 833, 1014, 1205, 1250, 1605
HpyCH4IV ACGT 2 cut(s) 1117, 1608
HpyF10VI GCNNNNNNNGC 2 cut(s) 461, 1363
HpyF3I CTNAG 6 cut(s) 181, 332, 600, 716, 771, 1818
HpySE526I ACGT 2 cut(s) 1117, 1608
HspAI GCGC 1 cut(s) 526
Ksp22I TGATCA 2 cut(s) 319, 1702
Kzo9I GATC 7 cut(s) 319, 374, 756, 926, 979, 1564, 1702
LguI GCTCTTC 1 cut(s) 1760
LmnI GCTCC 7 cut(s) 71, 79, 373, 908, 1463, 1729, 1750
Lsp1109I GCAGC 4 cut(s) 163, 1208, 1279, 1796
LweI GCATC 6 cut(s) 492, 571, 610, 1130, 1606, 1729
MaeI CTAG 7 cut(s) 32, 267, 645, 846, 888, 1358, 1613
MaeII ACGT 2 cut(s) 1117, 1608
MaeIII GTNAC 8 cut(s) 276, 326, 634, 697, 890, 1014, 1244, 1307
MalI GATC 7 cut(s) 321, 376, 758, 928, 981, 1566, 1704
MboI GATC 7 cut(s) 319, 374, 756, 926, 979, 1564, 1702
MboII GAAGA 8 cut(s) 511, 588, 936, 968, 1400, 1403, 1567, 1747
MflI RGATCY 2 cut(s) 756, 926
MhlI GDGCHC 6 cut(s) 76, 370, 1074, 1283, 1755, 1801
MluCI AATT 4 cut(s) 730, 901, 1092, 1643
MlyI GAGTC 2 cut(s) 175, 1267
MmeI TCCRAC 1 cut(s) 916
Mph1103I ATGCAT 1 cut(s) 900
MroXI GAANNNNTTC 1 cut(s) 477
MseI TTAA 6 cut(s) 171, 257, 384, 1047, 1472, 1641
MslI CAYNNNNRTG 4 cut(s) 881, 1138, 1737, 1792
MspCI CTTAAG 1 cut(s) 1046
MspI CCGG 4 cut(s) 288, 304, 589, 1808
MspR9I CCNGG 7 cut(s) 92, 305, 372, 447, 590, 1436, 1843
MvaI CCWGG 5 cut(s) 92, 372, 447, 1436, 1843
MvnI CGCG 1 cut(s) 1697
MwoI GCNNNNNNNGC 2 cut(s) 461, 1363
NciI CCSGG 2 cut(s) 305, 590
NcoI CCATGG 1 cut(s) 406
NdeII GATC 7 cut(s) 319, 374, 756, 926, 979, 1564, 1702
NlaIV GGNNCC 5 cut(s) 122, 309, 1073, 1186, 1465
NmeAIII GCCGAG 1 cut(s) 415
NmuCI GTSAC 3 cut(s) 276, 1244, 1307
NsiI ATGCAT 1 cut(s) 900
NspI RCATGY 2 cut(s) 741, 898
PagI TCATGA 1 cut(s) 292
PciI ACATGT 1 cut(s) 737
PciSI GCTCTTC 1 cut(s) 1760
PcsI WCGNNNNNNNCGW 1 cut(s) 1018
PdmI GAANNNNTTC 1 cut(s) 477
PfeI GAWTC 5 cut(s) 185, 1112, 1429, 1663, 1829
PfoI TCCNGGA 1 cut(s) 370
PkrI GCNGC 4 cut(s) 178, 1223, 1294, 1786
PleI GAGTC 2 cut(s) 174, 1266
PpsI GAGTC 2 cut(s) 174, 1266
Ppu21I YACGTR 1 cut(s) 1118
PscI ACATGT 1 cut(s) 737
PshBI ATTAAT 1 cut(s) 384
PsiI TTATAA 1 cut(s) 102
Psp124BI GAGCTC 2 cut(s) 76, 1755
Psp6I CCWGG 5 cut(s) 90, 370, 445, 1434, 1841
PspFI CCCAGC 2 cut(s) 1067, 1458
PspGI CCWGG 5 cut(s) 90, 370, 445, 1434, 1841
PspN4I GGNNCC 5 cut(s) 122, 309, 1073, 1186, 1465
PspPI GGNCC 3 cut(s) 94, 285, 938
PstNI CAGNNNCTG 1 cut(s) 1790
PsuI RGATCY 2 cut(s) 756, 926
RsaI GTAC 4 cut(s) 348, 415, 576, 1607
RsaNI GTAC 4 cut(s) 347, 414, 575, 1606
RseI CAYNNNNRTG 4 cut(s) 881, 1138, 1737, 1792
SacI GAGCTC 2 cut(s) 76, 1755
SapI GCTCTTC 1 cut(s) 1760
SaqAI TTAA 6 cut(s) 171, 257, 384, 1047, 1472, 1641
SatI GCNGC 4 cut(s) 177, 1222, 1293, 1785
Sau3AI GATC 7 cut(s) 319, 374, 756, 926, 979, 1564, 1702
Sau96I GGNCC 3 cut(s) 94, 285, 938
SchI GAGTC 2 cut(s) 175, 1267
ScrFI CCNGG 7 cut(s) 92, 305, 372, 447, 590, 1436, 1843
SduI GDGCHC 6 cut(s) 76, 370, 1074, 1283, 1755, 1801
SfaNI GCATC 6 cut(s) 492, 571, 610, 1130, 1606, 1729
SfcI CTRYAG 3 cut(s) 570, 760, 812
SinI GGWCC 2 cut(s) 285, 938
SmiMI CAYNNNNRTG 4 cut(s) 881, 1138, 1737, 1792
SmlI CTYRAG 2 cut(s) 865, 1046
SmoI CTYRAG 2 cut(s) 865, 1046
SpeI ACTAGT 1 cut(s) 644
Sse9I AATT 4 cut(s) 730, 901, 1092, 1643
SsiI CCGC 3 cut(s) 659, 1549, 1697
SspMI CTAG 7 cut(s) 32, 267, 645, 846, 888, 1358, 1613
SstI GAGCTC 2 cut(s) 76, 1755
StyD4I CCNGG 7 cut(s) 90, 303, 370, 445, 588, 1434, 1841
StyI CCWWGG 3 cut(s) 31, 406, 1725
TaaI ACNGT 6 cut(s) 312, 833, 1014, 1205, 1250, 1605
TaiI ACGT 2 cut(s) 1120, 1611
TaqI TCGA 5 cut(s) 192, 1414, 1590, 1661, 1708
TasI AATT 4 cut(s) 730, 901, 1092, 1643
TfiI GAWTC 5 cut(s) 185, 1112, 1429, 1663, 1829
Tru1I TTAA 6 cut(s) 171, 257, 384, 1047, 1472, 1641
Tru9I TTAA 6 cut(s) 171, 257, 384, 1047, 1472, 1641
TscAI CASTG 5 cut(s) 322, 789, 1253, 1283, 1519
TseFI GTSAC 3 cut(s) 276, 1244, 1307
TseI GCWGC 4 cut(s) 176, 1221, 1292, 1784
Tsp45I GTSAC 3 cut(s) 276, 1244, 1307
TspDTI ATGAA 8 cut(s) 17, 447, 470, 525, 818, 936, 1614, 1821
TspGWI ACGGA 1 cut(s) 1054
TspRI CASTG 5 cut(s) 322, 789, 1253, 1283, 1519
Vha464I CTTAAG 1 cut(s) 1046
VpaK11BI GGWCC 2 cut(s) 285, 938
VspI ATTAAT 1 cut(s) 384
XagI CCTNNNNNAGG 1 cut(s) 35
XapI RAATTY 1 cut(s) 1643
XceI RCATGY 2 cut(s) 741, 898
XcmI CCANNNNNNNNNTGG 1 cut(s) 1151
XmaJI CCTAGG 1 cut(s) 31
XmnI GAANNNNTTC 1 cut(s) 477
XspI CTAG 7 cut(s) 32, 267, 645, 846, 888, 1358, 1613
Zsp2I ATGCAT 1 cut(s) 900
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.