Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0015176

Physical Location & Seq

Genomic Coordinates Reverse (-)

15368097 .. 15372652

Gene Structure 4556 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1050400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1461 bp

ATGGAAAGCGATGATGAGACATCGGGACCAATGATCGACGACGAGATCTACACTAATGGCGTTTACGGCCATGACGAGAAGCGCAGCCGACCGATCATCAACAGCGAGCAATTCGATATCAAGGCCTACGCGAGCCTGTACAGCGGCCGTACCAAGATCATGCACCTCATTTTCACCGTCGAGAGGAGCCAGAGCAACCAGGCTATGGAGTTGGAGGCTCTTCGCATGGCGTACGACGAAATCAAGAAGGCGGAGAACACCCAGTTGCACAGAGAGGTTGTGCAGAAGATCGGTGGTCGATTGGGCCCGAGTATGGAATGGACGTGGCTTGGTGCGACGCGGTGGATAGGAGGGCCGAGCAGAAGAAGGAGAAGCTCGAGAACGAGCTCAATGCCTACAAGGGTTCTGCTATCTTTAATGACAAATCTGATCAAAGAAAGCATAAGAATGGGTTACAATGATTTTGGAGATTTTTATTATGCTCATGGTCAACTTGGGGATGCTTTTAAAAATTACGTTCGGACTCGTGATTATTGCATTACGTCAAAGCATATTGTTCACATGTGCATGAGTTCAACTTTGGTCAGCATTGAGATGGGTCAATTTACTCATGTCACAAGCTATATTACCAAAGCAGAACAAATACCAGAAGCCCTTGACCCAGTCACTGTTGCTAAACTTCGTTGTGCTGCTGGCTTGGCTCAATTGGAATCTAAAAAGTACAAACTTGCTGCTCGTAAGTTCTTGGAAACCGGGCCTGAATTGGGAAATCACTACAATGAAGTGATTGCTCCTCAAGATGTAACAACATATGGTGGGCTTTGTGCCCTTGCAACTTTTGACCGCATGGAACTGAAGGCATATATTCTTTCTTTCCTTTCAACTATCTCTCCCTTTGATCTTTTGGGTTTTTTTTGTTCAGAAGTACAACACTCTTTCTCAGTAAATGATTTTATATTACAGAACAAAGTTATAGACAACCTGAATTTCAGGAATTTTTTAGAGTTGGTACCTGAAGTCAGGGAGCTTATCAATGATTTTTACACAAGCCATTATGCTTCATGCCTGGATTACCTTGGGAATCTCAAAGCAAATCTGCTGCTTGACATCCATTTACATGATCACCTTGAGACACTCTATGGCCAGATCCGCCACAAGGCCCTCATCCAGTATATGCACCCCTTTGTATCGGTAGATTTAAACATGATGGCCAATGCGTTCAAAACTGATGTTGCAGGGCTGGAGAAAGAACTTGAAGCTTTGATCACTGACAACCAAGTCCAGGCTAAAATTGACTCGCAGAACAAAATCCTCTATGCACGGCATGCAGATCAAAGGAATGCAACTTTTCAACGGGTGCTACAGATAGGGAATGAGTTTGATCGGGATGTTAAGTCGATGCTGCTTAGGGTAAATCTCATAAAGCACGAGTACAATCTCAGGGCAGCGAGGAAGCACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000338 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006464 GO:0006508 GO:0006807 GO:0006950 GO:0006970 GO:0006972 GO:0007275 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009628 GO:0009642 GO:0009646 GO:0009651 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0019538 GO:0022414 GO:0032501 GO:0032502 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0061458 GO:0070646 GO:0070647 GO:0071704 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PCI RPN7

Protein Analysis

487

Amino Acids

55.72

Weight (kDa)

6.66

Isoelectric Point (pI)

45.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RPN7	PF10602	139 - 287	6.8e-46	26S proteasome subunit RPN7
PCI	PF01399	362 - 441	7.6e-17	PCI domain
CSN1_C	PF21151	445 - 470	7.9e-10	COP9 signalosome complex subunit 1, C-terminal helix

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015176)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G61140
fragaria_vesca	FvH4_7g13330
malus_domestica	MD01G1050400.v1.1 MD07G1127800.v1.1
prunus_persica	Prupe.2G156700_v2.0.a1
pyrus_communis	pycom07g12320
rosa_chinensis	RchiOBHm_Chr1g0352641 RchiOBHm_Chr7g0198471
rosa_laevigata	RLG00000028324
rosa_multiflora	Rmu_sc0005118.1_g000005
rosa_roxburghii	Rroxscaffold_4G00302520
rosa_rugosa	Rorug01G0230400
rosa_samantha	Rh1AG243700 Rh1BG214300 Rh1CG227700 Rh1DG240400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1277
Acc65I	GGTACC	1 cut(s)	1009
AccB1I	GGYRCC	1 cut(s)	1009
AccB7I	CCANNNNNTGG	1 cut(s)	205
AccII	CGCG	2 cut(s)	131, 340
AciI	CCGC	5 cut(s)	144, 251, 340, 844, 1150
AclWI	GGATC	1 cut(s)	1141
AcoI	YGGCCR	4 cut(s)	67, 145, 1141, 1209
AcsI	RAATTY	2 cut(s)	985, 994
AcuI	CTGAAG	2 cut(s)	875, 1035
AfaI	GTAC	7 cut(s)	140, 151, 233, 722, 927, 1011, 1433
AfiI	CCNNNNNNNGG	6 cut(s)	183, 205, 313, 764, 1156, 1282
AflIII	ACRYGT	1 cut(s)	561
AgsI	TTSAA	5 cut(s)	576, 882, 1222, 1256, 1352
AjiI	CACGTC	1 cut(s)	324
AjnI	CCWGG	3 cut(s)	198, 1065, 1281
AluBI	AGCT	5 cut(s)	375, 387, 621, 1027, 1259
AluI	AGCT	5 cut(s)	375, 387, 621, 1027, 1259
Alw21I	GWGCWC	1 cut(s)	389
Alw26I	GTCTC	2 cut(s)	11, 1124
AlwI	GGATC	1 cut(s)	1141
AlwNI	CAGNNNCTG	1 cut(s)	668
Ama87I	CYCGRG	2 cut(s)	307, 376
AoxI	GGCC	9 cut(s)	67, 123, 145, 304, 353, 755, 1141, 1158, 1209
ApaI	GGGCCC	1 cut(s)	308
ApeKI	GCWGC	6 cut(s)	84, 689, 731, 1099, 1402, 1445
ApoI	RAATTY	2 cut(s)	985, 994
Asp718I	GGTACC	1 cut(s)	1009
AspLEI	GCGC	1 cut(s)	84
AspS9I	GGNCC	6 cut(s)	26, 304, 305, 353, 755, 1159
AsuC2I	CCSGG	1 cut(s)	754
AsuHPI	GGTGA	2 cut(s)	166, 1115
AvaI	CYCGRG	2 cut(s)	307, 376
AvaII	GGWCC	1 cut(s)	26
BaeGI	GKGCMC	2 cut(s)	308, 829
BalI	TGGCCA	2 cut(s)	1143, 1211
BanI	GGYRCC	1 cut(s)	1009
BanII	GRGCYC	2 cut(s)	308, 389
BauI	CACGAG	2 cut(s)	525, 1427
Bbv12I	GWGCWC	1 cut(s)	389
BbvI	GCAGC	6 cut(s)	96, 676, 718, 1086, 1389, 1457
BccI	CCATC	2 cut(s)	589, 1201
BceAI	ACGGC	3 cut(s)	82, 132, 1337
BcgI	CGANNNNNNTGC	2 cut(s)	373, 407
BciT130I	CCWGG	3 cut(s)	200, 1067, 1283
BclI	TGATCA	3 cut(s)	429, 1120, 1263
BcnI	CCSGG	1 cut(s)	754
BcoDI	GTCTC	2 cut(s)	11, 1124
BfmI	CTRYAG	1 cut(s)	1361
BglII	AGATCT	1 cut(s)	45
BisI	GCNGC	7 cut(s)	85, 145, 690, 732, 1100, 1403, 1446
BlsI	GCNGC	7 cut(s)	86, 146, 691, 733, 1101, 1404, 1447
Bme1390I	CCNGG	4 cut(s)	200, 754, 1067, 1283
Bme18I	GGWCC	1 cut(s)	26
BmeT110I	CYCGRG	2 cut(s)	307, 376
BmgBI	CACGTC	1 cut(s)	324
BmgT120I	GGNCC	6 cut(s)	26, 304, 305, 353, 755, 1159
BmiI	GGNNCC	4 cut(s)	27, 188, 306, 1011
BmrFI	CCNGG	4 cut(s)	200, 754, 1067, 1283
BmrI	ACTGGG	2 cut(s)	256, 656
BmsI	GCATC	2 cut(s)	490, 1389
BmuI	ACTGGG	2 cut(s)	256, 656
BpmI	CTGGAG	1 cut(s)	1262
Bpu10I	CCTNAGC	1 cut(s)	1406
BpuEI	CTTGAG	2 cut(s)	780, 1148
BpuMI	CCSGG	1 cut(s)	754
BsaJI	CCNNGG	1 cut(s)	1075
BsaXI	ACNNNNNCTCC	2 cut(s)	874, 904
Bsc4I	CCNNNNNNNGG	6 cut(s)	183, 205, 313, 764, 1156, 1282
Bse1I	ACTGG	3 cut(s)	262, 662, 1168
BseBI	CCWGG	3 cut(s)	200, 1067, 1283
BseDI	CCNNGG	1 cut(s)	1075
BseGI	GGATG	4 cut(s)	505, 1107, 1164, 1393
BseLI	CCNNNNNNNGG	6 cut(s)	183, 205, 313, 764, 1156, 1282
BseMII	CTCAG	2 cut(s)	954, 1453
BseNI	ACTGG	3 cut(s)	262, 662, 1168
BseRI	GAGGAG	2 cut(s)	199, 783
BseSI	GKGCMC	2 cut(s)	308, 829
BseX3I	CGGCCG	1 cut(s)	145
BseXI	GCAGC	6 cut(s)	96, 676, 718, 1086, 1389, 1457
BsgI	GTGCAG	1 cut(s)	302
Bsh1236I	CGCG	2 cut(s)	131, 340
Bsh1285I	CGRYCG	2 cut(s)	92, 148
BshFI	GGCC	9 cut(s)	69, 125, 147, 306, 355, 757, 1143, 1160, 1211
BshNI	GGYRCC	1 cut(s)	1009
BsiEI	CGRYCG	2 cut(s)	92, 148
BsiHKAI	GWGCWC	1 cut(s)	389
BsiHKCI	CYCGRG	2 cut(s)	307, 376
BsiSI	CCGG	1 cut(s)	753
BsiWI	CGTACG	1 cut(s)	231
BslFI	GGGAC	1 cut(s)	39
BslI	CCNNNNNNNGG	6 cut(s)	183, 205, 313, 764, 1156, 1282
BsmAI	GTCTC	2 cut(s)	11, 1124
BsmFI	GGGAC	1 cut(s)	39
BsmI	GAATGC	1 cut(s)	1345
BsnI	GGCC	9 cut(s)	69, 125, 147, 306, 355, 757, 1143, 1160, 1211
BsoBI	CYCGRG	2 cut(s)	307, 376
Bsp120I	GGGCCC	1 cut(s)	304
Bsp1286I	GDGCHC	3 cut(s)	308, 389, 829
Bsp1407I	TGTACA	1 cut(s)	138
BspACI	CCGC	5 cut(s)	144, 251, 340, 844, 1150
BspANI	GGCC	9 cut(s)	69, 125, 147, 306, 355, 757, 1143, 1160, 1211
BspCNI	CTCAG	2 cut(s)	953, 1452
BspFNI	CGCG	2 cut(s)	131, 340
BspLI	GGNNCC	4 cut(s)	27, 188, 306, 1011
BspPI	GGATC	1 cut(s)	1141
BspQI	GCTCTTC	1 cut(s)	225
BspT107I	GGYRCC	1 cut(s)	1009
BsrGI	TGTACA	1 cut(s)	138
BsrI	ACTGG	3 cut(s)	262, 662, 1168
BssECI	CCNNGG	1 cut(s)	1075
BssSI	CACGAG	2 cut(s)	525, 1427
BssT1I	CCWWGG	1 cut(s)	1075
Bst2BI	CACGAG	2 cut(s)	525, 1427
Bst2UI	CCWGG	3 cut(s)	200, 1067, 1283
Bst4CI	ACNGT	2 cut(s)	178, 670
Bst6I	CTCTTC	1 cut(s)	225
BstAPI	GCANNNNNTGC	1 cut(s)	1325
BstAUI	TGTACA	1 cut(s)	138
BstC8I	GCNNGC	4 cut(s)	107, 133, 694, 1326
BstDEI	CTNAG	3 cut(s)	940, 1406, 1439
BstF5I	GGATG	4 cut(s)	505, 1107, 1164, 1393
BstFNI	CGCG	2 cut(s)	131, 340
BstHHI	GCGC	1 cut(s)	84
BstMAI	GTCTC	2 cut(s)	11, 1124
BstMCI	CGRYCG	2 cut(s)	92, 148
BstMWI	GCNNNNNNNGC	5 cut(s)	66, 141, 698, 1149, 1325
BstNI	CCWGG	3 cut(s)	200, 1067, 1283
BstNSI	RCATGY	2 cut(s)	565, 1328
BstSCI	CCNGG	4 cut(s)	198, 752, 1065, 1281
BstSFI	CTRYAG	1 cut(s)	1361
BstSLI	GKGCMC	2 cut(s)	308, 829
BstUI	CGCG	2 cut(s)	131, 340
BstV1I	GCAGC	6 cut(s)	96, 676, 718, 1086, 1389, 1457
BstX2I	RGATCY	2 cut(s)	45, 1146
BstYI	RGATCY	2 cut(s)	45, 1146
BstZI	CGGCCG	1 cut(s)	145
BsuRI	GGCC	9 cut(s)	69, 125, 147, 306, 355, 757, 1143, 1160, 1211
BtgZI	GCGATG	1 cut(s)	24
BtrI	CACGTC	1 cut(s)	324
BtsCI	GGATG	4 cut(s)	505, 1107, 1164, 1393
BtsIMutI	CAGTG	3 cut(s)	666, 1266, 1456
Cac8I	GCNNGC	4 cut(s)	107, 133, 694, 1326
CaiI	CAGNNNCTG	1 cut(s)	668
CfoI	GCGC	1 cut(s)	84
Cfr13I	GGNCC	6 cut(s)	26, 304, 305, 353, 755, 1159
CseI	GACGC	1 cut(s)	346
Csp6I	GTAC	7 cut(s)	139, 150, 232, 721, 926, 1010, 1432
CviQI	GTAC	7 cut(s)	139, 150, 232, 721, 926, 1010, 1432
DdeI	CTNAG	3 cut(s)	940, 1406, 1439
DraI	TTTAAA	2 cut(s)	508, 1200
DrdI	GACNNNNNNGTC	1 cut(s)	1277
DseDI	GACNNNNNNGTC	1 cut(s)	1277
EaeI	YGGCCR	4 cut(s)	67, 145, 1141, 1209
EagI	CGGCCG	1 cut(s)	145
Eam1104I	CTCTTC	1 cut(s)	225
EarI	CTCTTC	1 cut(s)	225
EciI	GGCGGA	2 cut(s)	266, 1139
Ecl136II	GAGCTC	1 cut(s)	387
EclXI	CGGCCG	1 cut(s)	145
Eco130I	CCWWGG	1 cut(s)	1075
Eco147I	AGGCCT	1 cut(s)	125
Eco24I	GRGCYC	2 cut(s)	308, 389
Eco32I	GATATC	1 cut(s)	118
Eco47I	GGWCC	1 cut(s)	26
Eco52I	CGGCCG	1 cut(s)	145
Eco53kI	GAGCTC	1 cut(s)	387
Eco57I	CTGAAG	2 cut(s)	875, 1035
Eco88I	CYCGRG	2 cut(s)	307, 376
EcoICRI	GAGCTC	1 cut(s)	387
EcoO109I	RGGNCCY	1 cut(s)	1159
EcoRII	CCWGG	3 cut(s)	198, 1065, 1281
EcoRV	GATATC	1 cut(s)	118
EcoT14I	CCWWGG	1 cut(s)	1075
EcoT38I	GRGCYC	2 cut(s)	308, 389
ErhI	CCWWGG	1 cut(s)	1075
FaqI	GGGAC	1 cut(s)	39
FauNDI	CATATG	1 cut(s)	811
FbaI	TGATCA	3 cut(s)	429, 1120, 1263
Fnu4HI	GCNGC	7 cut(s)	85, 145, 690, 732, 1100, 1403, 1446
FokI	GGATG	4 cut(s)	512, 1094, 1151, 1400
FriOI	GRGCYC	2 cut(s)	308, 389
Fsp4HI	GCNGC	7 cut(s)	85, 145, 690, 732, 1100, 1403, 1446
GlaI	GCGC	1 cut(s)	83
GluI	GCNGC	7 cut(s)	85, 145, 690, 732, 1100, 1403, 1446
GsuI	CTGGAG	1 cut(s)	1262
HaeIII	GGCC	9 cut(s)	69, 125, 147, 306, 355, 757, 1143, 1160, 1211
HapII	CCGG	1 cut(s)	753
HgaI	GACGC	1 cut(s)	346
HhaI	GCGC	1 cut(s)	84
Hin6I	GCGC	1 cut(s)	82
HinP1I	GCGC	1 cut(s)	82
HincII	GTYRAC	1 cut(s)	491
HindII	GTYRAC	1 cut(s)	491
HindIII	AAGCTT	1 cut(s)	1257
HinfI	GANTC	4 cut(s)	523, 710, 1081, 1295
HpaII	CCGG	1 cut(s)	753
HphI	GGTGA	2 cut(s)	166, 1115
Hpy166II	GTNNAC	3 cut(s)	64, 491, 559
Hpy188I	TCNGA	3 cut(s)	429, 522, 922
Hpy188III	TCNNGA	8 cut(s)	24, 181, 244, 378, 527, 797, 991, 1385
Hpy8I	GTNNAC	3 cut(s)	64, 491, 559
Hpy99I	CGWCG	5 cut(s)	41, 44, 182, 239, 340
HpyAV	CCTTC	3 cut(s)	241, 360, 850
HpyCH4III	ACNGT	2 cut(s)	178, 670
HpyCH4IV	ACGT	3 cut(s)	323, 516, 542
HpyF10VI	GCNNNNNNNGC	5 cut(s)	66, 141, 698, 1149, 1325
HpyF3I	CTNAG	3 cut(s)	940, 1406, 1439
HpySE526I	ACGT	3 cut(s)	323, 516, 542
HspAI	GCGC	1 cut(s)	82
KpnI	GGTACC	1 cut(s)	1013
Ksp22I	TGATCA	3 cut(s)	429, 1120, 1263
LguI	GCTCTTC	1 cut(s)	225
LmnI	GCTCC	3 cut(s)	186, 796, 1024
Lsp1109I	GCAGC	6 cut(s)	96, 676, 718, 1086, 1389, 1457
LweI	GCATC	2 cut(s)	490, 1389
MaeII	ACGT	3 cut(s)	323, 516, 542
MaeIII	GTNAC	4 cut(s)	452, 613, 664, 802
MboII	GAAGA	3 cut(s)	212, 298, 375
MfeI	CAATTG	1 cut(s)	704
MflI	RGATCY	2 cut(s)	45, 1146
MhlI	GDGCHC	3 cut(s)	308, 389, 829
MlsI	TGGCCA	2 cut(s)	1143, 1211
MluCI	AATT	8 cut(s)	110, 511, 602, 704, 761, 985, 994, 1290
MluNI	TGGCCA	2 cut(s)	1143, 1211
MlyI	GAGTC	2 cut(s)	517, 1289
MmeI	TCCRAC	1 cut(s)	192
MnlI	CCTC	9 cut(s)	176, 177, 208, 268, 344, 804, 1172, 1322, 1443
Mox20I	TGGCCA	2 cut(s)	1143, 1211
MscI	TGGCCA	2 cut(s)	1143, 1211
MseI	TTAA	4 cut(s)	416, 507, 1199, 1392
MslI	CAYNNNNRTG	5 cut(s)	446, 566, 593, 777, 1116
Msp20I	TGGCCA	2 cut(s)	1143, 1211
MspA1I	CMGCKG	1 cut(s)	144
MspI	CCGG	1 cut(s)	753
MspR9I	CCNGG	4 cut(s)	200, 754, 1067, 1283
MunI	CAATTG	1 cut(s)	704
Mva1269I	GAATGC	1 cut(s)	1345
MvaI	CCWGG	3 cut(s)	200, 1067, 1283
MvnI	CGCG	2 cut(s)	131, 340
MwoI	GCNNNNNNNGC	5 cut(s)	66, 141, 698, 1149, 1325
NciI	CCSGG	1 cut(s)	754
NdeI	CATATG	1 cut(s)	811
NlaIV	GGNNCC	4 cut(s)	27, 188, 306, 1011
NmeAIII	GCCGAG	1 cut(s)	381
NmuCI	GTSAC	2 cut(s)	613, 664
NspI	RCATGY	2 cut(s)	565, 1328
PaeI	GCATGC	1 cut(s)	1328
PaeR7I	CTCGAG	1 cut(s)	376
PceI	AGGCCT	1 cut(s)	125
PciI	ACATGT	1 cut(s)	561
PciSI	GCTCTTC	1 cut(s)	225
PcsI	WCGNNNNNNNCGW	1 cut(s)	72
PctI	GAATGC	1 cut(s)	1345
PfeI	GAWTC	2 cut(s)	710, 1081
Pfl23II	CGTACG	1 cut(s)	231
PflFI	GACNNNGTC	1 cut(s)	662
PflMI	CCANNNNNTGG	1 cut(s)	205
PkrI	GCNGC	7 cut(s)	86, 146, 691, 733, 1101, 1404, 1447
PleI	GAGTC	2 cut(s)	517, 1289
PpsI	GAGTC	2 cut(s)	517, 1289
PscI	ACATGT	1 cut(s)	561
Psp124BI	GAGCTC	1 cut(s)	389
Psp6I	CCWGG	3 cut(s)	198, 1065, 1281
PspGI	CCWGG	3 cut(s)	198, 1065, 1281
PspLI	CGTACG	1 cut(s)	231
PspN4I	GGNNCC	4 cut(s)	27, 188, 306, 1011
PspOMI	GGGCCC	1 cut(s)	304
PspPI	GGNCC	6 cut(s)	26, 304, 305, 353, 755, 1159
PstNI	CAGNNNCTG	1 cut(s)	668
PsuI	RGATCY	2 cut(s)	45, 1146
PsyI	GACNNNGTC	1 cut(s)	662
RsaI	GTAC	7 cut(s)	140, 151, 233, 722, 927, 1011, 1433
RsaNI	GTAC	7 cut(s)	139, 150, 232, 721, 926, 1010, 1432
RseI	CAYNNNNRTG	5 cut(s)	446, 566, 593, 777, 1116
SacI	GAGCTC	1 cut(s)	389
SapI	GCTCTTC	1 cut(s)	225
SaqAI	TTAA	4 cut(s)	416, 507, 1199, 1392
SatI	GCNGC	7 cut(s)	85, 145, 690, 732, 1100, 1403, 1446
Sau96I	GGNCC	6 cut(s)	26, 304, 305, 353, 755, 1159
SchI	GAGTC	2 cut(s)	517, 1289
ScrFI	CCNGG	4 cut(s)	200, 754, 1067, 1283
SduI	GDGCHC	3 cut(s)	308, 389, 829
SfaNI	GCATC	2 cut(s)	490, 1389
SfcI	CTRYAG	1 cut(s)	1361
Sfr274I	CTCGAG	1 cut(s)	376
SinI	GGWCC	1 cut(s)	26
SlaI	CTCGAG	1 cut(s)	376
SmiMI	CAYNNNNRTG	5 cut(s)	446, 566, 593, 777, 1116
SmlI	CTYRAG	3 cut(s)	376, 795, 1127
SmoI	CTYRAG	3 cut(s)	376, 795, 1127
SphI	GCATGC	1 cut(s)	1328
Sse9I	AATT	8 cut(s)	110, 511, 602, 704, 761, 985, 994, 1290
SseBI	AGGCCT	1 cut(s)	125
SsiI	CCGC	5 cut(s)	144, 251, 340, 844, 1150
SstI	GAGCTC	1 cut(s)	389
StuI	AGGCCT	1 cut(s)	125
StyD4I	CCNGG	4 cut(s)	198, 752, 1065, 1281
StyI	CCWWGG	1 cut(s)	1075
TaaI	ACNGT	2 cut(s)	178, 670
TaiI	ACGT	3 cut(s)	326, 519, 545
TaqI	TCGA	6 cut(s)	36, 114, 180, 298, 377, 1397
TaqII	GACCGA	1 cut(s)	106
TasI	AATT	8 cut(s)	110, 511, 602, 704, 761, 985, 994, 1290
TatI	WGTACW	4 cut(s)	138, 720, 925, 1431
TauI	GCSGC	1 cut(s)	147
TfiI	GAWTC	2 cut(s)	710, 1081
Tru1I	TTAA	4 cut(s)	416, 507, 1199, 1392
Tru9I	TTAA	4 cut(s)	416, 507, 1199, 1392
TscAI	CASTG	2 cut(s)	673, 1273
TseFI	GTSAC	2 cut(s)	613, 664
TseI	GCWGC	6 cut(s)	84, 689, 731, 1099, 1402, 1445
Tsp45I	GTSAC	2 cut(s)	613, 664
TspDTI	ATGAA	2 cut(s)	795, 1050
TspRI	CASTG	2 cut(s)	673, 1273
Tth111I	GACNNNGTC	1 cut(s)	662
Van91I	CCANNNNNTGG	1 cut(s)	205
VpaK11BI	GGWCC	1 cut(s)	26
XapI	RAATTY	2 cut(s)	985, 994
XceI	RCATGY	2 cut(s)	565, 1328
XhoI	CTCGAG	1 cut(s)	376

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.